Lsi04G007230 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G007230
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPeptide chain release factor, putative
Locationchr04 : 6600434 .. 6604798 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAGCCGGATCGGAGCCGGAGAACCTCATCTTTCATCTCTTTGCTCAAGTTTACCCTTCCCTTCCGCCCTGTGCCTTAGCCTTGGAACTTCTAATCTACTTTTCTTTGTCGATTTTGTGATCAATTATTACTAGCCGTCACTACAGATTGGTTAGAGAAGAGGAAAATGAGAATTAATCGAGGAACTATGCGGCTTGTTGAACAAATCCGAACACTTGCCCTACACTGCCGCACGAATCCTGCTCGCATCAGTACAAACCCGTTCCTTCCACCACCAATCGAGCCTCTTGCTACTCCGTCTTTTCGTTTTTATTCTAAAGGTTCTTATCTTCTTGCCCTTTGAATTATGAAACTGTATATTATTGGCGATTACCATTTCATTGAAATCTTTGTTTCTATTTTTCGAAGCTTAGTCTACTATAATATGAAGATCTCTTCAAACTTGTTTAAAATAGGCGAAGTACAATCGCAGCAGCTATCAATGGAGCTTATCAAAATAATGGAACAAAGGTTGACGGCCATTGAGCTTAGGAGCACTTTTCTTCTAAACATAATTAACCGGGTACCACTTATTCTCAATTCTATATGCTCTCTCCTTGGTATACATCACACAGCTTCGAAATTTAGTTTTTAGTTAACATATTCAAAGCTGTACATCAAATCGAATGAGATAGAAGCCATAAATCTCACACATTTGGAAGATACATAGATTTACAACCAATTTTTTTCTTCTTGGCTTAAATATGATTGCTGGAGAAACCACCGTGGATTGACCTAGCGATAAATAAAAGGCAGGGTTAAGAGGGGACGAGTTTAATCTATGTTGGCCACCTATCTAAGGTTAGGATAAAATATCCTATGAGTTTTCTTGACACCTAAATGTTGTAGGGTGAGGTAGGGACAGTGAAAATGTGTGTAAGCGCTCGAAGACTCACGGATATAAAAAAAAAGAAAAAATCATTGCCGGAGAGAAACAACTCTTCTATCGCATTTGGTTTGGATTGACTCACCTTCAAAGAAGATAAAATTCTTTATTTGGGAGCTTGCTCACAATGTTGTTGTCAATACCCAAGACCTCTTACAGCACCATATGGCATATGCCATATTTATCAATCTTGCATCTATGCAAGAATGAAGCTGAATCTCAAGGTCACATTTTCCACGCTTTTGGAATGATATGCTCGGTAACGGAAAACAACAAACGAATAAAACGAAAAATAGAAACAAGAAAAAAATATTGTACGGAGATTAAGTGTTTCAATTGAGTTTTATATGGTCCTTGACGTGATAACATTACAAGTATTTATAGGCATATAAAAAACTAACCACCAATGCACTAAACATAAAACTCTCCCTTAATCATTCCCACTAAGCCATTAAGCCACTACCCTCCAATTTAGGAGGCACTACTCTAAAATAAACCCACTAACTTTAATTAAAGAAAAACTAATTTAAACTACTTTCAAATTAAGTTTGCACTAATTTTTTATTGGTCAGGGGTTTTACCACACCATCCCAAAGGTTTCCTCTCGTCCACTCTCCCAGGACATCCTTTCTAGAAGGAGAAGAAAATAATTTGGATAAACATAATTAGAGCTTTCTTTTGGGCAATTTGGATTAAAAGGAATCATTGTCTCTTCTCCAAGAAAGAACCACCTTATCGCTGGATTTTTTAGCACATAATTTTCTTAGCTATCTCTTAGTATAAATTGTCTCTGTCTTTTTAATTCTTATACTTTTGTCCCTCTTTGTTCAACAAATTGTTTCTTATCATGAAAGAAAAATAATTAAATAAATAAAATCTTAGTCTTCCCACCCCTCCTACTCTTCCTTTTTCTCCTCTACCCCTTTCTCTTCTGATTAAAGACCTTAAATAGTGATTTAATTTGCTTTGTTCATGGTGTTATTTGAAGATAGCCAGAAGCCCCACCAGCCGAGTACGCAAAGGCTAACAAGGAGCTTAAAAAACTCAGAGATACGATGGATCTAATAAATGAGTTGAGGTCTAAACAGAAGGTATGGAGTACAGTCAACACGTTAGATATTGTCTTTCTTTACGTTACGAACTGCTAGATGTTATCTTTGAAATGGTGAAACAGATGGCTGGATTACTTCCTTTAGGTGCAAAGATGATTTCTTTTCATGCTGTTCTTTCCCAATTATTTACTAATTCCCTATTTGTTTGGCTTGGTTGTTGTCCGAACTCCAAAATGTTGTAAATAAAATTTGTGTGAGTATTAATTACTTTAGCTAGCCCAATGGTAAATGTGTCTCCCAACTTTTCTTTGTGCTTTGTCTCGCAAGTAAAACTTGTGTGGGTGTTTGTGTCTTACAATGAGATTCTTGAAAGTGGACTGACTTGGAGGCATCCATCTTCCCTAATGAATTGTGTGTGGTGGTAATATTTACAGAAGGAAATCAGAAATTTTTTATGATTGTGTTCTTCCTGTAGGAAATTAATGGTTTGAGAACGTTAATGGAGGAATGCACAGAGGATAAAGATATGCTTAATATGGCTACCGAGGAATTGGATCAGGCAGTTCAAGCAGAGAAAAGATTACAGCAGTTCTTGCTCAAGTCATTACTTCCCAGAGATGATGCTGATGAGAGGGATTGCATCTTGGAGGTGAGAGCAGGTAGGTAATGGTGCATATTAGTGAACGTAGCCATTAATGGGAGTATTTTCTCCCAAAAGAAAAAAAAAAAAGAGGGAGTATTTTCTTGTTGTGACCAGGCATTGTTTCTGTTATTTTCTCTGTTTCGGATGTCGACAGCTGTAGCTAATAGAAAATTTTACCAGGAACTGGTGGAGAAGAAGCTTCTCTGTTTGCCATGGATATATTCAAAATGTGAGTGCAGTAGCATAGCATGTTTATTATCACTGGTTATAATAATTCCACACGTTCTAGTTCTCAAGGGTTATTTCCTTTGGATCAAAATAGGTATGAGAGATACGCACAGAAGAAAGGCTGGAAATTTGAGGTGGTAGACATAACAGAATCGGATCTTAAAGGATATAAGGTGATTTCATTAGCAAATTTTAATTTCCTTTGAAGAACATATCTCGTATATTTATCGTCGTTCTTCACAGGAAGCCATTGCTGCAATATCAGGTGCTGGGGTGTATGGAAAACTTAAATTTGAGAGTGGAATTCACCGAGTGCAGGTTTTCTCGACATGCATATCATCAGCCTTTTAGCATTATTTACCAGAACCAACAATGGTAAATTGATAATTGAAACCATTCTTTTCCTTGGGCAGCGAGTTCCTGTGACAGAGAAGTCTGGACGTGTTCACACCAGTGCTGTTTCTGTAGCCACTCTCCCTCAAGCAGACGAGGTTCCAACCCAAGCCACTTTCTTCCTAGTAAATGAATATCCACAGTAATTCGTAACTAAAAGGAAAAGGATTGATTATTGTTGAGGGCATGTGCAGGTAGATGTAGAGTTGAAGAACGAGGACTTGAGAATAGATACGTACAGATCAGGCGGTTCAGGAGGTCAGCATGCAAATACCACAAATAGTGCTGTTAGAGTGACTCACGTTCCAACTGGGTTGTGTGTGTCCATACAAGATGAACGATCCCAACATATGGTAGGAACAATGATTTTTCTATTGCTTATTTGATTTTGTTGGGTAGTTCTGTTTGGTTTTAACTCGTTTGTGTTTCGTTTGGTTCGGGACAGAACAAAGCGAAGGCGCTTAAAGTTATATGTGCAAAGCTATACGAAATGGAACGGCGTAGAATTCAGAGCAGTCGGTCGAAGCTTCGATCAGAACAGGTAAGAAGAAGAGATTGTGTTGGAATTATAAGTAAATAAACATTGAATTGAATTGATTTTGAGTGATTATAAACATGACAAGAGTAATTTAAAATCACTCCTAAACATGAACTAATGGGAGTGAGTTTGGATGATAAAAAGCAGATTGGTAGTGGGGACAGATCGGAACGCATCCGCACATACAACTTTCCACAGGGGCGGGTAACAGACCATCGAGTAGGCATTACGGACCACGCAATTGAGGAGGTAATGCAGGGGGAGAATCTGGATATGTTCGTGGACGCTCTGTTATTGCAGCAGGAAATGGATGCAATTGCATCCTTCACTTCCTCTTCTTAGTAGTGGCAGTGAAGAGGAGGAGCAACATTGCATCAAATAGGATCTGCTCACTTTGCATTCGATTCAGGTACAATAAACAAAATGTCTTTCTTATAGAAGTACAATACAAGTAGAATGGGTTGGGGGTTACATACATTACAACTTTGAAGGGATTAAATTTCATTTATTTTACAATGATTAGTAGTATGCCGTAGTAGTAGTGGTGTTGATGCAGTTGTATGCACACATTGCCTTGCCATTACGG

