CmaCh04G008340 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G008340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionProtein curvature thylakoid chloroplastic-like
LocationCma_Chr04 : 4285407 .. 4287957 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACACCTGCCAAGTGATGAGCTATATATGGCTCTCATCCTCCCATGGAGCCCTCCCTTCCTCTTCCAATGTATAAGAAGCACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCCATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCTATAGCCTCGCGTCTTACTCGCGGCATCCACTTCCGTATGTTTTCAGTTCATTGCATTCTCACTCTGCTATCTAAAATGAATCTCTAGGTTTTCATTGTGGTGTTCTGTACTTTTTCTGTTGAATTTATGTGCGTTTTGTTTGTGGGTTTTATTTTGAATTGCTTTGCTTGCGTTGTTCTTTGTCGATTCTTATGGTATAACGATGAGCTGATTCTCGATTTCCTTTGGATGTACGTGGTTTTGAACTTTTTTGTTTTCTGAATTCTCTCTTAGGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCAGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCGGTGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATGCTCCTCCTGCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCTCGGAGAATCTTTCATCTGACGAAATTGTGACACCTGAAGTGCCTAAAGAAGAACCAGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTTCCGTGGGAGATTCTTCCTCTGCTGAGAATGTTGCGTACAACGAAACTTCGACAGATGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTCGATTCATTGAATGATCTGAAAGTAAGAACTTTTATTGAAGCCATGCGATTTATTCTTTTGCAAGTTAATCGTGTTAACCCGTAAGTAAATGTCTTTTGCCGTCTCTTTCTTATCTCAACAAATGAGTGCAAAGCTATTGAGATACCCTTTTCAAATTTTTTGGATCACTTGGCTTTTGATTTTTCAAATTTTTTGGATTGCTTGCCTTTTGATTTATCTATCTATTTCTGCTTTCAATATCTTCCCATGGTCTGGACTATGGCTTGATTCCACTGTAAAATACCTTCTTCCTTGGGTAACTTGGACGATTTTTGTCTGTGTTAACTACTGAGAATTTGGAGTCCTCTTTTTTTTTTTTAATATTTTAATTTCGAGTGCTGTTGCCTTCTTTTTTCAAAAATTGGGTTTTGGTTTTTCCCTGCATGCGTATTTCTTTCATTTCTCGTATGACCTTTCGAAGTTAGTTGCAGTGATGATATCATCAAACTTGATAGTATATACAAATGCTACATGAAAGGTCGACAATTATGTCGACCTGAGCGGTTAATCGAGCAACCTGACTTCTCTAATTGTTTTTTTCTTGTTGTATTTCTTGCTTGTATTCAATTTTCTTTTAAAATTGTTCTTCTCTAACTTCTCTTATTATTTTGTTGTCCATCAAAGTTTCTGTGTCTTCAATCATAATGGGAAATTTGCTATTTCGAGATGGAAATCAGTATTTCTTATTGAAGTTTGAACTTTTATAGCTCTTGTCAATTAGGAAACACCATTTTGGAATAACTGATATTATAATGTATATGTTTTCATTTTTCGGTTTGAGATTGCTTCATCCTATGAAAGGTTTGATGGTTACTTTTGCTCACAGCTCGAGTCGGTCGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTTTTTTGGCCTCTGGTTGGTTTCAACCGTTGTTGGTGCTTTTGATTCCATCCCATTGGTGAGTAGTTCTCACTTTTATCTCTCTAAGATTTTGTATTGGATTAGAACTGAATGAGTAAATTGTAGGGTGTCATCAATTGGTAAAGTTTCTTAAGGCAAATTTAGAACCGTGCGTTCTTGTAAATCTATAGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACAGTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGTAATTGCCTTTTGAACTGAAATCCTGTTTTTCCTTCCTCCGAGTATGTGATAAATGAGCTAATAATTTTTTTTTGTTGTAACCTCACAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTTAGGTAGATAGTTATGTTTGCATAGATAGATAGCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATACGGGTATTATAAATAAGAACATAGGAACGTGAATTAGGAAAAAAA

