CmaCh04G009100 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G009100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	TIR-NBS class disease resistance protein
Location	Cma_Chr04 : 4729153 .. 4729995 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGTGTGGCTGCCGTCGCGAAAATCACGCCGAGACTGTTTCTAGCTCAGCTGGGGAGCAAGCAGTTGCAGAGGGGTATTGCCAAACCCTGCGATGTGTTCATAAACCACAGAGGCGTCGACACCAAGAAGACAGTGGCGGCGTTGCTGTACGACAGGCTCATCCGGGGCAACTTCCGTCCGTTTCTTGATTACAGAAATTTGAAGCCTGGGGAGAAGCTGTTCGACGAACTCCACGGCGCCATTAGACAGTGTAAAGTGGGCGTGGCTGTGTTTTCGCCTCGGTATTGCGAGTCTTATTTCTGCCTCCACGAGTTGGCTATGATCATCGAGTCCAACAAGAAGGTACCCCAAATGGGTTTTCTTTGAATGTTTACAATTAGAATTCAACAACATCATCAAATGAATTGAATTATTGAACAGGTGATTCCTATATTTTGTGATGTGAACCCATCTCAGCTTCGGATAAAGGAGGACGATGGGTACGAAACAGAGGATCTGAGAAGGTTCAATTGGGCTCTTGAACAAGCTAACCAGTTGGAGGGAATCAAATTTAATTCCTCAAAACAGTAAGTAACAAAGATGTGGGCTAATCATCCTACAAAATTAATGTTTATATCCCTCTAATTAACCTAATTCTGTTGTTTCAGGACCTTATCAGACATTGTGACAAGGGCTTCAAATATTGTGATCAGTAGTTTGGTTGAGATGGACGGTAGGGATGAACAGTAGGCCCAACATCCAACACTTTATTCTTATTCTTTTATACATCATTCAATTTGTTAATTATTTCCTCTTCTCTCCAACACACAAAATGTAGCATGATTATGCATAATAACA

mRNA sequence

ATGAACCGTGTGGCTGCCGTCGCGAAAATCACGCCGAGACTGTTTCTAGCTCAGCTGGGGAGCAAGCAGTTGCAGAGGGGTATTGCCAAACCCTGCGATGTGTTCATAAACCACAGAGGCGTCGACACCAAGAAGACAGTGGCGGCGTTGCTGTACGACAGGCTCATCCGGGGCAACTTCCGTCCGTTTCTTGATTACAGAAATTTGAAGCCTGGGGAGAAGCTGTTCGACGAACTCCACGGCGCCATTAGACAGTGTAAAGTGGGCGTGGCTGTGTTTTCGCCTCGGTATTGCGAGTCTTATTTCTGCCTCCACGAGTTGGCTATGATCATCGAGTCCAACAAGAAGGTGATTCCTATATTTTGTGATGTGAACCCATCTCAGCTTCGGATAAAGGAGGACGATGGGTACGAAACAGAGGATCTGAGAAGGTTCAATTGGGCTCTTGAACAAGCTAACCAGTTGGAGGGAATCAAATTTAATTCCTCAAAACAGACCTTATCAGACATTGTGACAAGGGCTTCAAATATTGTGATCAGTAGTTTGGTTGAGATGGACGGTAGGGATGAACAGTAGGCCCAACATCCAACACTTTATTCTTATTCTTTTATACATCATTCAATTTGTTAATTATTTCCTCTTCTCTCCAACACACAAAATGTAGCATGATTATGCATAATAACA

Coding sequence (CDS)

ATGAACCGTGTGGCTGCCGTCGCGAAAATCACGCCGAGACTGTTTCTAGCTCAGCTGGGGAGCAAGCAGTTGCAGAGGGGTATTGCCAAACCCTGCGATGTGTTCATAAACCACAGAGGCGTCGACACCAAGAAGACAGTGGCGGCGTTGCTGTACGACAGGCTCATCCGGGGCAACTTCCGTCCGTTTCTTGATTACAGAAATTTGAAGCCTGGGGAGAAGCTGTTCGACGAACTCCACGGCGCCATTAGACAGTGTAAAGTGGGCGTGGCTGTGTTTTCGCCTCGGTATTGCGAGTCTTATTTCTGCCTCCACGAGTTGGCTATGATCATCGAGTCCAACAAGAAGGTGATTCCTATATTTTGTGATGTGAACCCATCTCAGCTTCGGATAAAGGAGGACGATGGGTACGAAACAGAGGATCTGAGAAGGTTCAATTGGGCTCTTGAACAAGCTAACCAGTTGGAGGGAATCAAATTTAATTCCTCAAAACAGACCTTATCAGACATTGTGACAAGGGCTTCAAATATTGTGATCAGTAGTTTGGTTGAGATGGACGGTAGGGATGAACAGTAG

