Carg00010 (gene) Silver-seed gourd

Overview
NameCarg00010
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionKh domain-containing protein
LocationCucurbita_argyrosperma_scaffold_001 : 35600 .. 38992 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTTTCTAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTAATTTTTCTTCATCATTTTTTTGCTTTTCTTTATCTACTGCTGATTCATTCTGATTCTTTCTTTGTTTGATTCATCATGTATAACGTCCTGTTTTTAATTGTGTTGTGTTGTGTTGTGTTGGTTTGATAATCTTTGTCTGTGCTACTGAGTATGGAGTTGTGTTGCTTTTGGACGTGATGTGTTGTATGTGATGGTGATTTTGTGTTGTGTGAAAATGGCAGGTATCTTGCTGAATTACTGTCTGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGGTGGGTTTTCAAGATCTCTCTCTACTTTGCATTTTGTTGTTGAAACATCTATTCTTATTTCTTATGCTGACATTAGTGGAATCAATGGTATCTATCAAGTGGTATTAGAGCATCAATTTAAGCAATAACTTGTTGGATGAAAGAAAAGCTTAAGGCTCAAGTGGGTTCTCTATAGAAGAAAATTTAAGATGCTGAAAGATGTTGGTGACAGGAATTCGTTGACTCGAAAGCAAGCAAGCTCAATAATGGTGAAGAAGATGCTAATCATGTTTGGTCAGGTAGAACAATTGTTGAAGGAGATATTGTCACTTGTTATTAGCGAAGCAAATCTCCAACGAGCAAAACGATGGAATTTGTCACTGTAATGGCCCAAACCTATTGCTAGCAAGATTTTTAAAACACGTCTGCTAGGGAGAGGTTTTCACACCTTATAAAGAATGTTCCGTTCTCCTCCCCAATCGATGTGGGATCTCACAATCCACCTCCCTTTGAGGCCCAACGTCCTTGCTGGCACTCGTTCCCTTCTTGAGTTGATGTGGGACACCCCAAATTCACCGGTATGATGGATCATGTAGCATGGAGTAGTATAGTCTTTGCCATTCATAAGGTAATTTAAGAGAGTAGTTTTGTGTTCGTTTGCAACCACCAGTTGTAAGTAGAGGTTTGGTGGTGGCTGCAGGAGAGAGAGCTTTGTGGTTGTTTGGCTCGATCTTGCTAAAAAATTCGAAATCCATTTTACCTTGAGGTACTTGAGATTATCTCCAAGAGTGTCATCTTCTCCATGTGGACGGAGGCAAAAATGTATTTTCCTACCTTACTCAGTACTTTGTCAACTCGTAATTAATTAGACCATAGTCGACTACAATCTTTTCTACGTCTTCGCCCATAAAAAAATGATGTTAACGAACTTGGGATGATGCTATCCATCTAAGACATGTTCTTAACAGTTTTTTGGATCCTCTGCCCCACATGAATAGGCATGTGGTGATAATTTTCTGTGAGTAACAAGCCAACTATCTGCAATTTGCCAGTAACCAGCTTAAACACGAGTATTTCTTACGTCAGTTGCATGAACACCCCTTAAGTTATTACTATCGTTGCAGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTCGAGCACGGGAGCCCTTACAGGTCATTGGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGTAAATATATAAATATCCTACTGGATTTAAATTTTTTCGTATATTTAACGTCGAGTGTCCTTAATCTATTTCTTTTTAGTTTTGCTAGTTACTCAATAGGAAGGTTTTCTCTTTAATCAGTGATTTCTTGGTATGAGAATATTTTTGAAAAATTGGAAAACCAAGCTTGACAATAGCCTACCTAGTTATTAAAATTTCATCACGGCTTGAATCCTGAACTTTGTAGGGTATCTCCAGAGGTCCCTAGTCCTTACTACAGCGGTACTCGTGGGTCCGTTCTGACCCGAGCATTCTCGAAATAGAATTCGTAGTTCTTCGTATTTGTGATTTACACGTGTGGTTTAGTTATAAAATACTTCTACTGCAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATGTAAGTTAAAATATTTTTATGTTAGGTGGTGATTGTACTGACCTTTTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTCGTTGGACGACTTCTCGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTAACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGTACTGAAAAAATTACTCTATGTCGTTAAACGTATTCTACTCACTTTTTTTTGCATCAGTTTGGTTTTCTGGTTAATCTTTACTAACGTGTGTGGGAAACACTCGCACTCTTTATAAACACTAATCGAAAAGAGATTACAAGACACTCTGTAGAATATCTTCAATGGGCTCATACAATTATCGGGTTTGACCCTGTTGGGCTAGTGATGATATTTCAACATATTTTATTCCCTTTCTCTTATGAGTTCTCGCTCTCTCGTCTTTGAGATAACTGCTCGATTATGCCATTCATTAATGTCTTTAATATATGTTCTGAATATGGATATGGGAGGATTTGATATTACTTGCAATGGATATGAATGTTGTGGTTTAGGAAGAGAAGCTAAAGGACAAGCCTGGGTATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGTATGAACAAAACATCTCAATCACCAACAAATCCTCTCATTGTTTTCTCATGGAGCTTTTGTTATTCCAGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCGTTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAGTAGGAACAGTGACTTCCCGACAGCGTCGACGAGAGATGACGAGCTTCGTCGACGCTTTGTTCAAACCATGGAAGCTGGTTTTCATCATTGAATAGCAAGTTAACTTTTGCTGGCTTCACATGGTTAAGAGTTTGGGTGATTTTGCTCAGCTCAATCTGATAGGCCTATGTTAATTGGCCCACCACTTTTTTCCCCTTAATATAGGAGGGAAGGAGAATCCCCTCCACCATTTGAACATTTTTTCGGAGAATCCCCTCCACCATTTGAACATTTTTTC