mRNA sequence

CTTACACCTGCCAAGTGATGAGCTATATATGGCTCTCATCCTCCCATGGAGCCCTCCCTTCCTCTTCCAATGTATAAGAAGCACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCCATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCTATAGCCTCGCGTCTTACTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCAGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCGGTGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATGCTCCTCCTGCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCTCGGAGAATCTTTCATCTGACGAAATTGTGACACCTGAAGTGCCTAAAGAAGAACCAGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTTCCGTGGGAGATTCTTCCTCTGCTGAGAATGTTGCGTACAACGAAACTTCGACAGATGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTCGATTCATTGAATGATCTGAAACTCGAGTCGGTCGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTTTTTTGGCCTCTGGTTGGTTTCAACCGTTGTTGGTGCTTTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACAGTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTTAGGTAGATAGTTATGTTTGCATAGATAGATAGCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATACGGGTATTATAAATAAGAACATAGGAACGTGAATTAGGAAAAAAA

Coding sequence (CDS)

ATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCTATAGCCTCGCGTCTTACTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCAGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCGGTGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATGCTCCTCCTGCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCTCGGAGAATCTTTCATCTGACGAAATTGTGACACCTGAAGTGCCTAAAGAAGAACCAGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTTCCGTGGGAGATTCTTCCTCTGCTGAGAATGTTGCGTACAACGAAACTTCGACAGATGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTCGATTCATTGAATGATCTGAAACTCGAGTCGGTCGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTTTTTTGGCCTCTGGTTGGTTTCAACCGTTGTTGGTGCTTTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACAGTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGA

Protein sequence

MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPRAAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSPPASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG
Homology
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BLAST of CmaCh04G008340 vs. Swiss-Prot
Match: CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.5e-22
Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 157 VAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLE 216
           V  E S   +   V D       A  + S  E P+ E +E          L+ LND+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 217 SVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESR 276
           S   YS+ LYG GA   L+L S +V + ++IPL PKL+E+VGLGYT+WF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 277 DELAAKIDEIKEQVIG 293
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]
BLAST of CmaCh04G008340 vs. Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.4e-14
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 1 

Query: 136 SSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASV------GDSSSAENVAYNETSTDEE 195
           SS  ++ P VP       A       S   SS +V      G+      +     S++E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 196 PKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPL 255
              +  E   ++ ++W  D L +       K ++ +YGGGA   +WL S VVGA +S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGLEN-------KSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 256 VPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: A0A0A0KZ51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097640 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.2e-64
Identity = 153/292 (52.40%), Postives = 186/292 (63.70%), Query Frame = 1 

Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL  N  LRP+ ALPL++ I+S  T  +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPLF-----STLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPR 60

Query: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120
           AAASD+S GSS + TE+RDS  V EDS  ASS+ +EDS                      
Sbjct: 61  AAASDESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDS---------------------- 120

Query: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180
                     P E + SD +   EVPK+EPVED PV+ ++DS SA    +  S       
Sbjct: 121 ----------PPEEIPSDVLAATEVPKQEPVEDVPVITLDDSSSAGKVEMVTS------- 180

Query: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240
                      EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +
Sbjct: 181 -----------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAI 237

Query: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV+G
Sbjct: 241 VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 237

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BLAST of CmaCh04G008340 vs. TrEMBL
Match: M5W986_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011455mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 1 

Query: 166 SSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLN--DLKLESVDKYSL 225
           S  S+ D    EN  YN T T+E PKE+     V+  Q    +  N  D+KL+S D YS+
Sbjct: 78  SVISLEDVPPPENNFYNRTWTEEAPKEDSTVDGVD-GQTQISEFFNNLDIKLDSDDTYSV 137

Query: 226 ALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKI 285
            +YGGGA F LWL S VVGA DSIPL PKLLE+VGLGYT+WF+ R+L+FKE+R+EL AKI
Sbjct: 138 LIYGGGALFALWLASAVVGAIDSIPLFPKLLEVVGLGYTIWFSTRYLIFKENREELFAKI 197

Query: 286 DEIKEQVIG 293
             +K+QV+G
Sbjct: 198 QVLKQQVLG 205

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: D7SSS3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00150 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-25
Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 1 