Protein sequence

MNRVAAVAKITPRLFLAQLGSKQLQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQLRIKEDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRDEQ

Homology

[Close]

BLAST of CmaCh04G009100 vs. Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.9e-15
Identity = 59/180 (32.78%), Postives = 92/180 (51.11%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF++ RG DT+KT  + LY+ L     + F D + L+ G  +  EL  AI + +  + V
Sbjct: 13  DVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIVV 72

Query: 93  FSPRYCESYFCLHELAMIIESNKK----VIPIFCDVNPSQLRIKED------DGYET--- 152
           FS  Y  S +CL+EL  I+E   +    VIPIF DV+PS +R +++      + +ET   
Sbjct: 73  FSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYK 132

Query: 153 ---EDLRRFNWALEQANQLEGIKFNSSK-------QTLSDIVTRASNIVISSLVEMDGRD 190
              E ++R+  AL +A  L+G   N  K       Q +  I ++   I +S L  + G D
Sbjct: 133 DDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQNIVGID 192

[Close]

BLAST of CmaCh04G009100 vs. Swiss-Prot
Match: TIR_ARATH (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana GN=TIR PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF++ RG DT+    + LY  L+R + R F D + L+ G++   EL   I   +  V V
Sbjct: 10  DVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVV 69

Query: 93  FSPRYCESYFCLHELAMIIESNKK----VIPIFCDVNPSQLR 131
            S  Y  S +CL EL  I++  KK    V+PIF  V P+ +R
Sbjct: 70  VSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVR 111

[Close]

BLAST of CmaCh04G009100 vs. Swiss-Prot
Match: RPP5_ARATH (Disease resistance protein RPP5 OS=Arabidopsis thaliana GN=RPP5 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF +  GVD +KT  + L + L   +   F+D+  ++    +  EL  AIR+ ++ + +
Sbjct: 13  DVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDH-GIERSRTIAPELISAIREARISIVI 72

Query: 93  FSPRYCESYFCLHELAMI----IESNKKVIPIFCDVNPSQLR 131
           FS  Y  S +CL+EL  I     +  + VIP+F DV+PS++R
Sbjct: 73  FSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVR 113

[Close]

BLAST of CmaCh04G009100 vs. Swiss-Prot
Match: RPP4_ARATH (Disease resistance protein RPP4 OS=Arabidopsis thaliana GN=RPP4 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.6e-10
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF +  GVD +KT  + L + L R +   F+D+  ++    + D L  AIR+ ++ + +
Sbjct: 14  DVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCI-IADALITAIREARISIVI 73

Query: 93  FSPRYCESYFCLHELAMIIESNKK----VIPIFCDVNPSQLR 131
           FS  Y  S +CL+EL  I +  KK    VIP+F  V+PS +R
Sbjct: 74  FSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVR 114

[Close]

BLAST of CmaCh04G009100 vs. Swiss-Prot
Match: VICTR_ARATH (Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response OS=Arabidopsis thaliana GN=VICTR PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 44/141 (31.21%), Postives = 69/141 (48.94%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF++  G D + T  +     L R     F D   ++    L+ +L  AI+  ++ V V
Sbjct: 13  DVFLSFSGKDVRVTFRSHFLKELDRKLISAFRD-NEIERSHSLWPDLEQAIKDSRIAVVV 72

Query: 93  FSPRYCESYFCLHELAMIIESNKK-VIPIFCDVNPSQLRIKEDDGYETEDLRRFNWALEQ 152
           FS  Y  S +CL+EL  I+  N K +IP+F  V+PSQ+R +         +  F    E+
Sbjct: 73  FSKNYASSSWCLNELLEIVNCNDKIIIPVFYGVDPSQVRYQ---------IGEFGSIFEK 132

