CsGy5G007660 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G007660
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	17.8 kDa class I heat shock protein-like
Location	Chr5 : 5392814 .. 5393284 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATGGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAA

mRNA sequence

ATGTCACTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATGGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAA

Coding sequence (CDS)

ATGTCACTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATGGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAA

Protein sequence

MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH

Homology

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BLAST of CsGy5G007660 vs. NCBI nr
Match: XP_004150236.2 (PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus] >KGN50622.1 Chloroplast small heat shock protein class I [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 2.2e-80
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60
           MSLIPSFFGGRRT+VFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF
Sbjct: 1   MSLIPSFFGGRRTHVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60

Query: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120
           TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK
Sbjct: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 157
           VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH
Sbjct: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 156

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BLAST of CsGy5G007660 vs. NCBI nr
Match: XP_011654976.1 (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis sativus] >KGN50609.1 hypothetical protein Csa_5G190530 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 3.3e-73
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPSFFGGRRTNVFDPFSLD WDPFQGF FSNSL NLPS     SAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQF+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPE-IKSIEIS 158

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BLAST of CsGy5G007660 vs. NCBI nr
Match: XP_008464642.1 (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 6.5e-69
Identity = 140/159 (88.05%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSA-----FANTRIDWKETP 60
           MSLIPSFF GRR+N FDPFSLD WDPFQGF FSNSL+N PSSA     FANTRIDWKETP
Sbjct: 1   MSLIPSFFRGRRSNDFDPFSLDVWDPFQGFPFSNSLANFPSSARETSTFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVL VTVPK+EEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLMVTVPKMEEKKPE-IKSIEIS 158

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BLAST of CsGy5G007660 vs. NCBI nr
Match: XP_008463198.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 7.2e-68
Identity = 136/158 (86.08%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           M+LIPS FGGRR+NVFDPFSLD WDPF+GFSFSNSL+NLPS     SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIF ADLPGI K+EVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEI 154
           PENAKV+EVKA+MENGVLTVTVPK+EEKKPE IKSI+I
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPE-IKSIDI 157

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BLAST of CsGy5G007660 vs. NCBI nr
Match: XP_008465538.1 (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 1.6e-67
Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPS FGGRR+NVFDPFSLD WDPF+GF FSNSL+N+PS     SAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIF ADLPGI K+EVKVEV+EGRVLQISGERSKEQEEKNDKWHR+ERSSG+F RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKV+EVKA+MENGVLTVTVPKVEEKKPE IKSI+I+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPE-IKSIDIS 158

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BLAST of CsGy5G007660 vs. TAIR10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 231.5 bits (589), Expect = 3.6e-61
Identity = 112/157 (71.34%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSLIPS FGGRRTNVFDPFSLD +DPF+GF   + L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F ADLPG+ K+EVKVEV++G +LQISGERS E EEKNDKWHR+ERSSG+F RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAK++E+KASMENGVL+VTVPKV EKKPE +KSI+I+
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPE-VKSIDIS 156

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BLAST of CsGy5G007660 vs. TAIR10
Match: AT3G46230.1 (heat shock protein 17.4)

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-60
Identity = 110/157 (70.06%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSL+PSFFGGRRTNVFDPFSLD WDPF+GF  +  L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F AD+PG+ K+EVKVEV++G +LQISGERS E EEK+D WHR+ERSSG+F+RRFRLPE
Sbjct: 61  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAKV+EVKASMENGVL+VTVPKV+E KPE +KS++I+
Sbjct: 121 NAKVEEVKASMENGVLSVTVPKVQESKPE-VKSVDIS 155

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BLAST of CsGy5G007660 vs. TAIR10
Match: AT5G59720.1 (heat shock protein 18.2)

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-58
Identity = 111/159 (69.81%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQG-FSFSNSLSNLPS----SAFANTRIDWKETP 60
           MSLIPS FGGRR+NVFDPFS D WDPF+G F+ S++L+N  +    +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           +AH+F ADLPG+ K+EVKVEV++  VLQISGERSKE EEKNDKWHR+ER+SG+F+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAK++EVKA+MENGVLTV VPK  EKKP+ +KSI+I+
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQ-VKSIDIS 158

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BLAST of CsGy5G007660 vs. TAIR10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 203.8 bits (517), Expect = 8.0e-53
Identity = 103/155 (66.45%), Postives = 129/155 (83.23%), Query Frame = 0


