CmaCh03G014360 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G014360
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPhotosystem I reaction center subunit X psaK
LocationCma_Chr03 : 8990346 .. 8991355 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTACCATGATGACTTCGATCCCTCAGTTTACTGGGCTCAGGCCCACTGTTTCGGTGGCTCCGGTTCGCAGCCTGGTAAGTCCCCTTCGCCGCCGTAGCCGTCGGCTTTGAATGATCGGAATAGCTGTAATGGGTTTGATTTTGCAGGTGGCAGTGCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACCTGGTAACTCTAAATTTCTACTACTCATCTTACTCTCTAAATTATTTTCTCTGTTTTCGATTTCCTTCTTTCTTTCATAATTTCAAAAATTTGTATTACTATCACTAAAAAATAGAAACTAAAAGTTAGATGACTAGTTTATGCGTAGAAAAATTAATCTGATTAGAATGGAGGAGTCTATAAACAAACTAAAACTGTATATATATATATATATATATATGGTTGAAATTAATGGGTGGATTAACAGAAATTCATTCAATAATGAATATTGTAACACTTGTTTCAATTTAAGATAATCTGTTGGTAATAAAATCAAGGAGCAGAACAAATGGCATAAAATAACGGACGATGAAAACAGATAATGGTTATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCCGCAAACAGGAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGAGTCTGGGTTACAGACGGGCGACCCAGCAGGTTTCACCCTGGCTGATACTTTGGCATGTGGCAGCGTGGGGCACATCATCGGCGTCGGTGTTGTTCTTGGGCTTAAGAGCATTGGTTCCCTGTAGAAATCATCCTCTTTTTTTTTTGTCTGTTTTTAAATCAAAACGTACGATTCTGCTGTTCAATCTAAAGCTGTCTTTGCCATTTTGATTTTATATATGACTCAGAATATTAAATTACAACTCCACTTCCTCTCAACTTACAATTTTGTCATAAACTTTATATAATTTTAAAATCTTCCAACTGTTTAACAAA

mRNA sequence

ATGGCCACTACCATGATGACTTCGATCCCTCAGTTTACTGGGCTCAGGCCCACTGTTTCGGTGGCTCCGGTTCGCAGCCTGGTGGCAGTGCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACCTGATAATGGTTATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCCGCAAACAGGAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGAGTCTGGGTTACAGACGGGCGACCCAGCAGGTTTCACCCTGGCTGATACTTTGGCATGTGGCAGCGTGGGGCACATCATCGGCGTCGGTGTTGTTCTTGGGCTTAAGAGCATTGGTTCCCTGTAGAAATCATCCTCTTTTTTTTTTGTCTGTTTTTAAATCAAAACGTACGATTCTGCTGTTCAATCTAAAGCTGTCTTTGCCATTTTGATTTTATATATGACTCAGAATATTAAATTACAACTCCACTTCCTCTCAACTTACAATTTTGTCATAAACTTTATATAATTTTAAAATCTTCCAACTGTTTAACAAA

Coding sequence (CDS)

ATGGCCACTACCATGATGACTTCGATCCCTCAGTTTACTGGGCTCAGGCCCACTGTTTCGGTGGCTCCGGTTCGCAGCCTGGTGGCAGTGCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACCTGATAATGGTTATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCCGCAAACAGGAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGAGTCTGGGTTACAGACGGGCGACCCAGCAGGTTTCACCCTGGCTGATACTTTGGCATGTGGCAGCGTGGGGCACATCATCGGCGTCGGTGTTGTTCTTGGGCTTAAGAGCATTGGTTCCCTGTAG

