CmaCh04G018670 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G018670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Peptide chain release factor, putative
Location	Cma_Chr04 : 9498763 .. 9503019 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATCCATCGACCAACTGTGCGGCTTCTTGAACAAATCCGAACACTTGCCTTACATTGCCGCACGAATCCTGCGCAAATCTGTACAAATCCGTTGCTTCCGCCACCATCCGACCTTCTTTCTACTCCGTCTGTTCGTTTCTATTCCAAAGGTTCTTATCTTTCTTCCCTTTTTTCAATCCTTTTCTTTGTTTTCTTCGTTATCACGGCTTTGGCTCAGACACGGATTTATTGGGTTAGGTCTCTTCCACATTTTACATTGGATGCTGTGGATTACTTCTTCATTTGAATTATGAAATGTAGAATTGAGTTCTGTATTATTTATTGGCTATTACCTTTTGAATGAAATCTTTGTTTGTATCTTTCGATGCTTGGCCTCCTATAATCTGAACATCTCTTCAAACTTGTTTAAAATAGGCGAAGTACAAACGCAACAGCTATCAATGGAGCTTATCAAGATAATGGAACAAAGGTTGAGGGCCATTGAGCTCAGGAGCACTTTTCTTCTGAATATAATCAACCGGGTACCACTTATTCTCACTTTTTTATGCCCTCTCCTTTGCTGTACAGACATCACGCAGCTTCAGAATTTTGTTTAAGTTAACATATTAAAAGTTGTACAACAAATCGAATGAGATAAAATATGATCTTATGAAACTTCATAATATCCATATTCTACCTTAGCCTTCCCGCCTAGAAGCTGTAATTCTCACACATTTGGAAGATAAATAGGTTTGGAGATTAGACAGCAGTGACACATTCACAACCAATTCTTTCCTCCTTGACTAAAACATTATTGCTGAAGAGAAACAACCCTTTTACTATCGTATTCAATTTGGATAGACCCATATTTTGTAACGGCCCAAGCCCACCGCTAACAAATATTGTCTCTTTGAGCTTTTCCTTTCGGGTAGTTTCTTTCTCTTCCCCAACCAATGTAGGATCTCACAATCCACCCTTTCAGGGCCCAATATCCTCACTAGCACTCTTTCCATTCTTCAATCGATGTGGGATCCCCAATCCACCCCCTTACTAGCACACCGCCTTGTGTCCACCTTCCTTTGGGGCTCAGCCTCCTTGCTGGCACATCACCCGGTGTCTGGCTCGGATACCATTTGTAACGGTCCAAGCCCACCGCTAATAGATATTGTCCTCTTTGAGCTTTCCCTTTCGGGTTTCCTCTCAAGGTTTTTAAAACATGTCTGTTAGGGAGAGGTTTCCACCCCTTATAAAGGATGTTTTGTTCTCCTCTCCAACCGACGTGGGATGTCACATATTCTTTCTTTGGAAGCTTGCTCATAATGTTGCAATACCCATGACCTCTTACAGCAGCCTATGCCATATTCATCAATCTCGCTTCAATGCAAGAATGAAGCTGAATCTCAGTCACAAGACTTGCTTTCTCGCTCTTTGGAATGATATGCTCTCTTCCTTTGGTTGGTCACTGGCTTTACGACGTAATCTCAAGGGTTTCCTCTTATTCCTCTCCCAGAACACCCCTTCTGAAAGGAGAAGAAAACCCTTTAGATAAACATAATTAGAGCTTTCTTTTGGGCAATTTGGATTTAAAGGAATCATTGGCTTCTTTTCGAGAAAGAACCTTGCAGCTGGATTCTTCAGAAAATAGTTGTCTTAGCTATCTCGTAGTATAAATTTTCTTTCTTCTTAATTCTCGTAGTTATGTCTCTCTTTGTTCAGCAAATTTTTTCTTATCATAAAAGGAAAATAATCAAATAAATATAGAAAATTTTAGCTTTCCAACCCTTCCTACTCTTCCTTTTCTCCGGTATCCCTTTCTCTTATAATTACAGACCTTAAATGATGATTTAATTTTCTTTACTCATGGTGTTATTTGAACATAGCCAGAAGCCCCACCGTCCGAGTATGCAAAGGCTAACAAGGAGCTTAAGAAACTCAGAGATACGATGGATCTAATAAATGAGTTGAGGTCTAGACAGAAGGTATGAAATACATTCAACACAGTATCTTTATTTACAATATGAACTGCTTAAGATGTTATCTATGAAAAGGTTAAGAGATGACTGAATTATTTCCTTTCGGTGCAAAGACGACCTCTGTTCATGCTGTTCTTTCACAATCATCTACTAATTTGCTGTTTCTTTGACTTGGTTGTTCAAACTCCAAAATGTTCTGAATACAACTTGTGTGGGTGTTTTTGTTTTACAATGAGATTGTAGACGCCTATCGGAATTCTTGTAAGTGGACTGACTTGGAGGCATCCGCTTCCCCAATGAATGAAATGTGTGTTGTTGCCGTACTATTTACAGAAGGATATCAGAAATTTTTTACGACTGTTTTGGCTGTAGGAAATTAATGGTTTGAGAACGCTGATGGACGAATGCCCAGAGGATAAAGATATGCTTGATATGGCTACGGAGGAATTAAATCAGGCAGTTGAAGAAGAGAAAAGATTACAGCACTCATTGCTCACGTCGTTACTTCCTAGAGATGATGCTGATGAGAGGGGTTGCATCTTGGAGGTGAGAGCAGGTAGGTAATGGTGCATATTAGTGAACGTAGCCATTAATGAGGTTTTTTTTTTTTTTTTTTGTTGAGAATAGGAATTTTTCTGTTCTCTTTTTCTCCGTTTCCGATCTCGATAGTTATAACTAATAGAAAGTTTTACCAGGAACTGGTGGAGAAGAAGCTTCTTTGTTTGCCATGGATATATTCAAAATGTGAGTGACAGTTTGCATAGCATGCTTAGTATCACTGCTTAGTTCTCAAGAGTTATTTACTTCGGATCAAAATAGGTATGAGCGATACGCACAGAAGAAAGGTTGGAAGTTTGAGGTGGTTGACATAACAGAATCGGATCTTAAAGGATATAAGGTGAATTCATTAGCAAATTTTTTAGTTCAACAATGTATGGGGTAAAAGATTCGAACCTTTGACCTAGAGTATATGTTTAATTTCTTCGAAGATAAATACAGGATTTATCATCCTACTTTGTAGGAAGCGGTTGCTGCAATATCAGGAGCCGGTGTGTATGGGAAACTTAAATTTGAGAGTGGAATTCACCGAGTACAGGTCTTCTCTCAACATGCATATCAATAGCCTTTAGCATTTTTACCATTGTGAAATGATAATTGAAACCATTCTCTTCCTTGGGCAGCGAGTTCCTGTGACAGAGAAGTCTGGGCGTGTTCATACCAGTGCTGTTTCTGTAGCCATTCTCCCTCAAGCAGACGAGGTTCCAACCCTTCTCGCTTGACGCTTTGAAGCCACTTTCTTCCTAGAAAATTAATATCCATAGTAATTTAGGCAAGGGATTGATTCTAAGTTTGGTTGTGATATTGTTGAGGGAATGTGCAGGTAGATGTTGAGTTGAAGAACGAGGACCTGAGAATAGATACATTCAGATCAGGCGGTTCAGGAGGTCAGCATGCAAATACCACAAATAGTGCCGTTAGAGTGACTCACATTCCAACTGGGTTGACTGTGTCCATACAAGACGAGCGATCCCAACATATGGTAGGAACAGTTTCGTTTCTATTGCTTGTATGATTTTGATGGGGTATTTCTGTTTGGTTTAACTTGTTTGAGTGTGCTTTCTTTGGTTCAAACAGAACAAGGCAAAGGCGCTTAAAGTTATATGTGCAAAGCTATACGAAATTGAAAGACGCAGGATTCAGAGCAGTCGGTCAAAGCTTCGATCGGAACAGGTAATAAGAAAGAGATTGATGTATGATGTTTATGGTTACTGTGTTGAAAGAAAATACTAAAGGAAGTGAGTTTGGATTATAAAAAGCAGATTGGTAGCGGGGACAGATCGGAACGCATTCGCACATACAACTTCCCGCAAGGGCGGGTAACAGACCATCGGGTAGGCATTACAGAGCATGCCATTGAGGAGGTGATGCAGGGACAGAATCTGGATATGTTCGTGGACGCTCTGTTATTGCAGCAGGAAATGGATGCAATTGCATCCTTCACTTCCTCTTCTTCGTAGTGGCTGTGGTAGTGAAGAGGAGGAGCATTGCATCAAATAGGATCTGCCCACTTCGCATTAGATTCAGGTAACATAAGAAATGTGTTTCTTACAGAAGTACAATACAAGTAGAATGGGTGGGTTACAATACAACTTTAAAGGGATTAAATTTCATATATGTTACAATGATGAGTAGTATGTAGGAGTTCGTTTCTGTTCGATACAACATAATTGTAACAGTTCAGACCCACCGCTAGTAGATATTGTCCTCTTTGGATTTTCCCTTTCATAAAACATACTTTT