Query: 153 A--NQLEGIKFNSSKQTLSDI 171
               Q E +K N  K+ L+D+
Sbjct: 133 TCKRQTEEVK-NQWKKALTDV 142

[Close]

BLAST of CmaCh04G009100 vs. TrEMBL
Match: B9N1K6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41430g PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.3e-58
Identity = 112/181 (61.88%), Postives = 136/181 (75.14%), Query Frame = 1


Query: 12  PRLFLAQLGSKQ--LQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNL 71
           PR FL Q  S Q  +   IAKPCDVFINHRG+DTK+TV  LLYD L R N  PFLD +N+
Sbjct: 10  PRQFLRQYPSIQPAVTSRIAKPCDVFINHRGIDTKRTVVTLLYDHLFRLNLHPFLDNKNM 69

Query: 72  KPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQL 131
           KPG+KLFD ++ AIR+CKVGV VFSPRYCESYFCLHELA+I+ES KKVIPIFCD+ PSQL
Sbjct: 70  KPGDKLFDNINSAIRKCKVGVTVFSPRYCESYFCLHELALIMESKKKVIPIFCDIKPSQL 129

Query: 132 RIKEDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRD 191
           R+  D     ED+RRF WALE+A    G+ F+S K   S++VT AS+IVI +LVE++   
Sbjct: 130 RVVNDGKCPMEDIRRFRWALEEAKYTVGLTFDSLKGNWSEVVTSASDIVIETLVELESEK 189

[Close]

BLAST of CmaCh04G009100 vs. TrEMBL
Match: B9HZY1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12380g PE=4 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 5.6e-57
Identity = 105/167 (62.87%), Postives = 130/167 (77.84%), Query Frame = 1


Query: 24  LQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAI 83
           L   + KPCDVFINHRG+DTK+TVA LLYD L R N  PFLD +N+KPG+KLFD ++ AI
Sbjct: 9   LANRVTKPCDVFINHRGIDTKRTVATLLYDHLSRLNLHPFLDNKNMKPGDKLFDNINSAI 68

Query: 84  RQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQLRIKEDDGYETEDLR 143
           R+CKVGV VFSPRYCESYFCLHELA+I+ES KKVIPIFCD+ PSQLR+  +     ED+R
Sbjct: 69  RKCKVGVTVFSPRYCESYFCLHELALIMESKKKVIPIFCDIKPSQLRVVNNGKCPMEDIR 128

Query: 144 RFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRDE 191
           RFNWALE+A    G+ F+S K   SD+VT AS+IVI +L+E++   +
Sbjct: 129 RFNWALEEAKYTVGLTFDSLKGNWSDVVTSASDIVIETLLEIESEKQ 175

[Close]

BLAST of CmaCh04G009100 vs. TrEMBL
Match: M5X142_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017913mg PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-55
Identity = 109/186 (58.60%), Postives = 140/186 (75.27%), Query Frame = 1


Query: 1   MNRVAAVAKITPRLFLAQLGSKQLQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNF 60
           M+R AA+      LFL Q    QL + + KPCDVF+NHRG+DTK+T+ +LLYD L   N 
Sbjct: 1   MHRSAAI-NFHRNLFLLQ-SQTQLAKRVTKPCDVFLNHRGIDTKRTIVSLLYDHLSLLNL 60

Query: 61  RPFLDYRNLKPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPI 120
           RPFLD R +KPG+KLFD++  AI+ CKVGVAVFSPRYC+SYFCLHELA+ +ES KKVIPI
Sbjct: 61  RPFLDNRTMKPGDKLFDKIDSAIKGCKVGVAVFSPRYCDSYFCLHELALFMESKKKVIPI 120

Query: 121 FCDVNPSQLRIKEDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVIS 180
           FCD+ PSQLR+ E+     E L +F  ALEQA    G+ ++SSK  L+D+VTRA+NIVI+
Sbjct: 121 FCDIKPSQLRVVENGQCPPEKLPKFRLALEQAKNTVGLTYDSSKGNLADVVTRAANIVIN 180

