Carg14234 (gene) Silver-seed gourd

NameCarg14234
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein CURVATURE THYLAKOID 1A, chloroplastic
LocationCucurbita_argyrosperma_scaffold_045 : 740915 .. 743438 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCTATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGTATGTTTCCAGTTCATTGCATTCTCACTCTGCTATCTAAAATGAATCCCTAGGTTTTCATTGTGGTGTTCTGTACTTTTTCTGTTGAATTTATGTGCGTTTTGTTTGTGGTTTTTATTTTGGATTGCTTTGCTTGCGTTGTTCTTTGTCGATTCTTATGGTATAACGATGAGCTGATTTGCGATTTCCTTTGGATGTACGTGGTTCTGAACTTTTTTGTTTTCTGAATTCTCTCTTAGGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAAGTAAGAACTTTTATTGAAGCCATGTGATTTATTCTTTTGCAAGCTTATCGTGTTAACCCGTAAGTAATTGTCTTTTGCCATCTCTTTTTTATCTCAACAAATGAGTGCAAAGCTACTGAGATACCCTTTTCAAATTTTTTGGATCACTTGGCTTTTCATTTTTCAAATTTTTTGGATTGCTTGCCCTTTGATTTATCTATCTATTTCTGCTTTCAATATCTTCCCATAGTCTGGATTATGGCTTGATTCCACCGTAAAATACCTTCCTTGGGTAACTTGGACGATTTTTGTCTGTGTTAACTATTGAGAATTTGGAGTCCTCTTTTTTTTAATATTTTAATTTATGGTGCTGTTGCCTTCTTTTTTTTTTAAAATGGGTTTTGGTTTTTCCCTGCATGCGTATTTCTTTCATTTCTCGTATGACCTTTCGAAGTTAGTTGCAGTGATGATATCATCAAACTTGATAGTATATACAAATGCTACATGAAAGGTCGACAATTATGTCGACCTGAGCGGTTAATCGAGCAACCTAACTTCTCTAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTTTCTTGCTTGTATTCAAGTTTCTTTTAAAATTGTTCTTCTCTAACTTCTCTTATTATTTTGTTGTCCATCAAAGTTTCTGTGTCTTCAGTCATAATAGGAAATTTGCTATTTCGAGATGGAAATCAGTATTTCTTATTGAAGTTTGAACTTTTATAGCTCTTGTCAATTAGGAAACACCATTTTGGAATAACTGATACTATAATGTATATGTTTTCATTTTTCGGTTTGAGATTGCTTCATCCTATGAAAGGTTTGATGGTTACTTTTGCTCACAGCTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTGAGTAGTTCTCACTTTTATATCTGTAAGATTTTGTATTGGATTAGAACTGTATGAGTAAATTGTAGGATGTCATCAATTGATTAAGTTTCTTAAGGCAAATTTAGAACCGTGCGTTCTTGTAAATCTATAGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGTAATTGCCTTCTGAACTGAAATCCTGTATTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTGATAAATGAGCTAATAATTTTTTTTTGTTGCAACCTCTCAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGGAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAAGAACATAGGAACGTGAATTATGGAAAAAAAATCTTATTACCTTAGAGTATATCAATGTTTGATATTTTTAATA

mRNA sequence

CCTCTTCCAATGTATAAGAAACACTCGTTCCTCTACCAACCCCATTTCATCTTCGATTTCACCCACCTCTTCACAGACTCCCCTCTCCCGCTATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGAGATTGACGTCTCATTCGGTCTGTAAATTTTTACTGTTAAATCTTAGGGAGATAGTTATGTTTGCATAGATAGATATCTTGGATGTGCTGATGAACATAAATGATATAAATAATTACATTTTGTTTCTAATGAAGCACATATTACAACGATAGAATCTTGTTTTACATATAGGTATTATAAATAAGAACATAGGAACGTGAATTATGGAAAAAAAATCTTATTACCTTAGAGTATATCAATGTTTGATATTTTTAATA

Coding sequence (CDS)

