CmaCh04G011450 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G011450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	17.4 kDa class I heat shock family protein
Location	Cma_Chr04 : 5882664 .. 5883107 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGCTAATTCCAAGATTTTTGGGTGGGCGTGGGAGCAACAACTCGGACCCCATGTCATTGTCATCGGATGTTTGGGATCCATTTGATCGGGAGACATCTGCTATGGCCAACGCCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGGATGAAGAAGGATGTAGTGAAAGTAGAAGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGAAGCAAAGAGAAGGAGGAGAAGAATGATAAATGGCACAGAGTCGAACGAAGCAGTGGGAAGTTCGTGAGGAGATTCAGGCTGCCGGAGAACGCTAAAGTTGAAGAGGTGAAGGCTAGCATCGAAAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

mRNA sequence

ATGGCGTCGCTAATTCCAAGATTTTTGGGTGGGCGTGGGAGCAACAACTCGGACCCCATGTCATTGTCATCGGATGTTTGGGATCCATTTGATCGGGAGACATCTGCTATGGCCAACGCCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGGATGAAGAAGGATGTAGTGAAAGTAGAAGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGAAGCAAAGAGAAGGAGGAGAAGAATGATAAATGGCACAGAGTCGAACGAAGCAGTGGGAAGTTCGTGAGGAGATTCAGGCTGCCGGAGAACGCTAAAGTTGAAGAGGTGAAGGCTAGCATCGAAAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Coding sequence (CDS)

ATGGCGTCGCTAATTCCAAGATTTTTGGGTGGGCGTGGGAGCAACAACTCGGACCCCATGTCATTGTCATCGGATGTTTGGGATCCATTTGATCGGGAGACATCTGCTATGGCCAACGCCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGGATGAAGAAGGATGTAGTGAAAGTAGAAGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGAAGCAAAGAGAAGGAGGAGAAGAATGATAAATGGCACAGAGTCGAACGAAGCAGTGGGAAGTTCGTGAGGAGATTCAGGCTGCCGGAGAACGCTAAAGTTGAAGAGGTGAAGGCTAGCATCGAAAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Protein sequence

MASLIPRFLGGRGSNNSDPMSLSSDVWDPFDRETSAMANARIDWKETPEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG

Homology

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BLAST of CmaCh04G011450 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.2e-53
Identity = 107/158 (67.72%), Postives = 127/158 (80.38%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD-------------RETSAMANARIDWKETPE 62
           S+IP F GGR SN  DP SL  DVWDPF              +ET+A  N  IDWKETP+
Sbjct: 2   SIIPSFFGGRRSNVFDPFSL--DVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQ 61

Query: 63  AHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 122
           AH+FKADLPG+KK+ VKVE+EEG+VLQISGER+KEKEEKNDKWHRVERSSGKF+RRFRLP
Sbjct: 62  AHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLP 121

Query: 123 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           ENAKV+EVKA++ NGV+TV VPK + KKPE+++I+ISG
Sbjct: 122 ENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

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BLAST of CmaCh04G011450 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-52
Identity = 107/160 (66.88%), Postives = 125/160 (78.12%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD---------------RETSAMANARIDWKET 62
           SLIP   GGR SN  DP S   D+WDPF+               R+ +A  NAR+DWKET
Sbjct: 2   SLIPSIFGGRRSNVFDPFS--QDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 61

Query: 63  PEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFR 122
           PEAH+FKADLPG+KK+ VKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKF+RRFR
Sbjct: 62  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 121

Query: 123 LPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           LPENAK+EEVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 122 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

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BLAST of CmaCh04G011450 vs. Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-52
Identity = 102/157 (64.97%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD------------RETSAMANARIDWKETPEA 62
           SL+P F GGR +N  DP SL  DVWDPF+            ++ +A  NA++DW+ETPEA
Sbjct: 2   SLVPSFFGGRRTNVFDPFSL--DVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEA 61

