Carg25383 (gene) Silver-seed gourd

Overview
NameCarg25383
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionKh domain-containing protein
LocationCucurbita_argyrosperma_scaffold_283 : 129879 .. 133527 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCCCCCTTTCTTTCTGCAAAGGTACGCTTCTTTCTCTATCTGGGTCGCTCTGTTCTTCGTTGGATATCTTAATTTCACTCTTCTTCTCCACTTATTAACCCAATTCCACTTCTGGGTTCCTTCTATTTTGTTGTGTTCTTCAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTTCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGGTAATTTCCCTTTCTCTGTTTCTCAATTCTTCATCATGATTTGCTTTTTGTTTTGTTTTTTTTTGTTTTTTGGACTGCTTGATTCAGATTCCTTGTTTGATTGATCATGTCATTCTGTTTTTATCCCACTTTTTAACTCTCTTGTGTTGGTTTGATCATCTTTGTCATTGCATTTGAATACTGACTAGAAGCCCTATTGAGCTTTTAGTGATGTTGTGTTGTGTGACAATGGCAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGGTGGGGTTATAAGATCTCTACTATTGCATTATGTTGTTGCAATACTTATTATTGTTTCTTGTAGTTTGGATTATTTGTTCCTTTGAAGTTTATTATGGGTAGACACTGTTTTCTTGATCATTTGAACAAATTTAATTACAACCGAGCATACGATTAGAGAAGCAAACGAGTAACGATCAATTGGGAAGAAGTTTTTTACTCCCTCGACTCGAGAATGGACTGGTATGTGAATTATATATCGAAAATACATGAGATTAGATGATCGGAACTGAAGTTTCGTGGAGAGGCTACGAACAAGGGGACATTTTGTGGCTATGTATTGCAATGGGAATGTTGTCTGAGGAGAGGTTGGAAGTCAGTCTTTGTGACACGGAGTTAAGCGTTCTCATTGTTTGTTGGCAGCTATTAAATACTAGCCTTATCTTATATCATTGAGTTGTAATGTGGGTCGGGTCAATCTAAGTTTAAGCTTAGCCTGTTATTAGAGCTAGACACTGGGTGGTGTGCTAGCGAGGACGATGGGCCTCCAAGGAGGGTGGGTTGTGAAATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGACTTGTTCTAAAAACCTTGAGGGAATGCTCGGAAGGGAAACCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGCGGTTACACTAAGGCCTACTATGTCCAAGAGCGTTTCATTTTCTCTGTGTGGATGGAGCCAAAGATGAATCCTATTGGCCTACTCGATACTTTGTCAAGTCGTAATTAATTAGACAAAATCAATTACCATAAGATGACGTTAACTTGTGATGATGTCATGAATCTGAGACATGAGACATGAGACATGATCGTGAGAAAAGTTCCCAATGACGGGTAATTTTTCATGAATAGCTAGCCATTTATCTTCGGAGTCGTCATCTTACACGAGTATTTGCTTAGTCAGTTGCATGTGCACTCCTTATATAAGACGAGCATTCTCTTAGTCAATTGCATGTGCACGCCTTATTTATTACATCTCATTTCAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACAAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGTAAATATATATTTGTCCTTGATCTACTTCTTTTCCGTGTTGCTAGTTTTTCGATATGAACGCTTTCTCGTTGATCCCTATTTTCTTTGTATAAGGATATTTTTCTAAAAATGGAAAACTTAAACTTTCTTTTAAATGAATGAAAGAATACAATACAGAAAGACAATAGCCTAGATTTGAGATACAAGTGTTTCGAGTTATTAAATTTTCATCTCGAGGGCTTGAATTCAGACCTTTGTAGGGTATCTCCAAACATCCCGAGCCATTACTACTGGGGAATTCCTTGGTTCTAACCTATGTATCCTTAAAATAGAATAAGTAGTTCTTCGTGTTTTGAAACAGAACCATAGAATAAGTAACGTATCTATGACAACATGTGTGCAACACTTGGACACTCTATGTAACAACCTAAGCTCACCGCTAGCAGATATTGTCCTTTTGGTCTTTCCCTTTCGGGTTCCCTTATTGTCCTTTTGGTCTTTCCCTTTCGGGTTTCCCTTCAAGGTTTGGACACTCTATGTAACAGCCTAAGTCCACCACTAGCAGATATTGTCCTCTTTGGGCATTCCCTCAAAGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGGCTCGTTCTCCTCCCCAATCGATGTGGGATCTCATAATAAATAGACACGAACGGTAATAGAACAAAAATTAATAGATTTTTGGAGTGAAATACATTAAACTCATACATGCATACATTTCAATAAATGTGTACTTGTCGTATCCGTGTCCTTGATTTTTTTTAGAAACCCGTGCTTAATGACATGTTTACGGCAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACGTGAGTCGATATTCTTACGTTAGGTGATGATATTACTGACCTTTTGCCTCTCTGATGTTCATAGTTTGTTGCTTAAATCATGTCAGTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTGGAGGTACTAAAAGTTTTGAATCTCCTAGTCCTAACTTAAATCTTCAATAGTACTTACAATGGATCTGAATGTTGTGTGCTTTAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGTATGAACTAAACAACGCCCACATCGACTAAACCTCTGATCGTTTTATTATGAAGTCGTGTTCTTATGGAGTTGTTGTGTATTCCAGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGTAAGGTAAGGTAAGGTAAGGTAAGGTAAGGAGTAATGACGAGCTTCGTGGTCGACACTGTGTCGGTTGAAACCACCTTGAGAGCTTTTGGTGCCTTCTTGTCTTCAGCAGATGGTCAAGAATTTTGCTGATTTTGCTGTGCTAAATCTGATAGATAGGCTTATGTTATGCTATTTGGCTGACCACTTTTTCCCTAATATGGGAGGGAAGGAGAACCCCCTCCCCCCAATTCAACATTTTTTCATTTTTTTTTTTTTT

