CmaCh04G012490 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G012490
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionzinc ion binding;nucleic acid binding
LocationCma_Chr04 : 6404833 .. 6406587 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTTCAATCCGACTACCAACTCACTGGCGCCGGCGACGATGAAGCCGCCGCCAGAAACAGGAAAAAGGCCATCGTCTGTGAGCTCTCTGCCTCTCAGACTGCTCGTATTACTCAACAGTTCGATCACTCTTTCATTGCTTGGATCTTCGGAAAGGACGTCCGTCCATGGAGAATCGCGTCTCTTCTTCGCCGTCATCTTTGTCTCACCGGAACTGTTAAGGTCTTTGAGCTAGGACTTGGCTATTTCGTGCTTAAATTCTGTGAGACTGACTTTTTAGCTTTACAAGACGTTCCGTGGTCAGTTCCTAATCTCTGCATCCATGTGTCTCCATGGACTCCTGATTTCAAGCCATCGGAAACCATCCTTTCCTCTGTTGATGTTTGGGTTCGCCTACATGAGCTCTCCATCGAGTATTACGACGACGAAGTTCTGCAAAAAATTGCAGCGGCCATCGGCGGCGATCTTGTGAAGATCGATCCGGTAACTAAAAACCGCTTGAAATGTAAGTTCGCTCGTATTTGTGTTCGAGTAAATTTGTGTGATCCTCTTCCATCGATGATTAGACTTGGTAAAATTAGGCAAGAAATTGAGTATGAAGGTTTTGAGTTGCTGTGCCCTAATTGTAGCCGTGTTGATGGTTTGAGACATAATTGTTTGAATTTGAAAATTCCTTCTGGTTTTTCTGGATTCAATCCCCATAGAGATAAACCCCACCACCATGGAGCTCGTTCTTTTAAGCAGCCGTTGATTCCTTCTGAATCTTCAGCACCATCACCTCGGGGATCCAGATTCCAAGTTCTTGATTTGAATTCGAATGAGTGGCCTAGCCTTGGTGAATCTGGAAAAGCAGGTACGAGTATAAGAACAAGTTCTTCACCTGTTCATGTGAAAGATAAAGCAATTGCAAAGAAAAAGGAGAAATGTGGAGACTCTGTTCAACCATTGCCTAAAGAATCTTCAAGAGTTACCATTAAAGATCAGTTGAAGGCTGCAAAAACCAGCAACAACCCCACCGTGAATGAGCAACCCCCATCACCAACTCCATGCATTCTACCCCTGCAACCATGTCCTGCTTCTGAGGCTGTCCTCGAGTTCCATTCAGCTGCCATCCAACGCTCGACGAGAACGAAAGAGATAACCAGCGTGCCGTCTAAAGAGATCAGTGTCGATAGTCGCCCCACTGTTTACACGATCGACCCGAAGATCACTAGCCTTGACATTGCTTTATCAGAGACACGAACAACCTCAATGCCAAACCAAATTCAATATGCAATCGAGTTCGTTCCGACTATGAGAGATGGCAACAAGGGCGGAGTTGATTTGGGATCAGAATCATGTGGTAAGAAGATTTTGTGCTGGAAGTTTCATTGGACTGACAATGAGAAGCTAATACGAGCATTGAAAGATTTGATTAAGCTACACGAGCCAAGCATTGTGCTGATATTTGGCACCAAGATCAGTGGTGCTGATGTGGATAAGGTAGTGCAGGAGCTCCCTTTCTGCTATTCTTACTACAGAAAGCCTGATGGCTACAATGGTGGGGTTTGGCTGTTATTGTCTAACCAAGATGTTGAAACTAAAGTGAACTCATGCAGCCCACAACAGGTTTGTGCATCAATATATTTTGATTCTAAAACCACTGTAGCAGCGTTTAATCCTTCAGGTGTGGACACCAAAACGTCGTCGGGACCGTGGGGGTCGCCGTTCTTCCATACTCCGACGAACTGGATGACTTCAATGGCATACTGA

mRNA sequence

ATGGCGCTTCAATCCGACTACCAACTCACTGGCGCCGGCGACGATGAAGCCGCCGCCAGAAACAGGAAAAAGGCCATCGTCTGTGAGCTCTCTGCCTCTCAGACTGCTCGTATTACTCAACAGTTCGATCACTCTTTCATTGCTTGGATCTTCGGAAAGGACGTCCGTCCATGGAGAATCGCGTCTCTTCTTCGCCGTCATCTTTGTCTCACCGGAACTGTTAAGGTCTTTGAGCTAGGACTTGGCTATTTCGTGCTTAAATTCTGTGAGACTGACTTTTTAGCTTTACAAGACGTTCCGTGGTCAGTTCCTAATCTCTGCATCCATGTGTCTCCATGGACTCCTGATTTCAAGCCATCGGAAACCATCCTTTCCTCTGTTGATGTTTGGGTTCGCCTACATGAGCTCTCCATCGAGTATTACGACGACGAAGTTCTGCAAAAAATTGCAGCGGCCATCGGCGGCGATCTTGTGAAGATCGATCCGGTAACTAAAAACCGCTTGAAATGTAAGTTCGCTCGTATTTGTGTTCGAGTAAATTTGTGTGATCCTCTTCCATCGATGATTAGACTTGGTAAAATTAGGCAAGAAATTGAGTATGAAGGTTTTGAGTTGCTGTGCCCTAATTGTAGCCGTGTTGATGGTTTGAGACATAATTGTTTGAATTTGAAAATTCCTTCTGGTTTTTCTGGATTCAATCCCCATAGAGATAAACCCCACCACCATGGAGCTCGTTCTTTTAAGCAGCCGTTGATTCCTTCTGAATCTTCAGCACCATCACCTCGGGGATCCAGATTCCAAGTTCTTGATTTGAATTCGAATGAGTGGCCTAGCCTTGGTGAATCTGGAAAAGCAGGTACGAGTATAAGAACAAGTTCTTCACCTGTTCATGTGAAAGATAAAGCAATTGCAAAGAAAAAGGAGAAATGTGGAGACTCTGTTCAACCATTGCCTAAAGAATCTTCAAGAGTTACCATTAAAGATCAGTTGAAGGCTGCAAAAACCAGCAACAACCCCACCGTGAATGAGCAACCCCCATCACCAACTCCATGCATTCTACCCCTGCAACCATGTCCTGCTTCTGAGGCTGTCCTCGAGTTCCATTCAGCTGCCATCCAACGCTCGACGAGAACGAAAGAGATAACCAGCGTGCCGTCTAAAGAGATCAGTGTCGATAGTCGCCCCACTGTTTACACGATCGACCCGAAGATCACTAGCCTTGACATTGCTTTATCAGAGACACGAACAACCTCAATGCCAAACCAAATTCAATATGCAATCGAGTTCGTTCCGACTATGAGAGATGGCAACAAGGGCGGAGTTGATTTGGGATCAGAATCATGTGGTAAGAAGATTTTGTGCTGGAAGTTTCATTGGACTGACAATGAGAAGCTAATACGAGCATTGAAAGATTTGATTAAGCTACACGAGCCAAGCATTGTGCTGATATTTGGCACCAAGATCAGTGGTGCTGATGTGGATAAGGTAGTGCAGGAGCTCCCTTTCTGCTATTCTTACTACAGAAAGCCTGATGGCTACAATGGTGGGGTTTGGCTGTTATTGTCTAACCAAGATGTTGAAACTAAAGTGAACTCATGCAGCCCACAACAGGTTTGTGCATCAATATATTTTGATTCTAAAACCACTGTAGCAGCGTTTAATCCTTCAGGTGTGGACACCAAAACGTCGTCGGGACCGTGGGGGTCGCCGTTCTTCCATACTCCGACGAACTGGATGACTTCAATGGCATACTGA

