CmaCh04G008890 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G008890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	COX assembly mitochondrial protein 2
Location	Cma_Chr04 : 4626355 .. 4629111 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACGAAAGCTGGCCGTTCTCAATTCGGGATCAGATTTTTCATGCTTTTCACAGGTTGGGGGTTTCTTGATTTGAATCTTCTTCTTATTCATCGATTTAATTCATATGCGTTTTTGTAGATCGTCAGTTCTAAAATAGCACTGATTCTATGGCCAAAAATAATCGTAGTGATTCTCCGGAAGTGGATATGAAAACCCTATATTTCGATTGAAATTGTATAACCGCTAATGGATTTGCTTAGATAATAGTTTGAATCGGAATCTTAAACAGACGCATCCATTCTCTTCTCTCTGAAATGAAATCGATGCAATGATTGTTTGGTTTCTGAAGACGATTTTGGGTTTTATATGAACTACCTTGTTGCAGGTTGCTGCGGATTTCGCAAGTGAATATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAGTGAGTTCGAAACTATGTTTTCTTAATATATATATATATATAGTTGAATTCCTCGAGATGGTTGGACGTGACCTTCATTTCACTTTCGATTTTTTTTATTATGCTGTATCCTTTCAAGAAAGAAAATCTTAGCTTGAACTCCAGGTACCCTTCTTGAATTCGCACACCCATTCTAATGATGAATTCAAGTCACCTCTATTTAATGAAGGGCTGAACAATTGACATCTCATTCAGTTTTATGCTGATGGAATTCAAATGATGAGTCTGGAGTTGTAATTAGTTGAACCGTGTTTGTTAAGTTATTCAAATCTTTTGGGTTTCTTAACAACCAAATGTTGTATAGAGTTAGAGGTCGAGTTAGAGCAAGGAAATCTTCCAGTAGTTTACTAAAGCCCAAAATTCCCTACTGTTATGTGATTTAGTTACCGGAAACCAGTTTTTAAAAACTATAATTTTCCTGCTCTCCTCTTTCCATCACTTGTACAGATTATTGAGGAGTTTCAGAAGTGTCATCTAGACCATCCCATTGCAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAGTGAGTTTTGTGTTTCTACATTCTAGTTTTCCTTCGTTTCTTTTGTAGACCTGCTCCTTTTTCCATCTCAAATGACACTTTCTATTTCTTTTCACAGAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGAAGTAGTTAGGATATGGCACTCATGGAAAGTGTTTCAAGACGAAACATTTAACTAATAAGACATCGAGATTGGGAAGATGTGTAAATTCATTACAGAAATCTAGAAATTTGTTGCCAGTTTCAATGGTTGAGGACTTTGAATGACACTCCAGAGTGTGGAAGAGAGAAATTTTAGTTCCAACACAAAACTTGTAGATTGTGAAGCTGGTGTCGAGCAAAACTGCAGTTTGGGTTGTGAAATTCAATATTTATAAGGCTGTTCTCATATGGGAATATACTTTGTATGCTTGAAAACTGGCCATAAATATAATCTTAATCATGTTTAGTTGACATATTTCTGATCTCCAGCTATAATTGTGTCGAGACGAATGCGAAAGATTTGCCCCTTGCATACAATTTCTCAAGAATCGTCTGAGGTAATCTTTTCTCTATGTTTAATCCATTTTGCAATACTTATGTTGGTAATTTGATCATTGAAATATTAAAAGATTTTCCCCTTCTTGCCTATAAGGTTTCTTTTCTTTGAAACTCTATTACATCATGAATCTGTTTTAAATCTGGCTAAAAATCTTTGCTGTAGTGCTCTTACTAAAAAAGATCTCTTGCTATCATCAGATTATGCAACATTGGCATATTTAATATTTCTTTTGAAGGCGACGGAGAAAATTTTAGACAAAGATTCAAATGTGTAATGGTTCCTAGGCTATACATAAAAGACTAATTCTGATTCCCAGGTTTCACATGAAAGGATTTGTTTCTTATAAAAAAGAGGTTCCATTGGAAGCACTAGGCAGCAACTGTTTCTGCACTACCGTATATGATTCTAACTGTACAGTAGTTTTGTATCAACAGGCATTGAGTTGGTTGATACAAAAGTACCCAAAATCTATTCAGGGAAAAACAACCTAATGGCATCGCTCAAAGGGATGCCCTCTTGCGAGCTCTGACCATTCTTCCAAACTTTACATTTCAACTCAAATGAGCTTCGGTCCCTCCATTGCTTCAGTAATGACAGTGGCAAGGGTCCCCTTGTCTCCCCTTGAGGACTTGCACAATACCACAGGGAGAAATTTGGATTCTCTGAAGTCTGCATTTTATCTTCAGCTTTCAAATCCTCGTTATCGCTTAGCTCGATCAACTCTACATCAGAAGCCCTTTTGCTTTTGAACTTTGATTTCTGAATATTGATATACTCACTTTGCCTTTTGATGCTGGAAAGCAATGGTTTGGAATATGCATGTTTCTTTGGTAGAATGGATTGATGCTGCTCTTTATGAGGTTGAAATTCTGCAGCTGAGACGCATGATTTTTTAGCAAAACCTTTACAAGTAGAGACCTCGAAGTGTTGCTGCTTCTCTGAAATGGTTTGCATGCCAATCAAACATTCTTCTACCATGGCAGCTGAAGATCAAGTCAGAAAATAAAGCATAGTTTGTCAAAATATTGATCCTCGATGCTAATTAGAACATAGATGGTAAATACGCACTTGAAATAAAAGGGGAACTACTTTTGTTCTCAATCACGTTGCGCACTCATTCAGTATCTA

