CmaCh04G012650 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G012650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	GRAM domain-containing protein / ABA-responsive protein-related
Location	Cma_Chr04 : 6471746 .. 6472707 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGACATCTTGGAAGAAAAGTTGACAGATTCGTTAATGGAGTCTTTGAACGTGGTAAACTGCGATGTTTTCTTTTTCTCTTGATTTGAGAGAGAATCTCTCTCTGAATTTTACTTTCTCTCCTACATGATTATGATGATGGATTGGATCGTCCTCAAAATTTCCATTTCTAGACTTGTTTTCATGCAGGTGCGAATCGCAAAGTTGCTTATATGTTCATCTAATAAGCATAATTCAACCGGTTAAGCAAGAAAAGAAGGATCACAAAGCTTGTAGAACGCTAAAACCAAAAACTATCGCACTACTATTTGTTTCTCTATAAACAAAGATTGGCATTTTCGTTTTTCTTGTGTGCTAACGTATAACTCAAAAACCAAACTCGATTCAAATGATTACTTGCTTGATGGTTACAACGGAATGATGTCGTGCAGTTAAACTGTCACCGAACATCACCGAGAATTTGAAGGGAAAGCTGTGGTCTGGGGCAAGACTTGTTCAGTTTGGAGGAAATGAGAAGATTTTTCAGAAAATGTTCAATCTCAGCCAAGGAGAGAAGTTACTAAGTTGTTCACGCTGTTATTTGTCAACCACAGCAGGTCCCGTAGCAGGCCTCCTCTTTATCTCCACCCATGTGGTTGCCTTCTGCAGTGACAGACCAATCGTCGTCTCTTCTTCAGAAGGAGAACTGGGCAGATTGAACTACAAGGTAACATTATACATCCTTCAACATTCACAAACCCCTGTGGTTGCTAACAAGTTTTTTGTACTGTGCTTGATTCATCAGGTTATGATCCCATTGAAGAAGATGAAGAGAGTTAACCAAATAGAGCATATAAACAATCCGTCAAAGAAGTACATTCAAGTGGTGACTGTGGATGATTTTGATTTCTGGTTTATGGGTTTTCTGAATTATGAGAAAGCATTCAAGTTCCTCCAAAAGAAGGTTTCTAGAGATTGA

mRNA sequence

ATGTTTAGACATCTTGGAAGAAAAGTTGACAGATTCGTTAATGGAGTCTTTGAACGTGTTAAACTGTCACCGAACATCACCGAGAATTTGAAGGGAAAGCTGTGGTCTGGGGCAAGACTTGTTCAGTTTGGAGGAAATGAGAAGATTTTTCAGAAAATGTTCAATCTCAGCCAAGGAGAGAAGTTACTAAGTTGTTCACGCTGTTATTTGTCAACCACAGCAGGTCCCGTAGCAGGCCTCCTCTTTATCTCCACCCATGTGGTTGCCTTCTGCAGTGACAGACCAATCGTCGTCTCTTCTTCAGAAGGAGAACTGGGCAGATTGAACTACAAGGTTATGATCCCATTGAAGAAGATGAAGAGAGTTAACCAAATAGAGCATATAAACAATCCGTCAAAGAAGTACATTCAAGTGGTGACTGTGGATGATTTTGATTTCTGGTTTATGGGTTTTCTGAATTATGAGAAAGCATTCAAGTTCCTCCAAAAGAAGGTTTCTAGAGATTGA

Coding sequence (CDS)