mRNA sequence

TTGTTTTCTAGTTTATGCATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTATCTTGCTGAATTACTGTCTGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGGTGGGTTTTCAAGATCTCTCTCTACTTTGCATTTTGTTGTTGAAACATCTATTCTTATTTCTTATGCTGACATTAGTGGAATCAATGGTATCTATCAAGTGGAATTCGTTGACTCGAAAGCAAGCAAGCTCAATAATGGTGAAGAAGATGCTAATCATGTTTGGTCAGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTCGAGCACGGGAGCCCTTACAGGTCATTGGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTCGTTGGACGACTTCTCGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTAACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAGCTAAAGGACAAGCCTGGGTATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCGTTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAGTAGGAACAGTGACTTCCCGACAGCGTCGACGAGAGATGACGAGCTTCGTCGACGCTTTGTTCAAACCATGGAAGCTGGTTTTCATCATTGAATAGCAAGTTAACTTTTGCTGGCTTCACATGGTTAAGAGTTTGGGTGATTTTGCTCAGCTCAATCTGATAGGCCTATGTTAATTGGCCCACCACTTTTTTCCCCTTAATATAGGAGGGAAGGAGAATCCCCTCCACCATTTGAACATTTTTTCGGAGAATCCCCTCCACCATTTGAACATTTTTTC

Coding sequence (CDS)

ATGATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCACGCATCTCCTCACAGGACTCCATCCATTCCCTTAGATCGGGAGAGGTATCTTGCTGAATTACTGTCTGAGAGACAGAAATTGGGTCCTTTCGTGCAGGTTTTGCCTCATTGTAGCAGACTTCTGAATCAGGGTGGGTTTTCAAGATCTCTCTCTACTTTGCATTTTGTTGTTGAAACATCTATTCTTATTTCTTATGCTGACATTAGTGGAATCAATGGTATCTATCAAGTGGAATTCGTTGACTCGAAAGCAAGCAAGCTCAATAATGGTGAAGAAGATGCTAATCATGTTTGGTCAGAGATCAGACGTCTATCGGGCCTCAATCAAACTTCCGTGGATCATGAGAGATTCGAGCACGGGAGCCCTTACAGGTCATTGGGCCAGCTATCGAACGGAAGGCCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCACAGTTTGGGGCCCCTTCAAGCTCATTCAATGGCATGGCCGAGGGTTCAAGGAATTCCTACGACACCGATAGTTAAGAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTCGTTGGACGACTTCTCGGACCGCGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTAACAGAATGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAGGATGCTTTAGAGGAAGAGAAGCTAAAGGACAAGCCTGGGTATGAGCATCTTAATGAGCCGTTGCATCTCTTGGTTGAGGCAGAATTCCCAGAGGATACAATAAACTCTCGCTTGGATCATGCAGTGGCTGTGTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAGCTAAGAGAATTGGCATTACTAAATGGCACCCTGAGGGAGGAAAGTCCAAGTATGAGCCCAAGCATGTCTCCGTTTAACACCACGGGGCTCAAACGGGCCAAGACAGGGAGGTAG