mRNA sequence

AGAACGAAAGCTGGCCGTTCTCAATTCGGGATCAGATTTTTCATGCTTTTCACAGGTTGCTGCGGATTTCGCAAGTGAATATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAATTATTGAGGAGTTTCAGAAGTGTCATCTAGACCATCCCATTGCAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGAAGTAGTTAGGATATGGCACTCATGGAAAGTGTTTCAAGACGAAACATTTAACTAATAAGACATCGAGATTGGGAAGATGTGTAAATTCATTACAGAAATCTAGAAATTTGTTGCCAGTTTCAATGGTTGAGGACTTTGAATGACACTCCAGAGTGTGGAAGAGAGAAATTTTAGTTCCAACACAAAACTTGTAGATTGTGAAGCTGGTGTCGAGCAAAACTGCAGTTTGGGTTGTGAAATTCAATATTTATAAGGCTGTTCTCATATGGGAATATACTTTGTATGCTTGAAAACTGGCCATAAATATAATCTTAATCATGTTTAGTTGACATATTTCTGATCTCCAGCTATAATTGTGTCGAGACGAATGCGAAAGATTTGCCCCTTGCATACAATTTCTCAAGAATCGTCTGAGGTTTCACATGAAAGGATTTGTTTCTTATAAAAAAGAGGTTCCATTGGAAGCACTAGGCAGCAACTGTTTCTGCACTACCGTATATGATTCTAACTGTACAGTAGTTTTGTATCAACAGGCATTGAGTTGGTTGATACAAAAGTACCCAAAATCTATTCAGGGAAAAACAACCTAATGGCATCGCTCAAAGGGATGCCCTCTTGCGAGCTCTGACCATTCTTCCAAACTTTACATTTCAACTCAAATGAGCTTCGGTCCCTCCATTGCTTCAGTAATGACAGTGGCAAGGGTCCCCTTGTCTCCCCTTGAGGACTTGCACAATACCACAGGGAGAAATTTGGATTCTCTGAAGTCTGCATTTTATCTTCAGCTTTCAAATCCTCGTTATCGCTTAGCTCGATCAACTCTACATCAGAAGCCCTTTTGCTTTTGAACTTTGATTTCTGAATATTGATATACTCACTTTGCCTTTTGATGCTGGAAAGCAATGGTTTGGAATATGCATGTTTCTTTGGTAGAATGGATTGATGCTGCTCTTTATGAGGTTGAAATTCTGCAGCTGAGACGCATGATTTTTTAGCAAAACCTTTACAAGTAGAGACCTCGAAGTGTTGCTGCTTCTCTGAAATGGTTTGCATGCCAATCAAACATTCTTCTACCATGGCAGCTGAAGATCAAGTCAGAAAATAAAGCATAGTTTGTCAAAATATTGATCCTCGATGCTAATTAGAACATAGATGGTAAATACGCACTTGAAATAAAAGGGGAACTACTTTTGTTCTCAATCACGTTGCGCACTCATTCAGTATCTA