Query: 172 DSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAF 231
           D  + E   YNE    E P E+ + +   VA E+ LD+LN +K +S D YS+ LYG GA 
Sbjct: 82  DIPATEENVYNEVIPTEAPIEDSQVEEQTVAFEF-LDNLN-IKFDSEDPYSIFLYGTGAL 141

Query: 232 FGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVI 291
             LW  S +VGA DSIP+ PKL+EIVGLGYT+WF+AR+L+FK++RDELAAKI+E+K+QV+
Sbjct: 142 TALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQNRDELAAKIEELKQQVL 200

Query: 292 G 293
           G
Sbjct: 202 G 200

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: D7SSS0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00110 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-25
Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 1 

Query: 172 DSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAF 231
           D  + E   YNE    E P E+ + +   VA E+ LD+LN +K +S D YS+ LYG GA 
Sbjct: 82  DIPATEENVYNEVIPTEAPIEDSQVEEQTVAFEF-LDNLN-IKFDSEDPYSIFLYGTGAL 141

Query: 232 FGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVI 291
             LW  S +VGA DSIP+ PKL+EIVGLGYT+WF+AR+L+FK++RDELAAKI+E+K+QV+
Sbjct: 142 TALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQNRDELAAKIEELKQQVL 200

Query: 292 G 293
           G
Sbjct: 202 G 200

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: V4SKY6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026488mg PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 73/150 (48.67%), Postives = 95/150 (63.33%), Query Frame = 1 

Query: 143 PEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVA 202
           P+   EE         V+    A++A   D  + E   YNE+     PKEE    PV+  
Sbjct: 62  PKATSEETSSGTDQYVVDKRDGATAAE--DVPAVEKNVYNESVATAVPKEE---SPVDGL 121

Query: 203 QEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYT 262
               LD+L  +K +S DKYSL LYG GA   LWL + VVGA DSIPL PKL+E+VGLGYT
Sbjct: 122 TNELLDNLK-IKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYT 181

Query: 263 VWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           +WF+ R+LLFK++RDELA KI+E+K+QV+G
Sbjct: 182 LWFSWRYLLFKKNRDELATKIEELKQQVLG 205

[Close]
BLAST of CmaCh04G008340 vs. TAIR10
Match: AT4G38100.1 (AT4G38100.1 unknown protein)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-23
Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 157 VAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLE 216
           V  E S   +   V D       A  + S  E P+ E +E          L+ LND+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 217 SVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESR 276
           S   YS+ LYG GA   L+L S +V + ++IPL PKL+E+VGLGYT+WF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 277 DELAAKIDEIKEQVIG 293
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]
BLAST of CmaCh04G008340 vs. TAIR10
Match: AT4G01150.1 (AT4G01150.1 unknown protein)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-15
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 1 

Query: 136 SSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASV------GDSSSAENVAYNETSTDEE 195
           SS  ++ P VP       A       S   SS +V      G+      +     S++E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 196 PKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPL 255
              +  E   ++ ++W  D L +       K ++ +YGGGA   +WL S VVGA +S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGLEN-------KSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 256 VPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]
BLAST of CmaCh04G008340 vs. TAIR10
Match: AT1G52220.1 (AT1G52220.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 23/77 (29.87%), Postives = 40/77 (51.95%), Query Frame = 1 

Query: 216 ESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKES 275
           +S D+  L   G      LW    ++ A D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 276 RDELAAKIDEIKEQVIG 293
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|778691825|ref|XP_011653358.1| (PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 6.1e-64
Identity = 153/292 (52.40%), Postives = 186/292 (63.70%), Query Frame = 1 

Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL  N  LRP+ ALPL++ I+S  T  +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPLF-----STLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPR 60

Query: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120
           AAASD+S GSS + TE+RDS  V EDS  ASS+ +EDS                      
Sbjct: 61  AAASDESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDS---------------------- 120

Query: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180
                     P E + SD +   EVPK+EPVED PV+ ++DS SA    +  S       
Sbjct: 121 ----------PPEEIPSDVLAATEVPKQEPVEDVPVITLDDSSSAGKVEMVTS------- 180