mRNA sequence

CCCCCCCCTTTCTTTCTGCAAAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTTCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACAAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTGGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGTAAGGTAAGGTAAGGTAAGGTAAGGTAAGGAGTAATGACGAGCTTCGTGGTCGACACTGTGTCGGTTGAAACCACCTTGAGAGCTTTTGGTGCCTTCTTGTCTTCAGCAGATGGTCAAGAATTTTGCTGATTTTGCTGTGCTAAATCTGATAGATAGGCTTATGTTATGCTATTTGGCTGACCACTTTTTCCCTAATATGGGAGGGAAGGAGAACCCCCTCCCCCCAATTCAACATTTTTTCATTTTTTTTTTTTTT

Coding sequence (CDS)

CCCCCCCCTTTCTTTCTGCAAAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTTCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACAAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTGGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGTAA

Protein sequence

PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Homology
[Close]
BLAST of Carg25383 vs. NCBI nr
Match: KGN56263.1 (hypothetical protein Csa_3G110600 [Cucumis sativus])

HSP 1 Score: 564.3 bits (1453), Expect = 2.5e-157
Identity = 284/301 (94.35%), Postives = 288/301 (95.68%), Query Frame = 0 

Query: 1   PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPF 60
           P   FL+SLCVMGERTPPGSYFHYPPPS+HASPHRTPSIPLDRER LAELLSERQKLGPF
Sbjct: 100 PSSLFLRSLCVMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPF 159

Query: 61  VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQME 120
           VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MD+EGWPP    
Sbjct: 160 VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXX 219

Query: 121 GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 180
            SGHVHGMG LQAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS
Sbjct: 220 XSGHVHGMGPLQAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 279

Query: 181 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD 240
           LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD
Sbjct: 280 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLD 339

Query: 241 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTG 300
           HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTG
Sbjct: 340 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTG 399

Query: 301 R 302
           R
Sbjct: 400 R 399

[Close]
BLAST of Carg25383 vs. NCBI nr
Match: XP_022942905.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_023552162.1 KH domain-containing protein At1g09660/At1g09670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561.2 bits (1445), Expect = 2.1e-156
Identity = 277/291 (95.19%), Postives = 281/291 (96.56%), Query Frame = 0 

