CmoCh15G001240 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G001240
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	18.2 kDa class I heat shock protein
Location	Cmo_Chr15 : 597875 .. 598357 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTAATTCCTAGTTTTCTCAGCGGTCGGCGGACCAACGTGTTCGATCCATTCTCCCTGGATATATGGGATCCATTAGAAGGGATGCAATTTCCGGGGAGTCTGACGAAGGTTCCATCTTCCGGCGCAGGCGAAACGACGGCGATTGCAAACACTCGGATCGACTGGAGAGAGACACCAGAGGCTCACATATTCAAGGCGGATCTCCCGGGGCTGAAGAAGGAAGAAGTGAAAGTGGAGGTTGAGGAAGGGAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAAGAAGAGGAGAGGAACGAGAAATGGCACAGAGTGGAGAGGAGCATGGGGAAGTTCATGCGGCGATTCCGGCTGCCGGAGAACGCGAAAATGGATGAAATTAACGCCAAAATGGAAAACGGAGTGCTGACTGTGACGGTACCTAAACAGGAGGAGAGGAAGCCGGAGGTCAAGGCCATCGATATCGCCGGATAG

mRNA sequence

ATGTCGTTAATTCCTAGTTTTCTCAGCGGTCGGCGGACCAACGTGTTCGATCCATTCTCCCTGGATATATGGGATCCATTAGAAGGGATGCAATTTCCGGGGAGTCTGACGAAGGTTCCATCTTCCGGCGCAGGCGAAACGACGGCGATTGCAAACACTCGGATCGACTGGAGAGAGACACCAGAGGCTCACATATTCAAGGCGGATCTCCCGGGGCTGAAGAAGGAAGAAGTGAAAGTGGAGGTTGAGGAAGGGAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAAGAAGAGGAGAGGAACGAGAAATGGCACAGAGTGGAGAGGAGCATGGGGAAGTTCATGCGGCGATTCCGGCTGCCGGAGAACGCGAAAATGGATGAAATTAACGCCAAAATGGAAAACGGAGTGCTGACTGTGACGGTACCTAAACAGGAGGAGAGGAAGCCGGAGGTCAAGGCCATCGATATCGCCGGATAG

Coding sequence (CDS)

ATGTCGTTAATTCCTAGTTTTCTCAGCGGTCGGCGGACCAACGTGTTCGATCCATTCTCCCTGGATATATGGGATCCATTAGAAGGGATGCAATTTCCGGGGAGTCTGACGAAGGTTCCATCTTCCGGCGCAGGCGAAACGACGGCGATTGCAAACACTCGGATCGACTGGAGAGAGACACCAGAGGCTCACATATTCAAGGCGGATCTCCCGGGGCTGAAGAAGGAAGAAGTGAAAGTGGAGGTTGAGGAAGGGAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAAGAAGAGGAGAGGAACGAGAAATGGCACAGAGTGGAGAGGAGCATGGGGAAGTTCATGCGGCGATTCCGGCTGCCGGAGAACGCGAAAATGGATGAAATTAACGCCAAAATGGAAAACGGAGTGCTGACTGTGACGGTACCTAAACAGGAGGAGAGGAAGCCGGAGGTCAAGGCCATCGATATCGCCGGATAG

Homology

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BLAST of CmoCh15G001240 vs. Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 2.2e-60
Identity = 113/160 (70.62%), Postives = 133/160 (83.12%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSL+PSF  GRRTNVFDPFSLD+WDP EG   PG LT  P   A +  A  N ++DWRET
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPG-LTNAP---AKDVAAFTNAKVDWRET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKAD+PGLKKEEVKVEVE+G +LQISGERS E EE+++ WHRVERS GKFMRRFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK++E+ A MENGVL+VTVPK +E KPEVK++DI+G
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

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BLAST of CmoCh15G001240 vs. Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 6.5e-60
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPS   GRRTNVFDPFSLD++DP EG   P  L   P   A +  A  N ++DWRET
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP---AMDVAAFTNAKVDWRET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKADLPGL+KEEVKVEVE+G +LQISGERS E EE+N+KWHRVERS GKF RRFR
Sbjct: 61  PEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKM+EI A MENGVL+VTVPK  E+KPEVK+IDI+G
Sbjct: 121 LPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

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BLAST of CmoCh15G001240 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 8.5e-60
Identity = 115/160 (71.88%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MS+IPSF  GRR+NVFDPFSLD+WDP +   FP  +T   S    ET A  NT IDW+ET
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFK--DFP-LVTSSASEFGKETAAFVNTHIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           P+AH+FKADLPGLKKEEVKVE+EEG+VLQISGER+KE+EE+N+KWHRVERS GKF+RRFR
Sbjct: 61  PQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK+DE+ A M NGV+TVTVPK E +KPEVKAIDI+G
Sbjct: 121 LPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

