Cla011771 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla011771
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Tir-nbs-lrr resistance protein (Fragment) (AHRD V1 ***- B9GMS9_POPTR); contains Interpro domain(s) IPR000157 Toll-Interleukin receptor
Location	Chr7 : 10380336 .. 10382885 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGTGTAGCCAGCAGCAGTGTTGCGATCATTACACCGAGGCAGTTTCTAGCTCACCTTGGGAAGAAGGAGATGAAGGGTATTAGTGTGAAGCCTTGTGATGTGTTCATAAACCACAGAGGCGTTGACACCAAGAAGACGGTGGCGGCGTTGCTGTATGACCGGCTCATTCGGGTGAAGCTGCGGCCGTTTCTGGACTACAAGAATTTGAAGCCTGGAGAGAAGCTGTTCGATGAAATCCATGGTGCCATCAGGCACTGTAAAGTTGGTGTTGCTGTGTTTTCCCCTCATTATTGTGAGTCTTATTTTTGCCTTCATGAGTTGGCTATGATGATCGAGTCTAACAAGAAGGTATGTTACATTTCTCTATTATTATTATTTTGGGAAATTATTGTTAGATAACTTATTTTAAATATCAAAATTGTTGAAAATATTTACAAATAATAATAAAATATCATAATTTATTTGCGATAGATTACTATCTATATCTATTGTGTCATGATAAATACAAATAGTAGTCTATCACGATCTATAGATAGACAGTAAAACTTTGTTATATTTGTAAATATTTTGGTTGATTTTTCTGTACTCGAAAATTAACCCTGATAATTACTAGAGAAATTATCTTAAATAACAAAACTGTTGAAAATATTTACAACTAATAGCAAAATACACGGTCTATCGCAAATAGACAGTAAAATTTTTTATTCCTTTTGCTATATTTGAAAAGAGCCATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTGATAGGTTTGATATATAGTTTATCATTTCAATATATTCAATCTATCATAATTTTTAGGAACAACATTATTTTGTTCCTTTGAACTTTTGATTGCGTTAATTTAGATCTTAAAACTTCACAAGTCTATGAATTTTTAATGTTTAAATTGATATTGACTTTGAATTTTAAGTATAAAATCATATTTGTGAAAATTTAATTTATATGCGCCACAGTAATACACCCATATTTTGTTATCAAACTTACAAAAGGGGTTTGTGTTTAGGAAAAAGAATCAATTTTCATCATCATTTTAGAATTTATTGAATGCAAAAGAGAACTCGTAAATGATGTTATAAACATTTTAAAGTTGGGTATAATATATATGGATTATTTTTGTCTTTTTTTTTTTTTCTCTAAATGATTTTGCCATTCTACTGAAAGTTTAATTTTTTTAATAGAAAATAAAATTTTGAAAAAGTCTATTTAATCACCCGTTAGTTTAAAAAAATTGTGCTAGTTTTCTCAATTATTTGCAACAATCTTCATCATTTTAAACAAATATTTGCACAAATTCTAAATATGAAAATAAATTTCTAAAAACTAAGCTTGGTTGGATAACAATTTCATTTTTTTTTTCTACTTTTAATATTTATGCTTTTTTTCTCTCAATTTTTTTATTATGATCTAAATTTGAATTCTTAGTTAAATTTTAAACTATATATACATATAACTCTAGTTTTCAAAACTTGACTTCGAATTTGAAATTTTGATGAGAAGTGAATAACCAAACAAAATCAAATCTAAGTAATTATCAAACTAGGTTGTTACTACCTTTTATTTTAGTTTATGAAGACACATGCATTACTCCCTTAAAAAGCCCTTATTTTGAGAACAATATACATTCACAAGGTTGTGGTTTGAGAATTCTTATGAATTATAGTAATTGGAGAATTTCAGGGGAAAAAAAAAGAAGGTTATTTAGGGTGTCAGACTTTTCTTTTTCTACCTTTATAAAAATTCTTTGGATTTGTATTTATAGAATACCGTTCCAATCTTAGCAAATTTCAGAAAGAGGGAGAAAAACAAAAACAACTTCTAGAATTTTAATAAAACTTTTGAAAGTGTTAAAATTACAAAGAAAAATTCTAGTAACTATAAATACTAGAAAAAAAGAAAAGAAAAAAAAAATTGTCGATAGAAACATATATGAGTCAACTTACCACCATCATGGGTTGACTTAGTGGTAGTGAAAATATCTTAAAAAGCTCAAAGGGACAAGTGGTCATAGGTTACATCTATGATGGTCACCTACCTAGGATTTAATATCTACGAGTTTCTTTGACACCCAAATGTTGTAGAGTCAGACGGATTGTCCCGTGAAATTAGTCAAGGTGCACGTAGATTGACTCGAACACTCACGAATATAAAAAAAACAAAAATGAGTCCACTTACCTATCTTCGAATCTCTCATCATCCGAACTTAAAAATAAACGGGCAATAAACCACACTAATGCATGCATGCCAACATTATTCTGACAATAGTCTTTACCAACTTTACAAACAGTGAAAAACTATCCTGAAAATATATGAATGTAATTTAATATTATTAATTAATTTTCCATTCTTCAACAGGTCATTCCTATCTTTTGCGATATAAAAGCATCTCAACTTCGCATAGAGGATAATCATGAATATGAAATTGATGAGCTTAGGAGGTTCAATTGGGCTCTTGAAGAAGCTAAACGGTTTAAGGGCCTCAAATTTAATTCCTCAAAAGAGTAA