Query: 11  VMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 70
           +MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 71  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGS 130
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVH +G 
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 120

Query: 131 LQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 190
           LQAHSM WPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC
Sbjct: 121 LQAHSMAWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180

Query: 191 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 250
           RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL
Sbjct: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 240

Query: 251 KPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
           KPVDELLDQYKKQQLRELALLNGTLREESPSMS    PFN+TGLKRAKTGR
Sbjct: 241 KPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]
BLAST of Carg25383 vs. NCBI nr
Match: XP_022988372.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima])

HSP 1 Score: 560.1 bits (1442), Expect = 4.7e-156
Identity = 276/291 (94.85%), Postives = 281/291 (96.56%), Query Frame = 0 

Query: 11  VMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 70
           +MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 71  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGS 130
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVH +G 
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 120

Query: 131 LQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 190
           LQAHSM WPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC
Sbjct: 121 LQAHSMAWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180

Query: 191 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 250
           RVYIRGKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL
Sbjct: 181 RVYIRGKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 240

Query: 251 KPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
           KPVDELLDQYKKQQLRELALLNGTLREESPSMS    PFN+TGLKRAKTGR
Sbjct: 241 KPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]
BLAST of Carg25383 vs. NCBI nr
Match: XP_022136599.1 (KH domain-containing protein At1g09660/At1g09670 [Momordica charantia])

HSP 1 Score: 553.9 bits (1426), Expect = 3.3e-154
Identity = 281/291 (96.56%), Postives = 283/291 (97.25%), Query Frame = 0 

Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIP-LDRERYLAELLSERQKLGPFVQVLPHCSRL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIP  DRERYL ELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60

Query: 72  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGS 131
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVHGM  
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120

Query: 132 LQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 191
           LQAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC
Sbjct: 121 LQAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180

Query: 192 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 251
           RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD+AVAVLESLL
Sbjct: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLL 240

Query: 252 KPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
           KPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR
Sbjct: 241 KPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 290

[Close]
BLAST of Carg25383 vs. NCBI nr
Match: XP_004133720.1 (PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242.1 PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis melo])

HSP 1 Score: 550.1 bits (1416), Expect = 4.8e-153
Identity = 277/290 (95.52%), Postives = 280/290 (96.55%), Query Frame = 0 

Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MD+EGWPP     SGHVHGMG L
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXXXSGHVHGMGPL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 289

[Close]
BLAST of Carg25383 vs. TAIR10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 346.3 bits (887), Expect = 1.9e-95
Identity = 176/271 (64.94%), Postives = 212/271 (78.23%), Query Frame = 0 

Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 132 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 191
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 192 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 251
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 252 KPVDELLDQYKKQQLRELALLNGTLREESPS 282
           KP+DE +D YK++QL+ELA LNGTLREESPS
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPS 275

[Close]
BLAST of Carg25383 vs. TAIR10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-76
Identity = 162/283 (57.24%), Postives = 193/283 (68.20%), Query Frame = 0 

Query: 27  PSSHASPH-RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGL--NQ 86
           PS  ASP  RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++G+  NQ
Sbjct: 12  PSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQ 71

Query: 87  TSVDHERFEH--GSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRV 146
              D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +M W   
Sbjct: 72  GFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------AMEWQ-- 131

Query: 147 QGGIPATPI---VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 206
             G PA+P    VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRGKG
Sbjct: 132 --GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 191

Query: 207 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 266
           SIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE  D
Sbjct: 192 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 251

Query: 267 QYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
             K+QQLRELALLN  LRE SP  S    PFNS  +KR KTGR
Sbjct: 252 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]
BLAST of Carg25383 vs. TAIR10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 276.6 bits (706), Expect = 1.9e-74
Identity = 151/280 (53.93%), Postives = 192/280 (68.57%), Query Frame = 0 

Query: 26  PPSSHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 85
           PPS+  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH  RL+NQEI R++
Sbjct: 35  PPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVT 94

Query: 86  GLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWP 145
            L + ++   RF+H SP  S G   N R  D+ GW   Q      V    S   + +  P
Sbjct: 95  TLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSV--SSSPAPNWLNSP 154