Query: 181 SLVEMD 187
           SL+E++
Sbjct: 181 SLIEIE 184

[Close]

BLAST of CmaCh04G009100 vs. TrEMBL
Match: A0A067JST6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20956 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-55
Identity = 107/191 (56.02%), Postives = 140/191 (73.30%), Query Frame = 1


Query: 1   MNRVAAVAKITPRLFLAQLGSKQLQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNF 60
           MNR ++      R FL+Q    Q+   + KPCDVFINHRG+DTK+TV +LLYD L R N 
Sbjct: 1   MNRSSSYIVKFQRQFLSQT---QMMNRVIKPCDVFINHRGIDTKRTVVSLLYDHLSRFNL 60

Query: 61  RPFLDYRNLKPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPI 120
            PFLD +N+KPG+KLF+ ++ AI+QC+VGV VFSPRYCESYFCLHELA+I+ES KKVIPI
Sbjct: 61  CPFLDNKNMKPGDKLFENINRAIKQCEVGVTVFSPRYCESYFCLHELALIMESKKKVIPI 120

Query: 121 FCDVNPSQLRIKEDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVIS 180
           FCD+ PSQLRI        E++ RFNWALE+A    G+ F+S K   S++VT AS+I+I 
Sbjct: 121 FCDIKPSQLRIVNKGLCTEEEIHRFNWALEEAKHTVGLTFDSLKGNWSEVVTSASDIIIK 180

Query: 181 SLVEMDGRDEQ 192
           SL+E++   ++
Sbjct: 181 SLIEIENEKQK 188

[Close]

BLAST of CmaCh04G009100 vs. TrEMBL
Match: V4ULS1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010354mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-54
Identity = 102/169 (60.36%), Postives = 132/169 (78.11%), Query Frame = 1


Query: 23  QLQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGA 82
           +L+    KPCDVFINHRG+DTK+ VA LLYD L R N RPFLD +N+KPG+KLFD ++ A
Sbjct: 12  RLRNQAIKPCDVFINHRGIDTKRKVATLLYDHLSRLNLRPFLDNKNMKPGDKLFDNINRA 71

Query: 83  IRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQLRIKEDDGYETEDL 142
           IR CKVGVAVFSP YC+SYFCLHELA+++E+ KKVIPIFCD+ PSQL + +D      +L
Sbjct: 72  IRNCKVGVAVFSPTYCQSYFCLHELALMMETKKKVIPIFCDIKPSQLLVIDDGKCSANEL 131

Query: 143 RRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRDEQ 192
           RRF+WALE+A    G+ F+S K   SDIVT AS+I+I SL+E+D ++++
Sbjct: 132 RRFSWALEEAKFTVGLTFDSLKGNWSDIVTSASDIIIRSLMEIDYKEQR 180

[Close]

BLAST of CmaCh04G009100 vs. TAIR10
Match: AT1G52900.1 (AT1G52900.1 Toll-Interleukin-Resistance (TIR) domain family protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-49
Identity = 96/186 (51.61%), Postives = 130/186 (69.89%), Query Frame = 1


Query: 9   KITPRLFLAQLGSKQLQRGIAKPC---DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLD 68
           ++  +LFL  L S       AKP    DVFINHRG DTK+ +A LLYD L   N RPFLD
Sbjct: 16  QLNNKLFLDLLSSSSS----AKPKILHDVFINHRGSDTKRNIATLLYDNLKSRNLRPFLD 75

Query: 69  YRNLKPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVN 128
            +N+KPG+KLFD ++ AI   KV V VFSP YC+SYFCLHELA+I+ES K+VIPIFCD+ 
Sbjct: 76  SKNMKPGDKLFDHINNAILTSKVAVTVFSPNYCDSYFCLHELALIMESRKRVIPIFCDIK 135

Query: 129 PSQLRIK-EDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVE 188
           PSQL +  E      ++++RF WAL++A  + G+ F+S K  LS++VT AS++++  LVE
Sbjct: 136 PSQLDVMIERVTCSDDEIQRFRWALQEAKDIVGLTFDSYKGNLSEVVTVASDVIVERLVE 195