Query: 1   MSLIPSFF-GGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHI 60
           MS+IPSFF   RR+N+FDPFSLD WDPF+  + S+SLS   +SA  N R+DW+ETP+AH+
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT-SSSLSR-ENSAIVNARVDWRETPEAHV 60

Query: 61  FTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENA 120
           F ADLPG+ K+EVKVE++E  VL+ISGER  E+E+KND WHR+ERSSGQF RRFRLPEN 
Sbjct: 61  FKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENV 120

Query: 121 KVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           K+D+VKA+MENGVLTVTVPK E KK + +KSI+I+
Sbjct: 121 KMDQVKAAMENGVLTVTVPKAETKKAD-VKSIQIS 152

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BLAST of CsGy5G007660 vs. TAIR10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 201.4 bits (511), Expect = 4.0e-52
Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 0


Query: 1   MSLIPSFFGGRR--TNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAH 60
           MSLIPSFFG  R   ++FDPFSLD WDPF+   F +SLS   +SA  N R+DWKET +AH
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG-ETSAITNARVDWKETAEAH 60

Query: 61  IFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPEN 120
           +F ADLPG+ K+EVKVE+++  VL+ISGER  E+EEK D WHR+ERSSGQF R+F+LPEN
Sbjct: 61  VFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPEN 120

Query: 121 AKVDEVKASMENGVLTVTVPKVEE-KKPEIIKSIEIT 155
            K+D+VKASMENGVLTVTVPKVEE KK   +KSI+I+
Sbjct: 121 VKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDIS 156

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BLAST of CsGy5G007660 vs. Swiss-Prot
Match: sp|P13853|HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 6.4e-60
Identity = 112/157 (71.34%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSLIPS FGGRRTNVFDPFSLD +DPF+GF   + L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F ADLPG+ K+EVKVEV++G +LQISGERS E EEKNDKWHR+ERSSG+F RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAK++E+KASMENGVL+VTVPKV EKKPE +KSI+I+
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPE-VKSIDIS 156

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BLAST of CsGy5G007660 vs. Swiss-Prot
Match: sp|P27396|HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.4e-60
Identity = 114/157 (72.61%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSN---LPSSAFANTRIDWKETPQA 60
           MS+IPSFFGGRR+NVFDPFSLD WDPF+ F    S ++     ++AF NT IDWKETPQA
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F ADLPG+ K+EVKVE++EG+VLQISGER+KE+EEKNDKWHR+ERSSG+F+RRFRLPE
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAKVDEVKA+M NGV+TVTVPKVE KKPE +K+I+I+
Sbjct: 121 NAKVDEVKAAMANGVVTVTVPKVEIKKPE-VKAIDIS 156

[Close]

BLAST of CsGy5G007660 vs. Swiss-Prot
Match: sp|P02519|HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-59
Identity = 112/154 (72.73%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60
           MSLIPSFFGGRR++VFDPFSLD WDPF+ F F +SLS   +SAF +TR+DWKETP+AH+F
Sbjct: 1   MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLS-AENSAFVSTRVDWKETPEAHVF 60

Query: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120
            AD+PG+ K+EVK+E+Q+GRVLQISGER+ E+E+KND WHR+ERSSG+ VRRFRLPENAK
Sbjct: 61  KADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           VD+VKASMENGVLTVTVPK E KKP+ +K+I+I+
Sbjct: 121 VDQVKASMENGVLTVTVPKEEIKKPD-VKAIDIS 152

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BLAST of CsGy5G007660 vs. Swiss-Prot
Match: sp|P27880|HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.2e-59
Identity = 113/158 (71.52%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSL--SNLP--SSAFANTRIDWKETPQ 60
           MSLIPSFFGGRR+NVFDPFSLD WDPF+ F F+NS   ++ P  +SAF +TR+DWKETP+
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPE 60

Query: 61  AHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLP 120
           AH+F ADLPG+ K+EVKVE+++ RVLQISGERS E+E+KND+WHR+ERSSG+F+RRFRLP
Sbjct: 61  AHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLP 120

Query: 121 ENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           ENAK+D+VKA+MENGVLTVTVPK E KKPE +K+I+I+
Sbjct: 121 ENAKMDQVKAAMENGVLTVTVPKEEVKKPE-VKTIDIS 157

[Close]