Protein sequence

MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL
Homology
[Close]
BLAST of CmaCh03G014360 vs. Swiss-Prot
Match: PSAK_ARATH (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana GN=PSAK PE=2 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 8.5e-50
Identity = 102/131 (77.86%), Postives = 120/131 (91.60%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60
           MA+TMMT++PQF GLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV 
Sbjct: 1   MASTMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKC-DFIGSSTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGL+LEAR+SGLQTGDPAGFTLADTLACG+VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKSIGSL 131
           VVLGLK+IG++
Sbjct: 121 VVLGLKNIGAI 130

[Close]
BLAST of CmaCh03G014360 vs. Swiss-Prot
Match: PSAK_MEDSA (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa GN=PSAK PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.0e-47
Identity = 97/128 (75.78%), Postives = 115/128 (89.84%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPL-RRRGGGALSARCGDYIGSPTNLIMVI 60
           MAT+MMT++PQFTGLRP +  +P++ LVA QP+ RR+G GAL  RC D+IGS TN+IMV 
Sbjct: 1   MATSMMTTLPQFTGLRPQLKPSPIQGLVAAQPMTRRKGKGALGVRC-DFIGSSTNVIMVA 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKSI 128
           VVLGL+++
Sbjct: 121 VVLGLRTL 127

[Close]
BLAST of CmaCh03G014360 vs. Swiss-Prot
Match: PSAK_HORVU (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare GN=PSAK PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-39
Identity = 90/125 (72.00%), Postives = 103/125 (82.40%), Query Frame = 1 

Query: 6   MTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLML 65
           MTS+PQF GLR   + +  RS+  +  LRRR    +  RC DYIGS TNLIMV +T+LML
Sbjct: 8   MTSVPQFHGLR---TYSSPRSMATLPSLRRRRSQGI--RC-DYIGSSTNLIMVTTTTLML 67

Query: 66  FAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLK 125
           FAGRFGLAPSANRK+TAGLKLEARESGLQTGDPAGFTLADTLACG+VGHI+GVG+VLGLK
Sbjct: 68  FAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVGIVLGLK 126

Query: 126 SIGSL 131
           + G L
Sbjct: 128 NTGVL 126

[Close]
BLAST of CmaCh03G014360 vs. Swiss-Prot
Match: PSAK_CHLRE (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAK PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.3e-20
Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 1 

Query: 29  AVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKL-- 88
           A++P +     ++  R   +IGS TNLIMV ST+  L A RFGLAP+  + +TAGLKL  
Sbjct: 10  AIRPTKAARRSSVVVRADGFIGSSTNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVD 69

Query: 89  EARESGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL 131
               +G+ + DPAGFT+ D LA G+ GH +GVG+VLGLK IG+L
Sbjct: 70  SKNSAGVISNDPAGFTIVDVLAMGAAGHGLGVGIVLGLKGIGAL 113

[Close]
BLAST of CmaCh03G014360 vs. Swiss-Prot
Match: PSAK_CUCSA (Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis sativus GN=PSAK PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.6e-10
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 1 

Query: 47 DYIGSPTNLIMVISTSLMLFAGRFGLAPSANR 79
          DYIGSPTN+IMVISTSLMLFAGRFGLAPSANR
Sbjct: 2  DYIGSPTNVIMVISTSLMLFAGRFGLAPSANR 33

[Close]
BLAST of CmaCh03G014360 vs. TrEMBL
Match: A0A0A0KM49_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525340 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-56
Identity = 119/128 (92.97%), Postives = 122/128 (95.31%), Query Frame = 1 

Query: 3   TTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 62
           TTMMT +PQF GLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS
Sbjct: 5   TTMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 64

Query: 63  LMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGVVL 122
           LMLFAGRFGLAPSANRKSTAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHIIGVGVVL
Sbjct: 65  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVL 124