Coding sequence (CDS)

ATGGCGCTTCAATCCGACTACCAACTCACTGGCGCCGGCGACGATGAAGCCGCCGCCAGAAACAGGAAAAAGGCCATCGTCTGTGAGCTCTCTGCCTCTCAGACTGCTCGTATTACTCAACAGTTCGATCACTCTTTCATTGCTTGGATCTTCGGAAAGGACGTCCGTCCATGGAGAATCGCGTCTCTTCTTCGCCGTCATCTTTGTCTCACCGGAACTGTTAAGGTCTTTGAGCTAGGACTTGGCTATTTCGTGCTTAAATTCTGTGAGACTGACTTTTTAGCTTTACAAGACGTTCCGTGGTCAGTTCCTAATCTCTGCATCCATGTGTCTCCATGGACTCCTGATTTCAAGCCATCGGAAACCATCCTTTCCTCTGTTGATGTTTGGGTTCGCCTACATGAGCTCTCCATCGAGTATTACGACGACGAAGTTCTGCAAAAAATTGCAGCGGCCATCGGCGGCGATCTTGTGAAGATCGATCCGGTAACTAAAAACCGCTTGAAATGTAAGTTCGCTCGTATTTGTGTTCGAGTAAATTTGTGTGATCCTCTTCCATCGATGATTAGACTTGGTAAAATTAGGCAAGAAATTGAGTATGAAGGTTTTGAGTTGCTGTGCCCTAATTGTAGCCGTGTTGATGGTTTGAGACATAATTGTTTGAATTTGAAAATTCCTTCTGGTTTTTCTGGATTCAATCCCCATAGAGATAAACCCCACCACCATGGAGCTCGTTCTTTTAAGCAGCCGTTGATTCCTTCTGAATCTTCAGCACCATCACCTCGGGGATCCAGATTCCAAGTTCTTGATTTGAATTCGAATGAGTGGCCTAGCCTTGGTGAATCTGGAAAAGCAGGTACGAGTATAAGAACAAGTTCTTCACCTGTTCATGTGAAAGATAAAGCAATTGCAAAGAAAAAGGAGAAATGTGGAGACTCTGTTCAACCATTGCCTAAAGAATCTTCAAGAGTTACCATTAAAGATCAGTTGAAGGCTGCAAAAACCAGCAACAACCCCACCGTGAATGAGCAACCCCCATCACCAACTCCATGCATTCTACCCCTGCAACCATGTCCTGCTTCTGAGGCTGTCCTCGAGTTCCATTCAGCTGCCATCCAACGCTCGACGAGAACGAAAGAGATAACCAGCGTGCCGTCTAAAGAGATCAGTGTCGATAGTCGCCCCACTGTTTACACGATCGACCCGAAGATCACTAGCCTTGACATTGCTTTATCAGAGACACGAACAACCTCAATGCCAAACCAAATTCAATATGCAATCGAGTTCGTTCCGACTATGAGAGATGGCAACAAGGGCGGAGTTGATTTGGGATCAGAATCATGTGGTAAGAAGATTTTGTGCTGGAAGTTTCATTGGACTGACAATGAGAAGCTAATACGAGCATTGAAAGATTTGATTAAGCTACACGAGCCAAGCATTGTGCTGATATTTGGCACCAAGATCAGTGGTGCTGATGTGGATAAGGTAGTGCAGGAGCTCCCTTTCTGCTATTCTTACTACAGAAAGCCTGATGGCTACAATGGTGGGGTTTGGCTGTTATTGTCTAACCAAGATGTTGAAACTAAAGTGAACTCATGCAGCCCACAACAGGTTTGTGCATCAATATATTTTGATTCTAAAACCACTGTAGCAGCGTTTAATCCTTCAGGTGTGGACACCAAAACGTCGTCGGGACCGTGGGGGTCGCCGTTCTTCCATACTCCGACGAACTGGATGACTTCAATGGCATACTGA