BLAST of CsGy5G007660 vs. Swiss-Prot
Match: sp|P19036|HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 3.2e-59
Identity = 110/157 (70.06%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSL+PSFFGGRRTNVFDPFSLD WDPF+GF  +  L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F AD+PG+ K+EVKVEV++G +LQISGERS E EEK+D WHR+ERSSG+F+RRFRLPE
Sbjct: 61  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAKV+EVKASMENGVL+VTVPKV+E KPE +KS++I+
Sbjct: 121 NAKVEEVKASMENGVLSVTVPKVQESKPE-VKSVDIS 155

[Close]

BLAST of CsGy5G007660 vs. TrEMBL
Match: tr|A0A0A0KQF0|A0A0A0KQF0_CUCSA (Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5G198120 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60
           MSLIPSFFGGRRT+VFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF
Sbjct: 1   MSLIPSFFGGRRTHVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60

Query: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120
           TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK
Sbjct: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 157
           VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH
Sbjct: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 156

[Close]

BLAST of CsGy5G007660 vs. TrEMBL
Match: tr|A0A0A0KP10|A0A0A0KP10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPSFFGGRRTNVFDPFSLD WDPFQGF FSNSL NLPS     SAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQF+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPE-IKSIEIS 158

[Close]

BLAST of CsGy5G007660 vs. TrEMBL
Match: tr|A0A1S3CLZ4|A0A1S3CLZ4_CUCME (17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103502478 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.3e-69
Identity = 140/159 (88.05%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSA-----FANTRIDWKETP 60
           MSLIPSFF GRR+N FDPFSLD WDPFQGF FSNSL+N PSSA     FANTRIDWKETP
Sbjct: 1   MSLIPSFFRGRRSNDFDPFSLDVWDPFQGFPFSNSLANFPSSARETSTFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVL VTVPK+EEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLMVTVPKMEEKKPE-IKSIEIS 158

[Close]

BLAST of CsGy5G007660 vs. TrEMBL
Match: tr|A0A1S3CIN2|A0A1S3CIN2_CUCME (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.8e-68
Identity = 136/158 (86.08%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           M+LIPS FGGRR+NVFDPFSLD WDPF+GFSFSNSL+NLPS     SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIF ADLPGI K+EVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEI 154
           PENAKV+EVKA+MENGVLTVTVPK+EEKKPE IKSI+I
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPE-IKSIDI 157

[Close]

BLAST of CsGy5G007660 vs. TrEMBL
Match: tr|A0A1S3CQK2|A0A1S3CQK2_CUCME (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC103503166 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-67
Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPS FGGRR+NVFDPFSLD WDPF+GF FSNSL+N+PS     SAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIF ADLPGI K+EVKVEV+EGRVLQISGERSKEQEEKNDKWHR+ERSSG+F RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKV+EVKA+MENGVLTVTVPKVEEKKPE IKSI+I+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPE-IKSIDIS 158

The following BLAST results are available for this feature:

BLAST of CsGy5G007660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150236.2	2.2e-80	99.36	PREDICTED: 17.3 kDa class I heat shock protein-like [Cucumis sativus] >KGN50622....	[more]
XP_011654976.1	3.3e-73	93.08	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis sativus] >KGN50609....	[more]
XP_008464642.1	6.5e-69	88.05	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo]	[more]
XP_008463198.1	7.2e-68	86.08	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
XP_008465538.1	1.6e-67	84.91	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]

BLAST of CsGy5G007660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53540.1	3.6e-61	71.34	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.8e-60	70.06	heat shock protein 17.4	[more]
AT5G59720.1	1.7e-58	69.81	heat shock protein 18.2	[more]
AT2G29500.1	8.0e-53	66.45	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	4.0e-52	65.61	HSP20-like chaperones superfamily protein	[more]

BLAST of CsGy5G007660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P13853\|HS17C_ARATH	6.4e-60	71.34	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
sp\|P27396\|HSP11_DAUCA	8.4e-60	72.61	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
sp\|P02519\|HSP11_SOYBN	2.4e-59	72.73	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
sp\|P27880\|HSP12_MEDSA	3.2e-59	71.52	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
sp\|P19036\|HSP17_ARATH	3.2e-59	70.06	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]