mRNA sequence

ATGAACCGTGTAGCCAGCAGCAGTGTTGCGATCATTACACCGAGGCAGTTTCTAGCTCACCTTGGGAAGAAGGAGATGAAGGGTATTAGTGTGAAGCCTTGTGATGTGTTCATAAACCACAGAGGCGTTGACACCAAGAAGACGGTGGCGGCGTTGCTGTATGACCGGCTCATTCGGGTGAAGCTGCGGCCGTTTCTGGACTACAAGAATTTGAAGCCTGGAGAGAAGCTGTTCGATGAAATCCATGGTGCCATCAGGCACTGTAAAGTTGGTGTTGCTGTGTTTTCCCCTCATTATTGTGAGTCTTATTTTTGCCTTCATGAGTTGGCTATGATGATCGAGTCTAACAAGAAGGTCATTCCTATCTTTTGCGATATAAAAGCATCTCAACTTCGCATAGAGGATAATCATGAATATGAAATTGATGAGCTTAGGAGGTTCAATTGGGCTCTTGAAGAAGCTAAACGGTTTAAGGGCCTCAAATTTAATTCCTCAAAAGAGTAA

Coding sequence (CDS)

ATGAACCGTGTAGCCAGCAGCAGTGTTGCGATCATTACACCGAGGCAGTTTCTAGCTCACCTTGGGAAGAAGGAGATGAAGGGTATTAGTGTGAAGCCTTGTGATGTGTTCATAAACCACAGAGGCGTTGACACCAAGAAGACGGTGGCGGCGTTGCTGTATGACCGGCTCATTCGGGTGAAGCTGCGGCCGTTTCTGGACTACAAGAATTTGAAGCCTGGAGAGAAGCTGTTCGATGAAATCCATGGTGCCATCAGGCACTGTAAAGTTGGTGTTGCTGTGTTTTCCCCTCATTATTGTGAGTCTTATTTTTGCCTTCATGAGTTGGCTATGATGATCGAGTCTAACAAGAAGGTCATTCCTATCTTTTGCGATATAAAAGCATCTCAACTTCGCATAGAGGATAATCATGAATATGAAATTGATGAGCTTAGGAGGTTCAATTGGGCTCTTGAAGAAGCTAAACGGTTTAAGGGCCTCAAATTTAATTCCTCAAAAGAGTAA

Protein sequence

MNRVASSSVAIITPRQFLAHLGKKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEKLFDEIHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIKASQLRIEDNHEYEIDELRRFNWALEEAKRFKGLKFNSSKE

Homology

[Close]

BLAST of Cla011771 vs. Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-12
Identity = 48/148 (32.43%), Postives = 74/148 (50.00%), Query Frame = 1


Query: 35  DVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEKLFDEIHGAIRHCKVGVAV 94
           DVF++ RG DT+KT  + LY+ L    ++ F D K L+ G  +  E+  AI   +  + V
Sbjct: 13  DVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIVV 72

Query: 95  FSPHYCESYFCLHELAMMIESNKK----VIPIFCDIKASQLR------------IEDNHE 154
           FS +Y  S +CL+EL  ++E   +    VIPIF D+  S +R             E  ++
Sbjct: 73  FSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYK 132

Query: 155 YEIDELRRFNWALEEAKRFKGLKFNSSK 167
            +++ ++R+  AL EA   KG   N  K
Sbjct: 133 DDVEGIQRWRIALNEAANLKGSCDNRDK 160