Protein sequence

MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
Homology
[Close]
BLAST of Carg00010 vs. NCBI nr
Match: XP_022942905.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_023552162.1 KH domain-containing protein At1g09660/At1g09670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.3 bits (1453), Expect = 2.8e-157
Identity = 290/346 (83.82%), Postives = 290/346 (83.82%), Query Frame = 0 

Query: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60
           MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSE 120
           LNQ                                                        E
Sbjct: 61  LNQ--------------------------------------------------------E 120

Query: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 180
           IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH
Sbjct: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 180

Query: 181 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240
           SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR
Sbjct: 181 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240

Query: 241 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 300
           GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE
Sbjct: 241 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 290

Query: 301 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
Sbjct: 301 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]
BLAST of Carg00010 vs. NCBI nr
Match: XP_022988372.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima])

HSP 1 Score: 563.1 bits (1450), Expect = 6.3e-157
Identity = 289/346 (83.53%), Postives = 290/346 (83.82%), Query Frame = 0 

Query: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60
           MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSE 120
           LNQ                                                        E
Sbjct: 61  LNQ--------------------------------------------------------E 120

Query: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 180
           IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH
Sbjct: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 180

Query: 181 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240
           SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR
Sbjct: 181 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240

Query: 241 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 300
           GKGSIKDALEEEKL+DKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE
Sbjct: 241 GKGSIKDALEEEKLRDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 290

Query: 301 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR
Sbjct: 301 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]
BLAST of Carg00010 vs. NCBI nr
Match: XP_022136599.1 (KH domain-containing protein At1g09660/At1g09670 [Momordica charantia])

HSP 1 Score: 534.3 bits (1375), Expect = 3.2e-148
Identity = 277/346 (80.06%), Postives = 280/346 (80.92%), Query Frame = 0 

Query: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERYLAELLSERQKLGPFVQVLPHCSRL 61
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRERYL ELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60

Query: 62  LNQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSE 121
           LNQ                                                        E
Sbjct: 61  LNQ--------------------------------------------------------E 120

Query: 122 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 181
           IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVH + PLQAH
Sbjct: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAPLQAH 180

Query: 182 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 241
           SM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR
Sbjct: 181 SMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240

Query: 242 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 301
           GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD+AVAVLESLLKPVDE
Sbjct: 241 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLKPVDE 290

Query: 302 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LLDQYKKQQLRELALLNGTLREESPSMS    PFN+TGLKRAKTGR
Sbjct: 301 LLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 290

[Close]
BLAST of Carg00010 vs. NCBI nr
Match: KGN56263.1 (hypothetical protein Csa_3G110600 [Cucumis sativus])

HSP 1 Score: 530.8 bits (1366), Expect = 3.5e-147
Identity = 273/346 (78.90%), Postives = 278/346 (80.35%), Query Frame = 0 

Query: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60
           +MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRL
Sbjct: 110 VMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRL 169

Query: 61  LNQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSE 120
           LNQ                                                        E
Sbjct: 170 LNQ--------------------------------------------------------E 229

Query: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 180
           IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPP     SGHVH +GPLQAH
Sbjct: 230 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXXXSGHVHGMGPLQAH 289

Query: 181 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240
           SM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR
Sbjct: 290 SMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 349

Query: 241 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 300
           GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKPVDE
Sbjct: 350 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKPVDE 399

Query: 301 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LLDQYKKQQLRELALLNGTLREESPSMS    PFN+TGLKRAKTGR
Sbjct: 410 LLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 399

[Close]
BLAST of Carg00010 vs. NCBI nr
Match: XP_004133720.1 (PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242.1 PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis melo])

HSP 1 Score: 530.4 bits (1365), Expect = 4.6e-147
Identity = 273/345 (79.13%), Postives = 277/345 (80.29%), Query Frame = 0 

Query: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 62  NQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEI 121
           NQ                                                        EI
Sbjct: 61  NQ--------------------------------------------------------EI 120

Query: 122 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 181
           RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPP     SGHVH +GPLQAHS
Sbjct: 121 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXXXSGHVHGMGPLQAHS 180

Query: 182 MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 241
           M WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG
Sbjct: 181 MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 240