BLAST of CsGy5G007660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KQF0\|A0A0A0KQF0_CUCSA	1.4e-80	99.36	Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5...	[more]
tr\|A0A0A0KP10\|A0A0A0KP10_CUCSA	2.2e-73	93.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 SV=1	[more]
tr\|A0A1S3CLZ4\|A0A1S3CLZ4_CUCME	4.3e-69	88.05	17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103502478...	[more]
tr\|A0A1S3CIN2\|A0A1S3CIN2_CUCME	4.8e-68	86.08	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]
tr\|A0A1S3CQK2\|A0A1S3CQK2_CUCME	1.1e-67	84.91	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo OX=3656 GN=LOC1035031...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR031107	HSP20
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G007660.1	CsGy5G007660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 10..154 e-value: 2.3E-45 score: 155.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 17..149
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 e-value: 2.4E-29 score: 101.4
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 40..156 score: 30.699
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY	coord: 4..154
None	No IPR available	PANTHER	PTHR11527:SF241	17.4 KDA CLASS I HEAT SHOCK PROTEIN-RELATED	coord: 4..154
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 48..139 e-value: 2.78919E-54 score: 167.867

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G007660	Cla004315	Watermelon (97103) v1	cgybwmB359
CsGy5G007660	CmaCh04G011450	Cucurbita maxima (Rimu)	cgybcmaB673
CsGy5G007660	Lsi04G009470	Bottle gourd (USVL1VR-Ls)	cgyblsiB331

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G007660	Cucurbita maxima (Rimu)	cgybcmaB689
CsGy5G007660	Cucumber (Gy14) v2	cgybcgybB092
CsGy5G007660	Cucumber (Gy14) v2	cgybcgybB143
CsGy5G007660	Cucurbita maxima (Rimu)	cgybcmaB594
CsGy5G007660	Cucurbita maxima (Rimu)	cgybcmaB645
CsGy5G007660	Cucurbita maxima (Rimu)	cgybcmaB674
CsGy5G007660	Cucurbita maxima (Rimu)	cgybcmaB697
CsGy5G007660	Cucurbita moschata (Rifu)	cgybcmoB581
CsGy5G007660	Cucurbita moschata (Rifu)	cgybcmoB623
CsGy5G007660	Cucurbita moschata (Rifu)	cgybcmoB651
CsGy5G007660	Cucurbita moschata (Rifu)	cgybcmoB652
CsGy5G007660	Cucurbita moschata (Rifu)	cgybcmoB670
CsGy5G007660	Cucurbita moschata (Rifu)	cgybcmoB677
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB591
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB614
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB646
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB647
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB661
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB670
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB675
CsGy5G007660	Cucurbita pepo (Zucchini)	cgybcpeB701
CsGy5G007660	Cucumber (Chinese Long) v2	cgybcuB212
CsGy5G007660	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G007660	Cucumber (Chinese Long) v2	cgybcuB235
CsGy5G007660	Bottle gourd (USVL1VR-Ls)	cgyblsiB326
CsGy5G007660	Bottle gourd (USVL1VR-Ls)	cgyblsiB330
CsGy5G007660	Melon (DHL92) v3.5.1	cgybmeB342
CsGy5G007660	Melon (DHL92) v3.5.1	cgybmeB311
CsGy5G007660	Melon (DHL92) v3.5.1	cgybmeB344
CsGy5G007660	Melon (DHL92) v3.6.1	cgybmedB312
CsGy5G007660	Melon (DHL92) v3.6.1	cgybmedB341
CsGy5G007660	Watermelon (Charleston Gray)	cgybwcgB320
CsGy5G007660	Watermelon (Charleston Gray)	cgybwcgB369
CsGy5G007660	Watermelon (97103) v1	cgybwmB344
CsGy5G007660	Watermelon (97103) v1	cgybwmB358
CsGy5G007660	Watermelon (97103) v1	cgybwmB407
CsGy5G007660	Wild cucumber (PI 183967)	cgybcpiB214
CsGy5G007660	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G007660	Wild cucumber (PI 183967)	cgybcpiB241
CsGy5G007660	Silver-seed gourd	carcgybB0098
CsGy5G007660	Silver-seed gourd	carcgybB0174
CsGy5G007660	Silver-seed gourd	carcgybB0279
CsGy5G007660	Silver-seed gourd	carcgybB0670
CsGy5G007660	Silver-seed gourd	carcgybB0986
CsGy5G007660	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G007660	Cucumber (Chinese Long) v3	cgybcucB240
CsGy5G007660	Watermelon (97103) v2	cgybwmbB346
CsGy5G007660	Watermelon (97103) v2	cgybwmbB375
CsGy5G007660	Wax gourd	cgybwgoB467
CsGy5G007660	Wax gourd	cgybwgoB487