Query: 63  HIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 122
           H+FKAD+PG+KK+ VKVEVE+G +LQISGERS E EEK+D WHRVERSSGKF+RRFRLPE
Sbjct: 62  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 121

Query: 123 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           NAKVEEVKAS+ENGVL+V VPK +E KPE++S++ISG
Sbjct: 122 NAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

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BLAST of CmaCh04G011450 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-52
Identity = 106/159 (66.67%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD--------------RETSAMANARIDWKETP 62
           SLIP F GGR SN  DP SL  DVWDPF               RE SA  + R+DWKETP
Sbjct: 2   SLIPSFFGGRRSNVFDPFSL--DVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETP 61

Query: 63  EAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRL 122
           EAH+FKADLPGMKK+ VKVE+E+ RVLQISGERS EKE+KND+WHR+ERSSGKF+RRFRL
Sbjct: 62  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 121

Query: 123 PENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           PENAK+++VKA++ENGVLTV VPK + KKPE+++I+ISG
Sbjct: 122 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of CmaCh04G011450 vs. Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-51
Identity = 106/160 (66.25%), Postives = 124/160 (77.50%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD---------------RETSAMANARIDWKET 62
           S+IP F G R SN  +P SL  D+WDPF                +ET+A AN  IDWKET
Sbjct: 2   SIIPSFFGSRRSNVLNPFSL--DIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKET 61

Query: 63  PEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFR 122
           P+AH+FKADLPG+KK+ VKVEVEEG+VLQISGER+KEKEEKN+KWHRVE SSGKF+RRFR
Sbjct: 62  PQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFR 121

Query: 123 LPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           LPENA V+EVKA +ENGVLTV VPK + KKPE++SI ISG
Sbjct: 122 LPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159

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BLAST of CmaCh04G011450 vs. TrEMBL
Match: B9T5S1_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.8e-55
Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD------------RETSAMANARIDWKETPEA 62
           SLIP   G R +N  DP SL  D+WDPFD            RETSA+ANARIDWKETPEA
Sbjct: 2   SLIPSIFGSRRTNVFDPFSL--DLWDPFDGLFNSANLPASARETSALANARIDWKETPEA 61

Query: 63  HIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 122
           HIFKAD+PG+KK+ VKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF RRFRLPE
Sbjct: 62  HIFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFFRRFRLPE 121

Query: 123 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           NAK+EEVKAS+ENGVLTV VPK +EKKPE++S++ISG
Sbjct: 122 NAKMEEVKASMENGVLTVTVPKEEEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011450 vs. TrEMBL
Match: B9T5S2_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450650 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.1e-55
Identity = 115/157 (73.25%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD------------RETSAMANARIDWKETPEA 62
           SLIP   G R +N  DP SL  D WDPFD            RETSA+ANARIDWKETPEA
Sbjct: 2   SLIPSIFGSRRTNVVDPFSL--DRWDPFDSLFNSANLPASARETSALANARIDWKETPEA 61

Query: 63  HIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 122
           HIFKAD+PG+KK+ VKVE+EEGR+LQISGERSKE+EEKND+WHRVERSSGKF+RRFRLPE
Sbjct: 62  HIFKADVPGLKKEEVKVEIEEGRILQISGERSKEQEEKNDRWHRVERSSGKFLRRFRLPE 121

Query: 123 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           NAK+EEVKAS+ENGVLTV VPK KEKKPE++S++ISG
Sbjct: 122 NAKMEEVKASMENGVLTVTVPKEKEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011450 vs. TrEMBL
Match: V4SLT9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029467mg PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.0e-55
Identity = 115/159 (72.33%), Postives = 132/159 (83.02%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD--------------RETSAMANARIDWKETP 62
           SLIP   GGR +N  DP+SL  DVWDPFD              RETS  ANARIDWKETP
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL--DVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETP 61

Query: 63  EAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRL 122
           +AH+FKADLPG++K+ VKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRL
Sbjct: 62  QAHVFKADLPGLRKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRL 121