ATGTTTAGACATCTTGGAAGAAAAGTTGACAGATTCGTTAATGGAGTCTTTGAACGTGTTAAACTGTCACCGAACATCACCGAGAATTTGAAGGGAAAGCTGTGGTCTGGGGCAAGACTTGTTCAGTTTGGAGGAAATGAGAAGATTTTTCAGAAAATGTTCAATCTCAGCCAAGGAGAGAAGTTACTAAGTTGTTCACGCTGTTATTTGTCAACCACAGCAGGTCCCGTAGCAGGCCTCCTCTTTATCTCCACCCATGTGGTTGCCTTCTGCAGTGACAGACCAATCGTCGTCTCTTCTTCAGAAGGAGAACTGGGCAGATTGAACTACAAGGTTATGATCCCATTGAAGAAGATGAAGAGAGTTAACCAAATAGAGCATATAAACAATCCGTCAAAGAAGTACATTCAAGTGGTGACTGTGGATGATTTTGATTTCTGGTTTATGGGTTTTCTGAATTATGAGAAAGCATTCAAGTTCCTCCAAAAGAAGGTTTCTAGAGATTGA

Protein sequence

MFRHLGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD

Homology

[Close]

BLAST of CmaCh04G012650 vs. Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.0e-48
Identity = 91/160 (56.88%), Postives = 124/160 (77.50%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NGV ++ K+ P +TE +K KL  GAR++Q GG EKIF+++F +S+GEKL    
Sbjct: 54  KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMY 113

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTTAGP+AGLLFIS+  +AFCS+R I V S +G++ R++YKV IPL K+ RVNQ +
Sbjct: 114 QCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQ 173

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 167
           +   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L+K +S
Sbjct: 174 NTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

[Close]

BLAST of CmaCh04G012650 vs. Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.6e-47
Identity = 90/160 (56.25%), Postives = 122/160 (76.25%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NGV ++ KL P +TE +K KL  GAR++Q GG EKI++++F +S  EKL    
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTTAGP+AGLLFIS+  +AFCS+R I V+S +GEL R++YKV IPL K+  VNQ +
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQ 174

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 167
           +   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L++ +S
Sbjct: 175 NTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

[Close]

BLAST of CmaCh04G012650 vs. Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-45
Identity = 84/162 (51.85%), Postives = 121/162 (74.69%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI++++F +   EKL    
Sbjct: 55  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 114

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTTAGP+AGLLFIS+  +AFCS+R I V+S +G L R++YKV IPL K+  VNQ +
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQ 174

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 169
           +   PS+KY+++VT+D+FDFWFMGF++Y+KAF  L+K ++ D
Sbjct: 175 NTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 216

[Close]

BLAST of CmaCh04G012650 vs. Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.9e-44
Identity = 82/162 (50.62%), Postives = 120/162 (74.07%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI++++F +   EKL    
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTT G +AGLLFIS+  +AFCS+R I V+S +G+L R++YKV IPL K+  VNQ +
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 169
           +   PS++Y++VVTVD++DFWFMGF++Y+KAF  L+K ++ D
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

[Close]

BLAST of CmaCh04G012650 vs. Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 1


Query: 1   MFRHLGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 60
           MF    RK +     ++  +K  P+++E   GK+   A+ +  GG E +F+++F     E
Sbjct: 96  MFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNE 155

Query: 61  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMK 120
            L     CYLSTT GPVAG +++S   VAFCSDRP+  ++  G+     Y+V++PL  + 
Sbjct: 156 TLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVA 215

Query: 121 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 167
            VN +     P +KYIQ+ TVD  DFWFMGF+NYEKA   L   VS
Sbjct: 216 TVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261

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BLAST of CmaCh04G012650 vs. TrEMBL
Match: A0A0A0KPM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577990 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.4e-65
Identity = 117/168 (69.64%), Postives = 142/168 (84.52%), Query Frame = 1


Query: 1   MFRHLGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 60
           M R LGR+   FVNG+ E VKLSPNI + +KGKLW G +L+QFGG+E IF KMFNL  G+
Sbjct: 1   MIRELGRRGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLLQFGGSENIFHKMFNLEHGD 60

Query: 61  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMK 120
           KLL+ + CYLSTTAGP+AGL+F+STHVVAFCSDRPI++SS  GE+G++ YKVMIP+ K+K
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLIFVSTHVVAFCSDRPIIISSPHGEIGKIFYKVMIPVNKVK 120

