Carg25678 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25678
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Reverse transcriptase
Location	Cucurbita_argyrosperma_scaffold_291 : 91120 .. 92877 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCAATCCAAACATTTCCACTTCAGCCGCCATACCGGCGCCGGCAACGACGGAGCGGCCGCCAGTACCATCGGCGCCACCGTCTGTAACCTCACTCCCTCTCAAACAGCTCGGATCAACCAACAGTTCGATCAGTCTCTCATTGTTTGGGTCGTCGGTAAGAAGATTCATCCACGGCAGCTCGCCGTTCGCCTTCGCCGTAATCTTCATCTCGCTGGAGATTTGGACGTCTTCGAGCTAGGGCTTGGATTTTTTGTGCTCAAATTCTCCAACGCTTTAGACTACTACGAAGCCCTTGAAGAGCGTCCATGGTCGATTCCTCACCTTTGCATCTATGTATTCCCATGGATTCCCAATTTCAAGCCCTCCGAGGCCTCGATTCCTTTCGTTGATGTCTGGATTCGGCTCCCGGAGCTCAGTATCGAGTATTATGACAAGGAGGTTTTGGAGAAAATTGCGGAAACCATCGGCGGCCGTCTCGTGAAAATCGATCCAGTAACTGAAACACGAGAGAAATGTATGTATGCTCGTATCTGTATTAGGATGAATTTAGGTTATCCCCTTAATTTGAGCTTCCAATTTGGGAAAAATCCGCAAAAAATTGTGTATGAGGGTCTGGATTTGTTGTGCATTGTCTGTGGATGTGTTGATGATCTGAAACATGATTGTTTGAGCAACCGTTCTAGTTCTTCTGGCTTTGATCCCCATCACCATAGAGCTCGTCCATTGCAGGCCACTGGTTCGAGTTTGAGTTCGAATGCGAATCCATGTTCGAGTTCAAATCTGAATCAGAATCAGAATCCGAGTTCGAGTTTGAGGTCGAATCCGAATCCGAATCTGAGTTCGAGTTCAAATTCAAATTCGAATTTGAAGATGCAGTTGATTCCTTCTAAACCCGCACCAGCATCAGCTCGTGGATCTAGATTCCAAGTTCTTGAGTTGAATTTGAATGAAGAGCCAAGCCTTCCAGTTAGTGAATCTGATAAGGAAGTAAAAGAATCTCCATCGATAACCATGAAAGCTCCTTTGTTAAAACAGACCAATTTGATTCAATCTGTGCCTTTAGCTCCTTGTGTTCTTGAAGATCATCAGTTCAGGACTGAAAAAACCAGCAGCCCCACAACGCTTGCAGTTCAGAACAATGAACCACAACCACCATCATTGGCTATTAAAAGCATAGCTCCCCTGCAACCATCTTCTGCTTTAGAGGCTGGCCTCAAGTTCTATTCCACTGCAATCCAACAATCAACAATACAGAAAGCGATAAACAACACGCCATCCGAACGAATCAGTGTCGATAGTTTGCCGACTATTTACACGATTGATCCAACAATCACAAGCCTTGCAATTGAATTGTTAGAACTGTCAGCAACAACCACAAGATCAAACCAAAACGAGCATGCTATCCACATTGTGCCAACTTCAGAGGCTGTATCAATGTCTGCATCATGTTGTTCTAAGAAAATGTTGTGCTGGAATTTTCGTGCAACAGACAACGCGAAGCTAATGCGAGCATTGAAAGATCTGATTCAATTACACAAGCCATCGATTGTGCTGATCTTTGGCACCAAGATCGGTGGTACTGATGCAGATCATGTCGTTCGGGAGCTCGCTTTCGACGGTTCATATTGTAGAAAGCCTGATGGCTACAGGGGTGGAGCTTGGCTGTTGTTGTCCCAGCAAGACGTGCAAATTGAAGTCAGCTCCTACAGCCCACAGCAGGTTTCTGCATCGGTAATTCTCCCATTCTAA

mRNA sequence

ATGGCGGTTCAATCCAAACATTTCCACTTCAGCCGCCATACCGGCGCCGGCAACGACGGAGCGGCCGCCAGTACCATCGGCGCCACCGTCTGTAACCTCACTCCCTCTCAAACAGCTCGGATCAACCAACAGTTCGATCAGTCTCTCATTGTTTGGGTCGTCGGTAAGAAGATTCATCCACGGCAGCTCGCCGTTCGCCTTCGCCGTAATCTTCATCTCGCTGGAGATTTGGACGTCTTCGAGCTAGGGCTTGGATTTTTTGTGCTCAAATTCTCCAACGCTTTAGACTACTACGAAGCCCTTGAAGAGCGTCCATGGTCGATTCCTCACCTTTGCATCTATGTATTCCCATGGATTCCCAATTTCAAGCCCTCCGAGGCCTCGATTCCTTTCGTTGATGTCTGGATTCGGCTCCCGGAGCTCAGTATCGAGTATTATGACAAGGAGGTTTTGGAGAAAATTGCGGAAACCATCGGCGGCCGTCTCGTGAAAATCGATCCAGTAACTGAAACACGAGAGAAATGTATGTATGCTCGTATCTGTATTAGGATGAATTTAGGTTATCCCCTTAATTTGAGCTTCCAATTTGGGAAAAATCCGCAAAAAATTGTGTATGAGGGTCTGGATTTGTTGTGCATTGTCTGTGGATGTGTTGATGATCTGAAACATGATTGTTTGAGCAACCGTTCTAGTTCTTCTGGCTTTGATCCCCATCACCATAGAGCTCGTCCATTGCAGGCCACTGGTTCGAGTTTGAGTTCGAATGCGAATCCATGTTCGAGTTCAAATCTGAATCAGAATCAGAATCCGAGTTCGAGTTTGAGGTCGAATCCGAATCCGAATCTGAGTTCGAGTTCAAATTCAAATTCGAATTTGAAGATGCAGTTGATTCCTTCTAAACCCGCACCAGCATCAGCTCGTGGATCTAGATTCCAAGTTCTTGAGTTGAATTTGAATGAAGAGCCAAGCCTTCCAGTTAGTGAATCTGATAAGGAAGTAAAAGAATCTCCATCGATAACCATGAAAGCTCCTTTGTTAAAACAGACCAATTTGATTCAATCTGTGCCTTTAGCTCCTTGTGTTCTTGAAGATCATCAGTTCAGGACTGAAAAAACCAGCAGCCCCACAACGCTTGCAGTTCAGAACAATGAACCACAACCACCATCATTGGCTATTAAAAGCATAGCTCCCCTGCAACCATCTTCTGCTTTAGAGGCTGGCCTCAAGTTCTATTCCACTGCAATCCAACAATCAACAATACAGAAAGCGATAAACAACACGCCATCCGAACGAATCAGTGTCGATAGTTTGCCGACTATTTACACGATTGATCCAACAATCACAAGCCTTGCAATTGAATTGTTAGAACTGTCAGCAACAACCACAAGATCAAACCAAAACGAGCATGCTATCCACATTGTGCCAACTTCAGAGGCTGTATCAATGTCTGCATCATGTTGTTCTAAGAAAATGTTGTGCTGGAATTTTCGTGCAACAGACAACGCGAAGCTAATGCGAGCATTGAAAGATCTGATTCAATTACACAAGCCATCGATTGTGCTGATCTTTGGCACCAAGATCGGTGGTACTGATGCAGATCATGTCGTTCGGGAGCTCGCTTTCGACGGTTCATATTGTAGAAAGCCTGATGGCTACAGGGGTGGAGCTTGGCTGTTGTTGTCCCAGCAAGACGTGCAAATTGAAGTCAGCTCCTACAGCCCACAGCAGGTTTCTGCATCGGTAATTCTCCCATTCTAA