Query: 189 MDGRDE 191
           ++ +DE
Sbjct: 196 LEAKDE 197

[Close]

BLAST of CmaCh04G009100 vs. TAIR10
Match: AT1G61105.1 (AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-46
Identity = 82/158 (51.90%), Postives = 116/158 (73.42%), Query Frame = 1


Query: 31  PCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGV 90
           PCD+FINHRG+DTKKT++ LLYD   R     FLD ++LKPG++LF E+  AI+ C VG+
Sbjct: 28  PCDIFINHRGIDTKKTISGLLYDCFTRQRLTAFLDSKSLKPGDRLFVEIDMAIKACGVGI 87

Query: 91  AVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQLRIKEDDGYETEDLRRFNWALE 150
           AVFSPRYC+SYFCLHELA+++++ K+VIPIFCDV PS+L +K+D      ++RRF  ALE
Sbjct: 88  AVFSPRYCDSYFCLHELALLVKNKKRVIPIFCDVKPSELCVKDDKTRPAAEIRRFQLALE 147

Query: 151 QANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGR 189
           +A    G+ F++S    S+ +  AS+ V  +L+E++ R
Sbjct: 148 EAKYTVGLTFDTSNGDWSEFLAMASDAVTKNLLEVEER 185

[Close]

BLAST of CmaCh04G009100 vs. TAIR10
Match: AT1G72950.1 (AT1G72950.1 Disease resistance protein (TIR-NBS class))

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 54/174 (31.03%), Postives = 84/174 (48.28%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF++ RG+DT+++  + LY  LIR N R F D + LK G ++  EL  AI   +  V V
Sbjct: 12  DVFLSFRGLDTRRSFISFLYKELIRRNIRTFKDDKELKNGRRITPELIRAIEGSRFAVVV 71

Query: 93  FSPRYCESYFCLHELAMIIE----SNKKVIPIFCDVNPSQLR---------IKEDDGYET 152
            S  Y  S +CL EL  I++     + KV+PIF  V+P  +R          K+ +G E 
Sbjct: 72  VSVNYAASRWCLEELVKIMDFENMGSLKVMPIFYGVDPCHVRRQIGEVAEQFKKHEGRED 131

Query: 153 -EDLRRFNWALEQANQLEG---IKFNSSKQTLSDIVTRASNIVISSLVEMDGRD 190
            E +  +  AL     + G    K+    + + +I  R S  ++      +G D
Sbjct: 132 HEKVLSWRQALTNLASISGDCSWKWEDDSKMVEEITDRISKELMIDTTRSNGSD 185

[Close]

BLAST of CmaCh04G009100 vs. TAIR10
Match: AT1G72920.1 (AT1G72920.1 Toll-Interleukin-Resistance (TIR) domain family protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF++ RG+DT++   + LY  L+R   R F D + L+ G ++  EL  AI + K  V V
Sbjct: 10  DVFLSFRGLDTRRNFISFLYKELVRRKIRTFKDDKELENGRRISPELKRAIEESKFAVVV 69

Query: 93  FSPRYCESYFCLHELAMIIESNKK----VIPIFCDVNPSQLR--------------IKED 152
            S  Y  S +CL EL  I++   K    V+PIF  V+P  LR               +E+
Sbjct: 70  VSVNYAASPWCLDELVKIMDFENKGSITVMPIFYGVDPCHLRRQIGDVAEQFKKHEAREE 129

Query: 153 DGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRD 190
           D  +    RR   +L   +    +K+      + +I  + S  +++     +GRD
Sbjct: 130 DHEKVASWRRALTSLASISGECSLKWEDEANLVDEIADKISKNLMTVTTISNGRD 184

[Close]

BLAST of CmaCh04G009100 vs. TAIR10
Match: AT1G17615.1 (AT1G17615.1 Disease resistance protein (TIR-NBS class))

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 1


Query: 33  DVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAV 92
           DVF++ RG DT++T  + LY  LI    R F D   L+ G ++  +L  AI   K+ V +
Sbjct: 16  DVFLSFRGKDTRRTFISFLYKELIEMGIRTFKDDVELQSGRRIASDLLAAIENSKIAVVI 75