mRNA sequence

ATGAGAATCCATCGACCAACTGTGCGGCTTCTTGAACAAATCCGAACACTTGCCTTACATTGCCGCACGAATCCTGCGCAAATCTGTACAAATCCGTTGCTTCCGCCACCATCCGACCTTCTTTCTACTCCGTCTGTTCGTTTCTATTCCAAAGGCGAAGTACAAACGCAACAGCTATCAATGGAGCTTATCAAGATAATGGAACAAAGGTTGAGGGCCATTGAGCTCAGGAGCACTTTTCTTCTGAATATAATCAACCGGCCAGAAGCCCCACCGTCCGAGTATGCAAAGGCTAACAAGGAGCTTAAGAAACTCAGAGATACGATGGATCTAATAAATGAGTTGAGGTCTAGACAGAAGGAAATTAATGGTTTGAGAACGCTGATGGACGAATGCCCAGAGGATAAAGATATGCTTGATATGGCTACGGAGGAATTAAATCAGGCAGTTGAAGAAGAGAAAAGATTACAGCACTCATTGCTCACGTCGTTACTTCCTAGAGATGATGCTGATGAGAGGGGTTGCATCTTGGAGGTGAGAGCAGGAACTGGTGGAGAAGAAGCTTCTTTGTTTGCCATGGATATATTCAAAATGTATGAGCGATACGCACAGAAGAAAGGTTGGAAGTTTGAGGTGGTTGACATAACAGAATCGGATCTTAAAGGATATAAGGTGAATTCATTAGCAAATTTTTTAGTTCAACAATGTATGGGGTAAAAGATTCGAACCTTTGACCTAGAGTATATGTTTAATTTCTTCGAAGATAAATACAGGATTTATCATCCTACTTTGTAGGAAGCGGTTGCTGCAATATCAGGAGCCGGTGTGTATGGGAAACTTAAATTTGAGAGTGGAATTCACCGAGTACAGCGAGTTCCTGTGACAGAGAAGTCTGGGCGTGTTCATACCAGTGCTGTTTCTGTAGCCATTCTCCCTCAAGCAGACGAGGTAGATGTTGAGTTGAAGAACGAGGACCTGAGAATAGATACATTCAGATCAGGCGGTTCAGGAGGTCAGCATGCAAATACCACAAATAGTGCCGTTAGAGTGACTCACATTCCAACTGGGTTGACTGTGTCCATACAAGACGAGCGATCCCAACATATGAACAAGGCAAAGGCGCTTAAAGTTATATGTGCAAAGCTATACGAAATTGAAAGACGCAGGATTCAGAGCAGTCGGTCAAAGCTTCGATCGGAACAGATTGGTAGCGGGGACAGATCGGAACGCATTCGCACATACAACTTCCCGCAAGGGCGGGTAACAGACCATCGGGTAGGCATTACAGAGCATGCCATTGAGGAGGTGATGCAGGGACAGAATCTGGATATGTTCGTGGACGCTCTGTTATTGCAGCAGGAAATGGATGCAATTGCATCCTTCACTTCCTCTTCTTCGTAGTGGCTGTGGTAGTGAAGAGGAGGAGCATTGCATCAAATAGGATCTGCCCACTTCGCATTAGATTCAGGTAACATAAGAAATGTGTTTCTTACAGAAGTACAATACAAGTAGAATGGGTGGGTTACAATACAACTTTAAAGGGATTAAATTTCATATATGTTACAATGATGAGTAGTATGTAGGAGTTCGTTTCTGTTCGATACAACATAATTGTAACAGTTCAGACCCACCGCTAGTAGATATTGTCCTCTTTGGATTTTCCCTTTCATAAAACATACTTTT

Coding sequence (CDS)

ATGAGAATCCATCGACCAACTGTGCGGCTTCTTGAACAAATCCGAACACTTGCCTTACATTGCCGCACGAATCCTGCGCAAATCTGTACAAATCCGTTGCTTCCGCCACCATCCGACCTTCTTTCTACTCCGTCTGTTCGTTTCTATTCCAAAGGCGAAGTACAAACGCAACAGCTATCAATGGAGCTTATCAAGATAATGGAACAAAGGTTGAGGGCCATTGAGCTCAGGAGCACTTTTCTTCTGAATATAATCAACCGGCCAGAAGCCCCACCGTCCGAGTATGCAAAGGCTAACAAGGAGCTTAAGAAACTCAGAGATACGATGGATCTAATAAATGAGTTGAGGTCTAGACAGAAGGAAATTAATGGTTTGAGAACGCTGATGGACGAATGCCCAGAGGATAAAGATATGCTTGATATGGCTACGGAGGAATTAAATCAGGCAGTTGAAGAAGAGAAAAGATTACAGCACTCATTGCTCACGTCGTTACTTCCTAGAGATGATGCTGATGAGAGGGGTTGCATCTTGGAGGTGAGAGCAGGAACTGGTGGAGAAGAAGCTTCTTTGTTTGCCATGGATATATTCAAAATGTATGAGCGATACGCACAGAAGAAAGGTTGGAAGTTTGAGGTGGTTGACATAACAGAATCGGATCTTAAAGGATATAAGGTGAATTCATTAGCAAATTTTTTAGTTCAACAATGTATGGGGTAA

Protein sequence

MRIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSVRFYSKGEVQTQQLSMELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKEINGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLANFLVQQCMG

Homology

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BLAST of CmaCh04G018670 vs. Swiss-Prot
Match: RF1_RHORT (Peptide chain release factor 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=prfA PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 66/163 (40.49%), Postives = 101/163 (61.96%), Query Frame = 1


Query: 67  MEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKEINGLR 126
           +E+ L  +  R   L  +++        + + ++EL  L   ++ I  L   + E+ G R
Sbjct: 3   LEENLSRVVARHDELRALLSTSAGGGEGFVRMSRELADLAPVVEAIGRLDDAKAELAGAR 62

Query: 127 TLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRAGTGGE 186
            L+D    D DM D+A EE+ +   E   L+H +   LLPRD+AD+RG ILEVRAGTGG+
Sbjct: 63  ALLD----DPDMRDLAREEVLRLEAEIPALEHGVKLLLLPRDEADDRGVILEVRAGTGGD 122

Query: 187 EASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLA 230
           EA+LFA D+ +MYERYAQ++GW+FEV++ +++D+ G K  S A
Sbjct: 123 EAALFAGDLLRMYERYAQERGWRFEVMEASDTDIGGIKEASAA 161

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BLAST of CmaCh04G018670 vs. Swiss-Prot
Match: RF1_METSB (Peptide chain release factor 1 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=prfA PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-25
Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = 1


Query: 92  PSEYAKANKELKKLRDTMDLINELRSRQKEINGLRTLMDECPEDKDMLDMATEELNQAVE 151
           P+ Y + ++E   L      I + RS+ +E+ GL  ++ +   D +M  +A EEL  A E
Sbjct: 27  PALYVQLSREFAGLEQVAAAIRDYRSQMQEVEGLAAMLADPTTDSEMRGLAEEELRDAKE 86

