CmaCh04G008930 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCTGGTTTTAACTGACATCGGCATTCATTCATACAATCGACTTAGAGGTTAGATGTTCAGAAATAGCCTATGTCCGAAAACAAAAAAGCTATTATCTCTAGTTATTAGTCATTTATTATTATTATTATTTTAATTTTAGTTAAATGTTATGCGATGTGATGTATAAATTTTTAAATGCCTTTATTTTAAACCTTCAATTTTGTAGAGATTTTATATTAGATTGTTTATTTTTTTTTAAATGATGTAATAAAAACTAACATAAATACATCTTTTAGGTATTTATTTATAAACCCATTGAAATAACCTTGAAAGTCAATACAATTACCCTCTTATTTTAATATAACTACAACATCTTATTAAACCATAGAATTTAAACAAAGGAAAGATTAACTTTTAAGTTAATTATAAGTTTAGATACTATACTTTTAAAAATTAATGTTAATGCCTAATAAATTTAATACATACTCTATATTTTAAAAAATTAATTAATTATATGAGATATAAAATTGAATTTTATAATTGGTAGATGTCTATTAAGTTTACAAATTTTCAAAAGAATACTAAATAGAAACCATTTACATTGAAACAATATTTTTTAAAAATTAAAAGAAATTGTAATACACAAAATTATTTTAAAGTTAGAAAAAAAAACAAATAAACCCAAATATGGAAGATTTAAAAACAAAACCTATAATATTAAATAAGGAAGGAAACAAAGAAAAAGGTATTGTCAGATGGGGGCAGGAAGTAGGGTCCAGTTCCACGTGGGGATAGGGGTAAAATGGTAAAATAAGAAAAACAGTTCGGAGAGAGAGAAAAGAAAGGTAAGGATATTGGTTTTGGTAGAAAAAGACGCATCCAGTCTCCACCACACCACACCATATTGTCAAAAATCCCATTCCCCACTCCTTCCTTCCTTCCTTCCTCCATTGCCAATGCCACCACTGACCCATTGATTCCAACTACCACATACAAATCAAAACAAAACATATACTGTAAAATTAAGATTCACTCACACCACTACGCGATCTCCCTCTGGTTTTTGTTCTTCCTCCACAGGCCTTTTTCTTTTCTTCCCCTTCCCATTCAACCGACTTCCCCTGTATCTCTCTGCCCCAGATTCATCTTCTTCTTCCCTCTTTCTGCGAAGGTAGCCTCTTTCCCCATCTGGGTCGCTCTCTTTTTTGTTGCAAACGCTAATATCACTCTTCTTCTCGACTTGTTAACCCAACTCCACTTCTGGGTTTCTTCTGTTTTGTTTTCTAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTAATTTTTCTTCATCATTTTTTGCTTTTCTTTATCTACTGCTGATTCATTCTGATTCTTTCTTTGTTTGATTCATCATGTATAACGTCCTCTTTTAATTGTGTTGTGTTGTGTTGGTTTGATAATCTTTGTCTGTGCTACTCTGAGTATGGAGTTGTGTTTCTTTTGGACGTGATGTGTTGTATGTGATGGTGATTTTGTGTTGTGTGAAAATGGCAGGTATCTTGCTGAATTACTGTCAGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGGTGGGTTTTCATGATCTCTCTCTACTTTGCATTTTGACTATTGAAATATCTATTCTTATTTCTTATGCCGCTGACATTAGTGGAATCAATGGTATCTATCAAGTGGTATTAGAGCATCAATGTAGGCAATAACTTGTTGGATGAAAGAAAAGCTTAAGGCTCAGGTGGGTTTTCTATAGAAGAAAATTTAAGATGCTGAAAGGTGTTGGTGACAGGAATTCGTTGACTCAAAAGCAAGCAAGTTCAATAATGGTGAAGAAGATGCTAATCATGTTTGGTCAGGTAGAACAATTGTTGAAGGAGATATTGTCACTTGCTATTAGCGAAGCGAATCTTCAACGAGCAAAATGATGGAATTTGTCACTGTGACGGCCCAAACCTACTGCTAGCAAGATTTTTAAAACACGTATGCTATGGAGAGGTTTCCACACCTTATAAAGAATGTTTTGTTCTCCTCCCCAATCGATGTGGGATCTCACAATCCACCTCCCTTTGAGGCCCAACATTCCTGCTGACACTCGTTCCCTTCTCCAGTTGATGTGGGACACCCCAAGTTCACCAGTATGATGGAACATGTAGCATGGAGTAGTATAGTCTTTGCCATTCATAAGGTAGTTTAAGAGAGTAGCTTTGTGTTCGTTTGCGACCACCAGTTGTAAATAGAGGTTCGGTGGTGGCTGCGGGAGAGAGAGCTTTGTGGTTGTTTGGCTCGAGCTTGCTAAAAAATTCAAAATCCATTCTACCTCGAGGTACTTGAGATTATCTCCAAGAGTGTCATCTTCTCCATGTGGACGGAGGCAAAAATGTATTTTCCTACCTTACTCAGTCTTTGTCAACTCGTAATTAATCAGACCATAGTCGACTACAATCTTTTCTACGTCTTCGCCCATAAAAAATGATGTTAACGAACTTGGGATGATGCTATGCATCTAAGACATGTTCTTTACAGTTTTTTGGATCCTCTGCCCCACATGAATAGGCATGTGGTGATAATTTTCTATGAGTAACAAGCCAACTATCTGCAATTCGCCCGTAACCATCTTAAACACGAGTATTTCTTAAGTCAGTTGCATGAACACCCCTTAAGTTATTATCTATCGTTGCAGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTTGAGCACGGGAGCCCTTACAGGTCATTAGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGTAAATCTATAAATATCCTACTGGATTTAAATTTTTTCGTATATTTAAAGTCGATTGTCCTTGATCTATTTCTTTTTAGTTTTGCTAGTTACTCAATAGGAAGGTTTTCTCTTTAATCAGTGATTTCTTGGTATGAGAATACTTTTGAAAAATTGGAAAACCAAGTTTGACAATAGCCTACCTAGTTATTAAAATTTCATCTGGGCTTGAATCCTGAACTTTGTAGGGTATCTTCAGAGGTCCCTAGTCCTTACTACAGCGGTACTCGTTGGTTCTGACCCGAGCATTCTCGAAATAGAATTTGTAGTTCTTCGTATTTGTAATTTACACGTGTGGTTTAGTTATAAAATACTTCTACTGCAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATGTAAGTTCAAATATTTTTATGTTAGGTGGTGATTGTACTGACCTTTTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTCGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGTACTGAAAAAACTACTCGGTGTTTGTATTTTACTCTTTTATTTTTTATAGTTAATCTTGTCTAACGTGTGATATACATATTTTGTTGAACATAACTCTTTGTGGGAAACACTCGCACTTTTTATTAACACTAATCGAAAAGAGATTACAAAACACTTTGTAGAAAATATACAATGGGCTCATACAATTATTGGGTTTGACCCTACTGGACTAGTGATGATAGATGATATTTCAACATATTTTACTCGCTTTCTCTTATGAGTTCTCGCTCTCTCGTCTTTGAGATAACTGCTCGATTATAGATTTCGAGTAGTCAGCCTTTCTTTAATGTCTTTAATATATGTTCTGAATATGGATATGGGAGCATTTGATACTACTTGCAATGGATATGAATGTTGTGGTTTAGGAAGAGAAGCTAAGGGACAAGCCTGGATATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGTATTAACAAAACATCTCAATCACCAACAAATCCTCTCATTGTTCTCTTATGGAGCTTTTGTTATTCCAGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCATTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAGTAGGAATGGTGACTTCCCGACAGCGTCGACGAGATGACGAGCTTCGTCGACGCTTTGTTCAACCCATGGAAGCTGGTTTTCATCATTGAATAGCAAGTTAACTTTTGCTGCCTTCACATGGTCAAGAGTGTTGCTGATTTTGCTCTGCTCAATCTGATAGGCCTATGTTAATTGGCTCACCACTTTTTTTCCCTTAATATGGGAGGGAAGGAGAATCCCCTCCACCATTTGAACATTTTTTCATTTTTTTTTCCTAAGGTAGCAATTTAATTTAGGTTAAATTACAAATGCAGTTCCATCAACAACTTTTAACGGTTATGTTTTTATTTACTCCTTAAAATTTAAATGTTATTGCTCTAGACTTTAAGTTGTGATTTTATGTAATTTAGGGTGGTAATCGTGTTAATTAAATGTGACAGCAGAAGCCATCTGTGAAATCACCAT ATGAGTCTGGTTTTAACTGACATCGGCATTCATTCATACAATCGACTTAGAGGCCTTTTTCTTTTCTTCCCCTTCCCATTCAACCGACTTCCCCTGTATCTCTCTGCCCCAGATTCATCTTCTTCTTCCCTCTTTCTGCGAAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTATCTTGCTGAATTACTGTCAGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTTGAGCACGGGAGCCCTTACAGGTCATTAGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTCGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAGCTAAGGGACAAGCCTGGATATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCATTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAGTAGGAATGGTGACTTCCCGACAGCGTCGACGAGATGACGAGCTTCGTCGACGCTTTGTTCAACCCATGGAAGCTGGTTTTCATCATTGAATAGCAAGTTAACTTTTGCTGCCTTCACATGGTCAAGAGTGTTGCTGATTTTGCTCTGCTCAATCTGATAGGCCTATGTTAATTGGCTCACCACTTTTTTTCCCTTAATATGGGAGGGAAGGAGAATCCCCTCCACCATTTGAACATTTTTTCATTTTTTTTTCCTAAGGTAGCAATTTAATTTAGGTTAAATTACAAATGCAGTTCCATCAACAACTTTTAACGGTTATGTTTTTATTTACTCCTTAAAATTTAAATGTTATTGCTCTAGACTTTAAGTTGTGATTTTATGTAATTTAGGGTGGTAATCGTGTTAATTAAATGTGACAGCAGAAGCCATCTGTGAAATCACCAT