ClCG10G007340 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G007340
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	COX assembly mitochondrial protein-like protein
Location	CG_Chr10 : 10608826 .. 10610995 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAGTTAGAATATCTTTCTTTCTGGATTTGAATCAAGATTAAATAAGCTTACAGCTAGAAGACCACGCGGTGGCTCAAGTTATTTATTTGCCCTTACTGGTTTGATTTCTTGATTTGAATCTCTATTTGTTTATCAATTTAATTCATATACGTTTTTGTAGTTCTTTCGGTTAAAATCGCACTGATTCTTCGAATTTGGATACGAAAACCCTACATTCTGATTGAAATAGTATAACCTTCTAATGGGTTGGCCAATATATTAGTTTGAATCGGAACCTTAAACATCCGCATCCATTCTCTTCTCTCTGACACGAAATCGATGCAATGGTTGTGGTTTCTGAAGTTGATTTTGGGTTTTCTGTGAACTATTCTTGATTCAGGTTGCTGGGGATTTCATAACTGAATATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAGTGAGTTCGAATCTATACCTTCCTAATGTGTATAATTGAATTCCTGTAGATGATTGACTTGATCTTCATTTCATTTTTGAACCTTTCGTTTATGAATCAATTCGGTTGTTGTCTTGCAAGAAAGTGGGGAAAAAATGGTGTAAATACTACTTTGTTCCATATACTGACTTTGGTTCATTTTGGTTTTTTACTTTCAAAATGTTAACTTTCAATTTTAGTTCATTTTAGTCCCTATGCTTACAAAAGGTATACTTTTTACTTTTGACTCAATTTGGTCCTTATACTTTAAAAAGGTGACTATTTTGGTCCTTTTATTTTAATTTTTATTTATTTTTAAGTGATTAGAATAACCACTTTTTGAAAGTTCAAAGATCAAAATGAACAAAAGTTGAAATATAGGGACAATTAAACCAAATCAACTAAATCAAAAGTACAGGGACCAAAGTGTATTTAGACAAAAAAAAAATCATATGGTGAAGCCTAGATTACCTCTTTTAACGTCATATTCAAGTAAACTCTATTCAATCAAGCTCAGAATTATTGACATTTAATTCAGGTTTATACTGATGAAAATCATATGATGAGTCATGGAGGTATAATTAATGCATACTTGGGAGTGATCAATTTAGTGTTTAATTTTACACTTTTAAGTGCAATTTTTATATATCAAAATTGATTTTGAATTGTTAAAAACATATTTTGGTGTGATTTTGAAAATGGCGAAGGTGATTTTAACAATTTTATAATCACTCCCAAACATGTCTTTAGTTGAACCGTGATTCATAGGTGGAACAGTGTAGTGAACAACTGCTATGAAATTGCTGTAGGAGCTCAATTTTATCTACTAACTAGCAAGTAAGAAGCATATTGCTTCCTTTCCACTCAAAGTGAAGAGAATGTCTACAGATTTCCTTGGTGTTCACCATTTGAGTTTGAGTTTCTTAACAACGAAATGTCGTAGAGTTAGGTTGTAAGCTAGCCTAAATACTTGCATATTAGGGAAAGAAAAGGTAAGAGAATCTTTTCGTAGTTTACTAAAGCCCAAACTTCCCCATTATTATGCAGTTTTGTCAATGGAAACTTTTTTCTAAAAACTATTATTTTCCTTCATCTTCTCTTCCATCACTTACAGATTATCGAGGAGTTTCAGAAGTGTCATATAGACCATCCTGTTGCAAAATTTTTCGGTGAATGCACAGATCTCAAAATCAAGCTCGATCGATGTTTCAGGCAGGAGGTGAGTTCTGTGCTTCCACATTCGTGTTTTCCTTGCTTTGTCTTCAACTTCCCCTGCTCCTTTTTTGTCATCTCAAATGGCACTTTCTATTCTTTGTTTACAGAAAGCTTTGAAACGAAAGGCAAACTTTGAACAGAGTAAAAAAATGAAGGAAAGGCTAGACGCTTTAAGAAAGGAAAACGCTTTACGAAGTAGCTAGTGTATGTGCTTTCATGGAAAATGTTTCAAGAGGAAGCATTTAACTAATCAAACAACCAAGATTGGGAAGACATGTAAATTCATTACCAGCTATCAAGAAATTTGTTGCCAGTTTCAATGGTTGGAGGACTTGAATGACTACGGACTGTGGAAGAGATAGAAATTGTAGTGTGAACACCAAACTTGTAGATTGCGAAGATGATGATGTTGAGCAGTACTGCAGTTTGGGTTTGGATATTCGATATTTACGACGCTGTTTAGATGTCTATGCTTTGGATGCTTGA