Query: 146 RVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGS 205
               G+    IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T+CRV IRG+GS
Sbjct: 155 GSSSGL----IVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 214

Query: 206 IKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQ 265
           IKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL PV+E  D 
Sbjct: 215 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDF 274

Query: 266 YKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKT 300
           YKKQQLRELALLNG+LREE   MS    P+NS G+KRAKT
Sbjct: 275 YKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]
BLAST of Carg25383 vs. TAIR10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 265.4 bits (677), Expect = 4.3e-71
Identity = 148/282 (52.48%), Postives = 187/282 (66.31%), Query Frame = 0 

Query: 26  PPSSHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 85
           PPS+  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 86  GL--NQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMG 145
            L  N T +     +H SP  S G   N R  D+ GW              G    +S  
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGPNWLNS-- 158

Query: 146 WPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGK 205
            P    G+    I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+
Sbjct: 159 -PGSSSGL----IAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 218

Query: 206 GSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELL 265
           GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  
Sbjct: 219 GSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETH 278

Query: 266 DQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKT 300
           D YKKQQLRELALLNGTLREE   MS    P+NS G+KRAKT
Sbjct: 279 DMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]
BLAST of Carg25383 vs. TAIR10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 259.2 bits (661), Expect = 3.1e-69
Identity = 152/284 (53.52%), Postives = 185/284 (65.14%), Query Frame = 0 

Query: 24  YPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGL-- 83
           Y  P+  ASP    +  +D  +YL ELL+E QKL PF+QVLP CSRLLNQE+ R+SG+  
Sbjct: 10  YFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMS 69

Query: 84  NQTSVDHERFEH--GSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWP 143
           NQ   D +R  H   SP  S   +SN     L GW  +  E      GM      +M W 
Sbjct: 70  NQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGM------TMDWQ 129

Query: 144 RVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGS 203
              G  P++  VKR++RL++PVD YPN+NFVGRLLGPRGNSLKRVEA T CRV+IRGKGS
Sbjct: 130 GAPGS-PSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGS 189

Query: 204 IKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQ 263
           IKD  +E+KL+ +PGYEHLNE LH+L+EA+ P   +  RL  A  ++E LLKPVDE  D 
Sbjct: 190 IKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDF 249

Query: 264 YKKQQLRELALLN-GTLREESPSMS--XXXXPFNSTGLKRAKTG 301
            K+QQLRELALLN   LREESP  S      PFNS+G KR KTG
Sbjct: 250 IKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]
BLAST of Carg25383 vs. Swiss-Prot
Match: sp|Q8GWR3|QKIL5_ARATH (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 3.5e-94
Identity = 176/271 (64.94%), Postives = 212/271 (78.23%), Query Frame = 0 

Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 132 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 191
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 192 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 251
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 252 KPVDELLDQYKKQQLRELALLNGTLREESPS 282
           KP+DE +D YK++QL+ELA LNGTLREESPS
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPS 275

[Close]
BLAST of Carg25383 vs. Swiss-Prot
Match: sp|Q8GYR4|QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.8e-75
Identity = 162/283 (57.24%), Postives = 193/283 (68.20%), Query Frame = 0 

Query: 27  PSSHASPH-RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGL--NQ 86
           PS  ASP  RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++G+  NQ
Sbjct: 12  PSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQ 71

Query: 87  TSVDHERFEH--GSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRV 146
              D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +M W   
Sbjct: 72  GFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------AMEWQ-- 131

Query: 147 QGGIPATPI---VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 206
             G PA+P    VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRGKG
Sbjct: 132 --GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 191

Query: 207 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLD 266
           SIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE  D
Sbjct: 192 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 251

Query: 267 QYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
             K+QQLRELALLN  LRE SP  S    PFNS  +KR KTGR
Sbjct: 252 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]
BLAST of Carg25383 vs. Swiss-Prot
Match: sp|Q0WLR1|QKIL1_ARATH (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.4e-73
Identity = 151/280 (53.93%), Postives = 192/280 (68.57%), Query Frame = 0 