Coding sequence (CDS)

ATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAATTATTGAGGAGTTTCAGAAGTGTCATCTAGACCATCCCATTGCAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGA

Protein sequence

MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL

Homology

[Close]

BLAST of CmaCh04G008890 vs. TrEMBL
Match: A0A0B0MZA9_GOSAR (Putative C16orf61 OS=Gossypium arboreum GN=F383_34011 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.7e-33
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLH+HPMCAEIIEEFQKCHL+HPIAKF GECT+LKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHRHPMCAEIIEEFQKCHLEHPIAKFFGECTELKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          QSKK+KERL ALRKE A
Sbjct: 61 QSKKLKERLQALRKETA 77

[Close]

BLAST of CmaCh04G008890 vs. TrEMBL
Match: A0A0B2PM56_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032174 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-32
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCH++HPIAKF GECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

[Close]

BLAST of CmaCh04G008890 vs. TrEMBL
Match: I1LM57_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G208400 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-32
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCH++HPIAKF GECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

[Close]

BLAST of CmaCh04G008890 vs. TrEMBL
Match: I1MZJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G045400 PE=4 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-32
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCH++HPIAKF GECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

[Close]

BLAST of CmaCh04G008890 vs. TrEMBL
Match: A0A061E4Y0_THECC (Cytochrome c oxidase biogenesis protein Cmc1-like isoform 1 OS=Theobroma cacao GN=TCM_006383 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.5e-32
Identity = 69/77 (89.61%), Postives = 73/77 (94.81%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLH+HPMCAEIIE+FQKCH DHPIAKF GECT+LKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHRHPMCAEIIEQFQKCHSDHPIAKFFGECTELKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          QSKK+KERL ALRKE A
Sbjct: 61 QSKKLKERLQALRKETA 77

[Close]

BLAST of CmaCh04G008890 vs. TAIR10
Match: AT4G21192.1 (AT4G21192.1 Cytochrome c oxidase biogenesis protein Cmc1-like)

HSP 1 Score: 135.2 bits (339), Expect = 1.7e-32
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLT H+HPMC EIIEEFQKCH+DHPI KF GECT+LK+KLDRCFRQEKA+KRK NFE
Sbjct: 1  MHPPLTPHRHPMCLEIIEEFQKCHIDHPIGKFFGECTELKVKLDRCFRQEKAVKRKVNFE 60

Query: 61 QSKKMKERLDALRKE 76
          QSKK++ERL A+RKE
Sbjct: 61 QSKKLQERLKAIRKE 75

[Close]

BLAST of CmaCh04G008890 vs. NCBI nr
Match: gi|449431882|ref|XP_004133729.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 3.5e-35
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCH+DHP+ KF GECTDLKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIDHPVGKFFGECTDLKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENAL 79
          QSKKMKERLDALRKENAL
Sbjct: 61 QSKKMKERLDALRKENAL 78

[Close]

BLAST of CmaCh04G008890 vs. NCBI nr
Match: gi|659102624|ref|XP_008452227.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis melo])

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCH+DHP+ KF GECTDLKIKLD+CFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIDHPVGKFFGECTDLKIKLDQCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENAL 79
          QSKKMKERLDALRKENAL
Sbjct: 61 QSKKMKERLDALRKENAL 78

[Close]

BLAST of CmaCh04G008890 vs. NCBI nr
Match: gi|728827994|gb|KHG07448.1| (putative C16orf61 [Gossypium arboreum])

HSP 1 Score: 147.5 bits (371), Expect = 9.6e-33
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLH+HPMCAEIIEEFQKCHL+HPIAKF GECT+LKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHRHPMCAEIIEEFQKCHLEHPIAKFFGECTELKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          QSKK+KERL ALRKE A
Sbjct: 61 QSKKLKERLQALRKETA 77