Query: 242 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 301
           KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKPVDEL
Sbjct: 241 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKPVDEL 289

Query: 302 LDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LDQYKKQQLRELALLNGTLREESPSMS    PFN+TGLKRAKTGR
Sbjct: 301 LDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 289

[Close]
BLAST of Carg00010 vs. TAIR10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 327.0 bits (837), Expect = 1.4e-89
Identity = 176/326 (53.99%), Postives = 212/326 (65.03%), Query Frame = 0 

Query: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 62  NQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEI 121
           N                                                         EI
Sbjct: 71  NH--------------------------------------------------------EI 130

Query: 122 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 181
           RR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P +  S
Sbjct: 131 RRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPFRGPS 190

Query: 182 -MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 241
            + W  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CRV+IR
Sbjct: 191 PVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIR 250

Query: 242 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 301
           G+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLKP+DE
Sbjct: 251 GRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDE 275

Query: 302 LLDQYKKQQLRELALLNGTLREESPS 327
            +D YK++QL+ELA LNGTLREESPS
Sbjct: 311 SMDHYKREQLKELAALNGTLREESPS 275

[Close]
BLAST of Carg00010 vs. TAIR10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 258.5 bits (659), Expect = 6.1e-69
Identity = 156/341 (45.75%), Postives = 195/341 (57.18%), Query Frame = 0 

Query: 10  SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRS 69
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQ      
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQ------ 65

Query: 70  LSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGL-- 129
                                                             EI R++G+  
Sbjct: 66  --------------------------------------------------EIFRITGMMP 125

Query: 130 NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWP 189
           NQ   D +R  H   SP  S   +SN     L GW  +  E  G  H +      +M W 
Sbjct: 126 NQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------AMEWQ 185

Query: 190 RVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSI 249
                P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRGKGSI
Sbjct: 186 GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSI 245

Query: 250 KDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQY 309
           KD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE  D  
Sbjct: 246 KDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYI 283

Query: 310 KKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           K+QQLRELALLN  LRE SP  S S+SPFN+  +KR KTGR
Sbjct: 306 KRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]
BLAST of Carg00010 vs. TAIR10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 257.7 bits (657), Expect = 1.0e-68
Identity = 153/335 (45.67%), Postives = 195/335 (58.21%), Query Frame = 0 

Query: 16  PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRS 75
           PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH  RL+NQ      
Sbjct: 35  PPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQ------ 94

Query: 76  LSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGLNQ 135
                                                             EI R++ L +
Sbjct: 95  --------------------------------------------------EILRVTTLLE 154

Query: 136 TSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQG 195
            ++   RF+H SP  S G   N R  D+ GW   Q      V S     + +  W    G
Sbjct: 155 NALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSVSS-----SPAPNWLNSPG 214

Query: 196 IPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDAL 255
             +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T+CRV IRG+GSIKD +
Sbjct: 215 SSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPI 274

Query: 256 EEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQ 315
           +E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL PV+E  D YKKQQ
Sbjct: 275 KEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQ 306

Query: 316 LRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 345
           LRELALLNG+LREE   MS S+SP+N+ G+KRAKT
Sbjct: 335 LRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]
BLAST of Carg00010 vs. TAIR10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 248.8 bits (634), Expect = 4.8e-66
Identity = 151/337 (44.81%), Postives = 190/337 (56.38%), Query Frame = 0 

Query: 16  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRS 75
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQ      
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQ------ 98

Query: 76  LSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGL-- 135
                                                             EI R++ L  
Sbjct: 99  --------------------------------------------------EILRVTTLLE 158

Query: 136 NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRV 195
           N T +     +H SP  S G   N R  D+ GW            S GP       W   
Sbjct: 159 NATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------NWLNS 218

Query: 196 QGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKD 255
            G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+GSIKD
Sbjct: 219 PGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD 278

Query: 256 ALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKK 315
            ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D YKK
Sbjct: 279 PIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKK 312

Query: 316 QQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 345
           QQLRELALLNGTLREE   MS S+SP+N+ G+KRAKT
Sbjct: 339 QQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]
BLAST of Carg00010 vs. TAIR10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 236.9 bits (603), Expect = 1.9e-62
Identity = 152/339 (44.84%), Postives = 187/339 (55.16%), Query Frame = 0 

Query: 14  YPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRSLSTL 73
           Y  P+  ASP    +  +D  +YL ELL+E QKL PF+QVLP CSRLLNQ          
Sbjct: 10  YFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQ---------- 69