Query: 26  PPSSHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 85
           PPS+  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH  RL+NQEI R++
Sbjct: 35  PPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVT 94

Query: 86  GLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWP 145
            L + ++   RF+H SP  S G   N R  D+ GW   Q      V    S   + +  P
Sbjct: 95  TLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSV--SSSPAPNWLNSP 154

Query: 146 RVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGS 205
               G+    IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T+CRV IRG+GS
Sbjct: 155 GSSSGL----IVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 214

Query: 206 IKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQ 265
           IKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL PV+E  D 
Sbjct: 215 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDF 274

Query: 266 YKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKT 300
           YKKQQLRELALLNG+LREE   MS    P+NS G+KRAKT
Sbjct: 275 YKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]
BLAST of Carg25383 vs. Swiss-Prot
Match: sp|Q75GR5|SPIN1_ORYSJ (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.4e-71
Identity = 153/282 (54.26%), Postives = 192/282 (68.09%), Query Frame = 0 

Query: 27  PSSHASPHRTPSIPLDRE-RYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQT- 86
           P+ + SP +  S P D + +YLAELL+E QKLGPF+QVLP CS+LL+QEI R+S +    
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNH 70

Query: 87  ---SVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRV 146
                D  RF   SP  S    SN        W  +      H   +G  Q  SM W   
Sbjct: 71  GFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGL------HQERLGFPQGTSMDW--- 130

Query: 147 QGG--IPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGS 206
           QG    P++ +VK+++RLDVPVD YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRGKGS
Sbjct: 131 QGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGS 190

Query: 207 IKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQ 266
           IKD  +E+KL+ KPGYEHL++PLH+L+EAEFP   I++RL HA  V+E LLKPVDE  D 
Sbjct: 191 IKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDF 250

Query: 267 YKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
           YK+QQLRELA+LN TLRE+SP       PF++ G+KRAKTG+
Sbjct: 251 YKRQQLRELAMLNSTLREDSPH-PGSVSPFSNGGMKRAKTGQ 281

[Close]
BLAST of Carg25383 vs. Swiss-Prot
Match: sp|Q9FKT4|QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.8e-70
Identity = 148/282 (52.48%), Postives = 187/282 (66.31%), Query Frame = 0 

Query: 26  PPSSHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 85
           PPS+  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 86  GL--NQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSLQAHSMG 145
            L  N T +     +H SP  S G   N R  D+ GW              G    +S  
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGPNWLNS-- 158

Query: 146 WPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGK 205
            P    G+    I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+
Sbjct: 159 -PGSSSGL----IAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 218

Query: 206 GSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELL 265
           GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  
Sbjct: 219 GSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETH 278

Query: 266 DQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKT 300
           D YKKQQLRELALLNGTLREE   MS    P+NS G+KRAKT
Sbjct: 279 DMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]
BLAST of Carg25383 vs. TrEMBL
Match: tr|A0A0A0L3B7|A0A0A0L3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 1.6e-157
Identity = 284/301 (94.35%), Postives = 288/301 (95.68%), Query Frame = 0 

Query: 1   PPPFFLQSLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPF 60
           P   FL+SLCVMGERTPPGSYFHYPPPS+HASPHRTPSIPLDRER LAELLSERQKLGPF
Sbjct: 100 PSSLFLRSLCVMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPF 159

Query: 61  VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQME 120
           VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MD+EGWPP    
Sbjct: 160 VQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXX 219

Query: 121 GSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 180
            SGHVHGMG LQAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS
Sbjct: 220 XSGHVHGMGPLQAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNS 279

Query: 181 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD 240
           LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD
Sbjct: 280 LKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLD 339

Query: 241 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTG 300
           HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTG
Sbjct: 340 HAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTG 399

Query: 301 R 302
           R
Sbjct: 400 R 399

[Close]
BLAST of Carg25383 vs. TrEMBL
Match: tr|A0A1S3BST0|A0A1S3BST0_CUCME (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 3.2e-153
Identity = 277/290 (95.52%), Postives = 280/290 (96.55%), Query Frame = 0 

Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MD+EGWPP     SGHVHGMG L
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXXXSGHVHGMGPL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 302
           PVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 289

[Close]
BLAST of Carg25383 vs. TrEMBL
Match: tr|A0A251RK07|A0A251RK07_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 3.1e-124
Identity = 227/298 (76.17%), Postives = 258/298 (86.58%), Query Frame = 0 

Query: 8   SLCVMGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 67
           S CVMGER P GSYF YPPP  HASPHR+ S+P+DRERYLAELL+E+QKLGPF+Q+LP C
Sbjct: 21  SSCVMGERIPSGSYFQYPPPGVHASPHRS-SLPVDRERYLAELLAEKQKLGPFMQILPLC 80

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHG 127
           SRLLN EIRR+SG NQT VDHER EH SP+R+L Q +NGR MDLEGWP MQME +GH+  
Sbjct: 81  SRLLNHEIRRVSGFNQTLVDHERLEHESPFRTLSQNANGRPMDLEGWPGMQMEENGHIQR 140

Query: 128 MGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEAL 187
           M   Q+ SMGWP VQ GIPATP+VKRV+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVEA+
Sbjct: 141 MAPFQSPSMGWPGVQ-GIPATPVVKRVIRLDVPVDKYPHYNFVGRILGPRGNSLKRVEAM 200

Query: 188 TECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLE 247
           TECRVYIRG+GS+KD+++EEKLK+KPGYEHLNEPLH+LVEAEFPED IN+RLDHAVA+LE
Sbjct: 201 TECRVYIRGRGSVKDSVKEEKLKEKPGYEHLNEPLHVLVEAEFPEDIINARLDHAVAILE 260

Query: 248 SLLKPVDELLDQYKKQQLRELALLNGTLREESPS----MSXXXXPFNSTGLKRAKTGR 302
           +LLKPVDE  D YKKQQLRELA+LNGTLREESPS      XXXX    TG+KRAKTGR
Sbjct: 261 NLLKPVDESFDHYKKQQLRELAMLNGTLREESPSXXXXXXXXXXXXXXTGMKRAKTGR 316

[Close]
BLAST of Carg25383 vs. TrEMBL
Match: tr|M5XN70|M5XN70_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 2.9e-122
Identity = 224/294 (76.19%), Postives = 255/294 (86.73%), Query Frame = 0 

Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGER P GSYF YPPP  HASPHR+ S+P+DRERYLAELL+E+QKLGPF+Q+LP CSRLL
Sbjct: 1   MGERIPSGSYFQYPPPGVHASPHRS-SLPVDRERYLAELLAEKQKLGPFMQILPLCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           N EIRR+SG NQT VDHER EH SP+R+L Q +NGR MDLEGWP MQME +GH+  M   
Sbjct: 61  NHEIRRVSGFNQTLVDHERLEHESPFRTLSQNANGRPMDLEGWPGMQMEENGHIQRMAPF 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           Q+ SMGWP VQ GIPATP+VKRV+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVEA+TECR
Sbjct: 121 QSPSMGWPGVQ-GIPATPVVKRVIRLDVPVDKYPHYNFVGRILGPRGNSLKRVEAMTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRG+GS+KD+++EEKLK+KPGYEHLNEPLH+LVEAEFPED IN+RLDHAVA+LE+LLK
Sbjct: 181 VYIRGRGSVKDSVKEEKLKEKPGYEHLNEPLHVLVEAEFPEDIINARLDHAVAILENLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPS----MSXXXXPFNSTGLKRAKTGR 302
           PVDE  D YKKQQLRELA+LNGTLREESPS      XXXX    TG+KRAKTGR
Sbjct: 241 PVDESFDHYKKQQLRELAMLNGTLREESPSXXXXXXXXXXXXXXTGMKRAKTGR 292

[Close]
BLAST of Carg25383 vs. TrEMBL
Match: tr|A0A2P4KVQ8|A0A2P4KVQ8_QUESU (Kh domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_62634 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.4e-121
Identity = 225/294 (76.53%), Postives = 251/294 (85.37%), Query Frame = 0 