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BLAST of CmoCh15G001240 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-59
Identity = 111/160 (69.38%), Postives = 137/160 (85.62%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPSF  GRR+NVFDPFSLD+WDP +   FP + + + +S   E +A  +TR+DW+ET
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFK--DFPFNNSALSASFPRENSAFVSTRVDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKADLPG+KKEEVKVE+E+ RVLQISGERS E+E++N++WHR+ERS GKFMRRFR
Sbjct: 61  PEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKMD++ A MENGVLTVTVPK+E +KPEVK IDI+G
Sbjct: 121 LPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

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BLAST of CmoCh15G001240 vs. Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.5e-59
Identity = 114/160 (71.25%), Postives = 137/160 (85.62%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPSF SGRR+NVFDPFSLD+WDPL+   FP S +   +S   E  A  +TR+DW+ET
Sbjct: 1   MSLIPSFFSGRRSNVFDPFSLDVWDPLK--DFPFSNSSPSASFPRENPAFVSTRVDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKADLPGLKKEEVKVEVE+ RVLQISGERS E+E++N++WHRVERS GKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKMD++ A MENGVLTVTVPK+E +K EVK+I+I+G
Sbjct: 121 LPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158

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BLAST of CmoCh15G001240 vs. TrEMBL
Match: A0A0A0KD99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G009400 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.1e-69
Identity = 137/160 (85.62%), Postives = 145/160 (90.62%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPSF SGRR+NVFDPFSL+IWDP+EGMQFP +        +GET AIANTRIDWRET
Sbjct: 1   MSLIPSFFSGRRSNVFDPFSLEIWDPIEGMQFPQT--------SGETAAIANTRIDWRET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEE+ERNEKWHRVERSMGKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEDERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKMDEI A MENGVLTV VPKQE R+P+VKAIDIAG
Sbjct: 121 LPENAKMDEIKANMENGVLTVMVPKQEARRPQVKAIDIAG 152

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BLAST of CmoCh15G001240 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.0e-65
Identity = 124/160 (77.50%), Postives = 141/160 (88.12%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           M+L+PS   GRR+NVFDPFSLDIWDP EG  F  SL   PSS A ET+A ANTRIDW+ET
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSS-ARETSAFANTRIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           P+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EE+N+KWHR+ERS GKFMRRFR
Sbjct: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK++E+ A MENGVLTV VPK EE+KPE+K+IDIAG
Sbjct: 121 LPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

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BLAST of CmoCh15G001240 vs. TrEMBL
Match: H6TB47_CITLA (HSP18.1B OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.0e-64
Identity = 124/160 (77.50%), Postives = 144/160 (90.00%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPSF  GRR+NVFDPFSLD+WDP EG  FP +L  +PSS A ET+A ANTRIDW+ET
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSS-ALETSAFANTRIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           P+AHIFKADLPG+KK+EVKVEVEEGRVLQISGERSKE+EE+NEKWHR+ERS GKFMRRFR
Sbjct: 61  PQAHIFKADLPGIKKDEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPE+AK++E+ A MENGVLTVTVPK E +KPE+K+IDI+G
Sbjct: 121 LPEDAKVEEVKASMENGVLTVTVPKVEVKKPEIKSIDISG 159

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BLAST of CmoCh15G001240 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.0e-64
Identity = 124/160 (77.50%), Postives = 141/160 (88.12%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           M+LIP+   GRR+NVFDPFSLD+WDP EG  F  SL  +PSS A ET+A ANTRIDW+ET
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSS-ARETSAFANTRIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           P+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE EE+N+KWHR+ERS GKFMRRFR
Sbjct: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK +E+ A MENGVLTVTVPK EE+KPEVK+IDI+G
Sbjct: 121 LPENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

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BLAST of CmoCh15G001240 vs. TrEMBL
Match: A0A061GW22_THECC (HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_041856 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.0e-64
Identity = 126/160 (78.75%), Postives = 139/160 (86.88%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPS   GRRTNVFDPFSLD+WDP +G         VPSS A ET+A AN RIDW+ET
Sbjct: 1   MSLIPSLFGGRRTNVFDPFSLDVWDPFDGFSNSALANNVPSS-ARETSAFANARIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKADLPGLKKEEVKVEVEEGRVLQISGERSKE+EE+N+ WHRVERS GKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEEGRVLQISGERSKEQEEKNDTWHRVERSCGKFLRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKMD+I A MENGVLTVTVPK+EE+KPEVKAIDI+G
Sbjct: 121 LPENAKMDQIKASMENGVLTVTVPKEEEKKPEVKAIDISG 159