Protein sequence

MALQSDYQLTGAGDDEAAARNRKKAIVCELSASQTARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGYFVLKFCETDFLALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDDEVLQKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGFELLCPNCSRVDGLRHNCLNLKIPSGFSGFNPHRDKPHHHGARSFKQPLIPSESSAPSPRGSRFQVLDLNSNEWPSLGESGKAGTSIRTSSSPVHVKDKAIAKKKEKCGDSVQPLPKESSRVTIKDQLKAAKTSNNPTVNEQPPSPTPCILPLQPCPASEAVLEFHSAAIQRSTRTKEITSVPSKEISVDSRPTVYTIDPKITSLDIALSETRTTSMPNQIQYAIEFVPTMRDGNKGGVDLGSESCGKKILCWKFHWTDNEKLIRALKDLIKLHEPSIVLIFGTKISGADVDKVVQELPFCYSYYRKPDGYNGGVWLLLSNQDVETKVNSCSPQQVCASIYFDSKTTVAAFNPSGVDTKTSSGPWGSPFFHTPTNWMTSMAY
Homology
[Close]
BLAST of CmaCh04G012490 vs. TrEMBL
Match: A0A0A0KLB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175790 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 6.3e-192
Identity = 388/659 (58.88%), Postives = 444/659 (67.37%), Query Frame = 1 

Query: 1   MALQSDYQLTGAGDDEAAARN---RKKAIV-----------------------CELSASQ 60
           MA QS +  TGAGDDEAAARN   RKK  V                       C L+ S+
Sbjct: 1   MAFQSGHPPTGAGDDEAAARNYLSRKKPKVPPPIPPSSDFHSRRSTTIATVCNCNLTPSE 60

Query: 61  TARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGYFVLKFCETDFL 120
           T RITQQF HS IA + GKD RP ++A+ LR HL LT  VKVF+LGLGYFVLKF ETD+L
Sbjct: 61  TTRITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQLGLGYFVLKFSETDYL 120

Query: 121 ALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDDEVLQKIAAAIG 180
           AL+D+PWS+PNLCIH  PWTPDFKPSE I SSV+VW+RL ELSIEYYD  +L++IA AIG
Sbjct: 121 ALEDLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPELSIEYYDVGILKRIADAIG 180

Query: 181 GDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGFELLCPNCSRVD 240
             LVKIDPVT++R KCKFAR C+ VNLCDPLPSMI LG++RQ IEYEGFE LC  C+RV 
Sbjct: 181 DPLVKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQRIEYEGFE-LCAKCNRVG 240

Query: 241 GLRHNCL----------NLKIPSGFSGFNPHRDKPHHHGARSF---------KQPLIPSE 300
            LRH+C           +L  PSG  GFNPH D+PHH   R F         KQPLIP  
Sbjct: 241 DLRHDCSSLNNPSLNNPSLNNPSGSYGFNPHGDEPHHSVTRDFKEIGSTSNSKQPLIPES 300

Query: 301 SSAPSPRGSRF----QVLDLNSNEWPSL--GESGKAGTSIRTSSSPVHVKDKAIAKKKEK 360
           S   +   SRF      LDL   +WP+L   ESGKAG+ +R SS  VHVKDK I KKKEK
Sbjct: 301 SPVSAWESSRFIEKNPPLDLKLIDWPNLPKRESGKAGSGVRISSPRVHVKDKEIPKKKEK 360

Query: 361 CGDSVQ---PLPKESSRVTIK-------------DQLKAAKTSNNPTV---NEQPPSPTP 420
           C  SVQ    LPK+ S +TIK             D+LK  KT N+  +   N QPPSPT 
Sbjct: 361 CEISVQRLPNLPKQCSTITIKAPELKRVVPSVVEDRLKDTKTINSTMIADHNSQPPSPTA 420

Query: 421 CILPLQPCPASEAVLEFHSAAIQRSTRTKEITSVPSKEISVDSRPTVYTIDP-KITSLDI 480
            I  LQP PASEA L+F S AI   TR +EI + PSK I+  S PTVYTIDP KITSL+I
Sbjct: 421 SIPFLQPSPASEATLKFLSDAILCLTRKEEICNSPSKVINDSSFPTVYTIDPKKITSLNI 480

Query: 481 ALSETRTTSMPNQIQYAIEFVPTMRDGNKGG----VDLGSESCGKKILCWKFHWTDNEKL 540
           ALSE +T          IE VPTM+ G++GG    V+ GSE C KKIL WKFH  DN KL
Sbjct: 481 ALSEVQT----------IELVPTMKGGDEGGVGSEVESGSEPCAKKILVWKFHVMDNAKL 540

Query: 541 IRALKDLIKLHEPSIVLIFGTKISGADVDKVVQELPFCYSYYRKPDGYNGGVWLLLSNQD 585
           +RALKDLI+LHEPSIVLIFG KISG D DKV++EL FC SY  KPDGYNGGVWLLLS QD
Sbjct: 541 MRALKDLIQLHEPSIVLIFGNKISGVDTDKVMRELAFCGSYSSKPDGYNGGVWLLLSKQD 600

[Close]
BLAST of CmaCh04G012490 vs. TrEMBL
Match: A0A0A0KNJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175780 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.7e-104
Identity = 254/621 (40.90%), Postives = 336/621 (54.11%), Query Frame = 1 

Query: 24  KAIVCELSASQTARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGY 83
           ++ VC+ SASQT  I ++F HS IAW+ GK++RP ++A  L RHL LT    VFELGLGY
Sbjct: 39  RSTVCKFSASQTDLIAREFAHSLIAWVVGKEIRPLKLARHLYRHLRLTKLPDVFELGLGY 98

Query: 84  FVLKFCETDFLALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDD 143
           FVLKFCETDFLA++D PW +PNLCI+  PWTP+FKPSE + S++D W+RL EL IEYY +
Sbjct: 99  FVLKFCETDFLAIEDNPWPIPNLCIYAFPWTPNFKPSEAMDSAIDCWIRLKELPIEYYKE 158