Query: 152 EEKRLQHSLLTSLLPRDDADERGCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFE 211
             + L+H L  +LLP+D ADER  ILEVRAGTGG+EA+LFA D+F+MY+RYA+ KGW  E
Sbjct: 87  RLEALEHQLKIALLPKDAADERSAILEVRAGTGGDEAALFAGDLFRMYQRYAESKGWSVE 146

Query: 212 VVDITESDLKGYK 225
           ++   E    G+K
Sbjct: 147 IISANEGAAGGFK 159

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BLAST of CmaCh04G018670 vs. Swiss-Prot
Match: RF1_AQUAE (Peptide chain release factor 1 OS=Aquifex aeolicus (strain VF5) GN=prfA PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.9e-25
Identity = 61/157 (38.85%), Postives = 99/157 (63.06%), Query Frame = 1


Query: 70  RLRAIELRSTFLLNIINRPEA--PPSEYAKANKELKKLRDTMDLINELRSRQKEINGLRT 129
           RL  ++ +   L   +++PE      +Y K +KELK+L++  +L    +  QKE+   + 
Sbjct: 9   RLDKLQEKYRKLQEELSKPEVIQDVEKYKKLSKELKELQEINELYERYKKAQKELKEAKE 68

Query: 130 LMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRAGTGGEE 189
           L+     DKD+ ++A EE+N+  EE K+L+  L   L+P+D  D +  ILE+RAG GGEE
Sbjct: 69  LLKS--SDKDLRELAEEEVNRLTEEMKKLEEELKVHLVPKDPNDTKNVILEIRAGAGGEE 128

Query: 190 ASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 225
           A+LFA D+F+MY++YA++KGWK  ++   ++ L GYK
Sbjct: 129 AALFAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYK 163

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BLAST of CmaCh04G018670 vs. Swiss-Prot
Match: RF1_PELTS (Peptide chain release factor 1 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=prfA PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.7e-25
Identity = 68/163 (41.72%), Postives = 102/163 (62.58%), Query Frame = 1


Query: 67  MEQRLRAIELRSTFLLNIINRPE-----APPSEYAKANKELKKLRDTMDLINELRSRQKE 126
           M ++L +IE +   L N+I  PE     A   EY KA+ EL    D + +  + +   KE
Sbjct: 1   MIEKLDSIEKKYEELENLIGNPEIIADIARWQEYVKAHAELA---DIVAVYRDYKKVVKE 60

Query: 127 INGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRA 186
           I     LM E P D+D+ +MA  EL++  E++  L++ L   LLP+D  DE+  ILE+RA
Sbjct: 61  IQDTIALMKEEP-DEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEIRA 120

Query: 187 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 225
           GTGGEEA+LFA D+F+MY RYA+++GW+ E++D   +D+ G+K
Sbjct: 121 GTGGEEAALFAADLFRMYSRYAERQGWRTEILDANYTDIGGFK 159

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BLAST of CmaCh04G018670 vs. Swiss-Prot
Match: RF1_PARL1 (Peptide chain release factor 1 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=prfA PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.5e-24
Identity = 64/159 (40.25%), Postives = 97/159 (61.01%), Query Frame = 1


Query: 66  IMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKEINGL 125
           I E+RL+++  R   + + +N  + P   +   +KE  +L      I  L +R++E    
Sbjct: 2   IPEERLQSVIARFEAVQSEMNS-DVPRDRFVALSKEFSELEPVAAAIGHLLARRREYADA 61

Query: 126 RTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRAGTGG 185
             L+      +DM +MA EE+ +  EE  RL+H +   LLP+D AD+R  ILEVRAGTGG
Sbjct: 62  EQLL----RVRDMAEMAKEEIARLNEELPRLEHEVQLMLLPKDAADDRNVILEVRAGTGG 121

Query: 186 EEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 225
           +EA+LFA D+F+MYERYA  +GWK E++  +E ++ GYK
Sbjct: 122 DEAALFAGDLFRMYERYASNQGWKVELIAASEGEMGGYK 155

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BLAST of CmaCh04G018670 vs. TrEMBL
Match: A0A0D2SBQ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G116300 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-67
Identity = 147/228 (64.47%), Postives = 176/228 (77.19%), Query Frame = 1


Query: 2   RIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSVRFYSKGEVQTQQLSM 61
           R+ R  +  +  +R + +  ++NP        L P    +     R+YS  E+Q Q LS 
Sbjct: 3   RLSRGLILCMNSLRQIQV-AKSNPHPRNQRSFLLPAIPNIFLSFCRYYST-ELQPQ-LST 62

Query: 62  ELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKE 121
           +L+KIMEQRL AIE RS FL N +N+PEA P+EY+KANKEL KLRD+MDLINELR++QKE
Sbjct: 63  DLLKIMEQRLVAIEHRSAFLENFMNQPEASPTEYSKANKELHKLRDSMDLINELRTKQKE 122

Query: 122 INGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRA 181
           I+ LR+LM ECP DKDML+MATE+L +A+EEEKRLQ+ LL SLLPRDDADER CILEVRA
Sbjct: 123 IDSLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPRDDADERDCILEVRA 182

Query: 182 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLA 230
           GTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYK  S A
Sbjct: 183 GTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKEASAA 227

[Close]

BLAST of CmaCh04G018670 vs. TrEMBL
Match: A0A0B0P8M4_GOSAR (Peptide chain release factor 1 OS=Gossypium arboreum GN=F383_25046 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.3e-67
Identity = 147/228 (64.47%), Postives = 178/228 (78.07%), Query Frame = 1