mRNA sequence

ACAGCCGGATCGGAGCCGGAGAACCTCATCTTTCATCTCTTTGCTCAACCGTCACTACAGATTGGTTAGAGAAGAGGAAAATGAGAATTAATCGAGGAACTATGCGGCTTGTTGAACAAATCCGAACACTTGCCCTACACTGCCGCACGAATCCTGCTCGCATCAGTACAAACCCGTTCCTTCCACCACCAATCGAGCCTCTTGCTACTCCGTCTTTTCGTTTTTATTCTAAAGTCTACTATAATATGAAGATCTCTTCAAACTTGTTTAAAATAGGCGAAGTACAATCGCAGCAGCTATCAATGGAGCTTATCAAAATAATGGAACAAAGGTTGACGGCCATTGAGCTTAGGAGCACTTTTCTTCTAAACATAATTAACCGGCCAGAAGCCCCACCAGCCGAGTACGCAAAGGCTAACAAGGAGCTTAAAAAACTCAGAGATACGATGGATCTAATAAATGAGTTGAGGTCTAAACAGAAGGAAATTAATGGTTTGAGAACGTTAATGGAGGAATGCACAGAGGATAAAGATATGCTTAATATGGCTACCGAGGAATTGGATCAGGCAGTTCAAGCAGAGAAAAGATTACAGCAGTTCTTGCTCAAGTCATTACTTCCCAGAGATGATGCTGATGAGAGGGATTGCATCTTGGAGGTGAGAGCAGGAACTGGTGGAGAAGAAGCTTCTCTGTTTGCCATGGATATATTCAAAATGTATGAGAGATACGCACAGAAGAAAGGCTGGAAATTTGAGGTGGTAGACATAACAGAATCGGATCTTAAAGGATATAAGGAAGCCATTGCTGCAATATCAGGTGCTGGGGTGTATGGAAAACTTAAATTTGAGAGTGGAATTCACCGAGTGCAGCGAGTTCCTGTGACAGAGAAGTCTGGACGTGTTCACACCAGTGCTGTTTCTGTAGCCACTCTCCCTCAAGCAGACGAGGTTCCAACCCAAGCCACTTTCTTCCTAGTAGATGTAGAGTTGAAGAACGAGGACTTGAGAATAGATACGTACAGATCAGGCGGTTCAGGAGGTCAGCATGCAAATACCACAAATAGTGCTGTTAGAGTGACTCACGTTCCAACTGGGTTGTGTGTGTCCATACAAGATGAACGATCCCAACATATGAACAAAGCGAAGGCGCTTAAAGTTATATGTGCAAAGCTATACGAAATGGAACGGCGTAGAATTCAGAGCAGTCGGTCGAAGCTTCGATCAGAACAGTATGCCGTAGTAGTAGTGGTGTTGATGCAGTTGTATGCACACATTGCCTTGCCATTACGG

Coding sequence (CDS)

ATGAGAATTAATCGAGGAACTATGCGGCTTGTTGAACAAATCCGAACACTTGCCCTACACTGCCGCACGAATCCTGCTCGCATCAGTACAAACCCGTTCCTTCCACCACCAATCGAGCCTCTTGCTACTCCGTCTTTTCGTTTTTATTCTAAAGTCTACTATAATATGAAGATCTCTTCAAACTTGTTTAAAATAGGCGAAGTACAATCGCAGCAGCTATCAATGGAGCTTATCAAAATAATGGAACAAAGGTTGACGGCCATTGAGCTTAGGAGCACTTTTCTTCTAAACATAATTAACCGGCCAGAAGCCCCACCAGCCGAGTACGCAAAGGCTAACAAGGAGCTTAAAAAACTCAGAGATACGATGGATCTAATAAATGAGTTGAGGTCTAAACAGAAGGAAATTAATGGTTTGAGAACGTTAATGGAGGAATGCACAGAGGATAAAGATATGCTTAATATGGCTACCGAGGAATTGGATCAGGCAGTTCAAGCAGAGAAAAGATTACAGCAGTTCTTGCTCAAGTCATTACTTCCCAGAGATGATGCTGATGAGAGGGATTGCATCTTGGAGGTGAGAGCAGGAACTGGTGGAGAAGAAGCTTCTCTGTTTGCCATGGATATATTCAAAATGTATGAGAGATACGCACAGAAGAAAGGCTGGAAATTTGAGGTGGTAGACATAACAGAATCGGATCTTAAAGGATATAAGGAAGCCATTGCTGCAATATCAGGTGCTGGGGTGTATGGAAAACTTAAATTTGAGAGTGGAATTCACCGAGTGCAGCGAGTTCCTGTGACAGAGAAGTCTGGACGTGTTCACACCAGTGCTGTTTCTGTAGCCACTCTCCCTCAAGCAGACGAGGTTCCAACCCAAGCCACTTTCTTCCTAGTAGATGTAGAGTTGAAGAACGAGGACTTGAGAATAGATACGTACAGATCAGGCGGTTCAGGAGGTCAGCATGCAAATACCACAAATAGTGCTGTTAGAGTGACTCACGTTCCAACTGGGTTGTGTGTGTCCATACAAGATGAACGATCCCAACATATGAACAAAGCGAAGGCGCTTAAAGTTATATGTGCAAAGCTATACGAAATGGAACGGCGTAGAATTCAGAGCAGTCGGTCGAAGCTTCGATCAGAACAGTATGCCGTAGTAGTAGTGGTGTTGATGCAGTTGTATGCACACATTGCCTTGCCATTACGG

