CmaCh04G008340 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G008340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionProtein curvature thylakoid chloroplastic-like
LocationCma_Chr04 : 4285407 .. 4287957 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACACCTGCCAAGTGATGAGCTATATATGGCTCTCATCCTCCCATGGAGCCCTCCCTTCCTCTTCCAATGTATAAGAAGCACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCCATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCTATAGCCTCGCGTCTTACTCGCGGCATCCACTTCCGTATGTTTTCAGTTCATTGCATTCTCACTCTGCTATCTAAAATGAATCTCTAGGTTTTCATTGTGGTGTTCTGTACTTTTTCTGTTGAATTTATGTGCGTTTTGTTTGTGGGTTTTATTTTGAATTGCTTTGCTTGCGTTGTTCTTTGTCGATTCTTATGGTATAACGATGAGCTGATTCTCGATTTCCTTTGGATGTACGTGGTTTTGAACTTTTTTGTTTTCTGAATTCTCTCTTAGGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCAGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCGGTGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATGCTCCTCCTGCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCTCGGAGAATCTTTCATCTGACGAAATTGTGACACCTGAAGTGCCTAAAGAAGAACCAGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTTCCGTGGGAGATTCTTCCTCTGCTGAGAATGTTGCGTACAACGAAACTTCGACAGATGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTCGATTCATTGAATGATCTGAAAGTAAGAACTTTTATTGAAGCCATGCGATTTATTCTTTTGCAAGTTAATCGTGTTAACCCGTAAGTAAATGTCTTTTGCCGTCTCTTTCTTATCTCAACAAATGAGTGCAAAGCTATTGAGATACCCTTTTCAAATTTTTTGGATCACTTGGCTTTTGATTTTTCAAATTTTTTGGATTGCTTGCCTTTTGATTTATCTATCTATTTCTGCTTTCAATATCTTCCCATGGTCTGGACTATGGCTTGATTCCACTGTAAAATACCTTCTTCCTTGGGTAACTTGGACGATTTTTGTCTGTGTTAACTACTGAGAATTTGGAGTCCTCTTTTTTTTTTTTAATATTTTAATTTCGAGTGCTGTTGCCTTCTTTTTTCAAAAATTGGGTTTTGGTTTTTCCCTGCATGCGTATTTCTTTCATTTCTCGTATGACCTTTCGAAGTTAGTTGCAGTGATGATATCATCAAACTTGATAGTATATACAAATGCTACATGAAAGGTCGACAATTATGTCGACCTGAGCGGTTAATCGAGCAACCTGACTTCTCTAATTGTTTTTTTCTTGTTGTATTTCTTGCTTGTATTCAATTTTCTTTTAAAATTGTTCTTCTCTAACTTCTCTTATTATTTTGTTGTCCATCAAAGTTTCTGTGTCTTCAATCATAATGGGAAATTTGCTATTTCGAGATGGAAATCAGTATTTCTTATTGAAGTTTGAACTTTTATAGCTCTTGTCAATTAGGAAACACCATTTTGGAATAACTGATATTATAATGTATATGTTTTCATTTTTCGGTTTGAGATTGCTTCATCCTATGAAAGGTTTGATGGTTACTTTTGCTCACAGCTCGAGTCGGTCGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTTTTTTGGCCTCTGGTTGGTTTCAACCGTTGTTGGTGCTTTTGATTCCATCCCATTGGTGAGTAGTTCTCACTTTTATCTCTCTAAGATTTTGTATTGGATTAGAACTGAATGAGTAAATTGTAGGGTGTCATCAATTGGTAAAGTTTCTTAAGGCAAATTTAGAACCGTGCGTTCTTGTAAATCTATAGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACAGTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGTAATTGCCTTTTGAACTGAAATCCTGTTTTTCCTTCCTCCGAGTATGTGATAAATGAGCTAATAATTTTTTTTTGTTGTAACCTCACAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTTAGGTAGATAGTTATGTTTGCATAGATAGATAGCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATACGGGTATTATAAATAAGAACATAGGAACGTGAATTAGGAAAAAAA

mRNA sequence

CTTACACCTGCCAAGTGATGAGCTATATATGGCTCTCATCCTCCCATGGAGCCCTCCCTTCCTCTTCCAATGTATAAGAAGCACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCCATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCTATAGCCTCGCGTCTTACTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCAGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCGGTGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATGCTCCTCCTGCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCTCGGAGAATCTTTCATCTGACGAAATTGTGACACCTGAAGTGCCTAAAGAAGAACCAGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTTCCGTGGGAGATTCTTCCTCTGCTGAGAATGTTGCGTACAACGAAACTTCGACAGATGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTCGATTCATTGAATGATCTGAAACTCGAGTCGGTCGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTTTTTTGGCCTCTGGTTGGTTTCAACCGTTGTTGGTGCTTTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACAGTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTTAGGTAGATAGTTATGTTTGCATAGATAGATAGCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATACGGGTATTATAAATAAGAACATAGGAACGTGAATTAGGAAAAAAA