Query: 93  FSPRYCESYFCLHELAMIIESNKK----VIPIFCDVNPSQLR 131
            S  Y  S +CL EL MI++  KK    V+PIF +V P+ +R
Sbjct: 76  ISKNYSASPWCLQELVMIMDVEKKGSIIVMPIFYNVEPAHVR 117

[Close]

BLAST of CmaCh04G009100 vs. NCBI nr
Match: gi|778676301|ref|XP_011650563.1| (PREDICTED: vesicle-associated protein 1-4 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 135/188 (71.81%), Postives = 162/188 (86.17%), Query Frame = 1


Query: 1   MNRVAA--VAKITPRLFLAQLGSKQLQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRG 60
           MNRVA   V  ITPR FLA LG K+++    KPCDVFINHRGVDTKKTVAALLYDRL+R 
Sbjct: 1   MNRVAVSGVGNITPRQFLAHLGKKEMKGMTLKPCDVFINHRGVDTKKTVAALLYDRLVRV 60

Query: 61  NFRPFLDYRNLKPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVI 120
           N RPFLDY+N+KPG+KLFDE+HGAIR+CKVGVAVFSPRYCESYFCLHELAM+ ESNKKVI
Sbjct: 61  NLRPFLDYKNMKPGDKLFDEIHGAIRKCKVGVAVFSPRYCESYFCLHELAMMFESNKKVI 120

Query: 121 PIFCDVNPSQLRIKEDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIV 180
           PIFCD+  SQLRI +   YE ++LRRF+WAL++A   +G+KF+SS++TLS++VT+ASNI+
Sbjct: 121 PIFCDIKASQLRIDDHHDYEIDELRRFDWALQKARSFDGLKFDSSRETLSEVVTKASNII 180

Query: 181 ISSLVEMD 187
           I SL+EMD
Sbjct: 181 IRSLMEMD 188

[Close]

BLAST of CmaCh04G009100 vs. NCBI nr
Match: gi|659102705|ref|XP_008452271.1| (PREDICTED: toll/interleukin-1 receptor-like protein [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 2.3e-72
Identity = 127/168 (75.60%), Postives = 152/168 (90.48%), Query Frame = 1


Query: 19  LGSKQLQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEKLFDE 78
           +G K+++  I KPCDVFINHRGVDTKKTVAALLYDRL+R   RPFLDY+NL+PGEKLFDE
Sbjct: 1   MGKKEMKGMILKPCDVFINHRGVDTKKTVAALLYDRLVRVRLRPFLDYKNLRPGEKLFDE 60

Query: 79  LHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQLRIKEDDGYE 138
           +HGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCD+  SQLRI++  GYE
Sbjct: 61  IHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDIKASQLRIEDHHGYE 120

Query: 139 TEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMD 187
           T+++RRFNWAL+QA   +G+KF+SS +TLS++VT+ASNI++ SL+EMD
Sbjct: 121 TDEVRRFNWALQQAKSFDGLKFDSSTETLSEVVTKASNIIMRSLIEMD 168

[Close]

BLAST of CmaCh04G009100 vs. NCBI nr
Match: gi|566154092|ref|XP_006370301.1| (hypothetical protein POPTR_0001s41430g [Populus trichocarpa])

HSP 1 Score: 233.4 bits (594), Expect = 3.3e-58
Identity = 112/181 (61.88%), Postives = 136/181 (75.14%), Query Frame = 1


Query: 12  PRLFLAQLGSKQ--LQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNL 71
           PR FL Q  S Q  +   IAKPCDVFINHRG+DTK+TV  LLYD L R N  PFLD +N+
Sbjct: 10  PRQFLRQYPSIQPAVTSRIAKPCDVFINHRGIDTKRTVVTLLYDHLFRLNLHPFLDNKNM 69

Query: 72  KPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQL 131
           KPG+KLFD ++ AIR+CKVGV VFSPRYCESYFCLHELA+I+ES KKVIPIFCD+ PSQL
Sbjct: 70  KPGDKLFDNINSAIRKCKVGVTVFSPRYCESYFCLHELALIMESKKKVIPIFCDIKPSQL 129