Protein sequence

MRINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISSNLFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRDTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPRDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLYEMERRRIQSSRSKLRSEQYAVVVVVLMQLYAHIALPLR
Homology
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BLAST of Lsi04G007230 vs. Swiss-Prot
Match: RF1_SPHWW (Peptide chain release factor 1 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=prfA PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 7.6e-73
Identity = 144/301 (47.84%), Postives = 204/301 (67.77%), Query Frame = 1 

Query: 80  IMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRDTMDLINELRSKQKEINGL 139
           I   R+  IE R   L  ++ R + P  ++ + +K+  ++        E+R  + E++ L
Sbjct: 4   ITSARIAQIEARRDELQALMARGDLPSDQFVQLSKDYAEIEPVAQAAGEVRRLRAELDVL 63

Query: 140 RTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPRDDADERDCILEVRAGTGG 199
           + + E+   D ++  MA EE ++        ++ L   LLPRD ADER  +LE+RAGTGG
Sbjct: 64  KGMAEDEAGDAELRAMAIEEAEEIRARLPEAERALALKLLPRDAADERSAMLEIRAGTGG 123

Query: 200 EEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGVYGKLKFESGI 259
           +EA+LFA D+F+MY+RYA+ +GW+ E++  + +DL GYKE +A+++GAGV+ +LKFESG+
Sbjct: 124 DEAALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASVTGAGVFARLKFESGV 183

Query: 260 HRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKNEDLRIDTYRSGGSG 319
           HRVQRVPVTE  GR+HTSA +VA LP+A+E         VDV + ++DLRID YRS G G
Sbjct: 184 HRVQRVPVTESGGRIHTSAATVAVLPEAEE---------VDVHIDDKDLRIDVYRSSGPG 243

Query: 320 GQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLYEMERRRIQSSRSKL 379
           GQ  NTT+SAVR+TH+PTGL V  QDE+SQH NKAKALKV+  +LYEMER R+ S R+  
Sbjct: 244 GQSVNTTDSAVRITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEMERERLASERAGA 295

Query: 380 R 381
           R
Sbjct: 304 R 295

[Close]
BLAST of Lsi04G007230 vs. Swiss-Prot
Match: RF1_RICB8 (Peptide chain release factor 1 OS=Rickettsia bellii (strain OSU 85-389) GN=prfA PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 8.4e-72
Identity = 137/276 (49.64%), Postives = 191/276 (69.20%), Query Frame = 1 

Query: 108 EYAKANKELKKLRDTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAE 167
           E+ KA+KE   L D +  I E    + E+       +E + DK  L M  EE+     + 
Sbjct: 32  EFVKASKEYADLEDIVQKIKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSL 91

Query: 168 KRLQQFLLKSLLPRDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVV 227
             L++ +  +LLP+D+AD +  I+E+RAGTGGEEA+LFA  +F MY+RYA+ KGW+FE++
Sbjct: 92  PTLERSVKIALLPKDEADSKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEIL 151

Query: 228 DITESDLKGYKEAIAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQA 287
            I E+ + GYKE  A+I G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA LP+ 
Sbjct: 152 SIDETGIGGYKEVSASIKGKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEV 211

Query: 288 DEVPTQATFFLVDVELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDER 347
           ++         VD++L+ +DLRIDTYR+ G+GGQH NTT+SAVR+TH+PTG+ V++QDE+
Sbjct: 212 ED---------VDIKLEEKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEK 271

Query: 348 SQHMNKAKALKVICAKLYEMERRRIQSSRSKLRSEQ 384
           SQH NKAKALK++ A++YE ERR+    R+  R EQ
Sbjct: 272 SQHKNKAKALKILRARIYEEERRKKDQERANNRREQ 298

[Close]
BLAST of Lsi04G007230 vs. Swiss-Prot
Match: RF1_BRUSU (Peptide chain release factor 1 OS=Brucella suis biovar 1 (strain 1330) GN=prfA PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-71
Identity = 142/308 (46.10%), Postives = 213/308 (69.16%), Query Frame = 1 

Query: 77  LIKIMEQRLTAIELRSTFLLN-IINRPEAPPAEYAKANKELKKLRDTMDLINELRSKQKE 136
           +I + + R+  +  R + + + + N P++    Y K   E  +L+D +  I EL   + E
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 60

Query: 137 INGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPRDDADERDCILEVRA 196
            + L  + ++ + D +M  +A EEL +  +    L+Q +   LLP+D AD+++ ILE+RA
Sbjct: 61  ASDLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRA 120

Query: 197 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGVYGKLKF 256
           GTGG EA+LFA D+F+MYERYA +KGW+ E+V  +E D  GYKE IA +SG GV+ KLKF
Sbjct: 121 GTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKF 180

Query: 257 ESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKNEDLRIDTYRS 316
           ESG+HRVQRVP TE  GR+HTSA +VA LP+A++         +D+E++NED+RIDT R+
Sbjct: 181 ESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED---------IDIEIRNEDIRIDTMRA 240

Query: 317 GGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLYEMERRRIQSS 376
            G+GGQH NTT+SAVR+TH+PTG+ V +Q E+SQH N+A+A++++ A+LY+MER++ +S 
Sbjct: 241 SGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESE 296

Query: 377 RSKLRSEQ 384
           RS+ R  Q
Sbjct: 301 RSQARRSQ 296

[Close]
BLAST of Lsi04G007230 vs. Swiss-Prot
Match: RF1_BRUME (Peptide chain release factor 1 OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=prfA PE=3 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-71
Identity = 142/308 (46.10%), Postives = 213/308 (69.16%), Query Frame = 1 

Query: 77  LIKIMEQRLTAIELRSTFLLN-IINRPEAPPAEYAKANKELKKLRDTMDLINELRSKQKE 136
           +I + + R+  +  R + + + + N P++    Y K   E  +L+D +  I EL   + E
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 60

Query: 137 INGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPRDDADERDCILEVRA 196
            + L  + ++ + D +M  +A EEL +  +    L+Q +   LLP+D AD+++ ILE+RA
Sbjct: 61  ASDLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRA 120

Query: 197 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGVYGKLKF 256
           GTGG EA+LFA D+F+MYERYA +KGW+ E+V  +E D  GYKE IA +SG GV+ KLKF
Sbjct: 121 GTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKF 180