Query: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240
                      EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +
Sbjct: 181 -----------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAI 237

Query: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV+G
Sbjct: 241 VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 237

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|659111160|ref|XP_008455610.1| (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 7.7e-59
Identity = 148/292 (50.68%), Postives = 179/292 (61.30%), Query Frame = 1 

Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL     LRP+ ALPL++ I+S  T  +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPLF-----STLLTGKPHLRPRPALPLRIAISSACTTSLHSRHRHFAVSLPR 60

Query: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120
           AAASD+S   SP+ TE+RDS  V EDS  ASS+ +EDS P                    
Sbjct: 61  AAASDES---SPFFTEQRDSVTVLEDSPSASSLTLEDSPP-------------------- 120

Query: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180
                       E + SD I   EVPK+EPVED PVV + +  ++               
Sbjct: 121 ------------EEIPSDGIAATEVPKQEPVEDVPVVTLVEIATS--------------- 180

Query: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240
                      EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +
Sbjct: 181 -----------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAI 226

Query: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV G
Sbjct: 241 VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFG 226

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|659111163|ref|XP_008455611.1| (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51
Identity = 130/246 (52.85%), Postives = 153/246 (62.20%), Query Frame = 1 

Query: 48  HFR-YRHFSVSLPRAAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAV 107
           HF  +RHF+VSLPRAAASD+S   SP+ TE+RDS  V EDS  ASS+ +EDS P      
Sbjct: 11  HFMGHRHFAVSLPRAAASDES---SPFFTEQRDSVTVLEDSPSASSLTLEDSPP------ 70

Query: 108 EDAPPASVAVEDSPPASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSAS 167
                                     E + SD I   EVPK+EPVED PVV + +  ++ 
Sbjct: 71  --------------------------EEIPSDGIAATEVPKQEPVEDVPVVTLVEIATS- 130

Query: 168 SASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALY 227
                                    EEPKE+P+E AQE   + LNDLKLESVD YSLALY
Sbjct: 131 -------------------------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALY 190

Query: 228 GGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEI 287
           G GAFFG+WLVS +VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+
Sbjct: 191 GAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDEL 195

Query: 288 KEQVIG 293
           KEQV G
Sbjct: 251 KEQVFG 195

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|694437211|ref|XP_009345652.1| (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 75/146 (51.37%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 147 KEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWT 206
           +E P    P  A E S       + D    E   YN+T T+EE KE+         Q + 
Sbjct: 67  EETPSGPNPYAAEERS---GGVFLEDVVPPEKNLYNQTWTEEEVKEDANADADGQIQIFD 126

Query: 207 LDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFA 266
             S  DLKL+S D YSL LYGGGA F LWL S VVGA DSIPL PKLLE+VGLGYTVWF+
Sbjct: 127 YFSNLDLKLDSEDTYSLLLYGGGALFALWLASAVVGAIDSIPLFPKLLEVVGLGYTVWFS 186

Query: 267 ARFLLFKESRDELAAKIDEIKEQVIG 293
           +R+L+FK++RDEL AK+  +K+QV+G
Sbjct: 187 SRYLIFKKNRDELVAKVQVLKQQVLG 209

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|595843805|ref|XP_007208687.1| (hypothetical protein PRUPE_ppa011455mg [Prunus persica])

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 1 

Query: 166 SSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLN--DLKLESVDKYSL 225
           S  S+ D    EN  YN T T+E PKE+     V+  Q    +  N  D+KL+S D YS+
Sbjct: 78  SVISLEDVPPPENNFYNRTWTEEAPKEDSTVDGVD-GQTQISEFFNNLDIKLDSDDTYSV 137

Query: 226 ALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKI 285
            +YGGGA F LWL S VVGA DSIPL PKLLE+VGLGYT+WF+ R+L+FKE+R+EL AKI
Sbjct: 138 LIYGGGALFALWLASAVVGAIDSIPLFPKLLEVVGLGYTIWFSTRYLIFKENREELFAKI 197