ATGGCGATGGAACTCTGTGCATGCCGCCCCATTTCCGACCTCCCCGTTTCTTCTCCCCTTCTTGCCAGAAACCAGCACCTCCGTCCCAAGCACGCGCTTCCTCTCAAAATGCCCGTAGCCTCGCGTCTTGCTCGCGGCATCCACTTCCGATATCGTCATTTTTCTGTTTCACTGCCGAGAGCAGCAGCATCTGAGGAATCATATGGATCTAGTCCATATATTACTGAAGAACGCGACAGCGCGGCGGTCTCGGAAGATTCTTCTCCTGCTTCTTCGGTCGCCGTGGAAGATTCTCCTCCTGCTTCTTCGGTAGCCGTGGAAGATTCTCCTCCTGCTTCTTCAGTCGCCGAGGAGAACCTTCCCGCGGAGAATCTTTCATCTGACGAAATTGTAACACCTGAAGTGCCGAAAGAAGAACCGGTTGAGGACGCGCCCGTTGTAGCGGTGGAGGATTCTCTATCTGCATCTTCAGCTACCGTGGGAGATTCTTCTTCTGCTGAGAATGTTGCGTACAATGAAACTTCGACAGCTGAAGAACCCAAAGAAGAACCTAAAGAAAAACCAGTTGAGGTTGCGCAAGAATGGACGCTTGATTCATTGATTGATCTGAAACTCGAGTCGGTTGATAAATACAGTCTTGCCCTGTATGGTGGTGGTGCCTCTTTTGGCCTCTGGTTGGTTTCAGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGTTGTTGGAAATTGTGGGGCTTGGTTACACACTGTGGTTCGCGGCTCGCTTTCTGTTATTCAAGGAAAGTAGAGACGAATTGGCTGCCAAGATTGATGAGATAAAGGAGCAGGTTATTGGTTGA

Protein sequence

MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPRAAASEESYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAVEDSPPASSVAEENLPAENLSSDEIVTPEVPKEEPVEDAPVVAVEDSLSASSATVGDSSSAENVAYNETSTAEEPKEEPKEKPVEVAQEWTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
BLAST of Carg14234 vs. NCBI nr
Match: XP_022943255.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 301.6 bits (771), Expect = 2.8e-78
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0

Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 282

BLAST of Carg14234 vs. NCBI nr
Match: XP_022943256.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 297.4 bits (760), Expect = 5.3e-77
Identity = 271/282 (96.10%), Postives = 271/282 (96.10%), Query Frame = 0

Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AAASEESYGSSPYITEERDSAAVSEDSSPA           XXXXXXXXXXXXXXXXXXX
Sbjct: 61  AAASEESYGSSPYITEERDSAAVSEDSSPA-----------XXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

BLAST of Carg14234 vs. NCBI nr
Match: XP_022990791.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 283.5 bits (724), Expect = 7.9e-73
Identity = 271/282 (96.10%), Postives = 275/282 (97.52%), Query Frame = 0

Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMP+ASRL RGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AAAS++SYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           XXXXXXXXXXXXXX TLDSL DLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLV
Sbjct: 181 XXXXXXXXXXXXXXWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 282

BLAST of Carg14234 vs. NCBI nr
Match: XP_022990797.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71
Identity = 260/282 (92.20%), Postives = 264/282 (93.62%), Query Frame = 0

Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPKHALPLKMP+ASRL RGIHFRYRHFSVSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AAAS++SYGSSPYITEERDSAAVSEDSSPA           XXXXXXXXXXXXXXXXXXX
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPA-----------XXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           XXXXXXXXXXXXXX TLDSL DLKLESVDKYSLALYGGGA FGLWLVS VVGA DSIPLV
Sbjct: 181 XXXXXXXXXXXXXXWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYT+WFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

BLAST of Carg14234 vs. NCBI nr
Match: XP_023552927.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71
Identity = 260/282 (92.20%), Postives = 262/282 (92.91%), Query Frame = 0

Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MAMELCACRPISDLPVSSPLLARNQ LRPK ALPLKMPVASRLARGIHFRYRHFS SLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKCALPLKMPVASRLARGIHFRYRHFSASLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AAAS++SYGSS YITEERDSAAVSEDSSPA           XXXXXXXXXXXXXXXXXXX
Sbjct: 61  AAASDDSYGSSSYITEERDSAAVSEDSSPA-----------XXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 180

Query: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           XXXXXXXXXXXX   TLDSL DLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV
Sbjct: 181 XXXXXXXXXXXXQEWTLDSLNDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG
Sbjct: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 271

BLAST of Carg14234 vs. TAIR10
Match: AT4G38100.1 (unknown protein)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0

Query: 197 LDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFA 256
           L+ L D+KL+S   YS+ LYG GA   L+L SA+V ++++IPL PKL+E+VGLGYTLWF 
Sbjct: 104 LEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFT 163

Query: 257 ARFLLFKESRDELAAKIDEIKEQVIG 283
            R+LLFK +R+EL  K+ EIK+QV+G
Sbjct: 164 TRYLLFKRNREELKTKVSEIKKQVLG 189

BLAST of Carg14234 vs. TAIR10
Match: AT4G01150.1 (unknown protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-18
Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 0

Query: 209 DKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDE 268
           +K ++ +YGGGA   +WL S VVGA++S+PL+PK++E+VGLGYT WF  R+LLFK SR E
Sbjct: 89  NKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKE 148

Query: 269 LAAKIDEIKEQVIG 283
           LA  I+ +K+++ G
Sbjct: 149 LAEDIESLKKKIAG 162

BLAST of Carg14234 vs. TAIR10
Match: AT2G46820.1 (photosystem I P subunit)

HSP 1 Score: 61.6 bits (148), Expect = 8.9e-10
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0

Query: 209 DKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDE 268
           DKY++          LW  + ++ A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ 
Sbjct: 99  DKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREA 158

Query: 269 LAAKIDEIKEQVIG 283
           L  K+    + ++G
Sbjct: 159 LFEKVKSTYKDILG 172

BLAST of Carg14234 vs. TAIR10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 49.7 bits (117), Expect = 3.5e-06
Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0

Query: 206 ESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKES 265
           +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 266 RDELAAKIDEIKEQVIG 283
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q8LDD3|CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.4e-22
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0

Query: 197 LDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFA 256
           L+ L D+KL+S   YS+ LYG GA   L+L SA+V ++++IPL PKL+E+VGLGYTLWF 
Sbjct: 104 LEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFT 163

Query: 257 ARFLLFKESRDELAAKIDEIKEQVIG 283
            R+LLFK +R+EL  K+ EIK+QV+G
Sbjct: 164 TRYLLFKRNREELKTKVSEIKKQVLG 189

BLAST of Carg14234 vs. Swiss-Prot
Match: sp|O04616|CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17
Identity = 40/74 (54.05%), Postives = 58/74 (78.38%), Query Frame = 0

Query: 209 DKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDE 268
           +K ++ +YGGGA   +WL S VVGA++S+PL+PK++E+VGLGYT WF  R+LLFK SR E
Sbjct: 89  NKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKE 148

Query: 269 LAAKIDEIKEQVIG 283
           LA  I+ +K+++ G
Sbjct: 149 LAEDIESLKKKIAG 162

BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q8LCA1|CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0

Query: 209 DKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDE 268
           DKY++          LW  + ++ A+D +PLVP +LE+VG+GYT WF  + L+FK  R+ 
Sbjct: 99  DKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREA 158

Query: 269 LAAKIDEIKEQVIG 283
           L  K+    + ++G
Sbjct: 159 LFEKVKSTYKDILG 172

BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q119Z5|SYE_TRIEI (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05
Identity = 21/56 (37.50%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 227 VSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           ++ V+ A+D IP++  + E++G+ Y +WF  R+LL + +R EL  KI+ IK ++ G
Sbjct: 823 MAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDKIENIKREIFG 878

BLAST of Carg14234 vs. Swiss-Prot
Match: sp|Q9M812|CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.3e-05
Identity = 23/77 (29.87%), Postives = 41/77 (53.25%), Query Frame = 0