Coding sequence (CDS)

ATGGCGGTTCAATCCAAACATTTCCACTTCAGCCGCCATACCGGCGCCGGCAACGACGGAGCGGCCGCCAGTACCATCGGCGCCACCGTCTGTAACCTCACTCCCTCTCAAACAGCTCGGATCAACCAACAGTTCGATCAGTCTCTCATTGTTTGGGTCGTCGGTAAGAAGATTCATCCACGGCAGCTCGCCGTTCGCCTTCGCCGTAATCTTCATCTCGCTGGAGATTTGGACGTCTTCGAGCTAGGGCTTGGATTTTTTGTGCTCAAATTCTCCAACGCTTTAGACTACTACGAAGCCCTTGAAGAGCGTCCATGGTCGATTCCTCACCTTTGCATCTATGTATTCCCATGGATTCCCAATTTCAAGCCCTCCGAGGCCTCGATTCCTTTCGTTGATGTCTGGATTCGGCTCCCGGAGCTCAGTATCGAGTATTATGACAAGGAGGTTTTGGAGAAAATTGCGGAAACCATCGGCGGCCGTCTCGTGAAAATCGATCCAGTAACTGAAACACGAGAGAAATGTATGTATGCTCGTATCTGTATTAGGATGAATTTAGGTTATCCCCTTAATTTGAGCTTCCAATTTGGGAAAAATCCGCAAAAAATTGTGTATGAGGGTCTGGATTTGTTGTGCATTGTCTGTGGATGTGTTGATGATCTGAAACATGATTGTTTGAGCAACCGTTCTAGTTCTTCTGGCTTTGATCCCCATCACCATAGAGCTCGTCCATTGCAGGCCACTGGTTCGAGTTTGAGTTCGAATGCGAATCCATGTTCGAGTTCAAATCTGAATCAGAATCAGAATCCGAGTTCGAGTTTGAGGTCGAATCCGAATCCGAATCTGAGTTCGAGTTCAAATTCAAATTCGAATTTGAAGATGCAGTTGATTCCTTCTAAACCCGCACCAGCATCAGCTCGTGGATCTAGATTCCAAGTTCTTGAGTTGAATTTGAATGAAGAGCCAAGCCTTCCAGTTAGTGAATCTGATAAGGAAGTAAAAGAATCTCCATCGATAACCATGAAAGCTCCTTTGTTAAAACAGACCAATTTGATTCAATCTGTGCCTTTAGCTCCTTGTGTTCTTGAAGATCATCAGTTCAGGACTGAAAAAACCAGCAGCCCCACAACGCTTGCAGTTCAGAACAATGAACCACAACCACCATCATTGGCTATTAAAAGCATAGCTCCCCTGCAACCATCTTCTGCTTTAGAGGCTGGCCTCAAGTTCTATTCCACTGCAATCCAACAATCAACAATACAGAAAGCGATAAACAACACGCCATCCGAACGAATCAGTGTCGATAGTTTGCCGACTATTTACACGATTGATCCAACAATCACAAGCCTTGCAATTGAATTGTTAGAACTGTCAGCAACAACCACAAGATCAAACCAAAACGAGCATGCTATCCACATTGTGCCAACTTCAGAGGCTGTATCAATGTCTGCATCATGTTGTTCTAAGAAAATGTTGTGCTGGAATTTTCGTGCAACAGACAACGCGAAGCTAATGCGAGCATTGAAAGATCTGATTCAATTACACAAGCCATCGATTGTGCTGATCTTTGGCACCAAGATCGGTGGTACTGATGCAGATCATGTCGTTCGGGAGCTCGCTTTCGACGGTTCATATTGTAGAAAGCCTGATGGCTACAGGGGTGGAGCTTGGCTGTTGTTGTCCCAGCAAGACGTGCAAATTGAAGTCAGCTCCTACAGCCCACAGCAGGTTTCTGCATCGGTAATTCTCCCATTCTAA

Protein sequence

MAVQSKHFHFSRHTGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHHRARPLQATGSSLSSNANPCSSSNLNQNQNPSSSLRSNPNPNLSSSSNSNSNLKMQLIPSKPAPASARGSRFQVLELNLNEEPSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAPCVLEDHQFRTEKTSSPTTLAVQNNEPQPPSLAIKSIAPLQPSSALEAGLKFYSTAIQQSTIQKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAVSMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELAFDGSYCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASVILPF

Homology

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BLAST of Carg25678 vs. NCBI nr
Match: XP_022941630.1 (uncharacterized protein LOC111446932 isoform X1 [Cucurbita moschata])

HSP 1 Score: 944.5 bits (2440), Expect = 1.7e-271
Identity = 527/583 (90.39%), Postives = 528/583 (90.57%), Query Frame = 0


Query: 1   MAVQSKHFHFSRHTGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHP 60
           MAVQSKHFHFSRHTGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHP
Sbjct: 1   MAVQSKHFHFSRHTGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHP 60

Query: 61  RQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIP 120
           RQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIP
Sbjct: 61  RQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIP 120