Query: 123 PENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           P+NAKVE+VKAS+ENGVLTV VPK +EKKPE+++IEISG
Sbjct: 122 PDNAKVEQVKASMENGVLTVTVPKQEEKKPEVKAIEISG 158

[Close]

BLAST of CmaCh04G011450 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.9e-55
Identity = 117/160 (73.12%), Postives = 129/160 (80.62%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD---------------RETSAMANARIDWKET 62
           +LIP   GGR SN  DP SL  DVWDPF+               RETSA AN RIDWKET
Sbjct: 2   ALIPTIFGGRRSNVFDPFSL--DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKET 61

Query: 63  PEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFR 122
           P+AHIFKADLPG+KK+ VKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKF+RRFR
Sbjct: 62  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFR 121

Query: 123 LPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           LPENAK EEVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 122 LPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmaCh04G011450 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-54
Identity = 115/160 (71.88%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD---------------RETSAMANARIDWKET 62
           +L+P   GGR SN  DP SL  D+WDPF+               RETSA AN RIDWKET
Sbjct: 2   ALVPSIFGGRRSNVFDPFSL--DIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKET 61

Query: 63  PEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFR 122
           P+AHIFKADLPG+KK+ VKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERS GKF+RRFR
Sbjct: 62  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFR 121

Query: 123 LPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           LPENAKVEEVKAS+ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 122 LPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmaCh04G011450 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 206.8 bits (525), Expect = 8.9e-54
Identity = 107/160 (66.88%), Postives = 125/160 (78.12%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD---------------RETSAMANARIDWKET 62
           SLIP   GGR SN  DP S   D+WDPF+               R+ +A  NAR+DWKET
Sbjct: 2   SLIPSIFGGRRSNVFDPFS--QDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 61

Query: 63  PEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFR 122
           PEAH+FKADLPG+KK+ VKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKF+RRFR
Sbjct: 62  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 121

Query: 123 LPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           LPENAK+EEVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 122 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh04G011450 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 205.7 bits (522), Expect = 2.0e-53
Identity = 102/157 (64.97%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD------------RETSAMANARIDWKETPEA 62
           SL+P F GGR +N  DP SL  DVWDPF+            ++ +A  NA++DW+ETPEA
Sbjct: 2   SLVPSFFGGRRTNVFDPFSL--DVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEA 61

Query: 63  HIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 122
           H+FKAD+PG+KK+ VKVEVE+G +LQISGERS E EEK+D WHRVERSSGKF+RRFRLPE
Sbjct: 62  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 121

Query: 123 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           NAKVEEVKAS+ENGVL+V VPK +E KPE++S++ISG
Sbjct: 122 NAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmaCh04G011450 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 202.2 bits (513), Expect = 2.2e-52
Identity = 103/158 (65.19%), Postives = 124/158 (78.48%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD-------------RETSAMANARIDWKETPE 62
           SLIP   GGR +N  DP SL  DV+DPF+              + +A  NA++DW+ETPE
Sbjct: 2   SLIPSIFGGRRTNVFDPFSL--DVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPE 61

Query: 63  AHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 122
           AH+FKADLPG++K+ VKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRLP
Sbjct: 62  AHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLP 121

Query: 123 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           ENAK+EE+KAS+ENGVL+V VPK  EKKPE++SI+ISG
Sbjct: 122 ENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh04G011450 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-48
Identity = 99/154 (64.29%), Postives = 120/154 (77.92%), Query Frame = 1


Query: 3   SLIPRFLGG-RGSNNSDPMSLSSDVWDPF--------DRETSAMANARIDWKETPEAHIF 62
           S+IP F    R SN  DP SL  DVWDPF         RE SA+ NAR+DW+ETPEAH+F
Sbjct: 2   SMIPSFFNNNRRSNIFDPFSL--DVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVF 61

Query: 63  KADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENAK 122
           KADLPG+KK+ VKVE+EE  VL+ISGER  EKE+KND WHRVERSSG+F RRFRLPEN K
Sbjct: 62  KADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVK 121