Query: 144 EVLQKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGF 203
           ++L+ I   +G  LVKIDP+TK+R KCK+ARICVR+N+ +PLPS IR+GKI QEIEYEGF
Sbjct: 159 DILRDIGKTVGEGLVKIDPITKDRKKCKYARICVRINVYEPLPSSIRIGKILQEIEYEGF 218

Query: 204 ELLCPNCSRVDGLRHNCLNLKIPSGFSGFNPHRDKPHHHGARSFKQPLIPSESSAPSPRG 263
           +LLCP C  V  L+H+CLN    S  S F  H    H     + KQPL+ SESS     G
Sbjct: 219 DLLCPRCECVVHLKHDCLNSSGSS--SSFESH----HPRDGSNSKQPLVSSESSV--AWG 278

Query: 264 SRFQV---------LDLNSNEWPSLGESGKAGTSIRTSSSPVHVK---DKAIAKKKEKCG 323
           SR++V          +L +   PS+G S KA T I +SS    +     + + K+KEKCG
Sbjct: 279 SRYEVPGTESKSSLQNLKALSTPSMGGSEKAATRISSSSLLPQLSGLLTEPLEKQKEKCG 338

Query: 324 DSVQPLPKESSRVTIKDQLKAAKTSNNPTVNEQPPSPTPCI--------LPLQPCPASEA 383
            S +  P     +  +D  +A   S+N   +       P +        + L P PA   
Sbjct: 339 GSFETFP----NLPKEDLPRALSISSNLEESSSSTISVPVLEHKNLNLSMVLAPLPAEN- 398

Query: 384 VLEFHSAAIQRSTRTKEITSVPSKE-----ISVDSR---PTVYTIDPKITSLDIALS--- 443
              F  A  + ST+ +   + P         SV ++   P+  TI P   S  IA S   
Sbjct: 399 --PFTPAETRCSTKLEVYNNQPQPSSSPLAASVSTQPPSPSSKTI-PTFCSSGIARSILK 458

Query: 444 ---------------------------------ETRTTSMPNQIQYAIEFVPTMRDGNKG 503
                                                 S P Q Q++I FV T R G K 
Sbjct: 459 KNITSTSSQGFGINRRPIFYTIPESIKSFEVGLSENPDSAPKQNQFSISFVSTPRSGTKV 518

Query: 504 GVDLGSESCGKKILCWKFHWTDNEKLIRALKDLIKLHEPSIVLIFGTKISGADVDKVVQE 563
              L S    KK+L W F   DN  LI  L  +++ +EPSIV+IFGT+I+   V++VV +
Sbjct: 519 ISALDS----KKMLGWNFRGMDNVNLIEGLNYMVQKYEPSIVVIFGTRITDNVVEEVVDK 578

Query: 564 LPFCYSYYRKPDGYNGGVWLLLSNQDVET---KVNSCSPQQVCASIYFDSKTTVAAFNPS 577
           L F  SY +K D Y+GGVWL +  +DV+T   +VNS S +QV AS YF  +        S
Sbjct: 579 LAFPGSYIKKFDNYHGGVWLFMFREDVQTEVFEVNSYSTKQVSASTYFQLEIDEPMARHS 638

[Close]
BLAST of CmaCh04G012490 vs. TrEMBL
Match: A0A0A0KRY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175800 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.0e-56
Identity = 116/248 (46.77%), Postives = 154/248 (62.10%), Query Frame = 1 

Query: 19  ARNRKKAIVCELSASQTARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFE 78
           ++     I   L+ SQTAR   +F HS IA + GK++    +   LRRHL LTG + V  
Sbjct: 39  SKTHHPTINLNLTPSQTARNNDEFRHSLIARVIGKNIHHENLTFRLRRHLPLTGDLNVVP 98

Query: 79  LGLGYFVLKFCETD--FLALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHEL 138
           LGLG+F L F      + AL++ PW +P+LCIH SPW P+FKPS+  +S VDVW+RL EL
Sbjct: 99  LGLGFFALNFSNPFDYYEALKERPWLIPHLCIHASPWIPNFKPSKAFISFVDVWIRLPEL 158

Query: 139 SIEYYDDEVLQKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQ 198
            +E+Y+ E+ + IA AIG DLVKIDPVT+ + KC FARIC+ + L +PL   I +   RQ
Sbjct: 159 GMEHYNREMFENIAKAIGVDLVKIDPVTERKQKCMFARICITITLSNPLIHYIHIEGSRQ 218

Query: 199 EIEYEGFELLCPNCSRVDGLRHNCLNLKIPSGFSGFNPHRDKPHHHGARSFKQPLIPSES 258
            I YEG + LC  C  VD L+H+CLN  IPS  SG++PH+  P    A     P + S S
Sbjct: 219 NIVYEGLDSLCSVCGCVDSLKHDCLNQNIPSASSGYDPHQQNPCPLQA---FDPSVSSSS 278

Query: 259 SAPSPRGS 265
           S+ S  GS
Sbjct: 279 SSGSSSGS 283

[Close]
BLAST of CmaCh04G012490 vs. TrEMBL
Match: A5AT31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006250 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 76/177 (42.94%), Postives = 115/177 (64.97%), Query Frame = 1 

Query: 29  ELSASQTARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGYFVLKF 88
           +LS+++   ++  + +S IA + G+ V      + L R   L GTV + +LG G+F+LKF
Sbjct: 87  KLSSTEKENLSAPWKYSLIAKVLGRKVGLQYCQAHLHRLWSLEGTVDIIDLGYGFFLLKF 146

Query: 89  C-ETDFLAL-QDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDDEVL 148
              TD++ + + VPW +    I + PW P+FKPSE  ++   VWVRL EL IEYYD EVL
Sbjct: 147 SLPTDYIKVFKGVPWLIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVL 206

Query: 149 QKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGF 204
            +I AAIG   +KIDP+T+ + + +FAR+CV V+L   L   I+LG+++Q+IEYEG+
Sbjct: 207 LQIGAAIGRT-IKIDPITEKQARGRFARMCVEVDLKHSLLPQIKLGELQQKIEYEGY 262