mRNA sequence

AGCAGTTAGAATATCTTTCTTTCTGGATTTGAATCAAGATTAAATAAGCTTACAGCTAGAAGACCACGCGGTGGCTCAAGTTATTTATTTGCCCTTACTGGTTGCTGGGGATTTCATAACTGAATATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAATTATCGAGGAGTTTCAGAAGTGTCATATAGACCATCCTGTTGCAAAATTTTTCGGTGAATGCACAGATCTCAAAATCAAGCTCGATCGATGTTTCAGGCAGGAGAAAGCTTTGAAACGAAAGGCAAACTTTGAACAGAGTAAAAAAATGAAGGAAAGGCTAGACGCTTTAAGAAAGGAAAACGCTTTACGAAATTGCGAAGATGATGATGTTGAGCAGTACTGCAGTTTGGGTTTGGATATTCGATATTTACGACGCTGTTTAGATGTCTATGCTTTGGATGCTTGA

Coding sequence (CDS)

ATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAATTATCGAGGAGTTTCAGAAGTGTCATATAGACCATCCTGTTGCAAAATTTTTCGGTGAATGCACAGATCTCAAAATCAAGCTCGATCGATGTTTCAGGCAGGAGAAAGCTTTGAAACGAAAGGCAAACTTTGAACAGAGTAAAAAAATGAAGGAAAGGCTAGACGCTTTAAGAAAGGAAAACGCTTTACGAAATTGCGAAGATGATGATGTTGAGCAGTACTGCAGTTTGGGTTTGGATATTCGATATTTACGACGCTGTTTAGATGTCTATGCTTTGGATGCTTGA

Protein sequence

MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENALRNCEDDDVEQYCSLGLDIRYLRRCLDVYALDA

Homology

[Close]

BLAST of ClCG10G007340 vs. Swiss-Prot
Match: COXM2_DANRE (COX assembly mitochondrial protein 2 homolog OS=Danio rerio GN=cmc2 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.8e-08
Identity = 28/77 (36.36%), Postives = 42/77 (54.55%), Query Frame = 1


Query: 1  MHPPLTLHKHP-MCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANF 60
          MHP L+ H H   C ++I   ++CH +H V KFFG C D+   +  C R+E   KR+ + 
Sbjct: 1  MHPDLSPHLHTDECNQLITLLKQCHKEHNVLKFFGTCNDMDRAMRECLRKEYQTKRERSK 60

Query: 61 EQSKKMKERLDALRKEN 77
            +++M+ RL    KE+
Sbjct: 61 AHAEEMRRRLKEQPKEH 77

[Close]

BLAST of ClCG10G007340 vs. Swiss-Prot
Match: COXM2_BOVIN (COX assembly mitochondrial protein 2 homolog OS=Bos taurus GN=CMC2 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-07
Identity = 26/70 (37.14%), Postives = 37/70 (52.86%), Query Frame = 1


Query: 1  MHPPLTLHKHPM-CAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANF 60
          MHP L+ H H   C  +I   ++CH +H + KFFG C DL  ++ +C + E   KR  + 
Sbjct: 1  MHPDLSPHLHTEECNVLINLLKECHKNHSILKFFGHCNDLDREMRKCLKNEYMEKRNKSR 60

Query: 61 EQSKKMKERL 70
          E    M++RL
Sbjct: 61 ELGNAMRKRL 70

[Close]