Query: 2   RIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSVRFYSKGEVQTQQLSM 61
           R+ R  +  +  +R + +    +P    +  L   P+  LS    R+YS  E+Q Q LS 
Sbjct: 3   RLSRGLIPCMNSLRQIQVAKSPHPRNQRSFLLPAIPNIFLSF--CRYYST-ELQPQ-LST 62

Query: 62  ELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKE 121
           +L+K+MEQRL AIE RS FL N +N+PEA P+EY+KAN+EL KLRD+MDLINELR++QKE
Sbjct: 63  DLLKVMEQRLAAIEHRSAFLENFMNQPEASPTEYSKANEELHKLRDSMDLINELRTKQKE 122

Query: 122 INGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRA 181
           I+GLR+LM ECP DKDML+MATE+L +A+EEEKRLQ+ LL SLLPRDDADER CILEVRA
Sbjct: 123 IDGLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPRDDADERDCILEVRA 182

Query: 182 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLA 230
           GTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYK  S A
Sbjct: 183 GTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKQASAA 226

[Close]

BLAST of CmaCh04G018670 vs. TrEMBL
Match: A0A061DZH6_THECC (Peptide chain release factor, putative OS=Theobroma cacao GN=TCM_004929 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67
Identity = 139/193 (72.02%), Postives = 164/193 (84.97%), Query Frame = 1


Query: 37  PSDLLSTPSVRFYSKGEVQTQQLSMELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYA 96
           P  + ST S   Y   E+Q Q LS +L+KIMEQRL AIE RS +L N++N+PEA P+EY+
Sbjct: 36  PEIVNSTLSFSRYYSTELQPQ-LSTDLLKIMEQRLSAIEHRSAYLENLMNQPEASPAEYS 95

Query: 97  KANKELKKLRDTMDLINELRSRQKEINGLRTLMDECPEDKDMLDMATEELNQAVEEEKRL 156
           KANKEL+KL+D+M+LINELR++QKEI+GLR+LM +C +DKDMLDMATE+L QA+EEEKRL
Sbjct: 96  KANKELRKLKDSMELINELRTKQKEIDGLRSLMTKCLDDKDMLDMATEDLGQALEEEKRL 155

Query: 157 QHSLLTSLLPRDDADERGCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDIT 216
           Q+ LL SLLPRDDADER CILEVRAGTGGEEASLFAMD+FKMYERY+ KKGWKFEVV IT
Sbjct: 156 QNLLLKSLLPRDDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSHKKGWKFEVVGIT 215

Query: 217 ESDLKGYKVNSLA 230
           ESDLKGYK  S A
Sbjct: 216 ESDLKGYKEASAA 227

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BLAST of CmaCh04G018670 vs. TrEMBL
Match: W9QNI3_9ROSA (Peptide chain release factor 1 OS=Morus notabilis GN=L484_013874 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-65
Identity = 139/217 (64.06%), Postives = 170/217 (78.34%), Query Frame = 1


Query: 19  LHCRTNPAQICTNPLLPPPSDLLSTPS-----VRFYSK-GEVQTQQLSMELIKIMEQRLR 78
           L C      + T  +   P    +TP+     +R YS  GE+Q Q LS E+I+IMEQRL 
Sbjct: 12  LQCVPTITNVLTQGISVAPPSAAATPTSSLLIIRSYSSIGELQPQ-LSPEIIRIMEQRLT 71

Query: 79  AIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKEINGLRTLMDEC 138
           AIE R+ FL N++N+PEA P+EYA+ANKEL+KL+ + DLI+ELRS+QKEINGL++L  +C
Sbjct: 72  AIEYRTAFLQNLVNQPEASPAEYARANKELRKLKSSADLISELRSKQKEINGLKSLRVDC 131

Query: 139 PEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRAGTGGEEASLFA 198
            EDKDM+ MATEEL +A+ EEKRLQ+ LL SLLP+DDADER CILEVRAGTGGEEASLFA
Sbjct: 132 SEDKDMVSMATEELGEAMVEEKRLQNLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 191

Query: 199 MDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLA 230
           MDIFKMYE+Y+QKKGWKFEVVD+TESDL+GYK  S A
Sbjct: 192 MDIFKMYEKYSQKKGWKFEVVDLTESDLRGYKEASAA 227

[Close]

BLAST of CmaCh04G018670 vs. TrEMBL
Match: A0A067JZX0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14099 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-65
Identity = 149/234 (63.68%), Postives = 177/234 (75.64%), Query Frame = 1


Query: 1   MRIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSV-----RFYSKGEVQ 60
           MRI R     +  +R++    ++ PA   TNP     S   +  +      R YS  E+Q
Sbjct: 1   MRIDRGLKWSVNVVRSIK-QLQSTPAVSHTNPFYRKSSFTSAVANAFLLLSRSYST-ELQ 60

Query: 61  TQQLSMELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINEL 120
           +Q LS +LI+IM+QRL AIE RS +L N INRPEA P+E A+ANKEL+K+R +MDLI EL
Sbjct: 61  SQ-LSPDLIRIMDQRLSAIEHRSAYLENFINRPEASPTESARANKELRKIRGSMDLITEL 120

Query: 121 RSRQKEINGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGC 180
           RS+QKEI+ L +LM ECPEDKDMLDMA EEL+QA+EEEKRLQ+ LL SLLP+DDADER C
Sbjct: 121 RSKQKEIHSLSSLMAECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPKDDADERDC 180

Query: 181 ILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLA 230
           ILEVRAGTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYK  S A
Sbjct: 181 ILEVRAGTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKEASAA 231

[Close]

BLAST of CmaCh04G018670 vs. TAIR10
Match: AT2G47020.1 (AT2G47020.1 Peptide chain release factor 1)