Query: 206 ESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKES 265
           +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WF  R+LLFK  
Sbjct: 79  KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPD 138

Query: 266 RDELAAKIDEIKEQVIG 283
           R EL+  + +    ++G
Sbjct: 139 RQELSKIVKKSVADILG 155

BLAST of Carg14234 vs. TrEMBL
Match: tr|A0A0A0KZ51|A0A0A0KZ51_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.0e-40
Identity = 115/282 (40.78%), Postives = 140/282 (49.65%), Query Frame = 0

Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL  N +LRP+ ALPL++ ++S     +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPL-----FSTLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AAAS+ES GSS + TE+RDS  V EDS  A                              
Sbjct: 61  AAASDESNGSSSFFTEQRDSVTVLEDSPSA------------------------------ 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                                                       
Sbjct: 121 ----------SSLTLEDSPPEEIPSDVLAATEVPKQEPVEDVPVITLDDSSSAGKVEMVT 180

Query: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
                            + L DLKLESVD YSLALYG GA FG+WLVSA+VGAVDSIPLV
Sbjct: 181 SEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLV 237

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLE+VGLGY++WF AR+LLFKESRDELAA+IDE+KEQV+G
Sbjct: 241 PKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVLG 237

BLAST of Carg14234 vs. TrEMBL
Match: tr|A0A1S3C1G0|A0A1S3C1G0_CUCME (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.9e-38
Identity = 125/282 (44.33%), Postives = 148/282 (52.48%), Query Frame = 0

Query: 1   MAMELCACRPISDLPVSSPLLARNQHLRPKHALPLKMPVASRLARGIHFRYRHFSVSLPR 60
           MA++L A  P+      S LL    HLRP+ ALPL++ ++S     +H R+RHF+VSLPR
Sbjct: 1   MAIDLSASPPL-----FSTLLTGKPHLRPRPALPLRIAISSACTTSLHSRHRHFAVSLPR 60

Query: 61  AAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           AAAS+E   SSP+ TE+RDS  V EDS  A                              
Sbjct: 61  AAASDE---SSPFFTEQRDSVTVLEDSPSA------------------------------ 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                                                      X
Sbjct: 121 ------------------SSLTLEDSPPEEIPSDGIAATEVPKQEPVEDVPVVTLVEIAX 180

Query: 181 XXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLV 240
           XXXXXXXXXX       + L DLKLESVD YSLALYG GA FG+WLVSA+VGAVDSIPLV
Sbjct: 181 XXXXXXXXXXGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWLVSAIVGAVDSIPLV 226

Query: 241 PKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           PKLLE+VGLGY++WF AR+LLFKESRDELAA+IDE+KEQV G
Sbjct: 241 PKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFG 226

BLAST of Carg14234 vs. TrEMBL
Match: tr|A0A1S3C1A4|A0A1S3C1A4_CUCME (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 5.5e-30
Identity = 108/236 (45.76%), Postives = 122/236 (51.69%), Query Frame = 0

Query: 48  HFR-YRHFSVSLPRAAASEESYGSSPYITEERDSAAVSEDSSPAXXXXXXXXXXXXXXXX 107
           HF  +RHF+VSLPRAAAS+E   SSP+ TE+RDS  V EDS  A                
Sbjct: 11  HFMGHRHFAVSLPRAAASDE---SSPFFTEQRDSVTVLEDSPSA---------------- 70

Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 167
                                                                       
Sbjct: 71  --------------------------------SSLTLEDSPPEEIPSDGIAATEVPKQEP 130

Query: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDSLIDLKLESVDKYSLALYGGGASFGLWL 227
                        XXXXXXXXXXX       + L DLKLESVD YSLALYG GA FG+WL
Sbjct: 131 VEDVPVVTLVEIAXXXXXXXXXXXGAQEQAFEFLNDLKLESVDTYSLALYGAGAFFGIWL 190