Query: 74  HFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGL--NQTS 133
                                                         E+ R+SG+  NQ  
Sbjct: 70  ----------------------------------------------EMFRVSGMMSNQGF 129

Query: 134 VDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQG 193
            D +R  H   SP  S   +SN     L GW  +  E       L      +M W    G
Sbjct: 130 GDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE------RLSGTPGMTMDWQGAPG 189

Query: 194 IPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDAL 253
            P++  VKR++RL++PVD YPN+NFVGRLLGPRGNSLKRVEA T CRV+IRGKGSIKD  
Sbjct: 190 SPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPE 249

Query: 254 EEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQ 313
           +E+KL+ +PGYEHLNE LH+L+EA+ P   +  RL  A  ++E LLKPVDE  D  K+QQ
Sbjct: 250 KEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQ 285

Query: 314 LRELALLN-GTLREESPSMS--PSMSPFNTTGLKRAKTG 346
           LRELALLN   LREESP  S   S+SPFN++G KR KTG
Sbjct: 310 LRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]
BLAST of Carg00010 vs. Swiss-Prot
Match: sp|Q8GWR3|QKIL5_ARATH (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.5e-88
Identity = 176/326 (53.99%), Postives = 212/326 (65.03%), Query Frame = 0 

Query: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 62  NQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEI 121
           N                                                         EI
Sbjct: 71  NH--------------------------------------------------------EI 130

Query: 122 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 181
           RR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+    P +  S
Sbjct: 131 RRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPFRGPS 190

Query: 182 -MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 241
            + W  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T CRV+IR
Sbjct: 191 PVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIR 250

Query: 242 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 301
           G+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLLKP+DE
Sbjct: 251 GRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDE 275

Query: 302 LLDQYKKQQLRELALLNGTLREESPS 327
            +D YK++QL+ELA LNGTLREESPS
Sbjct: 311 SMDHYKREQLKELAALNGTLREESPS 275

[Close]
BLAST of Carg00010 vs. Swiss-Prot
Match: sp|Q8GYR4|QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.1e-67
Identity = 156/341 (45.75%), Postives = 195/341 (57.18%), Query Frame = 0 

Query: 10  SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRS 69
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQ      
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQ------ 65

Query: 70  LSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGL-- 129
                                                             EI R++G+  
Sbjct: 66  --------------------------------------------------EIFRITGMMP 125

Query: 130 NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWP 189
           NQ   D +R  H   SP  S   +SN     L GW  +  E  G  H +      +M W 
Sbjct: 126 NQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------AMEWQ 185

Query: 190 RVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSI 249
                P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIRGKGSI
Sbjct: 186 GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSI 245

Query: 250 KDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQY 309
           KD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE  D  
Sbjct: 246 KDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYI 283

Query: 310 KKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           K+QQLRELALLN  LRE SP  S S+SPFN+  +KR KTGR
Sbjct: 306 KRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]
BLAST of Carg00010 vs. Swiss-Prot
Match: sp|Q0WLR1|QKIL1_ARATH (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.9e-67
Identity = 153/335 (45.67%), Postives = 195/335 (58.21%), Query Frame = 0 

Query: 16  PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRS 75
           PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH  RL+NQ      
Sbjct: 35  PPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQ------ 94

Query: 76  LSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGLNQ 135
                                                             EI R++ L +
Sbjct: 95  --------------------------------------------------EILRVTTLLE 154

Query: 136 TSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQG 195
            ++   RF+H SP  S G   N R  D+ GW   Q      V S     + +  W    G
Sbjct: 155 NALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSVSS-----SPAPNWLNSPG 214

Query: 196 IPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDAL 255
             +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T+CRV IRG+GSIKD +
Sbjct: 215 SSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPI 274

Query: 256 EEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQ 315
           +E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL PV+E  D YKKQQ
Sbjct: 275 KEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQ 306

Query: 316 LRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 345
           LRELALLNG+LREE   MS S+SP+N+ G+KRAKT
Sbjct: 335 LRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]
BLAST of Carg00010 vs. Swiss-Prot
Match: sp|Q75GR5|SPIN1_ORYSJ (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.8e-66
Identity = 154/331 (46.53%), Postives = 195/331 (58.91%), Query Frame = 0 