Query: 123 GLKSIGSL 131
           GLK IGSL
Sbjct: 125 GLKGIGSL 131

[Close]
BLAST of CmaCh03G014360 vs. TrEMBL
Match: A0A061DVW2_THECC (Photosystem I subunit K OS=Theobroma cacao GN=TCM_006076 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-51
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA T MT++PQF+GLRP +S APVR L AVQP+RR+G GAL ARCG YIGSPTNLIMV +
Sbjct: 1   MAATAMTTLPQFSGLRPRISAAPVRGLAAVQPMRRKGKGALGARCG-YIGSPTNLIMVTT 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRK+TAGLKLEAR+SGLQTGDPAGFTLADTLACGSVGHIIGVG+
Sbjct: 61  TSLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGI 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 129

[Close]
BLAST of CmaCh03G014360 vs. TrEMBL
Match: I3SM84_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.1e-51
Identity = 106/130 (81.54%), Postives = 120/130 (92.31%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MATT+MT++PQF+GLRP  S  PV++LV VQP+RR+G GAL ARC D+IGSPTNLIMV S
Sbjct: 1   MATTVMTTLPQFSGLRPKFSATPVQNLVTVQPMRRKGNGALGARC-DFIGSPTNLIMVAS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           T+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHIIGVGV
Sbjct: 61  TTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IGSL
Sbjct: 121 VLGLKNIGSL 129

[Close]
BLAST of CmaCh03G014360 vs. TrEMBL
Match: A0A151SSA9_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_003994 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-50
Identity = 107/130 (82.31%), Postives = 121/130 (93.08%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MATT+MT++PQFTGLRP  S APV++LVAVQP+RR+G GAL ARC D+IGS TNLIMV S
Sbjct: 1   MATTVMTTLPQFTGLRPQFSAAPVQNLVAVQPMRRKGKGALGARC-DFIGSSTNLIMVAS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           T+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHIIGVGV
Sbjct: 61  TTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 129

[Close]
BLAST of CmaCh03G014360 vs. TrEMBL
Match: K7MCH3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G194300 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.0e-50
Identity = 107/130 (82.31%), Postives = 120/130 (92.31%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MATT+MT++PQF+GLRP  S APV++LVAVQP+ R+G GAL ARC DYIGS TNLIMV S
Sbjct: 1   MATTVMTTLPQFSGLRPQFSAAPVKNLVAVQPMSRKGKGALGARC-DYIGSSTNLIMVAS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           T+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 129

[Close]
BLAST of CmaCh03G014360 vs. TAIR10
Match: AT1G30380.1 (AT1G30380.1 photosystem I subunit K)

HSP 1 Score: 197.6 bits (501), Expect = 4.8e-51
Identity = 102/131 (77.86%), Postives = 120/131 (91.60%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60
           MA+TMMT++PQF GLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV 
Sbjct: 1   MASTMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKC-DFIGSSTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGL+LEAR+SGLQTGDPAGFTLADTLACG+VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKSIGSL 131
           VVLGLK+IG++
Sbjct: 121 VVLGLKNIGAI 130

[Close]
BLAST of CmaCh03G014360 vs. NCBI nr
Match: gi|659078148|ref|XP_008439573.1| (PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-59
Identity = 123/130 (94.62%), Postives = 125/130 (96.15%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA TMMT +PQF GLRPT SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS
Sbjct: 1   MAATMMTFVPQFNGLRPTASVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRKSTAGLKLEAR+SGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK IGSL
Sbjct: 121 VLGLKGIGSL 130

[Close]
BLAST of CmaCh03G014360 vs. NCBI nr
Match: gi|449433712|ref|XP_004134641.1| (PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-56
Identity = 119/128 (92.97%), Postives = 122/128 (95.31%), Query Frame = 1 

Query: 3   TTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 62
           TTMMT +PQF GLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS
Sbjct: 5   TTMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTS 64

Query: 63  LMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGVVL 122
           LMLFAGRFGLAPSANRKSTAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHIIGVGVVL
Sbjct: 65  LMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVL 124