Query: 132 RIKEDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRD 191
           R+  D     ED+RRF WALE+A    G+ F+S K   S++VT AS+IVI +LVE++   
Sbjct: 130 RVVNDGKCPMEDIRRFRWALEEAKYTVGLTFDSLKGNWSEVVTSASDIVIETLVELESEK 189

[Close]

BLAST of CmaCh04G009100 vs. NCBI nr
Match: gi|743898439|ref|XP_011042510.1| (PREDICTED: vesicle-associated protein 1-4-like [Populus euphratica])

HSP 1 Score: 231.9 bits (590), Expect = 9.5e-58
Identity = 110/181 (60.77%), Postives = 136/181 (75.14%), Query Frame = 1


Query: 12  PRLFLAQLGSKQ--LQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNL 71
           PR F  Q  S Q  +   +AKPCDVFINHRG+DTK+TV  LLYD L R N  PFLD +N+
Sbjct: 10  PRQFFRQYPSIQPAVTSRVAKPCDVFINHRGIDTKRTVVTLLYDHLFRLNLHPFLDNKNM 69

Query: 72  KPGEKLFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQL 131
           KPG+KLFD ++ AIR+CKVGV VFSPRYCESYFCLHELA+I+ES KKVIPIFCD+ PSQL
Sbjct: 70  KPGDKLFDNINSAIRKCKVGVTVFSPRYCESYFCLHELALIMESKKKVIPIFCDIKPSQL 129

Query: 132 RIKEDDGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRD 191
           R+ +D     ED+RRF WALE+A    G+ F+S K   S++VT AS+IVI +LVE++   
Sbjct: 130 RVVDDGKCPMEDIRRFRWALEEAKYTVGLTFDSLKGNWSEVVTSASDIVIETLVEIESEK 189

[Close]

BLAST of CmaCh04G009100 vs. NCBI nr
Match: gi|743853653|ref|XP_011029576.1| (PREDICTED: uncharacterized protein LOC105129282 [Populus euphratica])

HSP 1 Score: 231.9 bits (590), Expect = 9.5e-58
Identity = 106/176 (60.23%), Postives = 134/176 (76.14%), Query Frame = 1


Query: 15  FLAQLGSKQLQRGIAKPCDVFINHRGVDTKKTVAALLYDRLIRGNFRPFLDYRNLKPGEK 74
           FL Q    Q+   + KPCD+FINHRG+DTK+TVA LLYD L R N  PFLD +N+KPG+K
Sbjct: 7   FLRQCHPTQIANRVTKPCDIFINHRGIDTKRTVATLLYDHLSRLNLHPFLDNKNMKPGDK 66

Query: 75  LFDELHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDVNPSQLRIKED 134
           LFD ++ AIR+CKVGV VFSPRYCESYFCLHELA+I+ES KKVIPIFCD+ PSQLR+  +
Sbjct: 67  LFDNINSAIRKCKVGVTVFSPRYCESYFCLHELALIMESRKKVIPIFCDIKPSQLRVVNN 126

Query: 135 DGYETEDLRRFNWALEQANQLEGIKFNSSKQTLSDIVTRASNIVISSLVEMDGRDE 191
                ED+RRFNWA+E+A    G+ F+S K   SD+VT AS+IVI +L+E++   +
Sbjct: 127 AKCPMEDIRRFNWAIEEAKYTVGLTFDSLKGNWSDVVTSASDIVIKTLLEIESEKQ 182

The following BLAST results are available for this feature:

BLAST of CmaCh04G009100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TMVRN_NICGU	9.9e-15	32.78	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	[more]
TIR_ARATH	4.6e-12	37.25	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana GN=TIR PE=1 SV=...	[more]
RPP5_ARATH	2.5e-10	34.31	Disease resistance protein RPP5 OS=Arabidopsis thaliana GN=RPP5 PE=1 SV=1	[more]
RPP4_ARATH	9.6e-10	36.27	Disease resistance protein RPP4 OS=Arabidopsis thaliana GN=RPP4 PE=1 SV=1	[more]
VICTR_ARATH	1.6e-09	31.21	Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response OS=Arabidopsis thal...	[more]