Query: 228 VSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFLLFKESRDELAAKIDEIKEQVIG 283
           VSA+VGAVDSIPLVPKLLE+VGLGY++WF AR+LLFKESRDELAA+IDE+KEQV G
Sbjct: 191 VSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARIDELKEQVFG 195

BLAST of Carg14234 vs. TrEMBL
Match: tr|M5W986|M5W986_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G196600 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 55/82 (67.07%), Postives = 71/82 (86.59%), Query Frame = 0

Query: 201 IDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFAARFL 260
           +D+KL+S D YS+ +YGGGA F LWL SAVVGA+DSIPL PKLLE+VGLGYT+WF+ R+L
Sbjct: 124 LDIKLDSDDTYSVLIYGGGALFALWLASAVVGAIDSIPLFPKLLEVVGLGYTIWFSTRYL 183

Query: 261 LFKESRDELAAKIDEIKEQVIG 283
           +FKE+R+EL AKI  +K+QV+G
Sbjct: 184 IFKENREELFAKIQVLKQQVLG 205

BLAST of Carg14234 vs. TrEMBL
Match: tr|D7SSS3|D7SSS3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0199g00150 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23
Identity = 56/86 (65.12%), Postives = 74/86 (86.05%), Query Frame = 0

Query: 197 LDSLIDLKLESVDKYSLALYGGGASFGLWLVSAVVGAVDSIPLVPKLLEIVGLGYTLWFA 256
           LD+L ++K +S D YS+ LYG GA   LW  SA+VGA+DSIP+ PKL+EIVGLGYTLWF+
Sbjct: 116 LDNL-NIKFDSEDPYSIFLYGTGALTALWFASAIVGAIDSIPIFPKLMEIVGLGYTLWFS 175

Query: 257 ARFLLFKESRDELAAKIDEIKEQVIG 283
           AR+L+FK++RDELAAKI+E+K+QV+G
Sbjct: 176 ARYLIFKQNRDELAAKIEELKQQVLG 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022943255.12.8e-78100.00protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschat... [more]
XP_022943256.15.3e-7796.10protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschat... [more]
XP_022990791.17.9e-7396.10protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita maxima][more]
XP_022990797.11.5e-7192.20protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima][more]
XP_023552927.11.5e-7192.20protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G38100.14.1e-2356.98unknown protein[more]
AT4G01150.11.8e-1854.05unknown protein[more]
AT2G46820.18.9e-1036.49photosystem I P subunit[more]
AT1G52220.13.5e-0629.87FUNCTIONS IN: molecular_function unknown[more]
Match NameE-valueIdentityDescription
sp|Q8LDD3|CUT1D_ARATH7.4e-2256.98Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|O04616|CUT1A_ARATH3.2e-1754.05Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q8LCA1|CUT1B_ARATH1.6e-0836.49Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q119Z5|SYE_TRIEI1.7e-0537.50Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=... [more]
sp|Q9M812|CUT1C_ARATH6.3e-0529.87Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KZ51|A0A0A0KZ51_CUCSA2.0e-4040.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 SV=1[more]
tr|A0A1S3C1G0|A0A1S3C1G0_CUCME1.9e-3844.33protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656... [more]
tr|A0A1S3C1A4|A0A1S3C1A4_CUCME5.5e-3045.76protein CURVATURE THYLAKOID 1D, chloroplastic isoform X2 OS=Cucumis melo OX=3656... [more]
tr|M5W986|M5W986_PRUPE1.5e-2467.07Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G196600 PE=4 SV=1[more]
tr|D7SSS3|D7SSS3_VITVI1.0e-2365.12Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0199g00150 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
Vocabulary: INTERPRO
TermDefinition
IPR033344CURT1
IPR025564CAAD_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009579 thylakoid
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14234-RACarg14234-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 209..282
e-value: 9.6E-24
score: 82.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..187
NoneNo IPR availablePANTHERPTHR33222:SF2PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTICcoord: 144..282
IPR033344Protein CURVATURE THYLAKOID 1PANTHERPTHR33222FAMILY NOT NAMEDcoord: 144..282

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg14234Carg05839Silver-seed gourdcarcarB646