BLAST of ClCG10G007340 vs. Swiss-Prot
Match: COXM2_MOUSE (COX assembly mitochondrial protein 2 homolog OS=Mus musculus GN=Cmc2 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 25/70 (35.71%), Postives = 37/70 (52.86%), Query Frame = 1


Query: 1  MHPPLTLHKHPM-CAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANF 60
          MHP L+ H H   C  +I   ++CH +H + KFFG C DL  ++ +C + E + +R  + 
Sbjct: 1  MHPDLSPHLHTEECNVLINLLKECHKNHNILKFFGHCNDLDREMRKCLKNEYSERRTRSR 60

Query: 61 EQSKKMKERL 70
          E    M+ RL
Sbjct: 61 EHGAAMRRRL 70

[Close]

BLAST of ClCG10G007340 vs. Swiss-Prot
Match: COXM2_TAEGU (COX assembly mitochondrial protein 2 homolog OS=Taeniopygia guttata GN=CMC2 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 1


Query: 1  MHPPLTLHKHPM-CAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANF 60
          MHP L+ H H   C  II   +KCH +H V KFFG C D+  ++ +C ++E    R+ N 
Sbjct: 1  MHPDLSPHLHTEECNLIISLLKKCHKEHNVLKFFGHCNDIDREMRKCLKKEFEENRRRNR 60

Query: 61 EQSKKM 66
          E+ +++
Sbjct: 61 EKRQRI 66

[Close]

BLAST of ClCG10G007340 vs. Swiss-Prot
Match: COXM1_SCHPO (COX assembly mitochondrial protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cmc1 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 24/78 (30.77%), Postives = 41/78 (52.56%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHP L ++    CA++I   ++CH      KFFGEC  +K +L  C  +++  K + N E
Sbjct: 1  MHPHLDVNNQKQCADLIRALEECH--KSFGKFFGECNTIKYELKACLTKDRNDKARLNRE 60

Query: 61 QSKKMKERLDALRKENAL 79
           ++  K+ ++  RK+  +
Sbjct: 61 NARMRKKVIEENRKKEEI 76

[Close]

BLAST of ClCG10G007340 vs. TrEMBL
Match: A0A0B2PM56_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032174 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 69/77 (89.61%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCHI+HP+AKFFGECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

[Close]

BLAST of ClCG10G007340 vs. TrEMBL
Match: A0A0B0MZA9_GOSAR (Putative C16orf61 OS=Gossypium arboreum GN=F383_34011 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 69/77 (89.61%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLH+HPMCAEIIEEFQKCH++HP+AKFFGECT+LKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHRHPMCAEIIEEFQKCHLEHPIAKFFGECTELKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          QSKK+KERL ALRKE A
Sbjct: 61 QSKKLKERLQALRKETA 77

[Close]

BLAST of ClCG10G007340 vs. TrEMBL
Match: I1LM57_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G208400 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 69/77 (89.61%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCHI+HP+AKFFGECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

[Close]

BLAST of ClCG10G007340 vs. TrEMBL
Match: I1MZJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G045400 PE=4 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-34
Identity = 69/77 (89.61%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCHI+HP+AKFFGECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

[Close]

BLAST of ClCG10G007340 vs. TrEMBL
Match: A0A061E4Y0_THECC (Cytochrome c oxidase biogenesis protein Cmc1-like isoform 1 OS=Theobroma cacao GN=TCM_006383 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-34
Identity = 69/77 (89.61%), Postives = 74/77 (96.10%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLH+HPMCAEIIE+FQKCH DHP+AKFFGECT+LKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHRHPMCAEIIEQFQKCHSDHPIAKFFGECTELKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          QSKK+KERL ALRKE A
Sbjct: 61 QSKKLKERLQALRKETA 77

[Close]

BLAST of ClCG10G007340 vs. TAIR10
Match: AT4G21192.1 (AT4G21192.1 Cytochrome c oxidase biogenesis protein Cmc1-like)