ATGAGTCTGGTTTTAACTGACATCGGCATTCATTCATACAATCGACTTAGAGGCCTTTTTCTTTTCTTCCCCTTCCCATTCAACCGACTTCCCCTGTATCTCTCTGCCCCAGATTCATCTTCTTCTTCCCTCTTTCTGCGAAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTATCTTGCTGAATTACTGTCAGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTTGAGCACGGGAGCCCTTACAGGTCATTAGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTCGTTGGACGACTTCTGGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAGCTAAGGGACAAGCCTGGATATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCATTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAG MSLVLTDIGIHSYNRLRGLFLFFPFPFNRLPLYLSAPDSSSSSLFLRSLCMMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
BLAST of CmaCh04G008930 vs. Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 4.7e-100 Identity = 188/294 (63.95%), Postives = 227/294 (77.21%), Query Frame = 1
BLAST of CmaCh04G008930 vs. Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana GN=At4g26480 PE=2 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 8.1e-76 Identity = 157/291 (53.95%), Postives = 200/291 (68.73%), Query Frame = 1
BLAST of CmaCh04G008930 vs. Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.4e-75 Identity = 157/279 (56.27%), Postives = 193/279 (69.18%), Query Frame = 1
BLAST of CmaCh04G008930 vs. Swiss-Prot
Match: SPIN1_ORYSJ (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 9.9e-74 Identity = 155/279 (55.56%), Postives = 192/279 (68.82%), Query Frame = 1
BLAST of CmaCh04G008930 vs. Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 4.9e-73 Identity = 152/281 (54.09%), Postives = 190/281 (67.62%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TrEMBL
Match: A0A0A0L3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110600 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 7.9e-171 Identity = 299/317 (94.32%), Postives = 305/317 (96.21%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TrEMBL
Match: A0A067LD84_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00257 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.7e-131 Identity = 240/307 (78.18%), Postives = 259/307 (84.36%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TrEMBL
Match: M5XN70_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009432mg PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 4.7e-131 Identity = 227/293 (77.47%), Postives = 261/293 (89.08%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TrEMBL
Match: A0A061DWG3_THECC (RNA-binding KH domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_006149 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 4.8e-128 Identity = 228/293 (77.82%), Postives = 257/293 (87.71%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TrEMBL