Query: 123 VEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           +++VKA++ENGVLTV VPK + KK +++SI+ISG
Sbjct: 122 MDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmaCh04G011450 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 184.1 bits (466), Expect = 6.2e-47
Identity = 100/158 (63.29%), Postives = 120/158 (75.95%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNS--DPMSLSSDVWDPFDR---------ETSAMANARIDWKETPEAH 62
           SLIP F G    +NS  DP SL  DVWDPF           ETSA+ NAR+DWKET EAH
Sbjct: 2   SLIPSFFGNNRRSNSIFDPFSL--DVWDPFKELQFPSSLSGETSAITNARVDWKETAEAH 61

Query: 63  IFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPEN 122
           +FKADLPGMKK+ VKVE+E+  VL+ISGER  EKEEK D WHRVERSSG+F R+F+LPEN
Sbjct: 62  VFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPEN 121

Query: 123 AKVEEVKASIENGVLTVRVPKTKE--KKPEIRSIEISG 148
            K+++VKAS+ENGVLTV VPK +E  KK +++SI+ISG
Sbjct: 122 VKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmaCh04G011450 vs. NCBI nr
Match: gi|255585824|ref|XP_002533590.1| (PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis])

HSP 1 Score: 223.4 bits (568), Expect = 2.6e-55
Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD------------RETSAMANARIDWKETPEA 62
           SLIP   G R +N  DP SL  D+WDPFD            RETSA+ANARIDWKETPEA
Sbjct: 2   SLIPSIFGSRRTNVFDPFSL--DLWDPFDGLFNSANLPASARETSALANARIDWKETPEA 61

Query: 63  HIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 122
           HIFKAD+PG+KK+ VKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF RRFRLPE
Sbjct: 62  HIFKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFFRRFRLPE 121

Query: 123 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           NAK+EEVKAS+ENGVLTV VPK +EKKPE++S++ISG
Sbjct: 122 NAKMEEVKASMENGVLTVTVPKEEEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011450 vs. NCBI nr
Match: gi|1000938865|ref|XP_015583500.1| (PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis])

HSP 1 Score: 222.6 bits (566), Expect = 4.4e-55
Identity = 115/157 (73.25%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD------------RETSAMANARIDWKETPEA 62
           SLIP   G R +N  DP SL  D WDPFD            RETSA+ANARIDWKETPEA
Sbjct: 2   SLIPSIFGSRRTNVVDPFSL--DRWDPFDSLFNSANLPASARETSALANARIDWKETPEA 61

Query: 63  HIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 122
           HIFKAD+PG+KK+ VKVE+EEGR+LQISGERSKE+EEKND+WHRVERSSGKF+RRFRLPE
Sbjct: 62  HIFKADVPGLKKEEVKVEIEEGRILQISGERSKEQEEKNDRWHRVERSSGKFLRRFRLPE 121

Query: 123 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           NAK+EEVKAS+ENGVLTV VPK KEKKPE++S++ISG
Sbjct: 122 NAKMEEVKASMENGVLTVTVPKEKEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011450 vs. NCBI nr
Match: gi|567864324|ref|XP_006424811.1| (hypothetical protein CICLE_v10029467mg [Citrus clementina])

HSP 1 Score: 222.2 bits (565), Expect = 5.8e-55
Identity = 115/159 (72.33%), Postives = 132/159 (83.02%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD--------------RETSAMANARIDWKETP 62
           SLIP   GGR +N  DP+SL  DVWDPFD              RETS  ANARIDWKETP
Sbjct: 2   SLIPSIFGGRRTNVFDPVSL--DVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETP 61

Query: 63  EAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRL 122
           +AH+FKADLPG++K+ VKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRL
Sbjct: 62  QAHVFKADLPGLRKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRL 121

Query: 123 PENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           P+NAKVE+VKAS+ENGVLTV VPK +EKKPE+++IEISG
Sbjct: 122 PDNAKVEQVKASMENGVLTVTVPKQEEKKPEVKAIEISG 158