Query: 121 NFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARI 180
           NFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVT TREKCMYARI
Sbjct: 121 NFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTVTREKCMYARI 180

Query: 181 CIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHH 240
           CIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHH
Sbjct: 181 CIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHH 240

Query: 241 RARPLQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            ARPLQAT                        XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SARPLQAT--------------GSSLSSNVNPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXNLNEEPSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAPC 360
           XXXXXXXXX       NLNEEPSLPVSESDKEVKESPSITM  PLLKQTNLIQSVPLAPC
Sbjct: 301 XXXXXXXXXRFQVLELNLNEEPSLPVSESDKEVKESPSITMN-PLLKQTNLIQSVPLAPC 360

Query: 361 VLEDHQFRTEKTSSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGLKFYSTAIQQSTI 420
           VLEDHQFRTEKTSSPTTLAVQNNEPQ                  EAGLKFYSTAIQQSTI
Sbjct: 361 VLEDHQFRTEKTSSPTTLAVQNNEPQPSSLAIKSIAPLQPSSALEAGLKFYSTAIQQSTI 420

Query: 421 QKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAV 480
           QKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAV
Sbjct: 421 QKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAV 480

Query: 481 SMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELA 540
           SMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKI G DADHVVRELA
Sbjct: 481 SMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKISGADADHVVRELA 540

Query: 541 FDGSYCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASVIL 584
           FDGSYCRKPDGY+GGAWLLLSQQDVQIEVSSYSPQQVSASVIL
Sbjct: 541 FDGSYCRKPDGYKGGAWLLLSQQDVQIEVSSYSPQQVSASVIL 568

[Close]

BLAST of Carg25678 vs. NCBI nr
Match: XP_022941632.1 (uncharacterized protein LOC111446932 isoform X2 [Cucurbita moschata])

HSP 1 Score: 944.5 bits (2440), Expect = 1.7e-271
Identity = 520/583 (89.19%), Postives = 521/583 (89.37%), Query Frame = 0


Query: 1   MAVQSKHFHFSRHTGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHP 60
           MAVQSKHFHFSRHTGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHP
Sbjct: 1   MAVQSKHFHFSRHTGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHP 60

Query: 61  RQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIP 120
           RQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIP
Sbjct: 61  RQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIP 120

Query: 121 NFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARI 180
           NFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVT TREKCMYARI
Sbjct: 121 NFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTVTREKCMYARI 180

Query: 181 CIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHH 240
           CIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHH
Sbjct: 181 CIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHH 240

Query: 241 RARPLQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            ARPLQAT                           XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SARPLQAT----------------GSSLSSNVNPCXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXNLNEEPSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAPC 360
           XXXXX           NLNEEPSLPVSESDKEVKESPSITM  PLLKQTNLIQSVPLAPC
Sbjct: 301 XXXXXARGSRFQVLELNLNEEPSLPVSESDKEVKESPSITMN-PLLKQTNLIQSVPLAPC 360

Query: 361 VLEDHQFRTEKTSSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGLKFYSTAIQQSTI 420
           VLEDHQFRTEKTSSPTTLAVQNNEPQ                  EAGLKFYSTAIQQSTI
Sbjct: 361 VLEDHQFRTEKTSSPTTLAVQNNEPQPSSLAIKSIAPLQPSSALEAGLKFYSTAIQQSTI 420

Query: 421 QKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAV 480
           QKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAV
Sbjct: 421 QKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAV 480

Query: 481 SMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELA 540
           SMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKI G DADHVVRELA
Sbjct: 481 SMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKISGADADHVVRELA 540

Query: 541 FDGSYCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASVIL 584
           FDGSYCRKPDGY+GGAWLLLSQQDVQIEVSSYSPQQVSASVIL
Sbjct: 541 FDGSYCRKPDGYKGGAWLLLSQQDVQIEVSSYSPQQVSASVIL 566

[Close]

BLAST of Carg25678 vs. NCBI nr
Match: XP_022988533.1 (uncharacterized protein LOC111485743 isoform X1 [Cucurbita maxima] >XP_022988542.1 uncharacterized protein LOC111485743 isoform X2 [Cucurbita maxima])

HSP 1 Score: 587.4 bits (1513), Expect = 5.3e-164
Identity = 326/387 (84.24%), Postives = 330/387 (85.27%), Query Frame = 0


Query: 1   MAVQSKHFHFSRH-TGAGNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIH 60
           MAVQSKHFH SR  TGAGNDGAAASTIGATVCNLTPS TARINQQFDQSLI WVVG KIH
Sbjct: 1   MAVQSKHFHSSRQFTGAGNDGAAASTIGATVCNLTPSLTARINQQFDQSLIAWVVGMKIH 60

Query: 61  PRQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWI 120
           PRQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSI HLCIYVFPWI
Sbjct: 61  PRQLAVRLRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSISHLCIYVFPWI 120

Query: 121 PNFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYAR 180
           PNFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIA+TIGGRLVKIDPVTETREKCMYAR
Sbjct: 121 PNFKPSEASIPFVDVWIRLPELSIEYYDKEVLEKIAKTIGGRLVKIDPVTETREKCMYAR 180

Query: 181 ICIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHH 240
           ICIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSN S SSGFDPHH
Sbjct: 181 ICIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSNPSCSSGFDPHH 240

Query: 241 HRARPLQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           HRARPLQA                           XXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 241 HRARPLQA------------------IGSSSNSNPXXXXXXXXXXXXXXXXXXXXXXIPS 300

Query: 301 XXXXXXXXXXXXXXXXXNLNEEPSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAP 360
                            NLNEEPSLPVSESDK VKESPSITMKAPLLKQTNLI+SVPLAP
Sbjct: 301 KPAPASACGSRFQVLELNLNEEPSLPVSESDKAVKESPSITMKAPLLKQTNLIRSVPLAP 360

Query: 361 CVLEDHQFRTEKTSSPTTLAVQNNEPQ 387
           CVLEDHQFRTEKTSSPTTLAV++NEPQ
Sbjct: 361 CVLEDHQFRTEKTSSPTTLAVEDNEPQ 369

[Close]

BLAST of Carg25678 vs. NCBI nr
Match: KGN50456.1 (hypothetical protein Csa_5G175800 [Cucumis sativus])

HSP 1 Score: 421.0 bits (1081), Expect = 6.6e-114
Identity = 282/580 (48.62%), Postives = 336/580 (57.93%), Query Frame = 0