[Close]

BLAST of Cla011771 vs. Swiss-Prot
Match: TIR_ARATH (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana GN=TIR PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 1


Query: 35  DVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEKLFDEIHGAIRHCKVGVAV 94
           DVF++ RG DT+    + LY  L+R  +R F D K L+ G++   E+   I   +  V V
Sbjct: 10  DVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVV 69

Query: 95  FSPHYCESYFCLHELAMMIESNKK----VIPIFCDIKASQLR 133
            S +Y  S +CL EL  +++  KK    V+PIF  ++ + +R
Sbjct: 70  VSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVR 111

[Close]

BLAST of Cla011771 vs. Swiss-Prot
Match: CSA1_ARATH (Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.4e-06
Identity = 36/98 (36.73%), Postives = 50/98 (51.02%), Query Frame = 1


Query: 36  VFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEK--LFDEIHGAIRHCKVGVA 95
           VFIN RGV+ +K   + L   L R  +  F+D       E   L + I G+    ++ +A
Sbjct: 19  VFINFRGVELRKNFVSHLEKGLKRKGINAFIDTDEEMGQELSVLLERIEGS----RIALA 78

Query: 96  VFSPHYCESYFCLHELAMMIESNKK----VIPIFCDIK 128
           +FSP Y ES +CL ELA M E  ++    VIPIF  ++
Sbjct: 79  IFSPRYTESKWCLKELAKMKERTEQKELVVIPIFYKVQ 112

[Close]

BLAST of Cla011771 vs. TrEMBL
Match: A0A0A0L2L7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G102820 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-54
Identity = 105/119 (88.24%), Postives = 111/119 (93.28%), Query Frame = 1


Query: 1   MNRVASSSVAIITPRQFLAHLGKKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRV 60
           MNRVA S V  ITPRQFLAHLGKKEMKG+++KPCDVFINHRGVDTKKTVAALLYDRL+RV
Sbjct: 1   MNRVAVSGVGNITPRQFLAHLGKKEMKGMTLKPCDVFINHRGVDTKKTVAALLYDRLVRV 60

Query: 61  KLRPFLDYKNLKPGEKLFDEIHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKV 120
            LRPFLDYKN+KPG+KLFDEIHGAIR CKVGVAVFSP YCESYFCLHELAMM ESNKKV
Sbjct: 61  NLRPFLDYKNMKPGDKLFDEIHGAIRKCKVGVAVFSPRYCESYFCLHELAMMFESNKKV 119

[Close]

BLAST of Cla011771 vs. TrEMBL
Match: B9HZY1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12380g PE=4 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 3.4e-50
Identity = 96/135 (71.11%), Postives = 113/135 (83.70%), Query Frame = 1


Query: 32  KPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEKLFDEIHGAIRHCKVG 91
           KPCDVFINHRG+DTK+TVA LLYD L R+ L PFLD KN+KPG+KLFD I+ AIR CKVG
Sbjct: 15  KPCDVFINHRGIDTKRTVATLLYDHLSRLNLHPFLDNKNMKPGDKLFDNINSAIRKCKVG 74

Query: 92  VAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIKASQLRIEDNHEYEIDELRRFNWAL 151
           V VFSP YCESYFCLHELA+++ES KKVIPIFCDIK SQLR+ +N +  ++++RRFNWAL
Sbjct: 75  VTVFSPRYCESYFCLHELALIMESKKKVIPIFCDIKPSQLRVVNNGKCPMEDIRRFNWAL 134

Query: 152 EEAKRFKGLKFNSSK 167
           EEAK   GL F+S K
Sbjct: 135 EEAKYTVGLTFDSLK 149

[Close]

BLAST of Cla011771 vs. TrEMBL
Match: V4ULS1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010354mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 96/144 (66.67%), Postives = 118/144 (81.94%), Query Frame = 1


Query: 23  KKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEKLFDEIH 82
           +  ++  ++KPCDVFINHRG+DTK+ VA LLYD L R+ LRPFLD KN+KPG+KLFD I+
Sbjct: 10  QNRLRNQAIKPCDVFINHRGIDTKRKVATLLYDHLSRLNLRPFLDNKNMKPGDKLFDNIN 69

Query: 83  GAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIKASQLRIEDNHEYEID 142
            AIR+CKVGVAVFSP YC+SYFCLHELA+M+E+ KKVIPIFCDIK SQL + D+ +   +
Sbjct: 70  RAIRNCKVGVAVFSPTYCQSYFCLHELALMMETKKKVIPIFCDIKPSQLLVIDDGKCSAN 129