HSP 1 Score: 242.3 bits (617), Expect = 3.1e-64
Identity = 126/190 (66.32%), Postives = 158/190 (83.16%), Query Frame = 1


Query: 40  LLSTPSVRFYSKGEVQTQQLSMELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKAN 99
           +LS+  +R Y+ G     QLS +LIKIM+QRL AIE R+  L  +IN+PE  P E+++AN
Sbjct: 31  VLSSNMIRLYTTG--MEPQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRAN 90

Query: 100 KELKKLRDTMDLINELRSRQKEINGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHS 159
           KEL+KLRD+M LIN+LR++QKEI+GL++L+ E  +DKDMLD+A  EL++AVEEEKRLQ  
Sbjct: 91  KELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTL 150

Query: 160 LLTSLLPRDDADERGCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESD 219
           LL SLLP+D+ADER CILEVRAGTGGEEASLFAMDIF+MYERY+QKKGWKF++VDITESD
Sbjct: 151 LLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESD 210

Query: 220 LKGYKVNSLA 230
           +KGYK  S A
Sbjct: 211 MKGYKEASAA 218

[Close]

BLAST of CmaCh04G018670 vs. TAIR10
Match: AT3G62910.1 (AT3G62910.1 Peptide chain release factor 1)

HSP 1 Score: 98.2 bits (243), Expect = 7.2e-21
Identity = 47/132 (35.61%), Postives = 80/132 (60.61%), Query Frame = 1


Query: 93  SEYAKANKELKKLRDTMDLINELRSRQKEINGLRTLMDECPEDKDMLDMATEELNQAVEE 152
           SEY K  + + +L + + +    +  +K++   + L  E  +D+DM +M   E+N   +E
Sbjct: 85  SEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKE 144

Query: 153 EKRLQHSLLTSLLPRDDADERGCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEV 212
            + L+  L   LLP D  D R  +LEVRAGTGG+EA+++  D+ +MY+RY+++  WKF +
Sbjct: 145 IEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSM 204

Query: 213 VDITESDLKGYK 225
           V  +E++  GYK
Sbjct: 205 VSCSEAEHGGYK 216

[Close]

BLAST of CmaCh04G018670 vs. TAIR10
Match: AT1G56350.1 (AT1G56350.1 Peptide chain release factor 2)

HSP 1 Score: 52.0 bits (123), Expect = 5.9e-07
Identity = 34/112 (30.36%), Postives = 56/112 (50.00%), Query Frame = 1


Query: 121 EINGLRTLMDECPEDKDMLDMATEELNQAVEEE--------KRLQHSLLTSLLPRDDADE 180
           ++ G+ T   E  E  DML +A EE +  +E E        +R+        L   D D 
Sbjct: 174 KMKGVMTFERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDP 233

Query: 181 RGCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 225
             C +EV+AG GG E++ +A  + +MY+ +AQ++ +   VVD    ++ G K
Sbjct: 234 CSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIK 285

[Close]

BLAST of CmaCh04G018670 vs. NCBI nr
Match: gi|659090343|ref|XP_008445965.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis melo])

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-95
Identity = 188/224 (83.93%), Postives = 203/224 (90.62%), Query Frame = 1


Query: 1   MRIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSVRFYSKGEVQTQQLS 60
           MRI+R T+RL+EQIRTLALHCR N ++I  NP LP   D LS+PS RFYSKGEVQ+QQLS
Sbjct: 1   MRINRGTMRLVEQIRTLALHCRNNSSRITKNPSLPFHFDPLSSPSFRFYSKGEVQSQQLS 60

Query: 61  MELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQK 120
           MELIKIMEQRL AIELR+TFLLNIINRPEAPP++YAKANKELKKLRDTM+LI ELRS+QK
Sbjct: 61  MELIKIMEQRLTAIELRNTFLLNIINRPEAPPADYAKANKELKKLRDTMNLITELRSKQK 120

Query: 121 EINGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVR 180
           EINGLRTLM+EC ED+DM DMATEEL QAVEEEKRLQ  LL SLLPRDDADER  ILEVR
Sbjct: 121 EINGLRTLMEECSEDRDMFDMATEELEQAVEEEKRLQQLLLKSLLPRDDADERDSILEVR 180

Query: 181 AGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 225
           AGTGG+EASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK
Sbjct: 181 AGTGGDEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 224

[Close]

BLAST of CmaCh04G018670 vs. NCBI nr
Match: gi|449435146|ref|XP_004135356.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 187/224 (83.48%), Postives = 203/224 (90.62%), Query Frame = 1


Query: 1   MRIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSVRFYSKGEVQTQQLS 60
           MRI+R T+RL+EQ+RTLALHCR + + I  NPLL  PSD LS+ S+RFYSKGEVQ+QQLS
Sbjct: 1   MRINRGTIRLVEQVRTLALHCRNDSSGITKNPLLSLPSDPLSSLSLRFYSKGEVQSQQLS 60

Query: 61  MELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQK 120
           MELIKIMEQRL AIELR+TFLLNIINRPEAPP+EYAKANKELKKLRDTM+LI ELRS+QK
Sbjct: 61  MELIKIMEQRLTAIELRNTFLLNIINRPEAPPAEYAKANKELKKLRDTMNLITELRSKQK 120

Query: 121 EINGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVR 180
           EINGLRTLM+E  ED+DM DMATEEL QAVEEEKRLQ  LL SLLPRDDADER  ILEVR
Sbjct: 121 EINGLRTLMEESSEDRDMFDMATEELEQAVEEEKRLQQFLLKSLLPRDDADERDSILEVR 180