Query: 257 ESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKNEDLRIDTYRS 316
           ESG+HRVQRVP TE  GR+HTSA +VA LP+A++         +D+E++NED+RIDT R+
Sbjct: 181 ESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED---------IDIEIRNEDIRIDTMRA 240

Query: 317 GGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLYEMERRRIQSS 376
            G+GGQH NTT+SAVR+TH+PTG+ V +Q E+SQH N+A+A++++ A+LY+MER++ +S 
Sbjct: 241 SGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESE 296

Query: 377 RSKLRSEQ 384
           RS+ R  Q
Sbjct: 301 RSQARRSQ 296

[Close]
BLAST of Lsi04G007230 vs. Swiss-Prot
Match: RF1_BRUMB (Peptide chain release factor 1 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=prfA PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-71
Identity = 142/308 (46.10%), Postives = 213/308 (69.16%), Query Frame = 1 

Query: 77  LIKIMEQRLTAIELRSTFLLN-IINRPEAPPAEYAKANKELKKLRDTMDLINELRSKQKE 136
           +I + + R+  +  R + + + + N P++    Y K   E  +L+D +  I EL   + E
Sbjct: 1   MIALPQDRMDQLLKRFSMIESQMANNPDSDT--YVKLASEYSELQDVVGKIRELSDARME 60

Query: 137 INGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPRDDADERDCILEVRA 196
            + L  + ++ + D +M  +A EEL +  +    L+Q +   LLP+D AD+++ ILE+RA
Sbjct: 61  ASDLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRA 120

Query: 197 GTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGVYGKLKF 256
           GTGG EA+LFA D+F+MYERYA +KGW+ E+V  +E D  GYKE IA +SG GV+ KLKF
Sbjct: 121 GTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKF 180

Query: 257 ESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKNEDLRIDTYRS 316
           ESG+HRVQRVP TE  GR+HTSA +VA LP+A++         +D+E++NED+RIDT R+
Sbjct: 181 ESGVHRVQRVPETEAGGRIHTSAATVAVLPEAED---------IDIEIRNEDIRIDTMRA 240

Query: 317 GGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLYEMERRRIQSS 376
            G+GGQH NTT+SAVR+TH+PTG+ V +Q E+SQH N+A+A++++ A+LY+MER++ +S 
Sbjct: 241 SGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQKAESE 296

Query: 377 RSKLRSEQ 384
           RS+ R  Q
Sbjct: 301 RSQARRSQ 296

[Close]
BLAST of Lsi04G007230 vs. TrEMBL
Match: A0A0D2SBQ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G116300 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 8.8e-137
Identity = 271/382 (70.94%), Postives = 306/382 (80.10%), Query Frame = 1 

Query: 2   RINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISSN 61
           R++RG +  +  +R + +  ++NP   +   FL P I  +     R+YS           
Sbjct: 3   RLSRGLILCMNSLRQIQV-AKSNPHPRNQRSFLLPAIPNIFLSFCRYYST---------- 62

Query: 62  LFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRD 121
                E+Q Q LS +L+KIMEQRL AIE RS FL N +N+PEA P EY+KANKEL KLRD
Sbjct: 63  -----ELQPQ-LSTDLLKIMEQRLVAIEHRSAFLENFMNQPEASPTEYSKANKELHKLRD 122

Query: 122 TMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPR 181
           +MDLINELR+KQKEI+ LR+LM EC  DKDML MATE+L +A++ EKRLQ  LLKSLLPR
Sbjct: 123 SMDLINELRTKQKEIDSLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPR 182

Query: 182 DDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAI 241
           DDADERDCILEVRAGTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYKEA 
Sbjct: 183 DDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKEAS 242

Query: 242 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDV 301
           AAISGAGVYGKLKFESGIHRVQRVPVTEKSGR+HTSAVS+A LPQADE         VDV
Sbjct: 243 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRIHTSAVSIAVLPQADE---------VDV 302

Query: 302 ELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVIC 361
            L+NEDLRIDTYRSGGSGGQHANTTNSAVRVTH PTG+ V+IQDERSQHMNKAKALKV+C
Sbjct: 303 RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHFPTGITVTIQDERSQHMNKAKALKVLC 358

Query: 362 AKLYEMERRRIQSSRSKLRSEQ 384
           AKLYEMER RIQ+SRSKLRSEQ
Sbjct: 363 AKLYEMERSRIQTSRSKLRSEQ 358

[Close]
BLAST of Lsi04G007230 vs. TrEMBL
Match: A0A0B0P8M4_GOSAR (Peptide chain release factor 1 OS=Gossypium arboreum GN=F383_25046 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.3e-135
Identity = 269/382 (70.42%), Postives = 305/382 (79.84%), Query Frame = 1 

Query: 2   RINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISSN 61
           R++RG +  +  +R + +    +P   +   FL P I  +     R+YS           
Sbjct: 3   RLSRGLIPCMNSLRQIQVAKSPHPR--NQRSFLLPAIPNIFLSFCRYYST---------- 62

Query: 62  LFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRD 121
                E+Q Q LS +L+K+MEQRL AIE RS FL N +N+PEA P EY+KAN+EL KLRD
Sbjct: 63  -----ELQPQ-LSTDLLKVMEQRLAAIEHRSAFLENFMNQPEASPTEYSKANEELHKLRD 122

Query: 122 TMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPR 181
           +MDLINELR+KQKEI+GLR+LM EC  DKDML MATE+L +A++ EKRLQ  LLKSLLPR
Sbjct: 123 SMDLINELRTKQKEIDGLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPR 182

Query: 182 DDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAI 241
           DDADERDCILEVRAGTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYK+A 
Sbjct: 183 DDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKQAS 242

Query: 242 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDV 301
           AAISGAGVYGKLKFESGIHRVQRVPVTEKSGR+HTSAVSVA LPQADE         VDV
Sbjct: 243 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRIHTSAVSVAVLPQADE---------VDV 302

Query: 302 ELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVIC 361
            L+NEDLRIDTYRSGGSGGQHANTTNSAVRVTH PTG+ V+IQDERSQHMNKAKALKV+C
Sbjct: 303 RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHFPTGITVTIQDERSQHMNKAKALKVLC 357

Query: 362 AKLYEMERRRIQSSRSKLRSEQ 384
           AKLYEMER RIQ+SRSKLRSEQ
Sbjct: 363 AKLYEMERSRIQTSRSKLRSEQ 357

[Close]
BLAST of Lsi04G007230 vs. TrEMBL
Match: A0A067JZX0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14099 PE=3 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 271/384 (70.57%), Postives = 306/384 (79.69%), Query Frame = 1 

Query: 1   MRINRGTMRLVEQIRTLALHCRTNPARISTNPFL-PPPIEPLATPSFRFYSKVYYNMKIS 60
           MRI+RG    V  +R++    ++ PA   TNPF            +F   S+ Y      
Sbjct: 1   MRIDRGLKWSVNVVRSIK-QLQSTPAVSHTNPFYRKSSFTSAVANAFLLLSRSYST---- 60