Coding sequence (CDS)

ATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCTGCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCTATAGCCTCGCGTCTTACTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCCTCTGATGATTCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCAGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCGGTGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATGCTCCTCCTGCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCTCGGAGAATCTTTCATCTGACGAAATTGTGACACCTGAAGTGCCTAAAGAAGAACCAGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTTCCGTGGGAGATTCTTCCTCTGCTGAGAATGTTGCGTACAACGAAACTTCGACAGATGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTCGATTCATTGAATGATCTGAAACTCGAGTCGGTCGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTTTTTTGGCCTCTGGTTGGTTTCAACCGTTGTTGGTGCTTTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACAGTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGA

Protein sequence

MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPRAAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSPPASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG
Homology
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BLAST of CmaCh04G008340 vs. Swiss-Prot
Match: CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.5e-22
Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 157 VAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLE 216
           V  E S   +   V D       A  + S  E P+ E +E          L+ LND+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 217 SVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESR 276
           S   YS+ LYG GA   L+L S +V + ++IPL PKL+E+VGLGYT+WF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 277 DELAAKIDEIKEQVIG 293
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]
BLAST of CmaCh04G008340 vs. Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.4e-14
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 1 

Query: 136 SSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASV------GDSSSAENVAYNETSTDEE 195
           SS  ++ P VP       A       S   SS +V      G+      +     S++E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 196 PKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPL 255
              +  E   ++ ++W  D L +       K ++ +YGGGA   +WL S VVGA +S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGLEN-------KSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 256 VPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: A0A0A0KZ51_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097640 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.2e-64
Identity = 153/292 (52.40%), Postives = 186/292 (63.70%), Query Frame = 1 

Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL  N  LRP+ ALPL++ I+S  T  +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPLF-----STLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPR 60

Query: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120
           AAASD+S GSS + TE+RDS  V EDS  ASS+ +EDS                      
Sbjct: 61  AAASDESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDS---------------------- 120

Query: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180
                     P E + SD +   EVPK+EPVED PV+ ++DS SA    +  S       
Sbjct: 121 ----------PPEEIPSDVLAATEVPKQEPVEDVPVITLDDSSSAGKVEMVTS------- 180

Query: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240
                      EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +
Sbjct: 181 -----------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAI 237

Query: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV+G
Sbjct: 241 VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 237

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BLAST of CmaCh04G008340 vs. TrEMBL
Match: M5W986_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011455mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 1 

Query: 166 SSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLN--DLKLESVDKYSL 225
           S  S+ D    EN  YN T T+E PKE+     V+  Q    +  N  D+KL+S D YS+
Sbjct: 78  SVISLEDVPPPENNFYNRTWTEEAPKEDSTVDGVD-GQTQISEFFNNLDIKLDSDDTYSV 137

Query: 226 ALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKI 285
            +YGGGA F LWL S VVGA DSIPL PKLLE+VGLGYT+WF+ R+L+FKE+R+EL AKI
Sbjct: 138 LIYGGGALFALWLASAVVGAIDSIPLFPKLLEVVGLGYTIWFSTRYLIFKENREELFAKI 197

Query: 286 DEIKEQVIG 293
             +K+QV+G
Sbjct: 198 QVLKQQVLG 205

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: D7SSS3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00150 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-25
Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 1 

Query: 172 DSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAF 231
           D  + E   YNE    E P E+ + +   VA E+ LD+LN +K +S D YS+ LYG GA 
Sbjct: 82  DIPATEENVYNEVIPTEAPIEDSQVEEQTVAFEF-LDNLN-IKFDSEDPYSIFLYGTGAL 141

Query: 232 FGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVI 291
             LW  S +VGA DSIP+ PKL+EIVGLGYT+WF+AR+L+FK++RDELAAKI+E+K+QV+
Sbjct: 142 TALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQNRDELAAKIEELKQQVL 200

Query: 292 G 293
           G
Sbjct: 202 G 200

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: D7SSS0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00110 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-25
Identity = 66/121 (54.55%), Postives = 88/121 (72.73%), Query Frame = 1 

Query: 172 DSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAF 231
           D  + E   YNE    E P E+ + +   VA E+ LD+LN +K +S D YS+ LYG GA 
Sbjct: 82  DIPATEENVYNEVIPTEAPIEDSQVEEQTVAFEF-LDNLN-IKFDSEDPYSIFLYGTGAL 141

Query: 232 FGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVI 291
             LW  S +VGA DSIP+ PKL+EIVGLGYT+WF+AR+L+FK++RDELAAKI+E+K+QV+
Sbjct: 142 TALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQNRDELAAKIEELKQQVL 200

Query: 292 G 293
           G
Sbjct: 202 G 200

[Close]
BLAST of CmaCh04G008340 vs. TrEMBL
Match: V4SKY6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026488mg PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 73/150 (48.67%), Postives = 95/150 (63.33%), Query Frame = 1 

Query: 143 PEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVA 202
           P+   EE         V+    A++A   D  + E   YNE+     PKEE    PV+  
Sbjct: 62  PKATSEETSSGTDQYVVDKRDGATAAE--DVPAVEKNVYNESVATAVPKEE---SPVDGL 121

Query: 203 QEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYT 262
               LD+L  +K +S DKYSL LYG GA   LWL + VVGA DSIPL PKL+E+VGLGYT
Sbjct: 122 TNELLDNLK-IKFDSEDKYSLVLYGTGALLALWLTTVVVGAIDSIPLFPKLMEVVGLGYT 181

Query: 263 VWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           +WF+ R+LLFK++RDELA KI+E+K+QV+G
Sbjct: 182 LWFSWRYLLFKKNRDELATKIEELKQQVLG 205

[Close]
BLAST of CmaCh04G008340 vs. TAIR10
Match: AT4G38100.1 (AT4G38100.1 unknown protein)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-23
Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 1 

Query: 157 VAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLE 216
           V  E S   +   V D       A  + S  E P+ E +E          L+ LND+KL+
Sbjct: 61  VTEETSTGVNEFGVEDRDGVVVAAEEKNSNSEAPQAEDEETQ-------ALEFLNDIKLD 120

Query: 217 SVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESR 276
           S   YS+ LYG GA   L+L S +V + ++IPL PKL+E+VGLGYT+WF  R+LLFK +R
Sbjct: 121 SDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNR 180

Query: 277 DELAAKIDEIKEQVIG 293
           +EL  K+ EIK+QV+G
Sbjct: 181 EELKTKVSEIKKQVLG 189

[Close]
BLAST of CmaCh04G008340 vs. TAIR10
Match: AT4G01150.1 (AT4G01150.1 unknown protein)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-15
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 1 

Query: 136 SSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASV------GDSSSAENVAYNETSTDEE 195
           SS  ++ P VP       A       S   SS +V      G+      +     S++E 
Sbjct: 9   SSMAVMVPRVPAVSTRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASSEET 68

Query: 196 PKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPL 255
              +  E   ++ ++W  D L +       K ++ +YGGGA   +WL S VVGA +S+PL
Sbjct: 69  SSIDTNELITDLKEKW--DGLEN-------KSTVLIYGGGAIVAVWLSSIVVGAINSVPL 128

Query: 256 VPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           +PK++E+VGLGYT WF  R+LLFK SR ELA  I+ +K+++ G
Sbjct: 129 LPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAG 162

[Close]
BLAST of CmaCh04G008340 vs. TAIR10
Match: AT1G52220.1 (AT1G52220.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 23/77 (29.87%), Postives = 40/77 (51.95%), Query Frame = 1 

Query: 216 ESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKES 275
           +S D+  L   G      LW    ++ A D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 276 RDELAAKIDEIKEQVIG 293
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|778691825|ref|XP_011653358.1| (PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 6.1e-64
Identity = 153/292 (52.40%), Postives = 186/292 (63.70%), Query Frame = 1 

Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL  N  LRP+ ALPL++ I+S  T  +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPLF-----STLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPR 60

Query: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120
           AAASD+S GSS + TE+RDS  V EDS  ASS+ +EDS                      
Sbjct: 61  AAASDESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDS---------------------- 120

Query: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180
                     P E + SD +   EVPK+EPVED PV+ ++DS SA    +  S       
Sbjct: 121 ----------PPEEIPSDVLAATEVPKQEPVEDVPVITLDDSSSAGKVEMVTS------- 180