Query: 121 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 169
           RVNQ  ++NNP+KKYIQVVTVDDFDFWFMGFLN+EKAFKF+Q  VS D
Sbjct: 121 RVNQRNNVNNPAKKYIQVVTVDDFDFWFMGFLNHEKAFKFIQNGVSVD 168

[Close]

BLAST of CmaCh04G012650 vs. TrEMBL
Match: D7TY17_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g00320 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.1e-54
Identity = 102/163 (62.58%), Postives = 135/163 (82.82%), Query Frame = 1


Query: 5   LGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLS 64
           LG+K D FVNGV E V+L+PNI+E +KGKL  GAR++Q GG EKIF+++F + +GEKLL 
Sbjct: 55  LGKKADSFVNGVREHVRLAPNISETVKGKLSLGARILQVGGVEKIFKRLFRVREGEKLLK 114

Query: 65  CSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQ 124
            S+CYLSTTAGP+AGLLFIST  +AFCS+R I  SS+ GEL R++YKV+IPL+K+K  NQ
Sbjct: 115 ASQCYLSTTAGPIAGLLFISTDKIAFCSERAIKFSSANGELVRIHYKVLIPLRKIKIANQ 174

Query: 125 IEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSR 168
            E+   PS+KYI++VT D+F+FWFMGFLNY+KAFK+LQ+ +S+
Sbjct: 175 SENTKKPSQKYIEIVTTDNFEFWFMGFLNYQKAFKYLQQALSQ 217

[Close]

BLAST of CmaCh04G012650 vs. TrEMBL
Match: A0A061E267_THECC (GRAM domain-containing protein / ABA-responsive protein-related OS=Theobroma cacao GN=TCM_007675 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-53
Identity = 101/163 (61.96%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 5   LGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLS 64
           LG+K D F +GV E V+L P ITE +KGKL  GAR++Q GG EKIF+++F++ +GEKLL 
Sbjct: 63  LGKKADTFAHGVREHVRLGPKITETVKGKLSLGARILQVGGVEKIFKRLFSVREGEKLLK 122

Query: 65  CSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQ 124
             +CYLSTTAGP+AGLLF+S+  VAFCS+R I + S +GEL R++YKV+IPL+K+K VNQ
Sbjct: 123 ACQCYLSTTAGPIAGLLFVSSEKVAFCSERSIKIPSPKGELPRVHYKVLIPLEKIKGVNQ 182

Query: 125 IEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSR 168
            E+I  PS+KYI++VTVD FDFWFMGFLNY KAFK+LQ+ +S+
Sbjct: 183 SENIKKPSQKYIEMVTVDGFDFWFMGFLNYRKAFKYLQQAISQ 225

[Close]

BLAST of CmaCh04G012650 vs. TrEMBL
Match: A0A067L7J7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24479 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-52
Identity = 96/163 (58.90%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 5   LGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLS 64
           LG+K D+F +G+ E V+L   ITE LKGKL  GAR++Q GG +K+F+++F + +GEKLL 
Sbjct: 63  LGKKADKFAHGIREHVRLGAKITETLKGKLSLGARILQVGGVKKVFRQLFTVREGEKLLK 122

Query: 65  CSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQ 124
             +CYLSTTAGP+AGL+FIST  +AFCS+R I +SS+EG++ R++YKV+IPL+K+K  NQ
Sbjct: 123 ACQCYLSTTAGPIAGLVFISTDKIAFCSERSIKLSSTEGKIARIHYKVVIPLRKIKTANQ 182

Query: 125 IEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSR 168
            E++  PS+KYI++VTVDDFDFW MGFLNY+KAFK LQ+ +S+
Sbjct: 183 TENVKKPSQKYIEIVTVDDFDFWLMGFLNYQKAFKCLQQAISQ 225

[Close]