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BLAST of CmoCh15G001240 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 233.0 bits (593), Expect = 1.3e-61
Identity = 113/160 (70.62%), Postives = 133/160 (83.12%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSL+PSF  GRRTNVFDPFSLD+WDP EG   PG LT  P   A +  A  N ++DWRET
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPG-LTNAP---AKDVAAFTNAKVDWRET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKAD+PGLKKEEVKVEVE+G +LQISGERS E EE+++ WHRVERS GKFMRRFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK++E+ A MENGVL+VTVPK +E KPEVK++DI+G
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmoCh15G001240 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 231.5 bits (589), Expect = 3.7e-61
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPS   GRRTNVFDPFSLD++DP EG   P  L   P   A +  A  N ++DWRET
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP---AMDVAAFTNAKVDWRET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKADLPGL+KEEVKVEVE+G +LQISGERS E EE+N+KWHRVERS GKF RRFR
Sbjct: 61  PEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKM+EI A MENGVL+VTVPK  E+KPEVK+IDI+G
Sbjct: 121 LPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmoCh15G001240 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 228.0 bits (580), Expect = 4.1e-60
Identity = 113/160 (70.62%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPS   GRR+NVFDPFS D+WDP EG   P S     +S A +  A  N R+DW+ET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSAL-ANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAH+FKADLPGLKKEEVKVEVE+  VLQISGERSKE EE+N+KWHRVER+ GKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKM+E+ A MENGVLTV VPK  E+KP+VK+IDI+G
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh15G001240 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 205.7 bits (522), Expect = 2.2e-53
Identity = 105/164 (64.02%), Postives = 132/164 (80.49%), Query Frame = 1


Query: 1   MSLIPSFL-SGRRTN-VFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWR 60
           MSLIPSF  + RR+N +FDPFSLD+WDP + +QFP SL+       GET+AI N R+DW+
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLS-------GETSAITNARVDWK 60

Query: 61  ETPEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRR 120
           ET EAH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+EE+ + WHRVERS G+F R+
Sbjct: 61  ETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRK 120

Query: 121 FRLPENAKMDEINAKMENGVLTVTVPKQEE--RKPEVKAIDIAG 161
           F+LPEN KMD++ A MENGVLTVTVPK EE  +K +VK+IDI+G
Sbjct: 121 FKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmoCh15G001240 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 204.9 bits (520), Expect = 3.7e-53
Identity = 103/161 (63.98%), Postives = 127/161 (78.88%), Query Frame = 1


Query: 1   MSLIPSFLSG-RRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRE 60
           MS+IPSF +  RR+N+FDPFSLD+WDP + +          SS + E +AI N R+DWRE
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKEL--------TSSSLSRENSAIVNARVDWRE 60

Query: 61  TPEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRF 120
           TPEAH+FKADLPGLKKEEVKVE+EE  VL+ISGER  E+E++N+ WHRVERS G+F RRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RLPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           RLPEN KMD++ A MENGVLTVTVPK E +K +VK+I I+G
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmoCh15G001240 vs. NCBI nr
Match: gi|449441338|ref|XP_004138439.1| (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 5.9e-69
Identity = 137/160 (85.62%), Postives = 145/160 (90.62%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPSF SGRR+NVFDPFSL+IWDP+EGMQFP +        +GET AIANTRIDWRET
Sbjct: 1   MSLIPSFFSGRRSNVFDPFSLEIWDPIEGMQFPQT--------SGETAAIANTRIDWRET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEE+ERNEKWHRVERSMGKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEDERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKMDEI A MENGVLTV VPKQE R+P+VKAIDIAG
Sbjct: 121 LPENAKMDEIKANMENGVLTVMVPKQEARRPQVKAIDIAG 152

[Close]

BLAST of CmoCh15G001240 vs. NCBI nr
Match: gi|659081610|ref|XP_008441421.1| (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-68
Identity = 138/160 (86.25%), Postives = 146/160 (91.25%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MS+IPSF SGRR+NVFDPFSL++WDP EGMQFP      P+S  GET+AIANTRIDWRET
Sbjct: 1   MSMIPSFFSGRRSNVFDPFSLELWDPSEGMQFP------PTS--GETSAIANTRIDWRET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR
Sbjct: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAKMDEI A MENGVLTV VPKQE R+P+VKAIDIAG
Sbjct: 121 LPENAKMDEIKANMENGVLTVMVPKQEARRPQVKAIDIAG 152