[Close]
BLAST of CmaCh04G012490 vs. TrEMBL
Match: F6HHZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0158g00420 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29
Identity = 94/290 (32.41%), Postives = 147/290 (50.69%), Query Frame = 1 

Query: 322 SRVTIKDQLKAAKTSNNPTVNEQPPSPTPCILPLQPCPASEAVLEFHSAAIQRSTRTKEI 381
           S + +K+    A TS +  +N+  P+    I  L P P  +A ++FHS  +QRST+ ++I
Sbjct: 148 SNLVMKNASCTAPTSLS--LNQPQPTKQSAIPQLSPMP--DATIQFHSEVMQRSTKQRKI 207

Query: 382 TSVPS-----KEISVDSRPTVYTIDPKITSLDIALS-ETRTTSMPNQIQYAIEFVPTMRD 441
            S+P      +E+S +S PTV++ID  I+ ++I++S     T   N   ++I F P+  +
Sbjct: 208 KSIPGLVQLFQELSTESSPTVFSIDSAISDIEISVSISPLPTGKAN--HHSISFSPSKTN 267

Query: 442 GNKGGVDLGS------------ESCGKKILCWKFHWTDNEKLIRALKDLIKLHEPSIVLI 501
            N   +  G             E   KK+LCW        K +RA+KDLIKLHEPSIV++
Sbjct: 268 HNMHPLPKGQAGTYQNVSKAIPEPHPKKLLCWNCRGAGELKFMRAIKDLIKLHEPSIVVL 327

Query: 502 FGTKISGADVDKVVQELPFCYSYYRKPDGYNGGVWLLLSNQDVETKVNSCSPQQVCASIY 561
              KISG D D+V++E+ F   Y+  P+G+  G+W+L   +DV  +V S +P Q+  S+ 
Sbjct: 328 LEPKISGGDADQVIKEIGFSGQYHIDPEGFAHGIWILWQTEDVRAEVTSSTPHQIHLSVQ 387

Query: 562 FDSKTTVAAFNPSGVDTKTSSG--------------PWGSPFFHTPTNWM 580
             S+         G DT   +G               W S FF+T  + M
Sbjct: 388 VLSEAFDGMLCGVGADTDALNGIPYEVDDNLEPFTQHWDSSFFYTSESLM 431

[Close]
BLAST of CmaCh04G012490 vs. TAIR10
Match: AT2G01050.1 (AT2G01050.1 zinc ion binding;nucleic acid binding)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-18
Identity = 50/152 (32.89%), Postives = 78/152 (51.32%), Query Frame = 1 

Query: 71  TGTVKVFELGLGYFVLKF-CETDFLA-LQDVPWSVPNLCIHVSPWTPDFKPSETILSSVD 130
           +G + V +L   +F+++F  E +++A L   PW V    + V  W+  F P    + +  
Sbjct: 106 SGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTP 165

Query: 131 VWVRLHELSIEYYDDEVLQKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSM 190
           VWVRL  +   YY   +L +IA  +G  L K+D  T N  K +FAR+C+ VNL  PL   
Sbjct: 166 VWVRLSNIPYNYYHRCLLMEIARGLGRPL-KVDMNTINFDKGRFARVCIEVNLAKPLKGT 225

Query: 191 IRLGKIRQEIEYEGFELLCPNCSRVDGLRHNC 221
           + +   R  + YEG   +C +C     L H+C
Sbjct: 226 VLINGDRYFVAYEGLSKICSSCGIYGHLVHSC 256

[Close]
BLAST of CmaCh04G012490 vs. NCBI nr
Match: gi|778700726|ref|XP_011654905.1| (PREDICTED: uncharacterized protein LOC105435457 isoform X1 [Cucumis sativus])

HSP 1 Score: 686.8 bits (1771), Expect = 3.3e-194
Identity = 388/649 (59.78%), Postives = 444/649 (68.41%), Query Frame = 1 

Query: 1   MALQSDYQLTGAGDDEAAARN---RKKAIV-----------------------CELSASQ 60
           MA QS +  TGAGDDEAAARN   RKK  V                       C L+ S+
Sbjct: 1   MAFQSGHPPTGAGDDEAAARNYLSRKKPKVPPPIPPSSDFHSRRSTTIATVCNCNLTPSE 60

Query: 61  TARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGYFVLKFCETDFL 120
           T RITQQF HS IA + GKD RP ++A+ LR HL LT  VKVF+LGLGYFVLKF ETD+L
Sbjct: 61  TTRITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQLGLGYFVLKFSETDYL 120

Query: 121 ALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDDEVLQKIAAAIG 180
           AL+D+PWS+PNLCIH  PWTPDFKPSE I SSV+VW+RL ELSIEYYD  +L++IA AIG
Sbjct: 121 ALEDLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPELSIEYYDVGILKRIADAIG 180

Query: 181 GDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGFELLCPNCSRVD 240
             LVKIDPVT++R KCKFAR C+ VNLCDPLPSMI LG++RQ IEYEGFE LC  C+RV 
Sbjct: 181 DPLVKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQRIEYEGFE-LCAKCNRVG 240

Query: 241 GLRHNCLNLKIPSGFSGFNPHRDKPHHHGARSF---------KQPLIPSESSAPSPRGSR 300
            LRH+C +L  PSG  GFNPH D+PHH   R F         KQPLIP  S   +   SR
Sbjct: 241 DLRHDCSSLNNPSGSYGFNPHGDEPHHSVTRDFKEIGSTSNSKQPLIPESSPVSAWESSR 300

Query: 301 F----QVLDLNSNEWPSL--GESGKAGTSIRTSSSPVHVKDKAIAKKKEKCGDSVQ---P 360
           F      LDL   +WP+L   ESGKAG+ +R SS  VHVKDK I KKKEKC  SVQ    
Sbjct: 301 FIEKNPPLDLKLIDWPNLPKRESGKAGSGVRISSPRVHVKDKEIPKKKEKCEISVQRLPN 360