Query: 32  NLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDVFELGLGFFVLKF 91
           NLTPSQTAR N +F  SLI  V+GK IH   L  RLRR+L L GDL+V  LGLGFF L F
Sbjct: 49  NLTPSQTARNNDEFRHSLIARVIGKNIHHENLTFRLRRHLPLTGDLNVVPLGLGFFALNF 108

Query: 92  SNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLPELSIEYYDKEVL 151
           SN  DYYEAL+ERPW IPHLCI+  PWIPNFKPS+A I FVDVWIRLPEL +E+Y++E+ 
Sbjct: 109 SNPFDYYEALKERPWLIPHLCIHASPWIPNFKPSKAFISFVDVWIRLPELGMEHYNREMF 168

Query: 152 EKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQFGKNPQKIVYEGLDLL 211
           E IA+ IG  LVKIDPVTE ++KCM+ARICI + L  PL        + Q IVYEGLD L
Sbjct: 169 ENIAKAIGVDLVKIDPVTERKQKCMFARICITITLSNPLIHYIHIEGSRQNIVYEGLDSL 228

Query: 212 CIVCGCVDDLKHDCLSNR--SSSSGFDPHHHRARPLQATXXXXXXXXXXXXXXXXXXXXX 271
           C VCGCVD LKHDCL+    S+SSG+DPH     PLQA     XXXXXXXXXXXXXXXXX
Sbjct: 229 CSVCGCVDSLKHDCLNQNIPSASSGYDPHQQNPCPLQAFDPSVXXXXXXXXXXXXXXXXX 288

Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLNEE-------- 331
           XXXXXXX                                         ++          
Sbjct: 289 XXXXXXXDSLCSVCGCVYDLKHDCLNKNNPSGSSGHELHQQNPCPWQAIDSRYSSGLGLD 348

Query: 332 ---------PSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAPCVLEDHQFRTEKT 391
                    PSL  S   K  ++ P   +      +  + + V      L +    + K 
Sbjct: 349 SKKPLIHSLPSLESSSRSKSQEKDPFPELNLKNYAKLKMGEVVENEKKTLPNLPRESAKA 408

Query: 392 SSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGLKFYSTAIQQSTIQKAINNTPSERI 451
           S PT LA+ NN  +                  EAGL  +STA+Q+ T  K + NTP   +
Sbjct: 409 SCPTKLALHNNGSR-------------SPSAVEAGLTLFSTAMQRLTTVKEMINTPFGEV 468

Query: 452 S-VDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIV----------PTSEAVS 511
             VDS PT+YTI+PT  SL IE  E+  T T SNQ ++AI  V            S+A S
Sbjct: 469 DVVDSWPTVYTINPTTMSLGIEFSEV-PTMTGSNQTQYAISFVLNSGRENDNEVDSKAAS 528

Query: 512 MSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELAF 571
                CSK MLC NF   D    +RALKDLI LHKPSIVLIFG+KI  +DAD VVRE AF
Sbjct: 529 SVPPWCSKTMLCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAF 588

Query: 572 DGSYCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASV 582
           +G YCRKPDG  GG WL+LS++DVQIE ++ SPQ+V ASV
Sbjct: 589 NGFYCRKPDGNNGGVWLMLSRKDVQIEGNADSPQKVFASV 614

[Close]

BLAST of Carg25678 vs. NCBI nr
Match: XP_011654905.1 (PREDICTED: uncharacterized protein LOC105435457 isoform X1 [Cucumis sativus] >XP_011654906.1 PREDICTED: uncharacterized protein LOC105435457 isoform X2 [Cucumis sativus])

HSP 1 Score: 391.7 bits (1005), Expect = 4.3e-105
Identity = 256/578 (44.29%), Postives = 312/578 (53.98%), Query Frame = 0


Query: 24  STIGATV--CNLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDVFE 83
           ST  ATV  CNLTPS+T RI QQF  SLI  VVGK   P QLA RLR +L L  D+ VF+
Sbjct: 45  STTIATVCNCNLTPSETTRITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQ 104

Query: 84  LGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLPEL 143
           LGLG+FVLKFS     Y ALE+ PWSIP+LCI+ FPW P+FKPSEA    V+VWIRLPEL
Sbjct: 105 LGLGYFVLKFSET--DYLALEDLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPEL 164

Query: 144 SIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQFGKNPQ 203
           SIEYYD  +L++IA+ IG  LVKIDPVT  R KC +AR CI +NL  PL    + G+  Q
Sbjct: 165 SIEYYDVGILKRIADAIGDPLVKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQ 224

Query: 204 KIVYEGLDLLCIVCGCVDDLKHDC--LSNRSSSSGFDPH----HHRARP--LQATXXXXX 263
           +I YEG + LC  C  V DL+HDC  L+N S S GF+PH    HH       +       
Sbjct: 225 RIEYEGFE-LCAKCNRVGDLRHDCSSLNNPSGSYGFNPHGDEPHHSVTRDFKEIGSTSNS 284

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 323
                                                                       
Sbjct: 285 KQPLIPESSPVSAWESSRFIEKNPPLDLKLIDWPNLPKRESGKAGSGVRISSPRVHVKDK 344

Query: 324 XXXNLNEEPSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAPCVLEDHQFRTEKTS 383
                 E+  + V       K+  +IT+KAP LK+        + P V+ED + +  KT 
Sbjct: 345 EIPKKKEKCEISVQRLPNLPKQCSTITIKAPELKR--------VVPSVVED-RLKDTKTI 404

Query: 384 SPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGLKFYSTAIQQSTIQKAINNTPSERIS 443
           + T +A  N++P                   EA LKF S AI   T ++ I N+PS+ I+
Sbjct: 405 NSTMIADHNSQP---PSPTASIPFLQPSPASEATLKFLSDAILCLTRKEEICNSPSKVIN 464

Query: 444 VDSLPTIYTIDP-TITSLAIELLELSATTTRSNQNEHAIHIVPTSEA---------VSMS 503
             S PT+YTIDP  ITSL I L E+             I +VPT +          V   
Sbjct: 465 DSSFPTVYTIDPKKITSLNIALSEV-----------QTIELVPTMKGGDEGGVGSEVESG 524

Query: 504 ASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELAFDG 563
           +  C+KK+L W F   DNAKLMRALKDLIQLH+PSIVLIFG KI G D D V+RELAF G
Sbjct: 525 SEPCAKKILVWKFHVMDNAKLMRALKDLIQLHEPSIVLIFGNKISGVDTDKVMRELAFCG 584