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-34
Identity = 62/75 (82.67%), Postives = 68/75 (90.67%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLT H+HPMC EIIEEFQKCHIDHP+ KFFGECT+LK+KLDRCFRQEKA+KRK NFE
Sbjct: 1  MHPPLTPHRHPMCLEIIEEFQKCHIDHPIGKFFGECTELKVKLDRCFRQEKAVKRKVNFE 60

Query: 61 QSKKMKERLDALRKE 76
          QSKK++ERL A+RKE
Sbjct: 61 QSKKLQERLKAIRKE 75

[Close]

BLAST of ClCG10G007340 vs. NCBI nr
Match: gi|449431882|ref|XP_004133729.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-37
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCHIDHPV KFFGECTDLKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIDHPVGKFFGECTDLKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENAL 79
          QSKKMKERLDALRKENAL
Sbjct: 61 QSKKMKERLDALRKENAL 78

[Close]

BLAST of ClCG10G007340 vs. NCBI nr
Match: gi|659102624|ref|XP_008452227.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.1e-37
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCHIDHPV KFFGECTDLKIKLD+CFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIDHPVGKFFGECTDLKIKLDQCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENAL 79
          QSKKMKERLDALRKENAL
Sbjct: 61 QSKKMKERLDALRKENAL 78

[Close]

BLAST of ClCG10G007340 vs. NCBI nr
Match: gi|1009131090|ref|XP_015882651.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Ziziphus jujuba])

HSP 1 Score: 155.6 bits (392), Expect = 5.0e-35
Identity = 69/88 (78.41%), Postives = 79/88 (89.77%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCA++IE+FQKCH+DHP+AKFFGECTDLK+KLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAKVIEQFQKCHVDHPIAKFFGECTDLKVKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENALRNCEDDDVEQ 89
           SKK+KERL A RKEN  R+ E+ +  Q
Sbjct: 61 NSKKLKERLHAFRKENNERSSEEKNFMQ 88

[Close]

BLAST of ClCG10G007340 vs. NCBI nr
Match: gi|728827994|gb|KHG07448.1| (putative C16orf61 [Gossypium arboreum])

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 69/77 (89.61%), Postives = 75/77 (97.40%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLH+HPMCAEIIEEFQKCH++HP+AKFFGECT+LKIKLDRCFRQEKALKRKANFE
Sbjct: 1  MHPPLTLHRHPMCAEIIEEFQKCHLEHPIAKFFGECTELKIKLDRCFRQEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          QSKK+KERL ALRKE A
Sbjct: 61 QSKKLKERLQALRKETA 77

[Close]

BLAST of ClCG10G007340 vs. NCBI nr
Match: gi|356569859|ref|XP_003553112.1| (PREDICTED: COX assembly mitochondrial protein 2 homolog [Glycine max])

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 69/77 (89.61%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MHPPLTLHKHPMCAEIIEEFQKCHIDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFE 60
          MHPPLTLHKHPMCAEIIE+FQKCHI+HP+AKFFGECTDLKIKLDRCFR+EKALKRKANFE
Sbjct: 1  MHPPLTLHKHPMCAEIIEQFQKCHIEHPIAKFFGECTDLKIKLDRCFREEKALKRKANFE 60

Query: 61 QSKKMKERLDALRKENA 78
          +SKK+KE+L ALRKENA
Sbjct: 61 ESKKLKEQLRALRKENA 77

The following BLAST results are available for this feature:

BLAST of ClCG10G007340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COXM2_DANRE	6.8e-08	36.36	COX assembly mitochondrial protein 2 homolog OS=Danio rerio GN=cmc2 PE=3 SV=1	[more]
COXM2_BOVIN	5.7e-07	37.14	COX assembly mitochondrial protein 2 homolog OS=Bos taurus GN=CMC2 PE=3 SV=1	[more]
COXM2_MOUSE	1.3e-06	35.71	COX assembly mitochondrial protein 2 homolog OS=Mus musculus GN=Cmc2 PE=3 SV=1	[more]
COXM2_TAEGU	1.7e-06	37.88	COX assembly mitochondrial protein 2 homolog OS=Taeniopygia guttata GN=CMC2 PE=3...	[more]
COXM1_SCHPO	1.7e-06	30.77	COX assembly mitochondrial protein 1 OS=Schizosaccharomyces pombe (strain 972 / ...	[more]