Query: 361 LPKESSRVTIK-------------DQLKAAKTSNNPTV---NEQPPSPTPCILPLQPCPA 420
           LPK+ S +TIK             D+LK  KT N+  +   N QPPSPT  I  LQP PA
Sbjct: 361 LPKQCSTITIKAPELKRVVPSVVEDRLKDTKTINSTMIADHNSQPPSPTASIPFLQPSPA 420

Query: 421 SEAVLEFHSAAIQRSTRTKEITSVPSKEISVDSRPTVYTIDP-KITSLDIALSETRTTSM 480
           SEA L+F S AI   TR +EI + PSK I+  S PTVYTIDP KITSL+IALSE +T   
Sbjct: 421 SEATLKFLSDAILCLTRKEEICNSPSKVINDSSFPTVYTIDPKKITSLNIALSEVQT--- 480

Query: 481 PNQIQYAIEFVPTMRDGNKGG----VDLGSESCGKKILCWKFHWTDNEKLIRALKDLIKL 540
                  IE VPTM+ G++GG    V+ GSE C KKIL WKFH  DN KL+RALKDLI+L
Sbjct: 481 -------IELVPTMKGGDEGGVGSEVESGSEPCAKKILVWKFHVMDNAKLMRALKDLIQL 540

Query: 541 HEPSIVLIFGTKISGADVDKVVQELPFCYSYYRKPDGYNGGVWLLLSNQDVETKVNSCSP 585
           HEPSIVLIFG KISG D DKV++EL FC SY  KPDGYNGGVWLLLS QDV+TKVNS S 
Sbjct: 541 HEPSIVLIFGNKISGVDTDKVMRELAFCGSYSSKPDGYNGGVWLLLSKQDVQTKVNSFSS 600

[Close]
BLAST of CmaCh04G012490 vs. NCBI nr
Match: gi|700195278|gb|KGN50455.1| (hypothetical protein Csa_5G175790 [Cucumis sativus])

HSP 1 Score: 678.7 bits (1750), Expect = 9.0e-192
Identity = 388/659 (58.88%), Postives = 444/659 (67.37%), Query Frame = 1 

Query: 1   MALQSDYQLTGAGDDEAAARN---RKKAIV-----------------------CELSASQ 60
           MA QS +  TGAGDDEAAARN   RKK  V                       C L+ S+
Sbjct: 1   MAFQSGHPPTGAGDDEAAARNYLSRKKPKVPPPIPPSSDFHSRRSTTIATVCNCNLTPSE 60

Query: 61  TARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGYFVLKFCETDFL 120
           T RITQQF HS IA + GKD RP ++A+ LR HL LT  VKVF+LGLGYFVLKF ETD+L
Sbjct: 61  TTRITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQLGLGYFVLKFSETDYL 120

Query: 121 ALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDDEVLQKIAAAIG 180
           AL+D+PWS+PNLCIH  PWTPDFKPSE I SSV+VW+RL ELSIEYYD  +L++IA AIG
Sbjct: 121 ALEDLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPELSIEYYDVGILKRIADAIG 180

Query: 181 GDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGFELLCPNCSRVD 240
             LVKIDPVT++R KCKFAR C+ VNLCDPLPSMI LG++RQ IEYEGFE LC  C+RV 
Sbjct: 181 DPLVKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQRIEYEGFE-LCAKCNRVG 240

Query: 241 GLRHNCL----------NLKIPSGFSGFNPHRDKPHHHGARSF---------KQPLIPSE 300
            LRH+C           +L  PSG  GFNPH D+PHH   R F         KQPLIP  
Sbjct: 241 DLRHDCSSLNNPSLNNPSLNNPSGSYGFNPHGDEPHHSVTRDFKEIGSTSNSKQPLIPES 300

Query: 301 SSAPSPRGSRF----QVLDLNSNEWPSL--GESGKAGTSIRTSSSPVHVKDKAIAKKKEK 360
           S   +   SRF      LDL   +WP+L   ESGKAG+ +R SS  VHVKDK I KKKEK
Sbjct: 301 SPVSAWESSRFIEKNPPLDLKLIDWPNLPKRESGKAGSGVRISSPRVHVKDKEIPKKKEK 360

Query: 361 CGDSVQ---PLPKESSRVTIK-------------DQLKAAKTSNNPTV---NEQPPSPTP 420
           C  SVQ    LPK+ S +TIK             D+LK  KT N+  +   N QPPSPT 
Sbjct: 361 CEISVQRLPNLPKQCSTITIKAPELKRVVPSVVEDRLKDTKTINSTMIADHNSQPPSPTA 420

Query: 421 CILPLQPCPASEAVLEFHSAAIQRSTRTKEITSVPSKEISVDSRPTVYTIDP-KITSLDI 480
            I  LQP PASEA L+F S AI   TR +EI + PSK I+  S PTVYTIDP KITSL+I
Sbjct: 421 SIPFLQPSPASEATLKFLSDAILCLTRKEEICNSPSKVINDSSFPTVYTIDPKKITSLNI 480

Query: 481 ALSETRTTSMPNQIQYAIEFVPTMRDGNKGG----VDLGSESCGKKILCWKFHWTDNEKL 540
           ALSE +T          IE VPTM+ G++GG    V+ GSE C KKIL WKFH  DN KL
Sbjct: 481 ALSEVQT----------IELVPTMKGGDEGGVGSEVESGSEPCAKKILVWKFHVMDNAKL 540

Query: 541 IRALKDLIKLHEPSIVLIFGTKISGADVDKVVQELPFCYSYYRKPDGYNGGVWLLLSNQD 585
           +RALKDLI+LHEPSIVLIFG KISG D DKV++EL FC SY  KPDGYNGGVWLLLS QD
Sbjct: 541 MRALKDLIQLHEPSIVLIFGNKISGVDTDKVMRELAFCGSYSSKPDGYNGGVWLLLSKQD 600