Query: 181 AGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 225
           AGTGG+EASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK
Sbjct: 181 AGTGGDEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYK 224

[Close]

BLAST of CmaCh04G018670 vs. NCBI nr
Match: gi|823187609|ref|XP_012490240.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial isoform X1 [Gossypium raimondii])

HSP 1 Score: 263.8 bits (673), Expect = 2.8e-67
Identity = 147/228 (64.47%), Postives = 176/228 (77.19%), Query Frame = 1


Query: 2   RIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSVRFYSKGEVQTQQLSM 61
           R+ R  +  +  +R + +  ++NP        L P    +     R+YS  E+Q Q LS 
Sbjct: 3   RLSRGLILCMNSLRQIQV-AKSNPHPRNQRSFLLPAIPNIFLSFCRYYST-ELQPQ-LST 62

Query: 62  ELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKE 121
           +L+KIMEQRL AIE RS FL N +N+PEA P+EY+KANKEL KLRD+MDLINELR++QKE
Sbjct: 63  DLLKIMEQRLVAIEHRSAFLENFMNQPEASPTEYSKANKELHKLRDSMDLINELRTKQKE 122

Query: 122 INGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRA 181
           I+ LR+LM ECP DKDML+MATE+L +A+EEEKRLQ+ LL SLLPRDDADER CILEVRA
Sbjct: 123 IDSLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPRDDADERDCILEVRA 182

Query: 182 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLA 230
           GTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYK  S A
Sbjct: 183 GTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKEASAA 227

[Close]

BLAST of CmaCh04G018670 vs. NCBI nr
Match: gi|728841026|gb|KHG20469.1| (Peptide chain release factor 1 [Gossypium arboreum])

HSP 1 Score: 263.1 bits (671), Expect = 4.8e-67
Identity = 147/228 (64.47%), Postives = 178/228 (78.07%), Query Frame = 1


Query: 2   RIHRPTVRLLEQIRTLALHCRTNPAQICTNPLLPPPSDLLSTPSVRFYSKGEVQTQQLSM 61
           R+ R  +  +  +R + +    +P    +  L   P+  LS    R+YS  E+Q Q LS 
Sbjct: 3   RLSRGLIPCMNSLRQIQVAKSPHPRNQRSFLLPAIPNIFLSF--CRYYST-ELQPQ-LST 62

Query: 62  ELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYAKANKELKKLRDTMDLINELRSRQKE 121
           +L+K+MEQRL AIE RS FL N +N+PEA P+EY+KAN+EL KLRD+MDLINELR++QKE
Sbjct: 63  DLLKVMEQRLAAIEHRSAFLENFMNQPEASPTEYSKANEELHKLRDSMDLINELRTKQKE 122

Query: 122 INGLRTLMDECPEDKDMLDMATEELNQAVEEEKRLQHSLLTSLLPRDDADERGCILEVRA 181
           I+GLR+LM ECP DKDML+MATE+L +A+EEEKRLQ+ LL SLLPRDDADER CILEVRA
Sbjct: 123 IDGLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPRDDADERDCILEVRA 182

Query: 182 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKVNSLA 230
           GTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYK  S A
Sbjct: 183 GTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKQASAA 226

[Close]

BLAST of CmaCh04G018670 vs. NCBI nr
Match: gi|590720216|ref|XP_007051271.1| (Peptide chain release factor, putative [Theobroma cacao])

HSP 1 Score: 262.7 bits (670), Expect = 6.3e-67
Identity = 139/193 (72.02%), Postives = 164/193 (84.97%), Query Frame = 1


Query: 37  PSDLLSTPSVRFYSKGEVQTQQLSMELIKIMEQRLRAIELRSTFLLNIINRPEAPPSEYA 96
           P  + ST S   Y   E+Q Q LS +L+KIMEQRL AIE RS +L N++N+PEA P+EY+
Sbjct: 36  PEIVNSTLSFSRYYSTELQPQ-LSTDLLKIMEQRLSAIEHRSAYLENLMNQPEASPAEYS 95

Query: 97  KANKELKKLRDTMDLINELRSRQKEINGLRTLMDECPEDKDMLDMATEELNQAVEEEKRL 156
           KANKEL+KL+D+M+LINELR++QKEI+GLR+LM +C +DKDMLDMATE+L QA+EEEKRL
Sbjct: 96  KANKELRKLKDSMELINELRTKQKEIDGLRSLMTKCLDDKDMLDMATEDLGQALEEEKRL 155

Query: 157 QHSLLTSLLPRDDADERGCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDIT 216
           Q+ LL SLLPRDDADER CILEVRAGTGGEEASLFAMD+FKMYERY+ KKGWKFEVV IT
Sbjct: 156 QNLLLKSLLPRDDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSHKKGWKFEVVGIT 215

Query: 217 ESDLKGYKVNSLA 230
           ESDLKGYK  S A
Sbjct: 216 ESDLKGYKEASAA 227

The following BLAST results are available for this feature:

BLAST of CmaCh04G018670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RF1_RHORT	1.8e-26	40.49	Peptide chain release factor 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH...	[more]
RF1_METSB	2.0e-25	43.61	Peptide chain release factor 1 OS=Methylocella silvestris (strain BL2 / DSM 1551...	[more]
RF1_AQUAE	5.9e-25	38.85	Peptide chain release factor 1 OS=Aquifex aeolicus (strain VF5) GN=prfA PE=3 SV=...	[more]
RF1_PELTS	7.7e-25	41.72	Peptide chain release factor 1 OS=Pelotomaculum thermopropionicum (strain DSM 13...	[more]
RF1_PARL1	6.5e-24	40.25	Peptide chain release factor 1 OS=Parvibaculum lavamentivorans (strain DS-1 / DS...	[more]