Query: 61  SNLFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKL 120
                  E+QSQ LS +LI+IM+QRL+AIE RS +L N INRPEA P E A+ANKEL+K+
Sbjct: 61  -------ELQSQ-LSPDLIRIMDQRLSAIEHRSAYLENFINRPEASPTESARANKELRKI 120

Query: 121 RDTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLL 180
           R +MDLI ELRSKQKEI+ L +LM EC EDKDML+MA EEL QA++ EKRLQ  LLKSLL
Sbjct: 121 RGSMDLITELRSKQKEIHSLSSLMAECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLL 180

Query: 181 PRDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKE 240
           P+DDADERDCILEVRAGTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYKE
Sbjct: 181 PKDDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKE 240

Query: 241 AIAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLV 300
           A AAISGAGV+GKLKFESGIHRVQRVPVTEKSGRVHTSAVSVA LPQADE         V
Sbjct: 241 ASAAISGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADE---------V 300

Query: 301 DVELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKV 360
           DV+L+N+DLRIDTYRSGGSGGQHANTTNSAVR+TH+PTG+ VSIQDERSQHMNKAKALKV
Sbjct: 301 DVQLRNDDLRIDTYRSGGSGGQHANTTNSAVRITHLPTGMTVSIQDERSQHMNKAKALKV 360

Query: 361 ICAKLYEMERRRIQSSRSKLRSEQ 384
           +CAKLYEMER RI +SRSKLRSEQ
Sbjct: 361 LCAKLYEMERSRIHTSRSKLRSEQ 362

[Close]
BLAST of Lsi04G007230 vs. TrEMBL
Match: A0A061DZH6_THECC (Peptide chain release factor, putative OS=Theobroma cacao GN=TCM_004929 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 3.1e-134
Identity = 269/382 (70.42%), Postives = 308/382 (80.63%), Query Frame = 1 

Query: 2   RINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISSN 61
           R+NR  +  +   R L L  ++N    +   FL P I        R+YS           
Sbjct: 3   RLNRTFIWWINSSRQLQL-AKSNANPYNQRSFLLPEIVNSTLSFSRYYST---------- 62

Query: 62  LFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRD 121
                E+Q Q LS +L+KIMEQRL+AIE RS +L N++N+PEA PAEY+KANKEL+KL+D
Sbjct: 63  -----ELQPQ-LSTDLLKIMEQRLSAIEHRSAYLENLMNQPEASPAEYSKANKELRKLKD 122

Query: 122 TMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPR 181
           +M+LINELR+KQKEI+GLR+LM +C +DKDML+MATE+L QA++ EKRLQ  LLKSLLPR
Sbjct: 123 SMELINELRTKQKEIDGLRSLMTKCLDDKDMLDMATEDLGQALEEEKRLQNLLLKSLLPR 182

Query: 182 DDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAI 241
           DDADERDCILEVRAGTGGEEASLFAMD+FKMYERY+ KKGWKFEVV ITESDLKGYKEA 
Sbjct: 183 DDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSHKKGWKFEVVGITESDLKGYKEAS 242

Query: 242 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDV 301
           AAISGAGVYGKLKFESGIHRVQRVPVTEKSGR+HTSAVSVA LPQADE         VDV
Sbjct: 243 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRIHTSAVSVAILPQADE---------VDV 302

Query: 302 ELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVIC 361
           +L+NEDLRIDTYRSGGSGGQHANTTNSAVRVTH+ TG+ VSIQDERSQHMNKAKALKV+C
Sbjct: 303 QLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHLLTGVTVSIQDERSQHMNKAKALKVLC 358

Query: 362 AKLYEMERRRIQSSRSKLRSEQ 384
           AKLYE+ER RIQ SRSKLRS+Q
Sbjct: 363 AKLYELERSRIQMSRSKLRSQQ 358

[Close]
BLAST of Lsi04G007230 vs. TrEMBL
Match: V4TWD1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020151mg PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 6.6e-132
Identity = 249/314 (79.30%), Postives = 280/314 (89.17%), Query Frame = 1 

Query: 70  SQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRDTMDLINEL 129
           ++ LS +LIKIMEQR+ AIE RS  L N++N+PEA PAEY+KANKEL+KLRD+M LI+EL
Sbjct: 77  TEMLSNDLIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMQLISEL 136

Query: 130 RSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPRDDADERDC 189
           R+KQKEI+GL++L+ EC+EDKDML+MATEEL  A+  EKRLQ  LLKSLLP+DDADERDC
Sbjct: 137 RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 196

Query: 190 ILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGV 249
           ILEVRAGTGGEEASLFA+D+FKMYERY+QKKGWKFEVV +TESDL+GYKEA AAISG GV
Sbjct: 197 ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 256

Query: 250 YGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKNEDLR 309
           YGKLKFESGIHRVQRVP+TEKSGRVHTSAVSVA LPQADE         VDV L+NEDLR
Sbjct: 257 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE---------VDVRLRNEDLR 316

Query: 310 IDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLYEMER 369
           IDTYRSGGSGGQHANTTNSAVRVTH+PTG+ +SIQDERSQHMNKAKALKV+CAKLYEMER
Sbjct: 317 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 376

Query: 370 RRIQSSRSKLRSEQ 384
            RI  SRSKLRSEQ
Sbjct: 377 SRIHLSRSKLRSEQ 381

[Close]
BLAST of Lsi04G007230 vs. TAIR10
Match: AT2G47020.1 (AT2G47020.1 Peptide chain release factor 1)

HSP 1 Score: 461.8 bits (1187), Expect = 4.2e-130
Identity = 238/327 (72.78%), Postives = 287/327 (87.77%), Query Frame = 1 

Query: 58  ISSNLFKIGEVQSQ-QLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKEL 117
           +SSN+ ++     + QLS +LIKIM+QRL+AIE R+  L  +IN+PE  P E+++ANKEL
Sbjct: 32  LSSNMIRLYTTGMEPQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKEL 91

Query: 118 KKLRDTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLK 177
           +KLRD+M LIN+LR+KQKEI+GL++L+ E ++DKDML++A  ELD+AV+ EKRLQ  LLK
Sbjct: 92  RKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLK 151

Query: 178 SLLPRDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKG 237
           SLLP+D+ADERDCILEVRAGTGGEEASLFAMDIF+MYERY+QKKGWKF++VDITESD+KG
Sbjct: 152 SLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKG 211

Query: 238 YKEAIAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATF 297
           YKEA AAI GA VYGKLKFESGIHRVQR+P+TEKSGR+HTSA+SVA LPQADE       
Sbjct: 212 YKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE------- 271

Query: 298 FLVDVELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKA 357
             VDV+L+NEDLRIDTYRSGGSGGQHANTTNSAVR+ H+PTG+ VSIQDERSQHMN+AKA
Sbjct: 272 --VDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKA 331

Query: 358 LKVICAKLYEMERRRIQSSRSKLRSEQ 384
           LKV+CA+LYE+ER RIQSSRSKLRS+Q
Sbjct: 332 LKVLCARLYEIERLRIQSSRSKLRSDQ 349