Match: W9R1Z3_9ROSA (KH domain-containing protein OS=Morus notabilis GN=L484_013120 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 1.2e-126 Identity = 227/310 (73.23%), Postives = 260/310 (83.87%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TAIR10
Match: AT1G09660.1 (AT1G09660.1 RNA-binding KH domain-containing protein) HSP 1 Score: 365.9 bits (938), Expect = 2.6e-101 Identity = 188/294 (63.95%), Postives = 227/294 (77.21%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TAIR10
Match: AT4G26480.1 (AT4G26480.1 RNA-binding KH domain-containing protein) HSP 1 Score: 285.4 bits (729), Expect = 4.5e-77 Identity = 157/291 (53.95%), Postives = 200/291 (68.73%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TAIR10
Match: AT3G08620.1 (AT3G08620.1 RNA-binding KH domain-containing protein) HSP 1 Score: 284.6 bits (727), Expect = 7.8e-77 Identity = 157/279 (56.27%), Postives = 193/279 (69.18%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TAIR10
Match: AT5G56140.1 (AT5G56140.1 RNA-binding KH domain-containing protein) HSP 1 Score: 276.2 bits (705), Expect = 2.8e-74 Identity = 152/281 (54.09%), Postives = 190/281 (67.62%), Query Frame = 1
BLAST of CmaCh04G008930 vs. TAIR10
Match: AT2G38610.1 (AT2G38610.1 RNA-binding KH domain-containing protein) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70 Identity = 153/283 (54.06%), Postives = 187/283 (66.08%), Query Frame = 1
BLAST of CmaCh04G008930 vs. NCBI nr
Match: gi|700201130|gb|KGN56263.1| (hypothetical protein Csa_3G110600 [Cucumis sativus]) HSP 1 Score: 607.8 bits (1566), Expect = 1.1e-170 Identity = 299/317 (94.32%), Postives = 305/317 (96.21%), Query Frame = 1
BLAST of CmaCh04G008930 vs. NCBI nr
Match: gi|449431864|ref|XP_004133720.1| (PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus]) HSP 1 Score: 577.0 bits (1486), Expect = 2.1e-161 Identity = 281/289 (97.23%), Postives = 286/289 (98.96%), Query Frame = 1
BLAST of CmaCh04G008930 vs. NCBI nr
Match: gi|802563065|ref|XP_012066698.1| (PREDICTED: KH domain-containing protein At1g09660/At1g09670 isoform X2 [Jatropha curcas]) HSP 1 Score: 485.7 bits (1249), Expect = 6.5e-134 Identity = 239/294 (81.29%), Postives = 260/294 (88.44%), Query Frame = 1
BLAST of CmaCh04G008930 vs. NCBI nr
Match: gi|645223586|ref|XP_008218700.1| (PREDICTED: KH domain-containing protein At1g09660/At1g09670 isoform X1 [Prunus mume]) HSP 1 Score: 481.5 bits (1238), Expect = 1.2e-132 Identity = 230/293 (78.50%), Postives = 263/293 (89.76%), Query Frame = 1
BLAST of CmaCh04G008930 vs. NCBI nr
Match: gi|802563063|ref|XP_012066697.1| (PREDICTED: KH domain-containing protein At1g09660/At1g09670 isoform X1 [Jatropha curcas]) HSP 1 Score: 476.5 bits (1225), Expect = 3.9e-131 Identity = 240/307 (78.18%), Postives = 259/307 (84.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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