[Close]

BLAST of CmoCh15G001240 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 1.0e-65
Identity = 126/160 (78.75%), Postives = 143/160 (89.38%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           M+LIPS   GRR+NVFDPFSLDIWDP EG  F  SL  +PSS A ET+A ANTRIDW+ET
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSS-ARETSAFANTRIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           P+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EE+N+KWHR+ERS GKFMRRFR
Sbjct: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK++E+ A MENGVLTVTVPK EE+KPE+K+IDIAG
Sbjct: 121 LPENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmoCh15G001240 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 5.1e-65
Identity = 127/160 (79.38%), Postives = 142/160 (88.75%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           MSLIPS   GRR+NVFDPFSLDIWDP EG  F  SL  VPSS A ET+A ANTRIDW+ET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSS-AVETSAFANTRIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           P+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EE+N+KWHRVERS GKF RRFR
Sbjct: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK++E+ A MENGVLTVTVPK EE+KPE+K+IDI+G
Sbjct: 121 LPENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of CmoCh15G001240 vs. NCBI nr
Match: gi|778701197|ref|XP_004150235.2| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-64
Identity = 124/160 (77.50%), Postives = 141/160 (88.12%), Query Frame = 1


Query: 1   MSLIPSFLSGRRTNVFDPFSLDIWDPLEGMQFPGSLTKVPSSGAGETTAIANTRIDWRET 60
           M+L+PS   GRR+NVFDPFSLDIWDP EG  F  SL   PSS A ET+A ANTRIDW+ET
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSS-ARETSAFANTRIDWKET 60

Query: 61  PEAHIFKADLPGLKKEEVKVEVEEGRVLQISGERSKEEEERNEKWHRVERSMGKFMRRFR 120
           P+AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EE+N+KWHR+ERS GKFMRRFR
Sbjct: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFR 120

Query: 121 LPENAKMDEINAKMENGVLTVTVPKQEERKPEVKAIDIAG 161
           LPENAK++E+ A MENGVLTV VPK EE+KPE+K+IDIAG
Sbjct: 121 LPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

The following BLAST results are available for this feature:

BLAST of CmoCh15G001240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP17_ARATH	2.2e-60	70.63	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=...	[more]
HS17C_ARATH	6.5e-60	71.25	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 S...	[more]
HSP11_DAUCA	8.5e-60	71.88	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HSP12_MEDSA	1.4e-59	69.38	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP11_PEA	2.5e-59	71.25	18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1	[more]

BLAST of CmoCh15G001240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD99_CUCSA	4.1e-69	85.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G009400 PE=3 SV=1	[more]
A0A0A0KLU0_CUCSA	8.0e-65	77.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]
H6TB47_CITLA	1.0e-64	77.50	HSP18.1B OS=Citrullus lanatus PE=2 SV=1	[more]
H6TB42_CITLA	3.0e-64	77.50	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
A0A061GW22_THECC	3.0e-64	78.75	HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_041856 PE=3 ...	[more]