[Close]
BLAST of Lsi04G007230 vs. TAIR10
Match: AT3G62910.1 (AT3G62910.1 Peptide chain release factor 1)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-52
Identity = 106/281 (37.72%), Postives = 178/281 (63.35%), Query Frame = 1 

Query: 107 AEYAKANKELKKLRDTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQA 166
           +EY K  + + +L + + +    +  +K++   + L +E  +D+DM  M   E++   + 
Sbjct: 85  SEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKE 144

Query: 167 EKRLQQFLLKSLLPRDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEV 226
            + L++ L   LLP D  D R+ +LEVRAGTGG+EA+++  D+ +MY+RY+++  WKF +
Sbjct: 145 IEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSM 204

Query: 227 VDITESDLKGYKEAIAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQ 286
           V  +E++  GYK  +  I G  VY KLK+ESG+HRVQRVP TE  GRVHTS  +VA +P+
Sbjct: 205 VSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPE 264

Query: 287 ADEVPTQATFFLVDVELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDE 346
           ADE         V+V +  +D+ + + RSGG+GGQ+ N   +A+ + H P+G+ +   +E
Sbjct: 265 ADE---------VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEE 324

Query: 347 RSQHMNKAKALKVICAKLYEMERRRIQSSRSKLRSEQYAVV 388
           R+Q  NKA+A +++ AKLYE+   +++  + K+R+E+ + V
Sbjct: 325 RTQIRNKARAFQLLRAKLYEI---KVREQQEKIRNERKSQV 353

[Close]
BLAST of Lsi04G007230 vs. TAIR10
Match: AT1G56350.1 (AT1G56350.1 Peptide chain release factor 2)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-39
Identity = 95/246 (38.62%), Postives = 148/246 (60.16%), Query Frame = 1 

Query: 135 EINGLRTLMEECTEDKDMLNMATEELDQAVQAE--KRL-------QQFLLKSLLPRDDAD 194
           ++ G+ T   E  E  DML +A EE D  +++E  K L       ++  L++LL  D+ D
Sbjct: 174 KMKGVMTFERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADN-D 233

Query: 195 ERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAIS 254
              C +EV+AG GG E++ +A  + +MY+ +AQ++ +   VVD    ++ G K A   ++
Sbjct: 234 PCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVN 293

Query: 255 GAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKN 314
           G   YG  K E G+HR+ R+   +   R HTS  +VA +P   +  T+       VE+ +
Sbjct: 294 GEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTR-------VEIND 353

Query: 315 EDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLY 372
            DLRI+ +RSGG+GGQHANTT+SAVR+ H+PTG+  + Q+ERSQH NKA A+ V+ ++L 
Sbjct: 354 SDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLD 411

[Close]
BLAST of Lsi04G007230 vs. TAIR10
Match: AT5G36170.1 (AT5G36170.1 high chlorophyll fluorescent 109)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-27
Identity = 103/366 (28.14%), Postives = 176/366 (48.09%), Query Frame = 1 

Query: 40  PLATPSF----RFYSKVYYNMKISSNLFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFL 99
           PL+ P+F    RF S + +  +  SNL    E ++ +  M+    + +    +E+ S  +
Sbjct: 40  PLSLPNFSSSSRFNSPIVFAAQ-ESNLSVSNENETSEWLMQDFYTLRKD---VEIASARV 99

Query: 100 LNIINRPEAPPAEYAKANKELK-----------KLRDTMDLINELRSKQKEINGLRTLME 159
             I         E    N E K           K ++T+  +N+L+ + + ++  +T++E
Sbjct: 100 EEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVE 159

Query: 160 EC------TEDKDMLNMATEELDQAVQAE--KRLQQFLLKSLLPRDDADERDCILEVRAG 219
           +       TE+ D  +++  E    +  E  K L +F L  LL     D+   ++ + AG
Sbjct: 160 DAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLS-GPYDKEGAVVYITAG 219

Query: 220 TGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIAAISGAGVYGKLKFE 279
            GG +A  +A  + +MY R+ +K+ +K +VV+++  +  G K A   I G   YG +  E
Sbjct: 220 AGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGE 279

Query: 280 SGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDVELKNEDLRIDTYRSG 339
            G HR+ R       G   TS   V  +P    +P +A    V +E+  EDL I   R+G
Sbjct: 280 KGTHRIVRQSPFNSKGLRQTSFSGVEVMPL---LPEEA----VGIEIPEEDLDISFTRAG 339

Query: 340 GSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVICAKLYEMERRRIQSSR 383
           G GGQ+ N   +AVR+TH+PTG+ V   +ERSQ  NK +AL  + AKL  +   +  +  
Sbjct: 340 GKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEI 393

[Close]
BLAST of Lsi04G007230 vs. TAIR10
Match: AT1G33330.1 (AT1G33330.1 Class I peptide chain release factor)

HSP 1 Score: 59.3 bits (142), Expect = 6.3e-09
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1 

Query: 300 DVELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKAL 358
           D EL  +  R++T+R  G GGQH N  +SAVR+ H+PTG+     ++RSQH N+A AL
Sbjct: 91  DEELMKQ-CRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASAL 147

[Close]
BLAST of Lsi04G007230 vs. NCBI nr
Match: gi|659090343|ref|XP_008445965.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis melo])

HSP 1 Score: 609.4 bits (1570), Expect = 4.6e-171
Identity = 325/383 (84.86%), Postives = 345/383 (90.08%), Query Frame = 1 

Query: 1   MRINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISS 60
           MRINRGTMRLVEQIRTLALHCR N +RI+ NP LP   +PL++PSFRFYSK         
Sbjct: 1   MRINRGTMRLVEQIRTLALHCRNNSSRITKNPSLPFHFDPLSSPSFRFYSK--------- 60

Query: 61  NLFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLR 120
                GEVQSQQLSMELIKIMEQRLTAIELR+TFLLNIINRPEAPPA+YAKANKELKKLR
Sbjct: 61  -----GEVQSQQLSMELIKIMEQRLTAIELRNTFLLNIINRPEAPPADYAKANKELKKLR 120

Query: 121 DTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLP 180
           DTM+LI ELRSKQKEINGLRTLMEEC+ED+DM +MATEEL+QAV+ EKRLQQ LLKSLLP
Sbjct: 121 DTMNLITELRSKQKEINGLRTLMEECSEDRDMFDMATEELEQAVEEEKRLQQLLLKSLLP 180

Query: 181 RDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEA 240
           RDDADERD ILEVRAGTGG+EASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEA
Sbjct: 181 RDDADERDSILEVRAGTGGDEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEA 240

Query: 241 IAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVD 300
           IAAISGAGVYG+LKFESGIHRVQRVPVTEKSGRVHTSA+SVA LPQADE         VD
Sbjct: 241 IAAISGAGVYGRLKFESGIHRVQRVPVTEKSGRVHTSAISVAILPQADE---------VD 300