Query: 564 SYCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASV 582
           SY  KPDGY GG WLLLS+QDVQ +V+S+S QQVSASV
Sbjct: 585 SYSSKPDGYNGGVWLLLSKQDVQTKVNSFSSQQVSASV 596

[Close]

BLAST of Carg25678 vs. TAIR10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding)

HSP 1 Score: 100.1 bits (248), Expect = 4.7e-21
Identity = 65/212 (30.66%), Postives = 97/212 (45.75%), Query Frame = 0


Query: 17  GNDGAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGD 76
           G D     TIG  V          +N  + + +IV V+G +I    L  +LR     +G 
Sbjct: 56  GEDEEPVITIGEEVLE-------AMNGLWKKCMIVKVLGSQIPISVLNRKLRELWKPSGV 115

Query: 77  LDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWI 136
           + V +L   FF+++F    +Y  AL   PW +    + V  W   F P    I    VW+
Sbjct: 116 MTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWV 175

Query: 137 RLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQF 196
           RL  +   YY + +L +IA  + GR +K+D  T   +K  +AR+CI +NL  PL  +   
Sbjct: 176 RLSNIPYNYYHRCLLMEIARGL-GRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLI 235

Query: 197 GKNPQKIVYEGLDLLCIVCGCVDDLKHDCLSN 229
             +   + YEGL  +C  CG    L H C  N
Sbjct: 236 NGDRYFVAYEGLSKICSSCGIYGHLVHSCPRN 259

[Close]

BLAST of Carg25678 vs. TAIR10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding)

HSP 1 Score: 61.2 bits (147), Expect = 2.4e-09
Identity = 50/211 (23.70%), Postives = 88/211 (41.71%), Query Frame = 0


Query: 20  GAAASTIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDV 79
           GA AS   + +  +   QT  + +   +    W +G ++H R L  R             
Sbjct: 30  GALASNRLSLLGRILNPQTQSVERAILELPYQWGLGTQVHGRILDDRC------------ 89

Query: 80  FELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLP 139
                  F ++F + +D    L   PW      I +  W  +F P+E  + F+DVW+ + 
Sbjct: 90  -------FQVRFRSEIDLLNGLRRAPWVFNEWFIALQRW-EDF-PTEDFLTFIDVWVHIR 149

Query: 140 ELSIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNL--SFQFG 199
            + + Y  +  +E IA T+ G +V +D   ET  +  + R+ +RM+   PL      +F 
Sbjct: 150 GIPLPYVSERTVEIIASTL-GEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFA 209

Query: 200 KNPQKIV---YEGLDLLCIVCGCVDDLKHDC 226
              + ++   YE L  +C  C  V+     C
Sbjct: 210 SRERAMIGFEYEKLQRVCTNCCRVNHQVSHC 218

[Close]

BLAST of Carg25678 vs. TrEMBL
Match: tr|A0A0A0KRY0|A0A0A0KRY0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175800 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 4.3e-114
Identity = 282/580 (48.62%), Postives = 336/580 (57.93%), Query Frame = 0


Query: 32  NLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDVFELGLGFFVLKF 91
           NLTPSQTAR N +F  SLI  V+GK IH   L  RLRR+L L GDL+V  LGLGFF L F
Sbjct: 49  NLTPSQTARNNDEFRHSLIARVIGKNIHHENLTFRLRRHLPLTGDLNVVPLGLGFFALNF 108

Query: 92  SNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLPELSIEYYDKEVL 151
           SN  DYYEAL+ERPW IPHLCI+  PWIPNFKPS+A I FVDVWIRLPEL +E+Y++E+ 
Sbjct: 109 SNPFDYYEALKERPWLIPHLCIHASPWIPNFKPSKAFISFVDVWIRLPELGMEHYNREMF 168

Query: 152 EKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQFGKNPQKIVYEGLDLL 211
           E IA+ IG  LVKIDPVTE ++KCM+ARICI + L  PL        + Q IVYEGLD L
Sbjct: 169 ENIAKAIGVDLVKIDPVTERKQKCMFARICITITLSNPLIHYIHIEGSRQNIVYEGLDSL 228

Query: 212 CIVCGCVDDLKHDCLSNR--SSSSGFDPHHHRARPLQATXXXXXXXXXXXXXXXXXXXXX 271
           C VCGCVD LKHDCL+    S+SSG+DPH     PLQA     XXXXXXXXXXXXXXXXX
Sbjct: 229 CSVCGCVDSLKHDCLNQNIPSASSGYDPHQQNPCPLQAFDPSVXXXXXXXXXXXXXXXXX 288

Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLNEE-------- 331
           XXXXXXX                                         ++          
Sbjct: 289 XXXXXXXDSLCSVCGCVYDLKHDCLNKNNPSGSSGHELHQQNPCPWQAIDSRYSSGLGLD 348

Query: 332 ---------PSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAPCVLEDHQFRTEKT 391
                    PSL  S   K  ++ P   +      +  + + V      L +    + K 
Sbjct: 349 SKKPLIHSLPSLESSSRSKSQEKDPFPELNLKNYAKLKMGEVVENEKKTLPNLPRESAKA 408

Query: 392 SSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGLKFYSTAIQQSTIQKAINNTPSERI 451
           S PT LA+ NN  +                  EAGL  +STA+Q+ T  K + NTP   +
Sbjct: 409 SCPTKLALHNNGSR-------------SPSAVEAGLTLFSTAMQRLTTVKEMINTPFGEV 468

Query: 452 S-VDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIV----------PTSEAVS 511
             VDS PT+YTI+PT  SL IE  E+  T T SNQ ++AI  V            S+A S
Sbjct: 469 DVVDSWPTVYTINPTTMSLGIEFSEV-PTMTGSNQTQYAISFVLNSGRENDNEVDSKAAS 528

Query: 512 MSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELAF 571
                CSK MLC NF   D    +RALKDLI LHKPSIVLIFG+KI  +DAD VVRE AF
Sbjct: 529 SVPPWCSKTMLCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAF 588

Query: 572 DGSYCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASV 582
           +G YCRKPDG  GG WL+LS++DVQIE ++ SPQ+V ASV
Sbjct: 589 NGFYCRKPDGNNGGVWLMLSRKDVQIEGNADSPQKVFASV 614

[Close]