BLAST of CmaCh04G012650 vs. TrEMBL
Match: U5GBC9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09050g PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-52
Identity = 97/167 (58.08%), Postives = 134/167 (80.24%), Query Frame = 1


Query: 1   MFRHLGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 60
           M   LG+K D F NGV E V+L P I+E +KGKL  GA+++Q GG EKIF+++F +S+ E
Sbjct: 52  MMNKLGKKADNFANGVREHVRLGPKISETVKGKLSLGAKILQVGGVEKIFKQLFVVSEDE 111

Query: 61  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMK 120
           KLL  S+CYLSTTAGP+AGLLF+ST  VAFCS+R I +SS  G+  R++YKV++PLKK+K
Sbjct: 112 KLLKASQCYLSTTAGPIAGLLFVSTEKVAFCSERSIKISSPSGKSVRVHYKVLVPLKKIK 171

Query: 121 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSR 168
            +NQ E++  PS+KY+++VTVDDF+FWFMGF+NY+K FK+LQ+ +S+
Sbjct: 172 MLNQSENVKKPSQKYLELVTVDDFEFWFMGFINYQKTFKYLQQAMSQ 218

[Close]

BLAST of CmaCh04G012650 vs. TAIR10
Match: AT5G08350.1 (AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 191.8 bits (486), Expect = 3.4e-49
Identity = 91/160 (56.88%), Postives = 124/160 (77.50%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NGV ++ K+ P +TE +K KL  GAR++Q GG EKIF+++F +S+GEKL    
Sbjct: 54  KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMY 113

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTTAGP+AGLLFIS+  +AFCS+R I V S +G++ R++YKV IPL K+ RVNQ +
Sbjct: 114 QCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQ 173

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 167
           +   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L+K +S
Sbjct: 174 NTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

[Close]

BLAST of CmaCh04G012650 vs. TAIR10
Match: AT5G23370.1 (AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 188.3 bits (477), Expect = 3.7e-48
Identity = 90/160 (56.25%), Postives = 122/160 (76.25%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NGV ++ KL P +TE +K KL  GAR++Q GG EKI++++F +S  EKL    
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTTAGP+AGLLFIS+  +AFCS+R I V+S +GEL R++YKV IPL K+  VNQ +
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQ 174

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 167
           +   PS+KY++VVTVD FDFWFMGFL+Y+KAF  L++ +S
Sbjct: 175 NTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

[Close]

BLAST of CmaCh04G012650 vs. TAIR10
Match: AT5G23350.1 (AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 184.1 bits (466), Expect = 7.0e-47
Identity = 84/162 (51.85%), Postives = 121/162 (74.69%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI++++F +   EKL    
Sbjct: 117 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 176

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTTAGP+AGLLFIS+  +AFCS+R I V+S +G L R++YKV IPL K+  VNQ +
Sbjct: 177 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQ 236

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 169
           +   PS+KY+++VT+D+FDFWFMGF++Y+KAF  L+K ++ D
Sbjct: 237 NTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 278

[Close]

BLAST of CmaCh04G012650 vs. TAIR10
Match: AT5G23360.1 (AT5G23360.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 178.3 bits (451), Expect = 3.9e-45
Identity = 82/162 (50.62%), Postives = 120/162 (74.07%), Query Frame = 1


Query: 7   RKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLSCS 66
           +K D F NG  ++ KL P +TE +K KL  GA+++Q GG EKI++++F +   EKL    
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 67  RCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQIE 126
           +CYLSTT G +AGLLFIS+  +AFCS+R I V+S +G+L R++YKV IPL K+  VNQ +
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166

Query: 127 HINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 169
           +   PS++Y++VVTVD++DFWFMGF++Y+KAF  L+K ++ D
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

[Close]

BLAST of CmaCh04G012650 vs. TAIR10
Match: AT5G13200.1 (AT5G13200.1 GRAM domain family protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 1