Query: 143 ELRRFNWALEEAKRFKGLKFNSSK 167
           ELRRF+WALEEAK   GL F+S K
Sbjct: 130 ELRRFSWALEEAKFTVGLTFDSLK 153

[Close]

BLAST of Cla011771 vs. TrEMBL
Match: A0A067GFD5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044205mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 96/144 (66.67%), Postives = 118/144 (81.94%), Query Frame = 1


Query: 23  KKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEKLFDEIH 82
           +  ++  ++KPCDVFINHRG+DTK+ VA LLYD L R+ LRPFLD KN+KPG+KLFD I+
Sbjct: 10  QNRLRNQAIKPCDVFINHRGIDTKRKVATLLYDHLSRLNLRPFLDNKNMKPGDKLFDNIN 69

Query: 83  GAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIKASQLRIEDNHEYEID 142
            AIR+CKVGVAVFSP YC+SYFCLHELA+M+E+ KKVIPIFCDIK SQL + D+ +   +
Sbjct: 70  RAIRNCKVGVAVFSPTYCQSYFCLHELALMMETKKKVIPIFCDIKPSQLLVIDDGKCSAN 129

Query: 143 ELRRFNWALEEAKRFKGLKFNSSK 167
           ELRRF+WALEEAK   GL F+S K
Sbjct: 130 ELRRFSWALEEAKFTVGLTFDSLK 153

[Close]

BLAST of Cla011771 vs. TrEMBL
Match: B9N1K6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41430g PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-49
Identity = 99/155 (63.87%), Postives = 118/155 (76.13%), Query Frame = 1


Query: 14  PRQFLAHLGKKEMKGIS--VKPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNL 73
           PRQFL      +    S   KPCDVFINHRG+DTK+TV  LLYD L R+ L PFLD KN+
Sbjct: 10  PRQFLRQYPSIQPAVTSRIAKPCDVFINHRGIDTKRTVVTLLYDHLFRLNLHPFLDNKNM 69

Query: 74  KPGEKLFDEIHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIKASQL 133
           KPG+KLFD I+ AIR CKVGV VFSP YCESYFCLHELA+++ES KKVIPIFCDIK SQL
Sbjct: 70  KPGDKLFDNINSAIRKCKVGVTVFSPRYCESYFCLHELALIMESKKKVIPIFCDIKPSQL 129

Query: 134 RIEDNHEYEIDELRRFNWALEEAKRFKGLKFNSSK 167
           R+ ++ +  ++++RRF WALEEAK   GL F+S K
Sbjct: 130 RVVNDGKCPMEDIRRFRWALEEAKYTVGLTFDSLK 164

[Close]

BLAST of Cla011771 vs. NCBI nr
Match: gi|778676301|ref|XP_011650563.1| (PREDICTED: vesicle-associated protein 1-4 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78
Identity = 142/167 (85.03%), Postives = 157/167 (94.01%), Query Frame = 1


Query: 1   MNRVASSSVAIITPRQFLAHLGKKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRV 60
           MNRVA S V  ITPRQFLAHLGKKEMKG+++KPCDVFINHRGVDTKKTVAALLYDRL+RV
Sbjct: 1   MNRVAVSGVGNITPRQFLAHLGKKEMKGMTLKPCDVFINHRGVDTKKTVAALLYDRLVRV 60

Query: 61  KLRPFLDYKNLKPGEKLFDEIHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVI 120
            LRPFLDYKN+KPG+KLFDEIHGAIR CKVGVAVFSP YCESYFCLHELAMM ESNKKVI
Sbjct: 61  NLRPFLDYKNMKPGDKLFDEIHGAIRKCKVGVAVFSPRYCESYFCLHELAMMFESNKKVI 120

Query: 121 PIFCDIKASQLRIEDNHEYEIDELRRFNWALEEAKRFKGLKFNSSKE 168
           PIFCDIKASQLRI+D+H+YEIDELRRF+WAL++A+ F GLKF+SS+E
Sbjct: 121 PIFCDIKASQLRIDDHHDYEIDELRRFDWALQKARSFDGLKFDSSRE 167

[Close]

BLAST of Cla011771 vs. NCBI nr
Match: gi|659102705|ref|XP_008452271.1| (PREDICTED: toll/interleukin-1 receptor-like protein [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 2.1e-69
Identity = 127/147 (86.39%), Postives = 139/147 (94.56%), Query Frame = 1