BLAST of ClCG10G007340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B2PM56_GLYSO	1.0e-34	89.61	Uncharacterized protein OS=Glycine soja GN=glysoja_032174 PE=4 SV=1	[more]
A0A0B0MZA9_GOSAR	1.0e-34	89.61	Putative C16orf61 OS=Gossypium arboreum GN=F383_34011 PE=4 SV=1	[more]
I1LM57_SOYBN	1.0e-34	89.61	Uncharacterized protein OS=Glycine max GN=GLYMA_11G208400 PE=4 SV=1	[more]
I1MZJ5_SOYBN	1.0e-34	89.61	Uncharacterized protein OS=Glycine max GN=GLYMA_18G045400 PE=4 SV=2	[more]
A0A061E4Y0_THECC	2.2e-34	89.61	Cytochrome c oxidase biogenesis protein Cmc1-like isoform 1 OS=Theobroma cacao G...	[more]

BLAST of ClCG10G007340 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21192.1	1.2e-34	82.67	Cytochrome c oxidase biogenesis protein Cmc1-like	[more]

BLAST of ClCG10G007340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449431882\|ref\|XP_004133729.1\|	1.4e-37	97.44	PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis sativus]	[more]
gi\|659102624\|ref\|XP_008452227.1\|	4.1e-37	96.15	PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis melo]	[more]
gi\|1009131090\|ref\|XP_015882651.1\|	5.0e-35	78.41	PREDICTED: COX assembly mitochondrial protein 2 homolog [Ziziphus jujuba]	[more]
gi\|728827994\|gb\|KHG07448.1\|	1.4e-34	89.61	putative C16orf61 [Gossypium arboreum]	[more]
gi\|356569859\|ref\|XP_003553112.1\|	1.4e-34	89.61	PREDICTED: COX assembly mitochondrial protein 2 homolog [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013892	Cyt_c_biogenesis_Cmc1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G007340.1	ClCG10G007340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PFAM	PF08583	Cmc1	coord: 1..69 score: 1.8
None	No IPR available	PANTHER	PTHR22977	UPF0287 FAMILY	coord: 1..79 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G007340	Csa3G110700	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G007340	Cla011826	Watermelon (97103) v1	wcgwmB066
ClCG10G007340	Cla97C10G191030	Watermelon (97103) v2	wcgwmbB038
ClCG10G007340	Bhi11G000672	Wax gourd	wcgwgoB086
ClCG10G007340	Cucsa.114320	Cucumber (Gy14) v1	cgywcgB168
ClCG10G007340	CmaCh04G008890	Cucurbita maxima (Rimu)	cmawcgB614
ClCG10G007340	CmoCh04G009520	Cucurbita moschata (Rifu)	cmowcgB615
ClCG10G007340	Lsi05G007220	Bottle gourd (USVL1VR-Ls)	lsiwcgB319
ClCG10G007340	Cp4.1LG01g08730	Cucurbita pepo (Zucchini)	cpewcgB349
ClCG10G007340	MELO3C032219.2	Melon (DHL92) v3.6.1	medwcgB402
ClCG10G007340	Carg00003	Silver-seed gourd	carwcgB0641
ClCG10G007340	CsaV3_3G006580	Cucumber (Chinese Long) v3	cucwcgB194

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G007340	Cucurbita pepo (Zucchini)	cpewcgB195
ClCG10G007340	Bottle gourd (USVL1VR-Ls)	lsiwcgB318
ClCG10G007340	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G007340	Silver-seed gourd	carwcgB0546
ClCG10G007340	Cucurbita maxima (Rimu)	cmawcgB283
ClCG10G007340	Cucurbita moschata (Rifu)	cmowcgB278
ClCG10G007340	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G007340	Melon (DHL92) v3.5.1	mewcgB416