Query: 1   MFRHLGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 60
           MF    RK +     ++  +K  P+++E   GK+   A+ +  GG E +F+++F     E
Sbjct: 96  MFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNE 155

Query: 61  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMK 120
            L     CYLSTT GPVAG +++S   VAFCSDRP+  ++  G+     Y+V++PL  + 
Sbjct: 156 TLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVA 215

Query: 121 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVS 167
            VN +     P +KYIQ+ TVD  DFWFMGF+NYEKA   L   VS
Sbjct: 216 TVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261

[Close]

BLAST of CmaCh04G012650 vs. NCBI nr
Match: gi|659090209|ref|XP_008445893.1| (PREDICTED: GEM-like protein 4 [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 1.7e-66
Identity = 122/168 (72.62%), Postives = 143/168 (85.12%), Query Frame = 1


Query: 1   MFRHLGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 60
           M R LGRK   FVNG+ E VKLSPNI + +KGKLW G +LVQFGG+EKIF KMFNL QG+
Sbjct: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGD 60

Query: 61  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMK 120
           KLL+ + CYLSTTAGP+AGL+F+STHVVAFCSDRPI++SS  GE+G++ YKVMIP+ K+K
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVK 120

Query: 121 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 169
           RVNQ  + NNP+KKYIQVVTVDDFDFWFMGFLNYEK FKF+QK VS D
Sbjct: 121 RVNQRNNENNPAKKYIQVVTVDDFDFWFMGFLNYEKTFKFIQKGVSMD 168

[Close]

BLAST of CmaCh04G012650 vs. NCBI nr
Match: gi|449458799|ref|XP_004147134.1| (PREDICTED: GEM-like protein 4 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 9.2e-65
Identity = 117/168 (69.64%), Postives = 142/168 (84.52%), Query Frame = 1


Query: 1   MFRHLGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGE 60
           M R LGR+   FVNG+ E VKLSPNI + +KGKLW G +L+QFGG+E IF KMFNL  G+
Sbjct: 1   MIRELGRRGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLLQFGGSENIFHKMFNLEHGD 60

Query: 61  KLLSCSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMK 120
           KLL+ + CYLSTTAGP+AGL+F+STHVVAFCSDRPI++SS  GE+G++ YKVMIP+ K+K
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLIFVSTHVVAFCSDRPIIISSPHGEIGKIFYKVMIPVNKVK 120

Query: 121 RVNQIEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSRD 169
           RVNQ  ++NNP+KKYIQVVTVDDFDFWFMGFLN+EKAFKF+Q  VS D
Sbjct: 121 RVNQRNNVNNPAKKYIQVVTVDDFDFWFMGFLNHEKAFKFIQNGVSVD 168

[Close]

BLAST of CmaCh04G012650 vs. NCBI nr
Match: gi|225463675|ref|XP_002275935.1| (PREDICTED: GEM-like protein 4 [Vitis vinifera])

HSP 1 Score: 218.8 bits (556), Expect = 7.3e-54
Identity = 102/163 (62.58%), Postives = 135/163 (82.82%), Query Frame = 1


Query: 5   LGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLS 64
           LG+K D FVNGV E V+L+PNI+E +KGKL  GAR++Q GG EKIF+++F + +GEKLL 
Sbjct: 55  LGKKADSFVNGVREHVRLAPNISETVKGKLSLGARILQVGGVEKIFKRLFRVREGEKLLK 114

Query: 65  CSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQ 124
            S+CYLSTTAGP+AGLLFIST  +AFCS+R I  SS+ GEL R++YKV+IPL+K+K  NQ
Sbjct: 115 ASQCYLSTTAGPIAGLLFISTDKIAFCSERAIKFSSANGELVRIHYKVLIPLRKIKIANQ 174

Query: 125 IEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSR 168
            E+   PS+KYI++VT D+F+FWFMGFLNY+KAFK+LQ+ +S+
Sbjct: 175 SENTKKPSQKYIEIVTTDNFEFWFMGFLNYQKAFKYLQQALSQ 217