Query: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240
                      EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +
Sbjct: 181 -----------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAI 237

Query: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV+G
Sbjct: 241 VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 237

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|659111160|ref|XP_008455610.1| (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 7.7e-59
Identity = 148/292 (50.68%), Postives = 179/292 (61.30%), Query Frame = 1 

Query: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL     LRP+ ALPL++ I+S  T  +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPLF-----STLLTGKPHLRPRPALPLRIAISSACTTSLHSRHRHFAVSLPR 60

Query: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAVEDAPPASVAVEDSP 120
           AAASD+S   SP+ TE+RDS  V EDS  ASS+ +EDS P                    
Sbjct: 61  AAASDES---SPFFTEQRDSVTVLEDSPSASSLTLEDSPP-------------------- 120

Query: 121 PASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVA 180
                       E + SD I   EVPK+EPVED PVV + +  ++               
Sbjct: 121 ------------EEIPSDGIAATEVPKQEPVEDVPVVTLVEIATS--------------- 180

Query: 181 YNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTV 240
                      EEPKE+P+E AQE   + LNDLKLESVD YSLALYG GAFFG+WLVS +
Sbjct: 181 -----------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAI 226

Query: 241 VGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 293
           VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+KEQV G
Sbjct: 241 VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFG 226

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|659111163|ref|XP_008455611.1| (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 5.9e-51
Identity = 130/246 (52.85%), Postives = 153/246 (62.20%), Query Frame = 1 

Query: 48  HFR-YRHFSVSLPRAAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSSPASSVAV 107
           HF  +RHF+VSLPRAAASD+S   SP+ TE+RDS  V EDS  ASS+ +EDS P      
Sbjct: 11  HFMGHRHFAVSLPRAAASDES---SPFFTEQRDSVTVLEDSPSASSLTLEDSPP------ 70

Query: 108 EDAPPASVAVEDSPPASSVAEENLPSENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSAS 167
                                     E + SD I   EVPK+EPVED PVV + +  ++ 
Sbjct: 71  --------------------------EEIPSDGIAATEVPKQEPVEDVPVVTLVEIATS- 130

Query: 168 SASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLNDLKLESVDKYSLALY 227
                                    EEPKE+P+E AQE   + LNDLKLESVD YSLALY
Sbjct: 131 -------------------------EEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALY 190

Query: 228 GGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEI 287
           G GAFFG+WLVS +VGA DSIPLVPKLLE+VGLGY+VWF AR+LLFKESRDELAA+IDE+
Sbjct: 191 GAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDEL 195

Query: 288 KEQVIG 293
           KEQV G
Sbjct: 251 KEQVFG 195

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|694437211|ref|XP_009345652.1| (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 75/146 (51.37%), Postives = 93/146 (63.70%), Query Frame = 1 

Query: 147 KEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWT 206
           +E P    P  A E S       + D    E   YN+T T+EE KE+         Q + 
Sbjct: 67  EETPSGPNPYAAEERS---GGVFLEDVVPPEKNLYNQTWTEEEVKEDANADADGQIQIFD 126

Query: 207 LDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFA 266
             S  DLKL+S D YSL LYGGGA F LWL S VVGA DSIPL PKLLE+VGLGYTVWF+
Sbjct: 127 YFSNLDLKLDSEDTYSLLLYGGGALFALWLASAVVGAIDSIPLFPKLLEVVGLGYTVWFS 186

Query: 267 ARFLLFKESRDELAAKIDEIKEQVIG 293
           +R+L+FK++RDEL AK+  +K+QV+G
Sbjct: 187 SRYLIFKKNRDELVAKVQVLKQQVLG 209

[Close]
BLAST of CmaCh04G008340 vs. NCBI nr
Match: gi|595843805|ref|XP_007208687.1| (hypothetical protein PRUPE_ppa011455mg [Prunus persica])

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 1 

Query: 166 SSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEVAQEWTLDSLN--DLKLESVDKYSL 225
           S  S+ D    EN  YN T T+E PKE+     V+  Q    +  N  D+KL+S D YS+
Sbjct: 78  SVISLEDVPPPENNFYNRTWTEEAPKEDSTVDGVD-GQTQISEFFNNLDIKLDSDDTYSV 137

Query: 226 ALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGYTVWFAARFLLFKESRDELAAKI 285
            +YGGGA F LWL S VVGA DSIPL PKLLE+VGLGYT+WF+ R+L+FKE+R+EL AKI
Sbjct: 138 LIYGGGALFALWLASAVVGAIDSIPLFPKLLEVVGLGYTIWFSTRYLIFKENREELFAKI 197