Query: 301 VELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVI 360
           VELKNEDLRIDTYRSGGSGGQHANTTNSAVRV H+PTGL V+IQDERSQHMNKA+ALK+I
Sbjct: 301 VELKNEDLRIDTYRSGGSGGQHANTTNSAVRVIHIPTGLTVTIQDERSQHMNKARALKLI 360

Query: 361 CAKLYEMERRRIQSSRSKLRSEQ 384
           CAKLYEMERRRIQSSRSKLRSEQ
Sbjct: 361 CAKLYEMERRRIQSSRSKLRSEQ 360

[Close]
BLAST of Lsi04G007230 vs. NCBI nr
Match: gi|449435146|ref|XP_004135356.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis sativus])

HSP 1 Score: 595.9 bits (1535), Expect = 5.3e-167
Identity = 320/383 (83.55%), Postives = 342/383 (89.30%), Query Frame = 1 

Query: 1   MRINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISS 60
           MRINRGT+RLVEQ+RTLALHCR + + I+ NP L  P +PL++ S RFYSK         
Sbjct: 1   MRINRGTIRLVEQVRTLALHCRNDSSGITKNPLLSLPSDPLSSLSLRFYSK--------- 60

Query: 61  NLFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLR 120
                GEVQSQQLSMELIKIMEQRLTAIELR+TFLLNIINRPEAPPAEYAKANKELKKLR
Sbjct: 61  -----GEVQSQQLSMELIKIMEQRLTAIELRNTFLLNIINRPEAPPAEYAKANKELKKLR 120

Query: 121 DTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLP 180
           DTM+LI ELRSKQKEINGLRTLMEE +ED+DM +MATEEL+QAV+ EKRLQQFLLKSLLP
Sbjct: 121 DTMNLITELRSKQKEINGLRTLMEESSEDRDMFDMATEELEQAVEEEKRLQQFLLKSLLP 180

Query: 181 RDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEA 240
           RDDADERD ILEVRAGTGG+EASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEA
Sbjct: 181 RDDADERDSILEVRAGTGGDEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEA 240

Query: 241 IAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVD 300
           IAAISGAGVYG+LKFESGIHRVQRVPVTEK+GRVHTSA+SVA LPQADE         VD
Sbjct: 241 IAAISGAGVYGRLKFESGIHRVQRVPVTEKAGRVHTSAISVAILPQADE---------VD 300

Query: 301 VELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVI 360
           VELKNEDLRIDT+RSGGSGGQHANTTNSAVRV HVPTGL V+IQDERSQHMNKAKALK+I
Sbjct: 301 VELKNEDLRIDTFRSGGSGGQHANTTNSAVRVIHVPTGLTVTIQDERSQHMNKAKALKLI 360

Query: 361 CAKLYEMERRRIQSSRSKLRSEQ 384
           CAKLYEMERRRIQSSRSKLRSEQ
Sbjct: 361 CAKLYEMERRRIQSSRSKLRSEQ 360

[Close]
BLAST of Lsi04G007230 vs. NCBI nr
Match: gi|823187609|ref|XP_012490240.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial isoform X1 [Gossypium raimondii])

HSP 1 Score: 495.0 bits (1273), Expect = 1.3e-136
Identity = 271/382 (70.94%), Postives = 306/382 (80.10%), Query Frame = 1 

Query: 2   RINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISSN 61
           R++RG +  +  +R + +  ++NP   +   FL P I  +     R+YS           
Sbjct: 3   RLSRGLILCMNSLRQIQV-AKSNPHPRNQRSFLLPAIPNIFLSFCRYYST---------- 62

Query: 62  LFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRD 121
                E+Q Q LS +L+KIMEQRL AIE RS FL N +N+PEA P EY+KANKEL KLRD
Sbjct: 63  -----ELQPQ-LSTDLLKIMEQRLVAIEHRSAFLENFMNQPEASPTEYSKANKELHKLRD 122

Query: 122 TMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPR 181
           +MDLINELR+KQKEI+ LR+LM EC  DKDML MATE+L +A++ EKRLQ  LLKSLLPR
Sbjct: 123 SMDLINELRTKQKEIDSLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPR 182

Query: 182 DDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAI 241
           DDADERDCILEVRAGTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYKEA 
Sbjct: 183 DDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKEAS 242

Query: 242 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDV 301
           AAISGAGVYGKLKFESGIHRVQRVPVTEKSGR+HTSAVS+A LPQADE         VDV
Sbjct: 243 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRIHTSAVSIAVLPQADE---------VDV 302

Query: 302 ELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVIC 361
            L+NEDLRIDTYRSGGSGGQHANTTNSAVRVTH PTG+ V+IQDERSQHMNKAKALKV+C
Sbjct: 303 RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHFPTGITVTIQDERSQHMNKAKALKVLC 358

Query: 362 AKLYEMERRRIQSSRSKLRSEQ 384
           AKLYEMER RIQ+SRSKLRSEQ
Sbjct: 363 AKLYEMERSRIQTSRSKLRSEQ 358

[Close]
BLAST of Lsi04G007230 vs. NCBI nr
Match: gi|728841026|gb|KHG20469.1| (Peptide chain release factor 1 [Gossypium arboreum])

HSP 1 Score: 491.1 bits (1263), Expect = 1.8e-135
Identity = 269/382 (70.42%), Postives = 305/382 (79.84%), Query Frame = 1 

Query: 2   RINRGTMRLVEQIRTLALHCRTNPARISTNPFLPPPIEPLATPSFRFYSKVYYNMKISSN 61
           R++RG +  +  +R + +    +P   +   FL P I  +     R+YS           
Sbjct: 3   RLSRGLIPCMNSLRQIQVAKSPHPR--NQRSFLLPAIPNIFLSFCRYYST---------- 62

Query: 62  LFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKLRD 121
                E+Q Q LS +L+K+MEQRL AIE RS FL N +N+PEA P EY+KAN+EL KLRD
Sbjct: 63  -----ELQPQ-LSTDLLKVMEQRLAAIEHRSAFLENFMNQPEASPTEYSKANEELHKLRD 122

Query: 122 TMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLLPR 181
           +MDLINELR+KQKEI+GLR+LM EC  DKDML MATE+L +A++ EKRLQ  LLKSLLPR
Sbjct: 123 SMDLINELRTKQKEIDGLRSLMAECPNDKDMLEMATEDLGKALEEEKRLQNLLLKSLLPR 182

Query: 182 DDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAI 241
           DDADERDCILEVRAGTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYK+A 
Sbjct: 183 DDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKQAS 242

Query: 242 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLVDV 301
           AAISGAGVYGKLKFESGIHRVQRVPVTEKSGR+HTSAVSVA LPQADE         VDV
Sbjct: 243 AAISGAGVYGKLKFESGIHRVQRVPVTEKSGRIHTSAVSVAVLPQADE---------VDV 302

Query: 302 ELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKVIC 361
            L+NEDLRIDTYRSGGSGGQHANTTNSAVRVTH PTG+ V+IQDERSQHMNKAKALKV+C
Sbjct: 303 RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHFPTGITVTIQDERSQHMNKAKALKVLC 357