[Close]

BLAST of CmaCh04G012650 vs. NCBI nr
Match: gi|590689422|ref|XP_007043224.1| (GRAM domain-containing protein / ABA-responsive protein-related [Theobroma cacao])

HSP 1 Score: 215.7 bits (548), Expect = 6.2e-53
Identity = 101/163 (61.96%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 5   LGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLS 64
           LG+K D F +GV E V+L P ITE +KGKL  GAR++Q GG EKIF+++F++ +GEKLL 
Sbjct: 63  LGKKADTFAHGVREHVRLGPKITETVKGKLSLGARILQVGGVEKIFKRLFSVREGEKLLK 122

Query: 65  CSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQ 124
             +CYLSTTAGP+AGLLF+S+  VAFCS+R I + S +GEL R++YKV+IPL+K+K VNQ
Sbjct: 123 ACQCYLSTTAGPIAGLLFVSSEKVAFCSERSIKIPSPKGELPRVHYKVLIPLEKIKGVNQ 182

Query: 125 IEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSR 168
            E+I  PS+KYI++VTVD FDFWFMGFLNY KAFK+LQ+ +S+
Sbjct: 183 SENIKKPSQKYIEMVTVDGFDFWFMGFLNYRKAFKYLQQAISQ 225

[Close]

BLAST of CmaCh04G012650 vs. NCBI nr
Match: gi|645228617|ref|XP_008221081.1| (PREDICTED: GEM-like protein 4 [Prunus mume])

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 100/163 (61.35%), Postives = 131/163 (80.37%), Query Frame = 1


Query: 5   LGRKVDRFVNGVFERVKLSPNITENLKGKLWSGARLVQFGGNEKIFQKMFNLSQGEKLLS 64
           LG+K D F +GV E VKL P ITE +KGKL  GA+++Q GG EK+F+  F++  GEKLL 
Sbjct: 64  LGKKADSFAHGVKEHVKLGPKITETVKGKLSLGAKIIQVGGLEKVFKHAFSVRSGEKLLK 123

Query: 65  CSRCYLSTTAGPVAGLLFISTHVVAFCSDRPIVVSSSEGELGRLNYKVMIPLKKMKRVNQ 124
            S+CYLSTTAGP+AGLLFIST  +AFCS+R I +SSS GEL RL+YKV+IP+ K+KRVNQ
Sbjct: 124 ASQCYLSTTAGPIAGLLFISTDKIAFCSERSIKLSSSNGELIRLHYKVVIPVNKIKRVNQ 183

Query: 125 IEHINNPSKKYIQVVTVDDFDFWFMGFLNYEKAFKFLQKKVSR 168
            E++  PS+KYI++VTVD+FDFWFMG LNY+K  K+L++ +S+
Sbjct: 184 SENVKKPSQKYIEIVTVDNFDFWFMGILNYQKTLKYLEEAISQ 226

The following BLAST results are available for this feature:

BLAST of CmaCh04G012650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GEML4_ARATH	6.0e-48	56.88	GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1	[more]
GEML8_ARATH	6.6e-47	56.25	Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1	[more]
GEML6_ARATH	1.3e-45	51.85	GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2	[more]
GEML7_ARATH	6.9e-44	50.62	GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1	[more]
GEML5_ARATH	1.9e-30	40.36	GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1	[more]

BLAST of CmaCh04G012650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPM0_CUCSA	6.4e-65	69.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577990 PE=4 SV=1	[more]
D7TY17_VITVI	5.1e-54	62.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g00320 PE=4 SV=...	[more]
A0A061E267_THECC	4.3e-53	61.96	GRAM domain-containing protein / ABA-responsive protein-related OS=Theobroma cac...	[more]
A0A067L7J7_JATCU	2.8e-52	58.90	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24479 PE=4 SV=1	[more]
U5GBC9_POPTR	3.7e-52	58.08	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09050g PE=4 SV=1	[more]