Query: 286 DEIKEQVIG 293
             +K+QV+G
Sbjct: 198 QVLKQQVLG 205

The following BLAST results are available for this feature:
BLAST of CmaCh04G008340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CUT1D_ARATH7.5e-2243.38Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D ... [more]
CUT1A_ARATH4.4e-1434.97Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A ... [more]
BLAST of CmaCh04G008340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ51_CUCSA4.2e-6452.40Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097640 PE=4 SV=1[more]
M5W986_PRUPE1.0e-2554.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011455mg PE=4 SV=1[more]
D7SSS3_VITVI5.1e-2554.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00150 PE=4 SV=... [more]
D7SSS0_VITVI5.1e-2554.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00110 PE=4 SV=... [more]
V4SKY6_9ROSI1.9e-2448.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026488mg PE=4 SV=1[more]
BLAST of CmaCh04G008340 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38100.14.2e-2343.38 unknown protein[more]
AT4G01150.12.5e-1534.97 unknown protein[more]
AT1G52220.11.6e-0629.87 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CmaCh04G008340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778691825|ref|XP_011653358.1|6.1e-6452.40PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus][more]
gi|659111160|ref|XP_008455610.1|7.7e-5950.68PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis mel... [more]
gi|659111163|ref|XP_008455611.1|5.9e-5152.85PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 [Cucumis mel... [more]
gi|694437211|ref|XP_009345652.1|1.1e-2551.37PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Pyrus x bre... [more]
gi|595843805|ref|XP_007208687.1|1.5e-2554.26hypothetical protein PRUPE_ppa011455mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025564CAAD_dom
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G008340.1CmaCh04G008340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 219..292
score: 2.6
NoneNo IPR availablePANTHERPTHR33222:SF2PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTICcoord: 177..292
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G008340Cla004848Watermelon (97103) v1cmawmB654
CmaCh04G008340Csa4G097640Cucumber (Chinese Long) v2cmacuB711
CmaCh04G008340MELO3C018978Melon (DHL92) v3.5.1cmameB698
CmaCh04G008340ClCG10G008710Watermelon (Charleston Gray)cmawcgB614
CmaCh04G008340CSPI04G08750Wild cucumber (PI 183967)cmacpiB717
CmaCh04G008340CmoCh16G007810Cucurbita moschata (Rifu)cmacmoB700
CmaCh04G008340CmoCh04G008920Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G008340Lsi03G009150Bottle gourd (USVL1VR-Ls)cmalsiB664
CmaCh04G008340Cp4.1LG14g00940Cucurbita pepo (Zucchini)cmacpeB714
CmaCh04G008340Cp4.1LG01g09120Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G008340MELO3C018978.2Melon (DHL92) v3.6.1cmamedB788
CmaCh04G008340CsaV3_4G008970Cucumber (Chinese Long) v3cmacucB0845
CmaCh04G008340Cla97C10G192050Watermelon (97103) v2cmawmbB718
CmaCh04G008340Bhi11G000813Wax gourdcmawgoB0822
CmaCh04G008340CsGy4G008580Cucumber (Gy14) v2cgybcmaB544
CmaCh04G008340Carg05839Silver-seed gourdcarcmaB1414
CmaCh04G008340Carg14234Silver-seed gourdcarcmaB1288
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G008340CmaCh16G007230Cucurbita maxima (Rimu)cmacmaB350
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G008340Cucurbita moschata (Rifu)cmacmoB727
CmaCh04G008340Wild cucumber (PI 183967)cmacpiB785
CmaCh04G008340Melon (DHL92) v3.5.1cmameB710
CmaCh04G008340Watermelon (Charleston Gray)cmawcgB639
CmaCh04G008340Watermelon (97103) v1cmawmB715
CmaCh04G008340Cucurbita pepo (Zucchini)cmacpeB702
CmaCh04G008340Cucurbita pepo (Zucchini)cmacpeB741
CmaCh04G008340Bottle gourd (USVL1VR-Ls)cmalsiB639
CmaCh04G008340Melon (DHL92) v3.6.1cmamedB804
CmaCh04G008340Cucumber (Chinese Long) v3cmacucB0917
CmaCh04G008340Watermelon (97103) v2cmawmbB712
CmaCh04G008340Wax gourdcmawgoB0883
CmaCh04G008340Cucurbita maxima (Rimu)cmacmaB546