BLAST of CmaCh04G018670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2SBQ4_GOSRA	2.0e-67	64.47	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G116300 PE=3 SV=1	[more]
A0A0B0P8M4_GOSAR	3.3e-67	64.47	Peptide chain release factor 1 OS=Gossypium arboreum GN=F383_25046 PE=3 SV=1	[more]
A0A061DZH6_THECC	4.4e-67	72.02	Peptide chain release factor, putative OS=Theobroma cacao GN=TCM_004929 PE=3 SV=...	[more]
W9QNI3_9ROSA	1.1e-65	64.06	Peptide chain release factor 1 OS=Morus notabilis GN=L484_013874 PE=3 SV=1	[more]
A0A067JZX0_JATCU	2.4e-65	63.68	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14099 PE=3 SV=1	[more]

BLAST of CmaCh04G018670 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47020.1	3.1e-64	66.32	Peptide chain release factor 1	[more]
AT3G62910.1	7.2e-21	35.61	Peptide chain release factor 1	[more]
AT1G56350.1	5.9e-07	30.36	Peptide chain release factor 2	[more]

BLAST of CmaCh04G018670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090343\|ref\|XP_008445965.1\|	1.4e-95	83.93	PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis melo]	[more]
gi\|449435146\|ref\|XP_004135356.1\|	1.2e-94	83.48	PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis sativus]	[more]
gi\|823187609\|ref\|XP_012490240.1\|	2.8e-67	64.47	PREDICTED: peptide chain release factor 1-like, mitochondrial isoform X1 [Gossyp...	[more]
gi\|728841026\|gb\|KHG20469.1\|	4.8e-67	64.47	Peptide chain release factor 1 [Gossypium arboreum]	[more]
gi\|590720216\|ref\|XP_007051271.1\|	6.3e-67	72.02	Peptide chain release factor, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005139	PCRF

Vocabulary: **Molecular Function**
Term	Definition
GO:0016149	translation release factor activity, codon specific

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006415	translational termination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0006449	regulation of translational termination
biological_process	GO:0006415	translational termination
cellular_component	GO:0005840	ribosome
cellular_component	GO:0018444	translation release factor complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016149	translation release factor activity, codon specific

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G018670.1	CmaCh04G018670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005139	Peptide chain release factor	PFAM	PF03462	PCRF	coord: 92..225 score: 3.2
IPR005139	Peptide chain release factor	SMART	SM00937	PCRF_a_2	coord: 127..235 score: 8.5
None	No IPR available	unknown	Coil	Coil	coord: 139..159 score: -coord: 95..115 scor
None	No IPR available	GENE3D	G3DSA:1.20.58.410		coord: 92..155 score: 2.
None	No IPR available	PANTHER	PTHR11075	PEPTIDE CHAIN RELEASE FACTOR	coord: 58..224 score: 8.7
None	No IPR available	PANTHER	PTHR11075:SF9	PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED	coord: 58..224 score: 8.7
None	No IPR available	unknown	SSF75620	Release factor	coord: 93..224 score: 2.49

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G018670	Cucsa.076180	Cucumber (Gy14) v1	cgycmaB0126
CmaCh04G018670	Cla022924	Watermelon (97103) v1	cmawmB738
CmaCh04G018670	Csa5G585970	Cucumber (Chinese Long) v2	cmacuB749
CmaCh04G018670	MELO3C011817	Melon (DHL92) v3.5.1	cmameB641
CmaCh04G018670	ClCG11G013230	Watermelon (Charleston Gray)	cmawcgB629
CmaCh04G018670	CSPI05G20940	Wild cucumber (PI 183967)	cmacpiB758
CmaCh04G018670	CmoCh04G019650	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G018670	Lsi04G007230	Bottle gourd (USVL1VR-Ls)	cmalsiB670
CmaCh04G018670	Cp4.1LG01g16340	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G018670	MELO3C011817.2	Melon (DHL92) v3.6.1	cmamedB727
CmaCh04G018670	CsaV3_5G029740	Cucumber (Chinese Long) v3	cmacucB0886
CmaCh04G018670	Cla97C11G219130	Watermelon (97103) v2	cmawmbB735
CmaCh04G018670	Bhi07G000997	Wax gourd	cmawgoB0909
CmaCh04G018670	CsGy5G020460	Cucumber (Gy14) v2	cgybcmaB675
CmaCh04G018670	Carg25939	Silver-seed gourd	carcmaB0495

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G018670	Silver-seed gourd	carcmaB0971
CmaCh04G018670	Cucumber (Chinese Long) v3	cmacucB0898
CmaCh04G018670	Watermelon (97103) v2	cmawmbB726
CmaCh04G018670	Cucurbita maxima (Rimu)	cmacmaB404
CmaCh04G018670	Cucumber (Gy14) v1	cgycmaB0545
CmaCh04G018670	Cucurbita moschata (Rifu)	cmacmoB707
CmaCh04G018670	Wild cucumber (PI 183967)	cmacpiB766
CmaCh04G018670	Cucumber (Chinese Long) v2	cmacuB759
CmaCh04G018670	Melon (DHL92) v3.5.1	cmameB646
CmaCh04G018670	Cucurbita pepo (Zucchini)	cmacpeB694
CmaCh04G018670	Melon (DHL92) v3.6.1	cmamedB730