BLAST of Carg25678 vs. TrEMBL
Match: tr|A0A0A0KLB0|A0A0A0KLB0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175790 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 8.0e-100
Identity = 258/588 (43.88%), Postives = 312/588 (53.06%), Query Frame = 0


Query: 24  STIGATV--CNLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDVFE 83
           ST  ATV  CNLTPS+T RI QQF  SLI  VVGK   P QLA RLR +L L  D+ VF+
Sbjct: 45  STTIATVCNCNLTPSETTRITQQFVHSLIARVVGKDTRPGQLAARLRHHLRLTQDVKVFQ 104

Query: 84  LGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLPEL 143
           LGLG+FVLKFS     Y ALE+ PWSIP+LCI+ FPW P+FKPSEA    V+VWIRLPEL
Sbjct: 105 LGLGYFVLKFSET--DYLALEDLPWSIPNLCIHAFPWTPDFKPSEAINSSVNVWIRLPEL 164

Query: 144 SIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQFGKNPQ 203
           SIEYYD  +L++IA+ IG  LVKIDPVT  R KC +AR CI +NL  PL    + G+  Q
Sbjct: 165 SIEYYDVGILKRIADAIGDPLVKIDPVTRDRWKCKFARFCISVNLCDPLPSMIELGRVRQ 224

Query: 204 KIVYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHHRARPLQATXXXXXXXXXXXXX 263
           +I YEG + LC  C  V DL+HDC S  +                  XXXXXXXX     
Sbjct: 225 RIEYEGFE-LCAKCNRVGDLRHDCSSLNNXXXXXXXXXXXXXXXXXXXXXXXXXXSVTRD 284

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLNEE 323
                                                                  +    
Sbjct: 285 FKEIGSTSNSKQPLIPESSPVSAWESSRFIEKNPPLDLKLIDWPNLPKRESGKAGSGVRI 344

Query: 324 PSLPVSESDKEV------------------KESPSITMKAPLLKQTNLIQSVPLAPCVLE 383
            S  V   DKE+                  K+  +IT+KAP LK+        + P V+E
Sbjct: 345 SSPRVHVKDKEIPKKKEKCEISVQRLPNLPKQCSTITIKAPELKR--------VVPSVVE 404

Query: 384 DHQFRTEKTSSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGLKFYSTAIQQSTIQKA 443
           D + +  KT + T +A  N++P                   EA LKF S AI   T ++ 
Sbjct: 405 D-RLKDTKTINSTMIADHNSQP---PSPTASIPFLQPSPASEATLKFLSDAILCLTRKEE 464

Query: 444 INNTPSERISVDSLPTIYTIDP-TITSLAIELLELSATTTRSNQNEHAIHIVPTSEA--- 503
           I N+PS+ I+  S PT+YTIDP  ITSL I L E+             I +VPT +    
Sbjct: 465 ICNSPSKVINDSSFPTVYTIDPKKITSLNIALSEV-----------QTIELVPTMKGGDE 524

Query: 504 ------VSMSASCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDAD 563
                 V   +  C+KK+L W F   DNAKLMRALKDLIQLH+PSIVLIFG KI G D D
Sbjct: 525 GGVGSEVESGSEPCAKKILVWKFHVMDNAKLMRALKDLIQLHEPSIVLIFGNKISGVDTD 584

Query: 564 HVVRELAFDGSYCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASV 582
            V+RELAF GSY  KPDGY GG WLLLS+QDVQ +V+S+S QQVSASV
Sbjct: 585 KVMRELAFCGSYSSKPDGYNGGVWLLLSKQDVQTKVNSFSSQQVSASV 606

[Close]

BLAST of Carg25678 vs. TrEMBL
Match: tr|A0A0A0KNJ5|A0A0A0KNJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175780 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 6.5e-94
Identity = 222/572 (38.81%), Postives = 297/572 (51.92%), Query Frame = 0


Query: 24  STIGATVCNLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDVFELG 83
           ST  +TVC  + SQT  I ++F  SLI WVVGK+I P +LA  L R+L L    DVFELG
Sbjct: 36  STTRSTVCKFSASQTDLIAREFAHSLIAWVVGKEIRPLKLARHLYRHLRLTKLPDVFELG 95

Query: 84  LGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLPELSI 143
           LG+FVLKF      + A+E+ PW IP+LCIY FPW PNFKPSEA    +D WIRL EL I
Sbjct: 96  LGYFVLKFCET--DFLAIEDNPWPIPNLCIYAFPWTPNFKPSEAMDSAIDCWIRLKELPI 155

Query: 144 EYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQFGKNPQKI 203
           EYY +++L  I +T+G  LVKIDP+T+ R+KC YARIC+R+N+  PL  S + GK  Q+I
Sbjct: 156 EYYKEDILRDIGKTVGEGLVKIDPITKDRKKCKYARICVRINVYEPLPSSIRIGKILQEI 215

Query: 204 VYEGLDLLCIVCGCVDDLKHDCLSNRSSSSGFDPHHHR-----ARPLQATXXXXXXXXXX 263
            YEG DLLC  C CV  LKHDCL++  SSS F+ HH R      +PL ++          
Sbjct: 216 EYEGFDLLCPRCECVVHLKHDCLNSSGSSSSFESHHPRDGSNSKQPLVSSESSVAWGSRY 275

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNL 323
                                                                     + 
Sbjct: 276 EVPGTESKSSLQNLKALSTPSMGGSEKAATRISSSSLLPQLSGLLTEPLEKQKEKCGGSF 335

Query: 324 NEEPSLPVSESDK------EVKESPSITMKAPLLKQTNLIQSVPLAPCVLEDHQFRTEKT 383
              P+LP  +  +       ++ES S T+  P+L+  NL  S+ LAP   E + F   +T
Sbjct: 336 ETFPNLPKEDLPRALSISSNLEESSSSTISVPVLEHKNLNLSMVLAPLPAE-NPFTPAET 395

Query: 384 SSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGL-KFYSTAIQQSTIQKAINNTPSER 443
              T L V NN+PQ                     +  F S+ I +S ++K I +T S+ 
Sbjct: 396 RCSTKLEVYNNQPQPSSSPLAASVSTQPPSPSSKTIPTFCSSGIARSILKKNITSTSSQG 455

Query: 444 ISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAVSMSASCCSKKM 503
             ++  P  YTI  +I S  + L E   +  + NQ   +    P S    +SA   SKKM
Sbjct: 456 FGINRRPIFYTIPESIKSFEVGLSENPDSAPKQNQFSISFVSTPRSGTKVISA-LDSKKM 515