Query: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71
           MGER PPGSYF YPPP   ASP R+ SIP DRERY+AELL+E+QKLGPF+QVLP CSRLL
Sbjct: 1   MGERIPPGSYFQYPPPGVPASPIRSASIPTDRERYMAELLAEKQKLGPFMQVLPMCSRLL 60

Query: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131
           NQEIRR+SG NQ+ VDHER EH SP RS GQ  NGR MDLEGWP MQME +GH+  M  L
Sbjct: 61  NQEIRRVSGFNQSFVDHERLEHESPLRSFGQPPNGRAMDLEGWPAMQMEENGHIQRMTPL 120

Query: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191
           Q  SMGWP VQ GIP TP+VKRV+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVEA+TECR
Sbjct: 121 QTPSMGWPGVQ-GIPTTPVVKRVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVEAMTECR 180

Query: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251
           VYIRG+GS+KDA++EEKLKDKPGYEHLNEPLH+LVEAEFPED IN+RLD+A+ +LE+LLK
Sbjct: 181 VYIRGRGSVKDAVKEEKLKDKPGYEHLNEPLHVLVEAEFPEDVINARLDYAMTILENLLK 240

Query: 252 PVDELLDQYKKQQLRELALLNGTLREESPS----MSXXXXPFNSTGLKRAKTGR 302
           PVDE LD YKKQQLRELA+LNGTLREESPS      XXXX    TG+KRAKTGR
Sbjct: 241 PVDESLDHYKKQQLRELAMLNGTLREESPSXXXXXXXXXXXXXXTGMKRAKTGR 293

The following BLAST results are available for this feature:
BLAST of Carg25383 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56263.12.5e-15794.35hypothetical protein Csa_3G110600 [Cucumis sativus][more]
XP_022942905.12.1e-15695.19KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_0... [more]
XP_022988372.14.7e-15694.85KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima][more]
XP_022136599.13.3e-15496.56KH domain-containing protein At1g09660/At1g09670 [Momordica charantia][more]
XP_004133720.14.8e-15395.52PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >X... [more]
BLAST of Carg25383 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09660.11.9e-9564.94RNA-binding KH domain-containing protein[more]
AT3G08620.11.5e-7657.24RNA-binding KH domain-containing protein[more]
AT4G26480.11.9e-7453.93RNA-binding KH domain-containing protein[more]
AT5G56140.14.3e-7152.48RNA-binding KH domain-containing protein[more]
AT2G38610.13.1e-6953.52RNA-binding KH domain-containing protein[more]
BLAST of Carg25383 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GWR3|QKIL5_ARATH3.5e-9464.94KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q8GYR4|QKIL4_ARATH2.8e-7557.24KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08... [more]
sp|Q0WLR1|QKIL1_ARATH3.4e-7353.93KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26... [more]
sp|Q75GR5|SPIN1_ORYSJ5.4e-7154.26KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
sp|Q9FKT4|QKIL2_ARATH7.8e-7052.48KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56... [more]
BLAST of Carg25383 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3B7|A0A0A0L3B7_CUCSA1.6e-15794.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1[more]
tr|A0A1S3BST0|A0A1S3BST0_CUCME3.2e-15395.52KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A251RK07|A0A251RK07_PRUPE3.1e-12476.17Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1[more]
tr|M5XN70|M5XN70_PRUPE2.9e-12276.19Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1[more]
tr|A0A2P4KVQ8|A0A2P4KVQ8_QUESU1.4e-12176.53Kh domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_62634 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR032377STAR_dimer
IPR004087KH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25383-RACarg25383-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 151..251
e-value: 0.0017
score: 27.6
IPR032377STAR protein, homodimerisation regionPFAMPF16544STAR_dimercoord: 45..78
e-value: 1.5E-10
score: 40.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..301
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 12..301
NoneNo IPR availablePANTHERPTHR11208:SF48SUBFAMILY NOT NAMEDcoord: 12..301
NoneNo IPR availableCDDcd02395SF1_like-KHcoord: 156..276
e-value: 4.82104E-50
score: 162.798
IPR036612K Homology domain, type 1 superfamilySUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 157..276