[Close]

BLAST of CmaCh04G008890 vs. NCBI nr
Match: gi|356569859|ref|XP_003553112.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Glycine max])

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-32
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCH++HPIAKF GECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

[Close]

BLAST of CmaCh04G008890 vs. NCBI nr
Match: gi|356539767|ref|XP_003538365.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Glycine max])

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-32
Identity = 68/77 (88.31%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHLDHPIAKFLGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCH++HPIAKF GECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

The following BLAST results are available for this feature:

BLAST of CmaCh04G008890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G008890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B0MZA9_GOSAR	6.7e-33	90.91	Putative C16orf61 OS=Gossypium arboreum GN=F383_34011 PE=4 SV=1	[more]
A0A0B2PM56_GLYSO	2.0e-32	88.31	Uncharacterized protein OS=Glycine soja GN=glysoja_032174 PE=4 SV=1	[more]
I1LM57_SOYBN	2.0e-32	88.31	Uncharacterized protein OS=Glycine max GN=GLYMA_11G208400 PE=4 SV=1	[more]
I1MZJ5_SOYBN	2.0e-32	88.31	Uncharacterized protein OS=Glycine max GN=GLYMA_18G045400 PE=4 SV=2	[more]
A0A061E4Y0_THECC	2.5e-32	89.61	Cytochrome c oxidase biogenesis protein Cmc1-like isoform 1 OS=Theobroma cacao G...	[more]

BLAST of CmaCh04G008890 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21192.1	1.7e-32	81.33	Cytochrome c oxidase biogenesis protein Cmc1-like	[more]

BLAST of CmaCh04G008890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431882\|ref\|XP_004133729.1\|	3.5e-35	93.59	PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis sativus]	[more]
gi\|659102624\|ref\|XP_008452227.1\|	1.0e-34	92.31	PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis melo]	[more]
gi\|728827994\|gb\|KHG07448.1\|	9.6e-33	90.91	putative C16orf61 [Gossypium arboreum]	[more]
gi\|356569859\|ref\|XP_003553112.1\|	2.8e-32	88.31	PREDICTED: COX assembly mitochondrial protein 2 homolog [Glycine max]	[more]
gi\|356539767\|ref\|XP_003538365.1\|	2.8e-32	88.31	PREDICTED: COX assembly mitochondrial protein 2 homolog [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013892	Cyt_c_biogenesis_Cmc1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G008890.1	CmaCh04G008890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PFAM	PF08583	Cmc1	coord: 1..69 score: 1.8
None	No IPR available	PANTHER	PTHR22977	UPF0287 FAMILY	coord: 1..75 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G008890	Cucsa.114320	Cucumber (Gy14) v1	cgycmaB0277
CmaCh04G008890	Cla011826	Watermelon (97103) v1	cmawmB680
CmaCh04G008890	Csa3G110700	Cucumber (Chinese Long) v2	cmacuB702
CmaCh04G008890	ClCG10G007340	Watermelon (Charleston Gray)	cmawcgB614
CmaCh04G008890	CmoCh04G009520	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G008890	Lsi05G007220	Bottle gourd (USVL1VR-Ls)	cmalsiB687
CmaCh04G008890	Cp4.1LG01g08730	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G008890	MELO3C032219.2	Melon (DHL92) v3.6.1	cmamedB778
CmaCh04G008890	CsaV3_3G006580	Cucumber (Chinese Long) v3	cmacucB0837
CmaCh04G008890	Cla97C10G191030	Watermelon (97103) v2	cmawmbB718
CmaCh04G008890	Bhi11G000672	Wax gourd	cmawgoB0823
CmaCh04G008890	Carg00003	Silver-seed gourd	carcmaB0948

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G008890	Wax gourd	cmawgoB0826
CmaCh04G008890	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh04G008890	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G008890	Wild cucumber (PI 183967)	cmacpiB710
CmaCh04G008890	Melon (DHL92) v3.5.1	cmameB689
CmaCh04G008890	Cucurbita pepo (Zucchini)	cmacpeB714
CmaCh04G008890	Cucumber (Gy14) v2	cgybcmaB416
CmaCh04G008890	Silver-seed gourd	carcmaB0783