[Close]

BLAST of CmaCh04G011450 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 221.5 bits (563), Expect = 9.9e-55
Identity = 117/160 (73.12%), Postives = 129/160 (80.62%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFD---------------RETSAMANARIDWKET 62
           +LIP   GGR SN  DP SL  DVWDPF+               RETSA AN RIDWKET
Sbjct: 2   ALIPTIFGGRRSNVFDPFSL--DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKET 61

Query: 63  PEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFR 122
           P+AHIFKADLPG+KK+ VKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKF+RRFR
Sbjct: 62  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFR 121

Query: 123 LPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           LPENAK EEVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 122 LPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmaCh04G011450 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 9.9e-55
Identity = 118/160 (73.75%), Postives = 129/160 (80.62%), Query Frame = 1


Query: 3   SLIPRFLGGRGSNNSDPMSLSSDVWDPFDR---------------ETSAMANARIDWKET 62
           SLIP   GGR SN  DP SL  D+WDPF+                ETSA AN RIDWKET
Sbjct: 2   SLIPSIFGGRRSNVFDPFSL--DIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKET 61

Query: 63  PEAHIFKADLPGMKKDVVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFR 122
           P+AHIFKADLPG+KK+ VKVEVEEGRVLQISGERSKE+EEKNDKWHRVERSSGKF RRFR
Sbjct: 62  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFR 121

Query: 123 LPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 148
           LPENAKVEEVKA++ENGVLTV VPK +EKKPEI+SI+ISG
Sbjct: 122 LPENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

The following BLAST results are available for this feature:

BLAST of CmaCh04G011450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP11_DAUCA	3.2e-53	67.72	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HS181_ARATH	1.6e-52	66.88	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1	[more]
HSP17_ARATH	3.5e-52	64.97	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=...	[more]
HSP12_MEDSA	3.5e-52	66.67	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP12_DAUCA	1.3e-51	66.25	18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]

BLAST of CmaCh04G011450 vs. TrEMBL


Match Name	E-value	Identity	Description
B9T5S1_RICCO	1.8e-55	73.89	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1	[more]
B9T5S2_RICCO	3.1e-55	73.25	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450650 PE=3 SV=1	[more]
V4SLT9_9ROSI	4.0e-55	72.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029467mg PE=3 SV=1	[more]
H6TB42_CITLA	6.9e-55	73.13	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KLU0_CUCSA	1.5e-54	71.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]

BLAST of CmaCh04G011450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	8.9e-54	66.88	heat shock protein 18.2	[more]
AT3G46230.1	2.0e-53	64.97	heat shock protein 17.4	[more]
AT1G53540.1	2.2e-52	65.19	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	1.1e-48	64.29	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	6.2e-47	63.29	HSP20-like chaperones superfamily protein	[more]

BLAST of CmaCh04G011450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|255585824\|ref\|XP_002533590.1\|	2.6e-55	73.89	PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis]	[more]
gi\|1000938865\|ref\|XP_015583500.1\|	4.4e-55	73.25	PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis]	[more]
gi\|567864324\|ref\|XP_006424811.1\|	5.8e-55	72.33	hypothetical protein CICLE_v10029467mg [Citrus clementina]	[more]
gi\|315932718\|gb\|ADU55789.1\|	9.9e-55	73.13	HSP18.1A [Citrullus lanatus]	[more]
gi\|659131157\|ref\|XP_008465538.1\|	9.9e-55	73.75	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G011450.1	CmaCh04G011450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 43..146 score: 1.6
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 43..132 score: 24
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 28..146 score: 3.2
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 23..147 score: 4.53
None	No IPR available	PANTHER	PTHR11527:SF152	SUBFAMILY NOT NAMED	coord: 1..147 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G011450	Cla008198	Watermelon (97103) v1	cmawmB673
CmaCh04G011450	Cla004313	Watermelon (97103) v1	cmawmB690
CmaCh04G011450	Csa5G197110	Cucumber (Chinese Long) v2	cmacuB746
CmaCh04G011450	CSPI05G10290	Wild cucumber (PI 183967)	cmacpiB756
CmaCh04G011450	CmoCh15G001240	Cucurbita moschata (Rifu)	cmacmoB695
CmaCh04G011450	Lsi04G009460	Bottle gourd (USVL1VR-Ls)	cmalsiB676
CmaCh04G011450	CsGy5G007660	Cucumber (Gy14) v2	cgybcmaB673