BLAST of CmoCh15G001240 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46230.1	1.3e-61	70.63	heat shock protein 17.4	[more]
AT1G53540.1	3.7e-61	71.25	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	4.1e-60	70.63	heat shock protein 18.2	[more]
AT1G07400.1	2.2e-53	64.02	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.7e-53	63.98	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh15G001240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441338\|ref\|XP_004138439.1\|	5.9e-69	85.63	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|659081610\|ref\|XP_008441421.1\|	1.0e-68	86.25	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|659126469\|ref\|XP_008463198.1\|	1.0e-65	78.75	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|659131157\|ref\|XP_008465538.1\|	5.1e-65	79.38	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]
gi\|778701197\|ref\|XP_004150235.2\|	1.1e-64	77.50	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G001240.1	CmoCh15G001240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..158 score: 1.3
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 56..145 score: 26
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 12..158 score: 2.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 38..159 score: 1.34
None	No IPR available	PANTHER	PTHR11527:SF158	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 1..160 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G001240	Cucsa.136390	Cucumber (Gy14) v1	cgycmoB0366
CmoCh15G001240	Cucsa.164760	Cucumber (Gy14) v1	cgycmoB0468
CmoCh15G001240	CmaCh03G003890	Cucurbita maxima (Rimu)	cmacmoB643
CmoCh15G001240	CmaCh04G011450	Cucurbita maxima (Rimu)	cmacmoB695
CmoCh15G001240	Cla006565	Watermelon (97103) v1	cmowmB274
CmoCh15G001240	Cla018155	Watermelon (97103) v1	cmowmB272
CmoCh15G001240	Csa6G009400	Cucumber (Chinese Long) v2	cmocuB296
CmoCh15G001240	MELO3C008263	Melon (DHL92) v3.5.1	cmomeB258
CmoCh15G001240	CSPI06G01410	Wild cucumber (PI 183967)	cmocpiB305
CmoCh15G001240	CSPI05G10200	Wild cucumber (PI 183967)	cmocpiB294
CmoCh15G001240	Lsi04G009450	Bottle gourd (USVL1VR-Ls)	cmolsiB267
CmoCh15G001240	Lsi03G003400	Bottle gourd (USVL1VR-Ls)	cmolsiB265
CmoCh15G001240	Cp4.1LG01g11230	Cucurbita pepo (Zucchini)	cmocpeB282
CmoCh15G001240	MELO3C008263.2	Melon (DHL92) v3.6.1	cmomedB292
CmoCh15G001240	CsaV3_5G008680	Cucumber (Chinese Long) v3	cmocucB0342
CmoCh15G001240	CsaV3_6G001540	Cucumber (Chinese Long) v3	cmocucB0358
CmoCh15G001240	Cla97C07G132280	Watermelon (97103) v2	cmowmbB297
CmoCh15G001240	Cla97C11G213430	Watermelon (97103) v2	cmowmbB278
CmoCh15G001240	Bhi07G000551	Wax gourd	cmowgoB0403
CmoCh15G001240	Bhi04G001923	Wax gourd	cmowgoB0392
CmoCh15G001240	CsGy5G007540	Cucumber (Gy14) v2	cgybcmoB581
CmoCh15G001240	CsGy6G001460	Cucumber (Gy14) v2	cgybcmoB722
CmoCh15G001240	Carg01075	Silver-seed gourd	carcmoB0215
CmoCh15G001240	Carg12510	Silver-seed gourd	carcmoB1336

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G001240	CmoCh03G003990	Cucurbita moschata (Rifu)	cmocmoB253
CmoCh15G001240	CmoCh04G012110	Cucurbita moschata (Rifu)	cmocmoB266

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G001240	Cucurbita moschata (Rifu)	cmocmoB192
CmoCh15G001240	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh15G001240	Cucurbita moschata (Rifu)	cmocmoB267
CmoCh15G001240	Cucurbita moschata (Rifu)	cmocmoB272
CmoCh15G001240	Cucumber (Gy14) v1	cgycmoB0500
CmoCh15G001240	Cucurbita maxima (Rimu)	cmacmoB248
CmoCh15G001240	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G001240	Cucurbita maxima (Rimu)	cmacmoB692
CmoCh15G001240	Wild cucumber (PI 183967)	cmocpiB281
CmoCh15G001240	Cucumber (Chinese Long) v2	cmocuB274
CmoCh15G001240	Melon (DHL92) v3.5.1	cmomeB265
CmoCh15G001240	Watermelon (Charleston Gray)	cmowcgB236
CmoCh15G001240	Watermelon (Charleston Gray)	cmowcgB240
CmoCh15G001240	Watermelon (Charleston Gray)	cmowcgB252
CmoCh15G001240	Watermelon (Charleston Gray)	cmowcgB261
CmoCh15G001240	Watermelon (97103) v1	cmowmB246
CmoCh15G001240	Cucurbita pepo (Zucchini)	cmocpeB265
CmoCh15G001240	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G001240	Cucurbita pepo (Zucchini)	cmocpeB279
CmoCh15G001240	Cucurbita pepo (Zucchini)	cmocpeB284
CmoCh15G001240	Cucurbita pepo (Zucchini)	cmocpeB291
CmoCh15G001240	Bottle gourd (USVL1VR-Ls)	cmolsiB259
CmoCh15G001240	Bottle gourd (USVL1VR-Ls)	cmolsiB264
CmoCh15G001240	Cucumber (Gy14) v2	cgybcmoB298
CmoCh15G001240	Melon (DHL92) v3.6.1	cmomedB300
CmoCh15G001240	Silver-seed gourd	carcmoB0031
CmoCh15G001240	Silver-seed gourd	carcmoB0120
CmoCh15G001240	Silver-seed gourd	carcmoB0362
CmoCh15G001240	Silver-seed gourd	carcmoB0752
CmoCh15G001240	Silver-seed gourd	carcmoB0788
CmoCh15G001240	Silver-seed gourd	carcmoB0917
CmoCh15G001240	Cucumber (Chinese Long) v3	cmocucB0329
CmoCh15G001240	Watermelon (97103) v2	cmowmbB273
CmoCh15G001240	Watermelon (97103) v2	cmowmbB285