Query: 21  LGKKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGEKLFDE 80
           +GKKEMKG+ +KPCDVFINHRGVDTKKTVAALLYDRL+RV+LRPFLDYKNL+PGEKLFDE
Sbjct: 1   MGKKEMKGMILKPCDVFINHRGVDTKKTVAALLYDRLVRVRLRPFLDYKNLRPGEKLFDE 60

Query: 81  IHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIKASQLRIEDNHEYE 140
           IHGAIR CKVGVAVFSP YCESYFCLHELAM+IESNKKVIPIFCDIKASQLRIED+H YE
Sbjct: 61  IHGAIRQCKVGVAVFSPRYCESYFCLHELAMIIESNKKVIPIFCDIKASQLRIEDHHGYE 120

Query: 141 IDELRRFNWALEEAKRFKGLKFNSSKE 168
            DE+RRFNWAL++AK F GLKF+SS E
Sbjct: 121 TDEVRRFNWALQQAKSFDGLKFDSSTE 147

[Close]

BLAST of Cla011771 vs. NCBI nr
Match: gi|700201092|gb|KGN56225.1| (hypothetical protein Csa_3G102820 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-54
Identity = 105/119 (88.24%), Postives = 111/119 (93.28%), Query Frame = 1


Query: 1   MNRVASSSVAIITPRQFLAHLGKKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRV 60
           MNRVA S V  ITPRQFLAHLGKKEMKG+++KPCDVFINHRGVDTKKTVAALLYDRL+RV
Sbjct: 1   MNRVAVSGVGNITPRQFLAHLGKKEMKGMTLKPCDVFINHRGVDTKKTVAALLYDRLVRV 60

Query: 61  KLRPFLDYKNLKPGEKLFDEIHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKV 120
            LRPFLDYKN+KPG+KLFDEIHGAIR CKVGVAVFSP YCESYFCLHELAMM ESNKKV
Sbjct: 61  NLRPFLDYKNMKPGDKLFDEIHGAIRKCKVGVAVFSPRYCESYFCLHELAMMFESNKKV 119

[Close]

BLAST of Cla011771 vs. NCBI nr
Match: gi|470113788|ref|XP_004293102.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A5 [Fragaria vesca subsp. vesca])

HSP 1 Score: 209.5 bits (532), Expect = 4.4e-51
Identity = 99/159 (62.26%), Postives = 123/159 (77.36%), Query Frame = 1


Query: 8   SVAIITPRQFLAHLGKKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLD 67
           S A    R   +H  + ++     KPCDVF+NHRG+DTK+T+ +LLYD L R+ LRPFLD
Sbjct: 4   STATSFQRYLFSHQNQIQLAKHVTKPCDVFLNHRGIDTKRTIVSLLYDHLSRLNLRPFLD 63

Query: 68  YKNLKPGEKLFDEIHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIK 127
            KN+KPG+KLFD+I  AIR CKVGVAVFSP YC+SYFCLHELAM +ESNKKVIPIFCDIK
Sbjct: 64  NKNMKPGDKLFDKIDSAIRSCKVGVAVFSPRYCDSYFCLHELAMFMESNKKVIPIFCDIK 123

Query: 128 ASQLRIEDNHEYEIDELRRFNWALEEAKRFKGLKFNSSK 167
            SQLR+ DN + ++++LRRF  ALE+A+   GL FNSS+
Sbjct: 124 PSQLRVVDNGQCDVEKLRRFRSALEQARSTAGLTFNSSE 162

[Close]

BLAST of Cla011771 vs. NCBI nr
Match: gi|743853653|ref|XP_011029576.1| (PREDICTED: uncharacterized protein LOC105129282 [Populus euphratica])

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 97/151 (64.24%), Postives = 118/151 (78.15%), Query Frame = 1


Query: 16  QFLAHLGKKEMKGISVKPCDVFINHRGVDTKKTVAALLYDRLIRVKLRPFLDYKNLKPGE 75
           QFL      ++     KPCD+FINHRG+DTK+TVA LLYD L R+ L PFLD KN+KPG+
Sbjct: 6   QFLRQCHPTQIANRVTKPCDIFINHRGIDTKRTVATLLYDHLSRLNLHPFLDNKNMKPGD 65