Query: 17  PSAHASPHRTPSIPLDRE-RYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRSLSTLHF 76
           P+ + SP +  S P D + +YLAELL+E QKLGPF+QVLP CS+LL+Q            
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQ------------ 70

Query: 77  VVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGLNQTSVDHE 136
                      +I  ++ I                    NH + +            D  
Sbjct: 71  -----------EIMRVSSIVH------------------NHGFGDF-----------DRH 130

Query: 137 RFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRVQGIPTTPI 196
           RF   SP  S    SN        W  +      H   LG  Q  SM W      P++ +
Sbjct: 131 RFRSPSPMSSPNPRSNRSGNGFSPWNGL------HQERLGFPQGTSMDWQGAPPSPSSHV 190

Query: 197 VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLK 256
           VK+++RLDVPVD YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRGKGSIKD  +E+KL+
Sbjct: 191 VKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLR 250

Query: 257 DKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELAL 316
            KPGYEHL++PLH+L+EAEFP   I++RL HA  V+E LLKPVDE  D YK+QQLRELA+
Sbjct: 251 GKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAM 281

Query: 317 LNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LN TLRE+SP    S+SPF+  G+KRAKTG+
Sbjct: 311 LNSTLREDSPHPG-SVSPFSNGGMKRAKTGQ 281

[Close]
BLAST of Carg00010 vs. Swiss-Prot
Match: sp|Q9FKT4|QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.6e-65
Identity = 151/337 (44.81%), Postives = 190/337 (56.38%), Query Frame = 0 

Query: 16  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQGGFSRS 75
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQ      
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQ------ 98

Query: 76  LSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEIRRLSGL-- 135
                                                             EI R++ L  
Sbjct: 99  --------------------------------------------------EILRVTTLLE 158

Query: 136 NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHSMAWPRV 195
           N T +     +H SP  S G   N R  D+ GW            S GP       W   
Sbjct: 159 NATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------NWLNS 218

Query: 196 QGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKD 255
            G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+GSIKD
Sbjct: 219 PGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKD 278

Query: 256 ALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKK 315
            ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D YKK
Sbjct: 279 PIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKK 312

Query: 316 QQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKT 345
           QQLRELALLNGTLREE   MS S+SP+N+ G+KRAKT
Sbjct: 339 QQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]
BLAST of Carg00010 vs. TrEMBL
Match: tr|A0A0A0L3B7|A0A0A0L3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 2.3e-147
Identity = 273/346 (78.90%), Postives = 278/346 (80.35%), Query Frame = 0 

Query: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60
           +MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRL
Sbjct: 110 VMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRL 169

Query: 61  LNQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSE 120
           LNQ                                                        E
Sbjct: 170 LNQ--------------------------------------------------------E 229

Query: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 180
           IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPP     SGHVH +GPLQAH
Sbjct: 230 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXXXSGHVHGMGPLQAH 289

Query: 181 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240
           SM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR
Sbjct: 290 SMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 349

Query: 241 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 300
           GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKPVDE
Sbjct: 350 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKPVDE 399

Query: 301 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LLDQYKKQQLRELALLNGTLREESPSMS    PFN+TGLKRAKTGR
Sbjct: 410 LLDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 399

[Close]
BLAST of Carg00010 vs. TrEMBL
Match: tr|A0A1S3BST0|A0A1S3BST0_CUCME (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 3.0e-147
Identity = 273/345 (79.13%), Postives = 277/345 (80.29%), Query Frame = 0 

Query: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 62  NQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEI 121
           NQ                                                        EI
Sbjct: 61  NQ--------------------------------------------------------EI 120

Query: 122 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 181
           RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPP     SGHVH +GPLQAHS
Sbjct: 121 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPXXXXXSGHVHGMGPLQAHS 180

Query: 182 MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 241
           M WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG
Sbjct: 181 MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 240

Query: 242 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 301
           KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLKPVDEL
Sbjct: 241 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLKPVDEL 289

Query: 302 LDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 347
           LDQYKKQQLRELALLNGTLREESPSMS    PFN+TGLKRAKTGR
Sbjct: 301 LDQYKKQQLRELALLNGTLREESPSMSXXXXPFNSTGLKRAKTGR 289

[Close]
BLAST of Carg00010 vs. TrEMBL
Match: tr|A0A251RK07|A0A251RK07_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.1e-116
Identity = 219/350 (62.57%), Postives = 252/350 (72.00%), Query Frame = 0 