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G011450	Cucumber (Gy14) v2	cgybcmaB412
CmaCh04G011450	Cucumber (Gy14) v2	cgybcmaB556
CmaCh04G011450	Cucumber (Gy14) v2	cgybcmaB840
CmaCh04G011450	Melon (DHL92) v3.6.1	cmamedB741
CmaCh04G011450	Melon (DHL92) v3.6.1	cmamedB766
CmaCh04G011450	Melon (DHL92) v3.6.1	cmamedB803
CmaCh04G011450	Silver-seed gourd	carcmaB0034
CmaCh04G011450	Silver-seed gourd	carcmaB0116
CmaCh04G011450	Silver-seed gourd	carcmaB0375
CmaCh04G011450	Silver-seed gourd	carcmaB0948
CmaCh04G011450	Cucumber (Chinese Long) v3	cmacucB0884
CmaCh04G011450	Cucumber (Chinese Long) v3	cmacucB0912
CmaCh04G011450	Watermelon (97103) v2	cmawmbB719
CmaCh04G011450	Watermelon (97103) v2	cmawmbB727
CmaCh04G011450	Watermelon (97103) v2	cmawmbB754
CmaCh04G011450	Watermelon (97103) v2	cmawmbB780
CmaCh04G011450	Wax gourd	cmawgoB0864
CmaCh04G011450	Wax gourd	cmawgoB0889
CmaCh04G011450	Cucurbita maxima (Rimu)	cmacmaB272
CmaCh04G011450	Cucurbita maxima (Rimu)	cmacmaB326
CmaCh04G011450	Cucurbita maxima (Rimu)	cmacmaB516
CmaCh04G011450	Cucurbita maxima (Rimu)	cmacmaB531
CmaCh04G011450	Cucurbita maxima (Rimu)	cmacmaB533
CmaCh04G011450	Cucumber (Gy14) v1	cgycmaB0375
CmaCh04G011450	Cucumber (Gy14) v1	cgycmaB0472
CmaCh04G011450	Cucurbita moschata (Rifu)	cmacmoB726
CmaCh04G011450	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G011450	Cucurbita moschata (Rifu)	cmacmoB731
CmaCh04G011450	Cucurbita moschata (Rifu)	cmacmoB734
CmaCh04G011450	Wild cucumber (PI 183967)	cmacpiB783
CmaCh04G011450	Cucumber (Chinese Long) v2	cmacuB772
CmaCh04G011450	Melon (DHL92) v3.5.1	cmameB655
CmaCh04G011450	Melon (DHL92) v3.5.1	cmameB682
CmaCh04G011450	Melon (DHL92) v3.5.1	cmameB686
CmaCh04G011450	Watermelon (Charleston Gray)	cmawcgB624
CmaCh04G011450	Watermelon (Charleston Gray)	cmawcgB673
CmaCh04G011450	Watermelon (97103) v1	cmawmB678
CmaCh04G011450	Watermelon (97103) v1	cmawmB740
CmaCh04G011450	Cucurbita pepo (Zucchini)	cmacpeB729
CmaCh04G011450	Cucurbita pepo (Zucchini)	cmacpeB708
CmaCh04G011450	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G011450	Cucurbita pepo (Zucchini)	cmacpeB723
CmaCh04G011450	Cucurbita pepo (Zucchini)	cmacpeB757
CmaCh04G011450	Bottle gourd (USVL1VR-Ls)	cmalsiB642
CmaCh04G011450	Bottle gourd (USVL1VR-Ls)	cmalsiB659