Query: 123 GLKSIGSL 131
           GLK IGSL
Sbjct: 125 GLKGIGSL 131

[Close]
BLAST of CmaCh03G014360 vs. NCBI nr
Match: gi|590681566|ref|XP_007041118.1| (Photosystem I subunit K [Theobroma cacao])

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-51
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA T MT++PQF+GLRP +S APVR L AVQP+RR+G GAL ARCG YIGSPTNLIMV +
Sbjct: 1   MAATAMTTLPQFSGLRPRISAAPVRGLAAVQPMRRKGKGALGARCG-YIGSPTNLIMVTT 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRK+TAGLKLEAR+SGLQTGDPAGFTLADTLACGSVGHIIGVG+
Sbjct: 61  TSLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGI 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 129

[Close]
BLAST of CmaCh03G014360 vs. NCBI nr
Match: gi|1009105558|ref|XP_015879055.1| (PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 209.5 bits (532), Expect = 3.4e-51
Identity = 105/130 (80.77%), Postives = 119/130 (91.54%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MATT+ TS+PQF GLRPT+S APV+SL AVQP++R+  GAL ARC  +IGSPTNLI+V S
Sbjct: 1   MATTVATSLPQFNGLRPTISAAPVKSLAAVQPMKRKANGALGARCDGFIGSPTNLIIVTS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           T+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TTLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 130

[Close]
BLAST of CmaCh03G014360 vs. NCBI nr
Match: gi|388503566|gb|AFK39849.1| (unknown [Lotus japonicus])

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-50
Identity = 106/130 (81.54%), Postives = 120/130 (92.31%), Query Frame = 1 

Query: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MATT+MT++PQF+GLRP  S  PV++LV VQP+RR+G GAL ARC D+IGSPTNLIMV S
Sbjct: 1   MATTVMTTLPQFSGLRPKFSATPVQNLVTVQPMRRKGNGALGARC-DFIGSPTNLIMVAS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           T+LMLFAGRFGLAPSANRK+TAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHIIGVGV
Sbjct: 61  TTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IGSL
Sbjct: 121 VLGLKNIGSL 129