BLAST of CmaCh04G009100 vs. TrEMBL


Match Name	E-value	Identity	Description
B9N1K6_POPTR	2.3e-58	61.88	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41430g PE=4 SV=1	[more]
B9HZY1_POPTR	5.6e-57	62.87	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12380g PE=4 SV=2	[more]
M5X142_PRUPE	1.1e-55	58.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017913mg PE=4 SV=1	[more]
A0A067JST6_JATCU	1.4e-55	56.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20956 PE=4 SV=1	[more]
V4ULS1_9ROSI	1.5e-54	60.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010354mg PE=4 SV=1	[more]

BLAST of CmaCh04G009100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G52900.1	1.0e-49	51.61	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G61105.1	1.0e-46	51.90	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G72950.1	2.8e-15	31.03	Disease resistance protein (TIR-NBS class)	[more]
AT1G72920.1	2.8e-15	29.14	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G17615.1	3.6e-15	39.22	Disease resistance protein (TIR-NBS class)	[more]

BLAST of CmaCh04G009100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676301\|ref\|XP_011650563.1\|	1.1e-74	71.81	PREDICTED: vesicle-associated protein 1-4 [Cucumis sativus]	[more]
gi\|659102705\|ref\|XP_008452271.1\|	2.3e-72	75.60	PREDICTED: toll/interleukin-1 receptor-like protein [Cucumis melo]	[more]
gi\|566154092\|ref\|XP_006370301.1\|	3.3e-58	61.88	hypothetical protein POPTR_0001s41430g [Populus trichocarpa]	[more]
gi\|743898439\|ref\|XP_011042510.1\|	9.5e-58	60.77	PREDICTED: vesicle-associated protein 1-4-like [Populus euphratica]	[more]
gi\|743853653\|ref\|XP_011029576.1\|	9.5e-58	60.23	PREDICTED: uncharacterized protein LOC105129282 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000157	TIR_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G009100.1	CmaCh04G009100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	GENE3D	G3DSA:3.40.50.10140		coord: 31..130 score: 2.8
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 33..130 score: 8.3
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 31..177 score: 7.3
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROFILE	PS50104	TIR	coord: 30..134 score: 15
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	unknown	SSF52200	Toll/Interleukin receptor TIR domain	coord: 30..154 score: 5.1
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 9..191 score: 7.2
None	No IPR available	PANTHER	PTHR31008:SF2	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN-CONTAINING PROTEIN	coord: 9..191 score: 7.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G009100	Cucsa.074640	Cucumber (Gy14) v1	cgycmaB0122
CmaCh04G009100	Cla011771	Watermelon (97103) v1	cmawmB680
CmaCh04G009100	Csa3G102820	Cucumber (Chinese Long) v2	cmacuB702
CmaCh04G009100	MELO3C016529	Melon (DHL92) v3.5.1	cmameB689
CmaCh04G009100	ClCG10G006820	Watermelon (Charleston Gray)	cmawcgB614
CmaCh04G009100	CSPI03G06050	Wild cucumber (PI 183967)	cmacpiB710
CmaCh04G009100	CmoCh16G008500	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G009100	Lsi05G007070	Bottle gourd (USVL1VR-Ls)	cmalsiB691
CmaCh04G009100	Cp4.1LG14g00280	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G009100	MELO3C016529.2	Melon (DHL92) v3.6.1	cmamedB778
CmaCh04G009100	CsaV3_3G006150	Cucumber (Chinese Long) v3	cmacucB0837
CmaCh04G009100	Cla97C10G190680	Watermelon (97103) v2	cmawmbB718
CmaCh04G009100	Bhi11G000620	Wax gourd	cmawgoB0817
CmaCh04G009100	CsGy3G006140	Cucumber (Gy14) v2	cgybcmaB416
CmaCh04G009100	Carg00030	Silver-seed gourd	carcmaB0948
CmaCh04G009100	Carg21084	Silver-seed gourd	carcmaB0662

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G009100	CmaCh16G007890	Cucurbita maxima (Rimu)	cmacmaB350

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G009100	Wax gourd	cmawgoB0826
CmaCh04G009100	Cucurbita maxima (Rimu)	cmacmaB064
CmaCh04G009100	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G009100	Watermelon (97103) v1	cmawmB659
CmaCh04G009100	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G009100	Bottle gourd (USVL1VR-Ls)	cmalsiB685