[Close]
BLAST of CmaCh04G012490 vs. NCBI nr
Match: gi|700195277|gb|KGN50454.1| (hypothetical protein Csa_5G175780 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 2.4e-104
Identity = 254/621 (40.90%), Postives = 336/621 (54.11%), Query Frame = 1 

Query: 24  KAIVCELSASQTARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGY 83
           ++ VC+ SASQT  I ++F HS IAW+ GK++RP ++A  L RHL LT    VFELGLGY
Sbjct: 39  RSTVCKFSASQTDLIAREFAHSLIAWVVGKEIRPLKLARHLYRHLRLTKLPDVFELGLGY 98

Query: 84  FVLKFCETDFLALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDD 143
           FVLKFCETDFLA++D PW +PNLCI+  PWTP+FKPSE + S++D W+RL EL IEYY +
Sbjct: 99  FVLKFCETDFLAIEDNPWPIPNLCIYAFPWTPNFKPSEAMDSAIDCWIRLKELPIEYYKE 158

Query: 144 EVLQKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGF 203
           ++L+ I   +G  LVKIDP+TK+R KCK+ARICVR+N+ +PLPS IR+GKI QEIEYEGF
Sbjct: 159 DILRDIGKTVGEGLVKIDPITKDRKKCKYARICVRINVYEPLPSSIRIGKILQEIEYEGF 218

Query: 204 ELLCPNCSRVDGLRHNCLNLKIPSGFSGFNPHRDKPHHHGARSFKQPLIPSESSAPSPRG 263
           +LLCP C  V  L+H+CLN    S  S F  H    H     + KQPL+ SESS     G
Sbjct: 219 DLLCPRCECVVHLKHDCLNSSGSS--SSFESH----HPRDGSNSKQPLVSSESSV--AWG 278

Query: 264 SRFQV---------LDLNSNEWPSLGESGKAGTSIRTSSSPVHVK---DKAIAKKKEKCG 323
           SR++V          +L +   PS+G S KA T I +SS    +     + + K+KEKCG
Sbjct: 279 SRYEVPGTESKSSLQNLKALSTPSMGGSEKAATRISSSSLLPQLSGLLTEPLEKQKEKCG 338

Query: 324 DSVQPLPKESSRVTIKDQLKAAKTSNNPTVNEQPPSPTPCI--------LPLQPCPASEA 383
            S +  P     +  +D  +A   S+N   +       P +        + L P PA   
Sbjct: 339 GSFETFP----NLPKEDLPRALSISSNLEESSSSTISVPVLEHKNLNLSMVLAPLPAEN- 398

Query: 384 VLEFHSAAIQRSTRTKEITSVPSKE-----ISVDSR---PTVYTIDPKITSLDIALS--- 443
              F  A  + ST+ +   + P         SV ++   P+  TI P   S  IA S   
Sbjct: 399 --PFTPAETRCSTKLEVYNNQPQPSSSPLAASVSTQPPSPSSKTI-PTFCSSGIARSILK 458

Query: 444 ---------------------------------ETRTTSMPNQIQYAIEFVPTMRDGNKG 503
                                                 S P Q Q++I FV T R G K 
Sbjct: 459 KNITSTSSQGFGINRRPIFYTIPESIKSFEVGLSENPDSAPKQNQFSISFVSTPRSGTKV 518

Query: 504 GVDLGSESCGKKILCWKFHWTDNEKLIRALKDLIKLHEPSIVLIFGTKISGADVDKVVQE 563
              L S    KK+L W F   DN  LI  L  +++ +EPSIV+IFGT+I+   V++VV +
Sbjct: 519 ISALDS----KKMLGWNFRGMDNVNLIEGLNYMVQKYEPSIVVIFGTRITDNVVEEVVDK 578

Query: 564 LPFCYSYYRKPDGYNGGVWLLLSNQDVET---KVNSCSPQQVCASIYFDSKTTVAAFNPS 577
           L F  SY +K D Y+GGVWL +  +DV+T   +VNS S +QV AS YF  +        S
Sbjct: 579 LAFPGSYIKKFDNYHGGVWLFMFREDVQTEVFEVNSYSTKQVSASTYFQLEIDEPMARHS 638

[Close]
BLAST of CmaCh04G012490 vs. NCBI nr
Match: gi|700195279|gb|KGN50456.1| (hypothetical protein Csa_5G175800 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 7.2e-56
Identity = 116/248 (46.77%), Postives = 154/248 (62.10%), Query Frame = 1 

Query: 19  ARNRKKAIVCELSASQTARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFE 78
           ++     I   L+ SQTAR   +F HS IA + GK++    +   LRRHL LTG + V  
Sbjct: 39  SKTHHPTINLNLTPSQTARNNDEFRHSLIARVIGKNIHHENLTFRLRRHLPLTGDLNVVP 98

Query: 79  LGLGYFVLKFCETD--FLALQDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHEL 138
           LGLG+F L F      + AL++ PW +P+LCIH SPW P+FKPS+  +S VDVW+RL EL
Sbjct: 99  LGLGFFALNFSNPFDYYEALKERPWLIPHLCIHASPWIPNFKPSKAFISFVDVWIRLPEL 158

Query: 139 SIEYYDDEVLQKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQ 198
            +E+Y+ E+ + IA AIG DLVKIDPVT+ + KC FARIC+ + L +PL   I +   RQ
Sbjct: 159 GMEHYNREMFENIAKAIGVDLVKIDPVTERKQKCMFARICITITLSNPLIHYIHIEGSRQ 218

Query: 199 EIEYEGFELLCPNCSRVDGLRHNCLNLKIPSGFSGFNPHRDKPHHHGARSFKQPLIPSES 258
            I YEG + LC  C  VD L+H+CLN  IPS  SG++PH+  P    A     P + S S
Sbjct: 219 NIVYEGLDSLCSVCGCVDSLKHDCLNQNIPSASSGYDPHQQNPCPLQA---FDPSVSSSS 278