Query: 286 DEIKEQVIG 293
             +K+QV+G
Sbjct: 198 QVLKQQVLG 205

The following BLAST results are available for this feature:
BLAST of CmaCh04G008340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CUT1D_ARATH7.5e-2243.38Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D ... [more]
CUT1A_ARATH4.4e-1434.97Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A ... [more]
BLAST of CmaCh04G008340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ51_CUCSA4.2e-6452.40Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097640 PE=4 SV=1[more]
M5W986_PRUPE1.0e-2554.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011455mg PE=4 SV=1[more]
D7SSS3_VITVI5.1e-2554.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00150 PE=4 SV=... [more]
D7SSS0_VITVI5.1e-2554.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00110 PE=4 SV=... [more]
V4SKY6_9ROSI1.9e-2448.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026488mg PE=4 SV=1[more]
BLAST of CmaCh04G008340 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38100.14.2e-2343.38 unknown protein[more]
AT4G01150.12.5e-1534.97 unknown protein[more]
AT1G52220.11.6e-0629.87 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CmaCh04G008340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778691825|ref|XP_011653358.1|6.1e-6452.40PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus][more]
gi|659111160|ref|XP_008455610.1|7.7e-5950.68PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis mel... [more]
gi|659111163|ref|XP_008455611.1|5.9e-5152.85PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 [Cucumis mel... [more]
gi|694437211|ref|XP_009345652.1|1.1e-2551.37PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Pyrus x bre... [more]
gi|595843805|ref|XP_007208687.1|1.5e-2554.26hypothetical protein PRUPE_ppa011455mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025564CAAD_dom
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G008340.1CmaCh04G008340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 219..292
score: 2.6
NoneNo IPR availablePANTHERPTHR33222:SF2PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTICcoord: 177..292
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G008340Cla004848Watermelon (97103) v1cmawmB654
CmaCh04G008340Csa4G097640Cucumber (Chinese Long) v2cmacuB711
CmaCh04G008340MELO3C018978Melon (DHL92) v3.5.1cmameB698
CmaCh04G008340ClCG10G008710Watermelon (Charleston Gray)cmawcgB614
CmaCh04G008340CSPI04G08750Wild cucumber (PI 183967)cmacpiB717
CmaCh04G008340CmoCh16G007810Cucurbita moschata (Rifu)cmacmoB700
CmaCh04G008340CmoCh04G008920Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G008340Lsi03G009150Bottle gourd (USVL1VR-Ls)cmalsiB664
CmaCh04G008340Cp4.1LG14g00940Cucurbita pepo (Zucchini)cmacpeB714
CmaCh04G008340Cp4.1LG01g09120Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G008340MELO3C018978.2Melon (DHL92) v3.6.1cmamedB788
CmaCh04G008340CsaV3_4G008970Cucumber (Chinese Long) v3cmacucB0845
CmaCh04G008340Cla97C10G192050Watermelon (97103) v2cmawmbB718
CmaCh04G008340Bhi11G000813Wax gourdcmawgoB0822
CmaCh04G008340CsGy4G008580Cucumber (Gy14) v2cgybcmaB544
CmaCh04G008340Carg05839Silver-seed gourdcarcmaB1414
CmaCh04G008340Carg14234Silver-seed gourdcarcmaB1288
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G008340CmaCh16G007230Cucurbita maxima (Rimu)cmacmaB350
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G008340Melon (DHL92) v3.6.1cmamedB804
CmaCh04G008340Cucumber (Chinese Long) v3cmacucB0917
CmaCh04G008340Watermelon (97103) v2cmawmbB712
CmaCh04G008340Wax gourdcmawgoB0883
CmaCh04G008340Cucurbita maxima (Rimu)cmacmaB546
CmaCh04G008340Cucurbita moschata (Rifu)cmacmoB727
CmaCh04G008340Wild cucumber (PI 183967)cmacpiB785
CmaCh04G008340Melon (DHL92) v3.5.1cmameB710
CmaCh04G008340Watermelon (Charleston Gray)cmawcgB639
CmaCh04G008340Watermelon (97103) v1cmawmB715
CmaCh04G008340Cucurbita pepo (Zucchini)cmacpeB702
CmaCh04G008340Cucurbita pepo (Zucchini)cmacpeB741
CmaCh04G008340Bottle gourd (USVL1VR-Ls)cmalsiB639