Query: 1   MMGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRL 60
           +MGER P GSYF YPPP  HASPHR+ S+P+DRERYLAELL+E+QKLGPF+Q+LP CSRL
Sbjct: 24  VMGERIPSGSYFQYPPPGVHASPHRS-SLPVDRERYLAELLAEKQKLGPFMQILPLCSRL 83

Query: 61  LNQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSE 120
           LN                                                         E
Sbjct: 84  LNH--------------------------------------------------------E 143

Query: 121 IRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAH 180
           IRR+SG NQT VDHER EH SP+R+L Q +NGRPMDLEGWP MQME +GH+  + P Q+ 
Sbjct: 144 IRRVSGFNQTLVDHERLEHESPFRTLSQNANGRPMDLEGWPGMQMEENGHIQRMAPFQSP 203

Query: 181 SMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 240
           SM WP VQGIP TP+VKRV+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVEA+TECRVYIR
Sbjct: 204 SMGWPGVQGIPATPVVKRVIRLDVPVDKYPHYNFVGRILGPRGNSLKRVEAMTECRVYIR 263

Query: 241 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDE 300
           G+GS+KD+++EEKLK+KPGYEHLNEPLH+LVEAEFPED IN+RLDHAVA+LE+LLKPVDE
Sbjct: 264 GRGSVKDSVKEEKLKEKPGYEHLNEPLHVLVEAEFPEDIINARLDHAVAILENLLKPVDE 316

Query: 301 LLDQYKKQQLRELALLNGTLREESPS----MSPSMSPFNTTGLKRAKTGR 347
             D YKKQQLRELA+LNGTLREESPS              TG+KRAKTGR
Sbjct: 324 SFDHYKKQQLRELAMLNGTLREESPSXXXXXXXXXXXXXXTGMKRAKTGR 316

[Close]
BLAST of Carg00010 vs. TrEMBL
Match: tr|M5XN70|M5XN70_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 2.7e-116
Identity = 219/349 (62.75%), Postives = 251/349 (71.92%), Query Frame = 0 

Query: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61
           MGER P GSYF YPPP  HASPHR+ S+P+DRERYLAELL+E+QKLGPF+Q+LP CSRLL
Sbjct: 1   MGERIPSGSYFQYPPPGVHASPHRS-SLPVDRERYLAELLAEKQKLGPFMQILPLCSRLL 60

Query: 62  NQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEI 121
           N                                                         EI
Sbjct: 61  NH--------------------------------------------------------EI 120

Query: 122 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 181
           RR+SG NQT VDHER EH SP+R+L Q +NGRPMDLEGWP MQME +GH+  + P Q+ S
Sbjct: 121 RRVSGFNQTLVDHERLEHESPFRTLSQNANGRPMDLEGWPGMQMEENGHIQRMAPFQSPS 180

Query: 182 MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 241
           M WP VQGIP TP+VKRV+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVEA+TECRVYIRG
Sbjct: 181 MGWPGVQGIPATPVVKRVIRLDVPVDKYPHYNFVGRILGPRGNSLKRVEAMTECRVYIRG 240

Query: 242 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 301
           +GS+KD+++EEKLK+KPGYEHLNEPLH+LVEAEFPED IN+RLDHAVA+LE+LLKPVDE 
Sbjct: 241 RGSVKDSVKEEKLKEKPGYEHLNEPLHVLVEAEFPEDIINARLDHAVAILENLLKPVDES 292

Query: 302 LDQYKKQQLRELALLNGTLREESPS----MSPSMSPFNTTGLKRAKTGR 347
            D YKKQQLRELA+LNGTLREESPS              TG+KRAKTGR
Sbjct: 301 FDHYKKQQLRELAMLNGTLREESPSXXXXXXXXXXXXXXTGMKRAKTGR 292

[Close]
BLAST of Carg00010 vs. TrEMBL
Match: tr|A0A2P4KVQ8|A0A2P4KVQ8_QUESU (Kh domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_62634 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.0e-115
Identity = 221/349 (63.32%), Postives = 248/349 (71.06%), Query Frame = 0 

Query: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 61
           MGER PPGSYF YPPP   ASP R+ SIP DRERY+AELL+E+QKLGPF+QVLP CSRLL
Sbjct: 1   MGERIPPGSYFQYPPPGVPASPIRSASIPTDRERYMAELLAEKQKLGPFMQVLPMCSRLL 60