Query: 76  KLFDEIHGAIRHCKVGVAVFSPHYCESYFCLHELAMMIESNKKVIPIFCDIKASQLRIED 135
           KLFD I+ AIR CKVGV VFSP YCESYFCLHELA+++ES KKVIPIFCDIK SQLR+ +
Sbjct: 66  KLFDNINSAIRKCKVGVTVFSPRYCESYFCLHELALIMESRKKVIPIFCDIKPSQLRVVN 125

Query: 136 NHEYEIDELRRFNWALEEAKRFKGLKFNSSK 167
           N +  ++++RRFNWA+EEAK   GL F+S K
Sbjct: 126 NAKCPMEDIRRFNWAIEEAKYTVGLTFDSLK 156

The following BLAST results are available for this feature:

BLAST of Cla011771 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TMVRN_NICGU	4.0e-12	32.43	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	[more]
TIR_ARATH	1.1e-09	34.31	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana GN=TIR PE=1 SV=...	[more]
CSA1_ARATH	7.4e-06	36.73	Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1	[more]

BLAST of Cla011771 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2L7_CUCSA	1.3e-54	88.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G102820 PE=4 SV=1	[more]
B9HZY1_POPTR	3.4e-50	71.11	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12380g PE=4 SV=2	[more]
V4ULS1_9ROSI	1.7e-49	66.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010354mg PE=4 SV=1	[more]
A0A067GFD5_CITSI	1.7e-49	66.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044205mg PE=4 SV=1	[more]
B9N1K6_POPTR	2.2e-49	63.87	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41430g PE=4 SV=1	[more]

BLAST of Cla011771 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676301\|ref\|XP_011650563.1\|	1.9e-78	85.03	PREDICTED: vesicle-associated protein 1-4 [Cucumis sativus]	[more]
gi\|659102705\|ref\|XP_008452271.1\|	2.1e-69	86.39	PREDICTED: toll/interleukin-1 receptor-like protein [Cucumis melo]	[more]
gi\|700201092\|gb\|KGN56225.1\|	1.9e-54	88.24	hypothetical protein Csa_3G102820 [Cucumis sativus]	[more]
gi\|470113788\|ref\|XP_004293102.1\|	4.4e-51	62.26	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A5 [Fragaria vesca subsp. vesca]	[more]
gi\|743853653\|ref\|XP_011029576.1\|	2.2e-50	64.24	PREDICTED: uncharacterized protein LOC105129282 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000157	TIR_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla011771	Cla011771.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	GENE3D	G3DSA:3.40.50.10140		coord: 33..132 score: 2.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 35..131 score: 9.2
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 33..166 score: 1.3
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROFILE	PS50104	TIR	coord: 32..157 score: 14
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	unknown	SSF52200	Toll/Interleukin receptor TIR domain	coord: 33..157 score: 1.16
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 1..166 score: 1.2
None	No IPR available	PANTHER	PTHR31008:SF2	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN-CONTAINING PROTEIN	coord: 1..166 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla011771	Cla97C10G190680	Watermelon (97103) v2	wmwmbB148
Cla011771	Csa3G102820	Cucumber (Chinese Long) v2	cuwmB226
Cla011771	MELO3C016529	Melon (DHL92) v3.5.1	mewmB458
Cla011771	ClCG10G006820	Watermelon (Charleston Gray)	wcgwmB066
Cla011771	CSPI03G06050	Wild cucumber (PI 183967)	cpiwmB224
Cla011771	Cucsa.074640	Cucumber (Gy14) v1	cgywmB077
Cla011771	CmaCh04G009100	Cucurbita maxima (Rimu)	cmawmB680
Cla011771	CmaCh16G007890	Cucurbita maxima (Rimu)	cmawmB309
Cla011771	CmoCh16G008500	Cucurbita moschata (Rifu)	cmowmB303
Cla011771	Lsi05G007070	Bottle gourd (USVL1VR-Ls)	lsiwmB358
Cla011771	Cp4.1LG14g00280	Cucurbita pepo (Zucchini)	cpewmB220
Cla011771	CsGy3G006140	Cucumber (Gy14) v2	cgybwmB211
Cla011771	MELO3C016529.2	Melon (DHL92) v3.6.1	medwmB446
Cla011771	Carg21084	Silver-seed gourd	carwmB0469
Cla011771	Carg00030	Silver-seed gourd	carwmB0664
Cla011771	CsaV3_3G006150	Cucumber (Chinese Long) v3	cucwmB233
Cla011771	Bhi11G000620	Wax gourd	wgowmB039

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla011771	Cucurbita pepo (Zucchini)	cpewmB405
Cla011771	Cucurbita moschata (Rifu)	cmowmB674