Carg14234 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCTATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGTATGTTTCCAGTTCATTGCATTCTCACTCTGCTATCTAAAATGAATCCCTAGGTTTTCATTGTGGTGTTCTGTACTTTTTCTGTTGAATTTATGTGCGTTTTGTTTGTGGTTTTTATTTTGGATTGCTTTGCTTGCGTTGTTCTTTGTCGATTCTTATGGTATAACGATGAGCTGATTTGCGATTTCCTTTGGATGTACGTGGTTCTGAACTTTTTTGTTTTCTGAATTCTCTCTTAGGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAAGTAAGAACTTTTATTGAAGCCATGTGATTTATTCTTTTGCAAGCTTATCGTGTTAACCCGTAAGTAATTGTCTTTTGCCATCTCTTTTTTATCTCAACAAATGAGTGCAAAGCTACTGAGATACCCTTTTCAAATTTTTTGGATCACTTGGCTTTTCATTTTTCAAATTTTTTGGATTGCTTGCCCTTTGATTTATCTATCTATTTCTGCTTTCAATATCTTCCCATAGTCTGGATTATGGCTTGATTCCACCGTAAAATACCTTCCTTGGGTAACTTGGACGATTTTTGTCTGTGTTAACTATTGAGAATTTGGAGTCCTCTTTTTTTTAATATTTTAATTTATGGTGCTGTTGCCTTCTTTTTTTTTTAAAATGGGTTTTGGTTTTTCCCTGCATGCGTATTTCTTTCATTTCTCGTATGACCTTTCGAAGTTAGTTGCAGTGATGATATCATCAAACTTGATAGTATATACAAATGCTACATGAAAGGTCGACAATTATGTCGACCTGAGCGGTTAATCGAGCAACCTAACTTCTCTAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTCTTGCTTGTATTCAAGTTTCTTTTAAAATTGTTCTTCTCTAACTTCTCTTATTATTTTGTTGTCCATCAAAGTTTCTGTGTCTTCAGTCATAATAGGAAATTTGCTATTTCGAGATGGAAATCAGTATTTCTTATTGAAGTTTGAACTTTTATAGCTCTTGTCAATTAGGAAACACCATTTTGGAATAACTGATACTATAATGTATATGTTTTCATTTTTCGGTTTGAGATTGCTTCATCCTATGAAAGGTTTGATGGTTACTTTTGCTCACAGCTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTGAGTAGTTCTCACTTTTATATCTGTAAGATTTTGTATTGGATTAGAACTGTATGAGTAAATTGTAGGATGTCATCAATTGATTAAGTTTCTTAAGGCAAATTTAGAACCGTGCGTTCTTGTAAATCTATAGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGTAATTGCCTTCTGAACTGAAATCCTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTGATAAATGAGCTAATAATTTTTTTTTGTTGCAACCTCTCAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGGAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAAGAACATAGGAACGTGAATTATGGAAAAAAAATCTTATTACCTTAGAGTATATCAATGTTTGATATTTTTAATA CCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCTATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGGAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAAGAACATAGGAACGTGAATTATGGAAAAAAAATCTTATTACCTTAGAGTATATCAATGTTTGATATTTTTAATA ATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGA MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPRAAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
BLAST of Carg14234 vs. NCBI nr
Match: XP_022943255.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 301.6 bits (771), Expect = 2.8e-78 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Carg14234 vs. NCBI nr
Match: XP_022943256.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 297.4 bits (760), Expect = 5.3e-77 Identity = 271/282 (96.10%), Postives = 271/282 (96.10%), Query Frame = 0
BLAST of Carg14234 vs. NCBI nr
Match: XP_022990791.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 283.5 bits (724), Expect = 7.9e-73 Identity = 271/282 (96.10%), Postives = 275/282 (97.52%), Query Frame = 0
BLAST of Carg14234 vs. NCBI nr
Match: XP_022990797.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71 Identity = 260/282 (92.20%), Postives = 264/282 (93.62%), Query Frame = 0
BLAST of Carg14234 vs. NCBI nr
Match: XP_023552927.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71 Identity = 260/282 (92.20%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of Carg14234 vs. TAIR10
Match: AT4G38100.1 (unknown protein) HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23 Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of Carg14234 vs. TAIR10
Match: AT4G01150.1 (unknown protein) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-18 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Carg14234 vs. TAIR10
Match: AT2G46820.1 (photosystem I P subunit) HSP 1 Score: 61.6 bits (148), Expect = 8.9e-10 Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of Carg14234 vs. TAIR10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 49.7 bits (117), Expect = 3.5e-06 Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q8LDD3|CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 7.4e-22 Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0
BLAST of Carg14234 vs. Swiss-Prot
Match: sp|O04616|CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17 Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q8LCA1|CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08 Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q119Z5|SYE_TRIEI (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 21/56 (37.50%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q9M812|CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 6.3e-05 Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of Carg14234 vs. TrEMBL
Match: tr|A0A0A0KZ51|A0A0A0KZ51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 2.0e-40 Identity = 115/282 (40.78%), Postives = 140/282 (49.65%), Query Frame = 0
BLAST of Carg14234 vs. TrEMBL
Match: tr|A0A1S3C1G0|A0A1S3C1G0_CUCME (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.9e-38 Identity = 125/282 (44.33%), Postives = 148/282 (52.48%), Query Frame = 0
BLAST of Carg14234 vs. TrEMBL
Match: tr|A0A1S3C1A4|A0A1S3C1A4_CUCME (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 5.5e-30 Identity = 108/236 (45.76%), Postives = 122/236 (51.69%), Query Frame = 0
BLAST of Carg14234 vs. TrEMBL
Match: tr|M5W986|M5W986_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G196600 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24 Identity = 55/82 (67.07%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of Carg14234 vs. TrEMBL
Match: tr|D7SSS3|D7SSS3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0199g00150 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23 Identity = 56/86 (65.12%), Postives = 74/86 (86.05%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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