Query: 259 SAPSPRGS 265
           S+ S  GS
Sbjct: 279 SSGSSSGS 283

[Close]
BLAST of CmaCh04G012490 vs. NCBI nr
Match: gi|147805812|emb|CAN60544.1| (hypothetical protein VITISV_006250 [Vitis vinifera])

HSP 1 Score: 148.7 bits (374), Expect = 3.2e-32
Identity = 76/177 (42.94%), Postives = 115/177 (64.97%), Query Frame = 1 

Query: 29  ELSASQTARITQQFDHSFIAWIFGKDVRPWRIASLLRRHLCLTGTVKVFELGLGYFVLKF 88
           +LS+++   ++  + +S IA + G+ V      + L R   L GTV + +LG G+F+LKF
Sbjct: 87  KLSSTEKENLSAPWKYSLIAKVLGRKVGLQYCQAHLHRLWSLEGTVDIIDLGYGFFLLKF 146

Query: 89  C-ETDFLAL-QDVPWSVPNLCIHVSPWTPDFKPSETILSSVDVWVRLHELSIEYYDDEVL 148
              TD++ + + VPW +    I + PW P+FKPSE  ++   VWVRL EL IEYYD EVL
Sbjct: 147 SLPTDYIKVFKGVPWLIHGYYISLRPWVPNFKPSEATITHAKVWVRLPELPIEYYDKEVL 206

Query: 149 QKIAAAIGGDLVKIDPVTKNRLKCKFARICVRVNLCDPLPSMIRLGKIRQEIEYEGF 204
            +I AAIG   +KIDP+T+ + + +FAR+CV V+L   L   I+LG+++Q+IEYEG+
Sbjct: 207 LQIGAAIGRT-IKIDPITEKQARGRFARMCVEVDLKHSLLPQIKLGELQQKIEYEGY 262

The following BLAST results are available for this feature:
BLAST of CmaCh04G012490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G012490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLB0_CUCSA6.3e-19258.88Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175790 PE=4 SV=1[more]
A0A0A0KNJ5_CUCSA1.7e-10440.90Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175780 PE=4 SV=1[more]
A0A0A0KRY0_CUCSA5.0e-5646.77Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175800 PE=4 SV=1[more]
A5AT31_VITVI2.3e-3242.94Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006250 PE=4 SV=1[more]
F6HHZ1_VITVI1.8e-2932.41Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0158g00420 PE=4 SV=... [more]
BLAST of CmaCh04G012490 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01050.12.8e-1832.89 zinc ion binding;nucleic acid binding[more]
BLAST of CmaCh04G012490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778700726|ref|XP_011654905.1|3.3e-19459.78PREDICTED: uncharacterized protein LOC105435457 isoform X1 [Cucumis sativus][more]
gi|700195278|gb|KGN50455.1|9.0e-19258.88hypothetical protein Csa_5G175790 [Cucumis sativus][more]
gi|700195277|gb|KGN50454.1|2.4e-10440.90hypothetical protein Csa_5G175780 [Cucumis sativus][more]
gi|700195279|gb|KGN50456.1|7.2e-5646.77hypothetical protein Csa_5G175800 [Cucumis sativus][more]
gi|147805812|emb|CAN60544.1|3.2e-3242.94hypothetical protein VITISV_006250 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025558DUF4283
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G012490.1CmaCh04G012490.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 39..177
score: 1.3
NoneNo IPR availablePANTHERPTHR31286FAMILY NOT NAMEDcoord: 29..220
score: 4.0
NoneNo IPR availablePANTHERPTHR31286:SF7SUBFAMILY NOT NAMEDcoord: 29..220
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G012490Cucsa.166090Cucumber (Gy14) v1cgycmaB0472
CmaCh04G012490Cla020065Watermelon (97103) v1cmawmB723
CmaCh04G012490Csa5G175780Cucumber (Chinese Long) v2cmacuB746
CmaCh04G012490MELO3C011742Melon (DHL92) v3.5.1cmameB652
CmaCh04G012490ClCG02G013980Watermelon (Charleston Gray)cmawcgB641
CmaCh04G012490CSPI05G08700Wild cucumber (PI 183967)cmacpiB756
CmaCh04G012490CmoCh04G002850Cucurbita moschata (Rifu)cmacmoB731
CmaCh04G012490Lsi04G008010Bottle gourd (USVL1VR-Ls)cmalsiB676
CmaCh04G012490Cp4.1LG01g04350Cucurbita pepo (Zucchini)cmacpeB723
CmaCh04G012490Cp4.1LG01g10090Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G012490MELO3C034057.2Melon (DHL92) v3.6.1cmamedB739
CmaCh04G012490CsaV3_5G006160Cucumber (Chinese Long) v3cmacucB0884
CmaCh04G012490Cla97C02G039670Watermelon (97103) v2cmawmbB740
CmaCh04G012490Bhi07G000935Wax gourdcmawgoB0905
CmaCh04G012490Bhi07G000893Wax gourdcmawgoB0892
CmaCh04G012490CsGy5G006080Cucumber (Gy14) v2cgybcmaB673
CmaCh04G012490Carg02058Silver-seed gourdcarcmaB1170
CmaCh04G012490Carg25678Silver-seed gourdcarcmaB1180
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G012490CmaCh04G002770Cucurbita maxima (Rimu)cmacmaB531
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G012490Cucurbita maxima (Rimu)cmacmaB538
CmaCh04G012490Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G012490Cucurbita moschata (Rifu)cmacmoB745
CmaCh04G012490Melon (DHL92) v3.5.1cmameB633
CmaCh04G012490Bottle gourd (USVL1VR-Ls)cmalsiB629
CmaCh04G012490Melon (DHL92) v3.6.1cmamedB719
CmaCh04G012490Silver-seed gourdcarcmaB0666
CmaCh04G012490Cucumber (Chinese Long) v3cmacucB0853