The following BLAST results are available for this feature:
BLAST of CmaCh03G014360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSAK_ARATH8.5e-5077.86Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thalian... [more]
PSAK_MEDSA3.0e-4775.78Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa GN=... [more]
PSAK_HORVU2.3e-3972.00Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare GN=... [more]
PSAK_CHLRE5.3e-2050.00Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinh... [more]
PSAK_CUCSA8.6e-1096.88Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis ... [more]
BLAST of CmaCh03G014360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM49_CUCSA1.4e-5692.97Uncharacterized protein OS=Cucumis sativus GN=Csa_6G525340 PE=4 SV=1[more]
A0A061DVW2_THECC1.1e-5183.08Photosystem I subunit K OS=Theobroma cacao GN=TCM_006076 PE=4 SV=1[more]
I3SM84_LOTJA9.1e-5181.54Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A0A151SSA9_CAJCA1.2e-5082.31Uncharacterized protein OS=Cajanus cajan GN=KK1_003994 PE=4 SV=1[more]
K7MCH3_SOYBN2.0e-5082.31Uncharacterized protein OS=Glycine max GN=GLYMA_15G194300 PE=4 SV=1[more]
BLAST of CmaCh03G014360 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30380.14.8e-5177.86 photosystem I subunit K[more]
BLAST of CmaCh03G014360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078148|ref|XP_008439573.1|2.0e-5994.62PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis me... [more]
gi|449433712|ref|XP_004134641.1|2.1e-5692.97PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis sa... [more]
gi|590681566|ref|XP_007041118.1|1.5e-5183.08Photosystem I subunit K [Theobroma cacao][more]
gi|1009105558|ref|XP_015879055.1|3.4e-5180.77PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Ziziphus j... [more]
gi|388503566|gb|AFK39849.1|1.3e-5081.54unknown [Lotus japonicus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000549PSI_PsaG/PsaK
IPR016370PSI_PsaG/PsaK_pln
IPR017493PSAK
IPR023618PSI_PsaG/PsaK_dom
Vocabulary: Cellular Component
TermDefinition
GO:0009522photosystem I
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
Vocabulary: Molecular Function
TermDefinition
GO:0016168chlorophyll binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G014360.1CmaCh03G014360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000549Photosystem I PsaG/PsaK proteinPFAMPF01241PSI_PSAKcoord: 53..128
score: 1.4
IPR000549Photosystem I PsaG/PsaK proteinPROSITEPS01026PHOTOSYSTEM_I_PSAGKcoord: 100..117
scor
IPR000549Photosystem I PsaG/PsaK proteinunknownSSF81563Photosystem I reaction center subunit X, PsaKcoord: 99..124
score: 1.
IPR016370Photosystem I PsaG/PsaK, plantPIRPIRSF002912PsaKcoord: 1..130
score: 3.1
IPR017493Photosystem I PsaK, reaction centre, plantTIGRFAMsTIGR03050TIGR03050coord: 48..130
score: 5.5
IPR023618Photosystem I PsaG/PsaK domainGENE3DG3DSA:1.10.286.40coord: 48..128
score: 6.5
NoneNo IPR availablePANTHERPTHR34195FAMILY NOT NAMEDcoord: 1..130
score: 2.5
NoneNo IPR availablePANTHERPTHR34195:SF2PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTICcoord: 1..130
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G014360Cucsa.048130Cucumber (Gy14) v1cgycmaB0045
CmaCh03G014360Cla009814Watermelon (97103) v1cmawmB628
CmaCh03G014360Csa6G525340Cucumber (Chinese Long) v2cmacuB678
CmaCh03G014360MELO3C007091Melon (DHL92) v3.5.1cmameB618
CmaCh03G014360ClCG01G025030Watermelon (Charleston Gray)cmawcgB576
CmaCh03G014360CSPI06G36720Wild cucumber (PI 183967)cmacpiB686
CmaCh03G014360CmoCh03G014320Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G014360Lsi01G001030Bottle gourd (USVL1VR-Ls)cmalsiB602
CmaCh03G014360Cp4.1LG10g06250Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G014360MELO3C007091.2Melon (DHL92) v3.6.1cmamedB704
CmaCh03G014360CsaV3_6G052210Cucumber (Chinese Long) v3cmacucB0807
CmaCh03G014360Cla97C01G025040Watermelon (97103) v2cmawmbB667
CmaCh03G014360Bhi03G000125Wax gourdcmawgoB0789
CmaCh03G014360CsGy6G036100Cucumber (Gy14) v2cgybcmaB830
CmaCh03G014360Carg14979Silver-seed gourdcarcmaB1023
CmaCh03G014360Carg19302Silver-seed gourdcarcmaB0413
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G014360Silver-seed gourdcarcmaB0587
CmaCh03G014360Watermelon (97103) v2cmawmbB682
CmaCh03G014360Cucurbita maxima (Rimu)cmacmaB232
CmaCh03G014360Cucurbita maxima (Rimu)cmacmaB397
CmaCh03G014360Cucurbita maxima (Rimu)cmacmaB528
CmaCh03G014360Cucurbita moschata (Rifu)cmacmoB638
CmaCh03G014360Cucurbita moschata (Rifu)cmacmoB644
CmaCh03G014360Cucurbita moschata (Rifu)cmacmoB672
CmaCh03G014360Watermelon (Charleston Gray)cmawcgB583
CmaCh03G014360Watermelon (97103) v1cmawmB622
CmaCh03G014360Cucurbita pepo (Zucchini)cmacpeB653
CmaCh03G014360Cucurbita pepo (Zucchini)cmacpeB667
CmaCh03G014360Cucurbita pepo (Zucchini)cmacpeB675
CmaCh03G014360Bottle gourd (USVL1VR-Ls)cmalsiB606