Query: 362 AKLYEMERRRIQSSRSKLRSEQ 384
           AKLYEMER RIQ+SRSKLRSEQ
Sbjct: 363 AKLYEMERSRIQTSRSKLRSEQ 357

[Close]
BLAST of Lsi04G007230 vs. NCBI nr
Match: gi|802692524|ref|XP_012082984.1| (PREDICTED: peptide chain release factor 1-like, mitochondrial [Jatropha curcas])

HSP 1 Score: 487.3 bits (1253), Expect = 2.6e-134
Identity = 271/384 (70.57%), Postives = 306/384 (79.69%), Query Frame = 1 

Query: 1   MRINRGTMRLVEQIRTLALHCRTNPARISTNPFL-PPPIEPLATPSFRFYSKVYYNMKIS 60
           MRI+RG    V  +R++    ++ PA   TNPF            +F   S+ Y      
Sbjct: 1   MRIDRGLKWSVNVVRSIK-QLQSTPAVSHTNPFYRKSSFTSAVANAFLLLSRSYST---- 60

Query: 61  SNLFKIGEVQSQQLSMELIKIMEQRLTAIELRSTFLLNIINRPEAPPAEYAKANKELKKL 120
                  E+QSQ LS +LI+IM+QRL+AIE RS +L N INRPEA P E A+ANKEL+K+
Sbjct: 61  -------ELQSQ-LSPDLIRIMDQRLSAIEHRSAYLENFINRPEASPTESARANKELRKI 120

Query: 121 RDTMDLINELRSKQKEINGLRTLMEECTEDKDMLNMATEELDQAVQAEKRLQQFLLKSLL 180
           R +MDLI ELRSKQKEI+ L +LM EC EDKDML+MA EEL QA++ EKRLQ  LLKSLL
Sbjct: 121 RGSMDLITELRSKQKEIHSLSSLMAECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLL 180

Query: 181 PRDDADERDCILEVRAGTGGEEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKE 240
           P+DDADERDCILEVRAGTGGEEASLFAMD+FKMYERY+QKKGWKFEVVDI ESDLKGYKE
Sbjct: 181 PKDDADERDCILEVRAGTGGEEASLFAMDVFKMYERYSQKKGWKFEVVDIAESDLKGYKE 240

Query: 241 AIAAISGAGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVATLPQADEVPTQATFFLV 300
           A AAISGAGV+GKLKFESGIHRVQRVPVTEKSGRVHTSAVSVA LPQADE         V
Sbjct: 241 ASAAISGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADE---------V 300

Query: 301 DVELKNEDLRIDTYRSGGSGGQHANTTNSAVRVTHVPTGLCVSIQDERSQHMNKAKALKV 360
           DV+L+N+DLRIDTYRSGGSGGQHANTTNSAVR+TH+PTG+ VSIQDERSQHMNKAKALKV
Sbjct: 301 DVQLRNDDLRIDTYRSGGSGGQHANTTNSAVRITHLPTGMTVSIQDERSQHMNKAKALKV 360

Query: 361 ICAKLYEMERRRIQSSRSKLRSEQ 384
           +CAKLYEMER RI +SRSKLRSEQ
Sbjct: 361 LCAKLYEMERSRIHTSRSKLRSEQ 362

The following BLAST results are available for this feature:
BLAST of Lsi04G007230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RF1_SPHWW7.6e-7347.84Peptide chain release factor 1 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 ... [more]
RF1_RICB88.4e-7249.64Peptide chain release factor 1 OS=Rickettsia bellii (strain OSU 85-389) GN=prfA ... [more]
RF1_BRUSU2.4e-7146.10Peptide chain release factor 1 OS=Brucella suis biovar 1 (strain 1330) GN=prfA P... [more]
RF1_BRUME2.4e-7146.10Peptide chain release factor 1 OS=Brucella melitensis biotype 1 (strain 16M / AT... [more]
RF1_BRUMB2.4e-7146.10Peptide chain release factor 1 OS=Brucella melitensis biotype 2 (strain ATCC 234... [more]
BLAST of Lsi04G007230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2SBQ4_GOSRA8.8e-13770.94Uncharacterized protein OS=Gossypium raimondii GN=B456_007G116300 PE=3 SV=1[more]
A0A0B0P8M4_GOSAR1.3e-13570.42Peptide chain release factor 1 OS=Gossypium arboreum GN=F383_25046 PE=3 SV=1[more]
A0A067JZX0_JATCU1.8e-13470.57Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14099 PE=3 SV=1[more]
A0A061DZH6_THECC3.1e-13470.42Peptide chain release factor, putative OS=Theobroma cacao GN=TCM_004929 PE=3 SV=... [more]
V4TWD1_9ROSI6.6e-13279.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020151mg PE=4 SV=1[more]
BLAST of Lsi04G007230 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47020.14.2e-13072.78 Peptide chain release factor 1[more]
AT3G62910.12.1e-5237.72 Peptide chain release factor 1[more]
AT1G56350.11.5e-3938.62 Peptide chain release factor 2[more]
AT5G36170.12.3e-2728.14 high chlorophyll fluorescent 109[more]
AT1G33330.16.3e-0948.28 Class I peptide chain release factor[more]
BLAST of Lsi04G007230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090343|ref|XP_008445965.1|4.6e-17184.86PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis melo][more]
gi|449435146|ref|XP_004135356.1|5.3e-16783.55PREDICTED: peptide chain release factor 1-like, mitochondrial [Cucumis sativus][more]
gi|823187609|ref|XP_012490240.1|1.3e-13670.94PREDICTED: peptide chain release factor 1-like, mitochondrial isoform X1 [Gossyp... [more]
gi|728841026|gb|KHG20469.1|1.8e-13570.42Peptide chain release factor 1 [Gossypium arboreum][more]
gi|802692524|ref|XP_012082984.1|2.6e-13470.57PREDICTED: peptide chain release factor 1-like, mitochondrial [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0016149translation release factor activity, codon specific
GO:0003747translation release factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
IPR005139PCRF
IPR000352Pep_chain_release_fac_I_II
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0006449 regulation of translational termination
biological_process GO:0006415 translational termination
cellular_component GO:0005840 ribosome
cellular_component GO:0018444 translation release factor complex
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016149 translation release factor activity, codon specific
molecular_function GO:0003747 translation release factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G007230.1Lsi04G007230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000352Peptide chain release factor class I/class IIPFAMPF00472RF-1coord: 300..384
score: 1.2
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 106..281
score: 1.7
IPR005139Peptide chain release factorSMARTSM00937PCRF_a_2coord: 141..256
score: 1.9
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 299..371
score: 1.2
NoneNo IPR availableunknownCoilCoilcoord: 109..149
scor
NoneNo IPR availableGENE3DG3DSA:1.20.58.410coord: 106..165
score: 1.
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 69..383
score: 9.0E
NoneNo IPR availablePANTHERPTHR11075:SF9PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATEDcoord: 69..383
score: 9.0E
NoneNo IPR availableunknownSSF75620Release factorcoord: 106..384
score: 4.45