Query: 504 LCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELAFDGSYCRKPDG 563
           L WNFR  DN  L+  L  ++Q ++PSIV+IFGT+I     + VV +LAF GSY +K D 
Sbjct: 516 LGWNFRGMDNVNLIEGLNYMVQKYEPSIVVIFGTRITDNVVEEVVDKLAFPGSYIKKFDN 575

Query: 564 YRGGAWLLLSQQDVQ---IEVSSYSPQQVSAS 581
           Y GG WL + ++DVQ    EV+SYS +QVSAS
Sbjct: 576 YHGGVWLFMFREDVQTEVFEVNSYSTKQVSAS 603

[Close]

BLAST of Carg25678 vs. TrEMBL
Match: tr|A0A2P4I7E1|A0A2P4I7E1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35001 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.1e-56
Identity = 175/577 (30.33%), Postives = 249/577 (43.15%), Query Frame = 0


Query: 10  FSRHTGAGNDGAAASTIGA---TVCNLTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVR 69
           FS +  A  +G     + A   +   L P++ A I  +F  S  ++V GKKI    L  R
Sbjct: 31  FSLNLSACQEGGDDHDMDANKFSTIELNPTELAPIIDRFRYSFFIYVHGKKIKYHNLYTR 90

Query: 70  LRRNLHLAGDLDVFELGLGFFVLKFSNALDYYEALEERPWSIPHLCIYVFPWIPNFKPSE 129
           L R L   G   + +LGLGFF+L  S   DY   L + P+SIP+ C+ +  W+PNFKPSE
Sbjct: 91  LARLLSPFGPYQLNDLGLGFFLLNVSERSDYSMVLSKHPFSIPNYCVTLLNWVPNFKPSE 150

Query: 130 ASIPFVDVWIRLPELSIEYYDKEVLEKIAETIGGRLVKIDPVTETREKCMYARICIRMNL 189
            ++  VD WI+LPEL IEYYD   L +IA  IG RL+KIDP TE R+ C +AR C+ ++L
Sbjct: 151 TNMKHVDAWIKLPELPIEYYD--FLSRIAVCIGIRLLKIDPNTEKRKTCKFARFCVTLDL 210

Query: 190 GYPLNLSFQFGKNPQKIVYEGLDL--LCIVCGCVDDLKHDCLSNRSSSSGFDPHHHRARP 249
             PL+   + G   Q IVYEGLDL  +C +C     L+ +C S  SSS+       +   
Sbjct: 211 NRPLHDHIKIGVKLQAIVYEGLDLDMVCSMCRRYGHLQKNC-SYHSSSNYISTSCAQVSE 270

Query: 250 LQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309
            Q+                                                         
Sbjct: 271 PQSN--------LQQNDEHKPPKVNVSVHTKSNSRLVRRQNPLPREGTSFSPMEEGTLIH 330

Query: 310 XXXXXXXXXXXXNLNEEPSLPVSESDKEVKESPSITMKAPLLKQTNLIQSVPLAPCVLED 369
                       +LN E   P+S       E PS    +P     +   ++P     + D
Sbjct: 331 PREDIPSHSMTKSLNPEEEAPISP-----LEEPSKPKGSPEFSIASSSNTLPQNSNTMVD 390

Query: 370 HQFRTEKTSSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGLKFYSTAIQQSTIQKAI 429
               T  T        Q N PQ                      + YSTAI ++ + K I
Sbjct: 391 KACHTIPTPP------QGNHPQISFSATNSPRPSPMII---PSFQLYSTAIHKAIVYKEI 450

Query: 430 NNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNEHAIHIVPTSEAVSMSA 489
           +N    ++S + LPT+Y I   + SL I              N+  +  +P    V M+ 
Sbjct: 451 SNKTITKVSTEILPTLYNIKSMVASLDI------VVAPNGMINQRKMSFLPRVSHV-MTN 510

Query: 490 SCCSKKMLCWNFRATDNAKLMRALKDLIQLHKPSIVLIFGTKIGGTDADHVVRELAFDGS 549
               +K+LCW +   DN  L++ +K L QL  PSIVL+FG +  G DA   ++E+ F  S
Sbjct: 511 YYHLQKLLCWKYNGLDNIMLIQTMKYLKQLENPSIVLLFGIRSSGDDAVQAIKEIGFSSS 570

Query: 550 YCRKPDGYRGGAWLLLSQQDVQIEVSSYSPQQVSASV 582
           Y   P     G WLL +++DV IEV  Y+   + A V
Sbjct: 571 YRIDPVLLDDGVWLLWNKEDVTIEVCRYTSNNIYAIV 575

[Close]

BLAST of Carg25678 vs. TrEMBL
Match: tr|A0A2P4I7D9|A0A2P4I7D9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35002 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 175/610 (28.69%), Postives = 257/610 (42.13%), Query Frame = 0


Query: 33  LTPSQTARINQQFDQSLIVWVVGKKIHPRQLAVRLRRNLHLAGDLDVFELGLGFFVLKFS 92
           L P++ A I  +F  SLI++V GKK     L  RL R L L G   + +LGLGFF+L  S
Sbjct: 80  LNPTELAPIIDRFRYSLIIYVHGKKTGYHNLYTRLVRVLALYGPYQLVDLGLGFFLLNIS 139

Query: 93  NALDYYEALEERPWSIPHLCIYVFPWIPNFKPSEASIPFVDVWIRLPELSIEYYDKEVLE 152
             LDY   L + P SI + C+ + PW PNF+PSE  I  VDVW+RLPEL IEYY    L 
Sbjct: 140 EFLDYNMVLHKYPLSISNYCVTLLPWKPNFRPSETVITQVDVWVRLPELPIEYY--SFLL 199

Query: 153 KIAETIGGRLVKIDPVTETREKCMYARICIRMNLGYPLNLSFQFGKNPQKIVYEGLDLLC 212
           +IA  IGG L+KIDP+TE R+ C +AR C+R++L  PL    + G+  Q++ YEGLD++C
Sbjct: 200 RIAAAIGGNLLKIDPITEGRKMCKFARFCVRVDLTRPLPGHIKIGEIWQRVEYEGLDMVC 259