BLAST of CmaCh04G012650 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08350.1	3.4e-49	56.88	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23370.1	3.7e-48	56.25	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23350.1	7.0e-47	51.85	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23360.1	3.9e-45	50.62	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G13200.1	1.1e-31	40.36	GRAM domain family protein	[more]

BLAST of CmaCh04G012650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090209\|ref\|XP_008445893.1\|	1.7e-66	72.62	PREDICTED: GEM-like protein 4 [Cucumis melo]	[more]
gi\|449458799\|ref\|XP_004147134.1\|	9.2e-65	69.64	PREDICTED: GEM-like protein 4 [Cucumis sativus]	[more]
gi\|225463675\|ref\|XP_002275935.1\|	7.3e-54	62.58	PREDICTED: GEM-like protein 4 [Vitis vinifera]	[more]
gi\|590689422\|ref\|XP_007043224.1\|	6.2e-53	61.96	GRAM domain-containing protein / ABA-responsive protein-related [Theobroma cacao...	[more]
gi\|645228617\|ref\|XP_008221081.1\|	1.4e-52	61.35	PREDICTED: GEM-like protein 4 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004182	GRAM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G012650.1	CmaCh04G012650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 49..125 score: 1.4
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 48..126 score: 5.6
None	No IPR available	PANTHER	PTHR31969	FAMILY NOT NAMED	coord: 1..167 score: 3.1
None	No IPR available	PANTHER	PTHR31969:SF1	GEM-LIKE PROTEIN 4-RELATED	coord: 1..167 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G012650	Cucsa.280920	Cucumber (Gy14) v1	cgycmaB0779
CmaCh04G012650	Cla020045	Watermelon (97103) v1	cmawmB723
CmaCh04G012650	Csa5G577990	Cucumber (Chinese Long) v2	cmacuB726
CmaCh04G012650	ClCG02G014170	Watermelon (Charleston Gray)	cmawcgB641
CmaCh04G012650	CSPI05G20270	Wild cucumber (PI 183967)	cmacpiB733
CmaCh04G012650	CmoCh18G008150	Cucurbita moschata (Rifu)	cmacmoB706
CmaCh04G012650	CmoCh04G023400	Cucurbita moschata (Rifu)	cmacmoB745
CmaCh04G012650	CmoCh04G013360	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G012650	Lsi04G007830	Bottle gourd (USVL1VR-Ls)	cmalsiB676
CmaCh04G012650	Lsi09G008560	Bottle gourd (USVL1VR-Ls)	cmalsiB629
CmaCh04G012650	Cp4.1LG09g04850	Cucurbita pepo (Zucchini)	cmacpeB700
CmaCh04G012650	Cp4.1LG01g10160	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G012650	MELO3C005069.2	Melon (DHL92) v3.6.1	cmamedB719
CmaCh04G012650	MELO3C011758.2	Melon (DHL92) v3.6.1	cmamedB739
CmaCh04G012650	CsaV3_5G029030	Cucumber (Chinese Long) v3	cmacucB0863
CmaCh04G012650	Cla97C02G039930	Watermelon (97103) v2	cmawmbB740
CmaCh04G012650	Bhi07G000909	Wax gourd	cmawgoB0905
CmaCh04G012650	CsGy5G019800	Cucumber (Gy14) v2	cgybcmaB650

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G012650	CmaCh18G008130	Cucurbita maxima (Rimu)	cmacmaB402

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G012650	Wax gourd	cmawgoB0892
CmaCh04G012650	Cucurbita maxima (Rimu)	cmacmaB538
CmaCh04G012650	Melon (DHL92) v3.5.1	cmameB633
CmaCh04G012650	Melon (DHL92) v3.5.1	cmameB652
CmaCh04G012650	Silver-seed gourd	carcmaB0666
CmaCh04G012650	Silver-seed gourd	carcmaB1015
CmaCh04G012650	Silver-seed gourd	carcmaB1170