Query: 62  NQGGFSRSLSTLHFVVETSILISYADISGINGIYQVEFVDSKASKLNNGEEDANHVWSEI 121
           NQ                                                        EI
Sbjct: 61  NQ--------------------------------------------------------EI 120

Query: 122 RRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGPLQAHS 181
           RR+SG NQ+ VDHER EH SP RS GQ  NGR MDLEGWP MQME +GH+  + PLQ  S
Sbjct: 121 RRVSGFNQSFVDHERLEHESPLRSFGQPPNGRAMDLEGWPAMQMEENGHIQRMTPLQTPS 180

Query: 182 MAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRG 241
           M WP VQGIPTTP+VKRV+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVEA+TECRVYIRG
Sbjct: 181 MGWPGVQGIPTTPVVKRVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVEAMTECRVYIRG 240

Query: 242 KGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDEL 301
           +GS+KDA++EEKLKDKPGYEHLNEPLH+LVEAEFPED IN+RLD+A+ +LE+LLKPVDE 
Sbjct: 241 RGSVKDAVKEEKLKDKPGYEHLNEPLHVLVEAEFPEDVINARLDYAMTILENLLKPVDES 293

Query: 302 LDQYKKQQLRELALLNGTLREESPS----MSPSMSPFNTTGLKRAKTGR 347
           LD YKKQQLRELA+LNGTLREESPS              TG+KRAKTGR
Sbjct: 301 LDHYKKQQLRELAMLNGTLREESPSXXXXXXXXXXXXXXTGMKRAKTGR 293

The following BLAST results are available for this feature:
BLAST of Carg00010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942905.12.8e-15783.82KH domain-containing protein At1g09660/At1g09670-like [Cucurbita moschata] >XP_0... [more]
XP_022988372.16.3e-15783.53KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima][more]
XP_022136599.13.2e-14880.06KH domain-containing protein At1g09660/At1g09670 [Momordica charantia][more]
KGN56263.13.5e-14778.90hypothetical protein Csa_3G110600 [Cucumis sativus][more]
XP_004133720.14.6e-14779.13PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >X... [more]
BLAST of Carg00010 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09660.11.4e-8953.99RNA-binding KH domain-containing protein[more]
AT3G08620.16.1e-6945.75RNA-binding KH domain-containing protein[more]
AT4G26480.11.0e-6845.67RNA-binding KH domain-containing protein[more]
AT5G56140.14.8e-6644.81RNA-binding KH domain-containing protein[more]
AT2G38610.11.9e-6244.84RNA-binding KH domain-containing protein[more]
BLAST of Carg00010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GWR3|QKIL5_ARATH2.5e-8853.99KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q8GYR4|QKIL4_ARATH1.1e-6745.75KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08... [more]
sp|Q0WLR1|QKIL1_ARATH1.9e-6745.67KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26... [more]
sp|Q75GR5|SPIN1_ORYSJ7.8e-6646.53KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
sp|Q9FKT4|QKIL2_ARATH8.6e-6544.81KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56... [more]
BLAST of Carg00010 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3B7|A0A0A0L3B7_CUCSA2.3e-14778.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1[more]
tr|A0A1S3BST0|A0A1S3BST0_CUCME3.0e-14779.13KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1... [more]
tr|A0A251RK07|A0A251RK07_PRUPE2.1e-11662.57Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1[more]
tr|M5XN70|M5XN70_PRUPE2.7e-11662.75Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G581200 PE=4 SV=1[more]
tr|A0A2P4KVQ8|A0A2P4KVQ8_QUESU1.0e-11563.32Kh domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_62634 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR032377STAR_dimer
IPR004087KH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00010-RACarg00010-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 196..296
e-value: 0.0017
score: 27.6
IPR032377STAR protein, homodimerisation regionPFAMPF16544STAR_dimercoord: 35..63
e-value: 3.7E-7
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..346
NoneNo IPR availablePANTHERPTHR11208:SF48SUBFAMILY NOT NAMEDcoord: 2..66
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 2..66
NoneNo IPR availablePANTHERPTHR11208:SF48SUBFAMILY NOT NAMEDcoord: 119..346
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 119..346
NoneNo IPR availableCDDcd02395SF1_like-KHcoord: 201..321
e-value: 3.18891E-50
score: 164.724
IPR036612K Homology domain, type 1 superfamilySUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 202..321