Query: 213 IVCGCVDDLKHDCLSNRSSSSGFDPHHHRARPLQ--ATXXXXXXXXXXXXXXXXXXXXXX 272
            +C     LKH+CL    +S+  +    +A                              
Sbjct: 260 SLCRHFGHLKHNCLDQLLTSAAINASRGQASTSNDLVNSAGHRRLADHTSKIVMSKSADS 319

Query: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLNEEPSLPVSESD 332
                                                         + ++  +  ++ES 
Sbjct: 320 SSSDDNSPWPQVRPCKQHQRESSGSQRPHVQNQNMATETECDLEMIDQSKPKASVIAESS 379

Query: 333 KEVKESPSITMKAPLLKQTNLIQSV-------------PLAPCVLEDH------------ 392
            E+ +      K PL ++ N +  +             P  P  L+              
Sbjct: 380 TELMQ-----RKNPLPEEGNSLSPITEGTLIQPPKDKPPYIPKSLKSEKGLPSEFSMAGS 439

Query: 393 -----------------QFRTEKTSSPTTLAVQNNEPQXXXXXXXXXXXXXXXXXXEAGL 452
                            Q   +K           N+PQ                  +  +
Sbjct: 440 SNSLPQDSSQHVRHQPAQTMVKKACHTIPTQPHGNQPQ---TLSSETASPRPSPMVKPSI 499

Query: 453 KFYSTAIQQSTIQKAINNTPSERISVDSLPTIYTIDPTITSLAIELLELSATTTRSNQNE 512
           + Y T I  + ++K I NTP    S +   T+Y+I   + SL I    +S T  R   N+
Sbjct: 500 QLYYTGIHMAMVKKDIGNTPITEFSTEIRQTLYSIKSEVASLDI---GVSKTAMR---NQ 559

Query: 513 HAIHIVPT----------SEAVSMSASCCS-------KKMLCWNFRATDNAKLMRALKDL 572
           HAI  +PT          ++  +   +C          K+LCW +  TDN  L++ +K L
Sbjct: 560 HAISFLPTVGDFTKNPLQNQQEATYQTCAETVPQTPLHKLLCWKYNGTDNITLIQTMKYL 619

Query: 573 IQLHKPSIVLIFGTKIGGTDADHVVRELAFDGSYCRKPDGYRGGAWLLLSQQDVQIEVSS 582
            +   PSIVL+FG K  G DAD  + E+ F GSY   P  +  G WLL  ++DV IEV+S
Sbjct: 620 KEHENPSIVLLFGIKSSGNDADQAIEEIGFSGSYLIDPFLFDDGVWLLW-KKDVVIEVNS 672

The following BLAST results are available for this feature:

BLAST of Carg25678 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941630.1	1.7e-271	90.39	uncharacterized protein LOC111446932 isoform X1 [Cucurbita moschata]	[more]
XP_022941632.1	1.7e-271	89.19	uncharacterized protein LOC111446932 isoform X2 [Cucurbita moschata]	[more]
XP_022988533.1	5.3e-164	84.24	uncharacterized protein LOC111485743 isoform X1 [Cucurbita maxima] >XP_022988542...	[more]
KGN50456.1	6.6e-114	48.62	hypothetical protein Csa_5G175800 [Cucumis sativus]	[more]
XP_011654905.1	4.3e-105	44.29	PREDICTED: uncharacterized protein LOC105435457 isoform X1 [Cucumis sativus] >XP...	[more]

BLAST of Carg25678 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01050.1	4.7e-21	30.66	zinc ion binding;nucleic acid binding	[more]
AT5G36228.1	2.4e-09	23.70	nucleic acid binding;zinc ion binding	[more]

BLAST of Carg25678 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25678 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRY0\|A0A0A0KRY0_CUCSA	4.3e-114	48.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175800 PE=4 SV=1	[more]
tr\|A0A0A0KLB0\|A0A0A0KLB0_CUCSA	8.0e-100	43.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175790 PE=4 SV=1	[more]
tr\|A0A0A0KNJ5\|A0A0A0KNJ5_CUCSA	6.5e-94	38.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175780 PE=4 SV=1	[more]
tr\|A0A2P4I7E1\|A0A2P4I7E1_QUESU	7.1e-56	30.33	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35001 PE=4 SV=1	[more]
tr\|A0A2P4I7D9\|A0A2P4I7D9_QUESU	1.6e-55	28.69	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35002 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025558	DUF4283

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25678-RA	Carg25678-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 40..182 e-value: 4.1E-27 score: 94.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..296
None	No IPR available	PANTHER	PTHR31286:SF11	NUCLEIC ACID BINDING / ZINC ION BINDING PROTEIN-RELATED	coord: 48..324
None	No IPR available	PANTHER	PTHR31286	FAMILY NOT NAMED	coord: 48..324

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25678	Cla020065	Watermelon (97103) v1	carwmB0852
Carg25678	Csa5G175780	Cucumber (Chinese Long) v2	carcuB0867
Carg25678	MELO3C011742	Melon (DHL92) v3.5.1	carmeB0841
Carg25678	ClCG02G013980	Watermelon (Charleston Gray)	carwcgB0825
Carg25678	CSPI05G08700	Wild cucumber (PI 183967)	carcpiB0887
Carg25678	Cucsa.166090	Cucumber (Gy14) v1	carcgyB0972
Carg25678	CmaCh04G012490	Cucurbita maxima (Rimu)	carcmaB1180
Carg25678	CmaCh04G002770	Cucurbita maxima (Rimu)	carcmaB1179
Carg25678	CmoCh04G002850	Cucurbita moschata (Rifu)	carcmoB1148
Carg25678	Lsi04G008010	Bottle gourd (USVL1VR-Ls)	carlsiB774
Carg25678	Cp4.1LG01g10090	Cucurbita pepo (Zucchini)	carcpeB1187
Carg25678	Cp4.1LG01g04350	Cucurbita pepo (Zucchini)	carcpeB1186
Carg25678	CsGy5G006080	Cucumber (Gy14) v2	carcgybB0841
Carg25678	MELO3C034057.2	Melon (DHL92) v3.6.1	carmedB0852
Carg25678	CsaV3_5G006160	Cucumber (Chinese Long) v3	carcucB0892
Carg25678	Cla97C02G039670	Watermelon (97103) v2	carwmbB0888
Carg25678	Bhi07G000893	Wax gourd	carwgoB0992
Carg25678	Bhi07G000935	Wax gourd	carwgoB0993

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25678	Carg02058	Silver-seed gourd	carcarB625

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25678	Cucurbita moschata (Rifu)	carcmoB1149