Cla97C01G025040 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G025040
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	photosystem I reaction center subunit psaK, chloroplastic
Location	Cla97Chr01 : 35992153 .. 35993807 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTACCATGATGACTTCGATCCCTCAGTTTAATGGGCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGCCTGGTAAGTCGCCGTCTCCGCCGTAGCCGTTGCCGTCGCTGTCGGCTTTGAATGATAGGAAAGAGGCTGACATTTGATTTTGCAGGTGGCGGTGCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACTTGGTAACTATCAATTTTCACTAATTTTTTAATTTCGAAATTATTTTTTATGTTTTTGTTAATAGTTATTTTGTCTTTTTTCTTTTTGCAAAGGTTTTATTTTTGTCTTCTAAATTTTAAAGATTTATATAATCCCTCGAATTTTGATATCATGAATATCGATGGTAGAAATTGAGGATGAAATATAGGAGTGCAGTGATAGAAAAATAGAAACGAAAGTTAGAGCACCGATTAATAACATGTAGAAGTATGTTATCACCTTATTTTTCAAAAATAAAAATCAAATCATTATCACATGGAATTTACATGTTTGATATAAATTTTAAATTCAAGGTAACTTCTATATTCAAGTTTATAAATGACGAATAGTAATAAAACAAATCATGTTTTGGGTCTATGGAGGAAAGTATAATTCCTTATTTTCACAAACAAAGTTTAACTTTAGAGAATCGTCATGGAATATTGTTCTTACAAACCATTGTTGCAAACTTGAAGAATCAAAATGGGGTTTGAAATATTTGCTTGGAAAAAAAATTAATCTTTACCTTCAAACTCAAACTAAGTTGGGCCCAATTTTAACTCTAAATGTTGATGAATTAAATGTTAATTTTCATTAAATTGCACCTCAAATTTATATATAATTGTATTCTTAACATTAAATTTTAAAAAGTGTTCCAGCGTTAATCCTATAGCAAGTTATTGTTCCAAATATGGTTAAATTAAATGTGTTATTGTGTGTATGATAAGTTTTTGCTCCAAATAGGGATAAATGTGTCTTTTATGTGTGCAATAAATGATAAAACATATGTGCAATAAGAAGTTGATACTTTTTCTAGAAAAATTTGTATTAGAGCTAAATATTTTAGTTCAAATTATTGATTTTGGACTAATTTATCAGTCAAAAGTTTTTTTTTTTTTGGTGGAAAACTTTATTTGATTAAATTAATGAGTTTATGAAGATTTTTGGACTGTTTCTATTAAAATTAATGAATGAGTTAGCGAAATGGAATTGAAGGTGAATATTGCATAAGTTAAATTCAAGGCAAAATTTGATGGAACTGAAAATAAATTTTTTTTTTTTCTCTCCTATGTGTTATTTTCCTGAAAGTAATAAAATTACCCTGAAAATCAAGCGACATAAAATAACAGACGAATGATATGCGTACACGTAACAATGAAACAGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCCGCAAACAGAAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTTGCTGATACTTTGGCATGTGGCAGTGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGAGCATTGGTTCACTGTAA

mRNA sequence

ATGGCAGCTACCATGATGACTTCGATCCCTCAGTTTAATGGGCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACTTGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCCGCAAACAGAAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTTGCTGATACTTTGGCATGTGGCAGTGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGAGCATTGGTTCACTGTAA

Coding sequence (CDS)

ATGGCAGCTACCATGATGACTTCGATCCCTCAGTTTAATGGGCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCGCTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCCACCAACTTGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCCGCAAACAGAAAATCAACGGCGGGGCTGAAGCTGGAGGCGAGGGACTCCGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTTGCTGATACTTTGGCATGTGGCAGTGTCGGCCACATCATTGGCGTCGGTGTCGTTCTTGGCCTTAAGAGCATTGGTTCACTGTAA

Protein sequence

MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL

Homology

[Close]

BLAST of Cla97C01G025040 vs. NCBI nr
Match: XP_023543618.1 (photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 8.4e-62
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS
Sbjct: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLKSIGSL
Sbjct: 121 VLGLKSIGSL 130

[Close]

BLAST of Cla97C01G025040 vs. NCBI nr
Match: XP_022977533.1 (photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 2.4e-61
Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS
Sbjct: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRKSTAGLKLEAR+SGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARESGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLKSIGSL
Sbjct: 121 VLGLKSIGSL 130

[Close]

BLAST of Cla97C01G025040 vs. NCBI nr
Match: XP_008439573.1 (PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 3.2e-61
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MAATMMT +PQFNGLRPT SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS
Sbjct: 1   MAATMMTFVPQFNGLRPTASVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK IGSL
Sbjct: 121 VLGLKGIGSL 130

[Close]

BLAST of Cla97C01G025040 vs. NCBI nr
Match: XP_022146631.1 (photosystem I reaction center subunit psaK, chloroplastic [Momordica charantia])

HSP 1 Score: 243.4 bits (620), Expect = 4.2e-61
Identity = 126/130 (96.92%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA TMMTSIPQF+GL+PTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS
Sbjct: 1   MATTMMTSIPQFSGLKPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLKSIGSL
Sbjct: 121 VLGLKSIGSL 130

[Close]

BLAST of Cla97C01G025040 vs. NCBI nr
Match: XP_022926025.1 (photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 4.2e-61
Identity = 127/130 (97.69%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA TMMTSIPQF GLRPTVSVAPVRSLVAVQPLRRRGG ALSARCGDYIGSPTNLIMVIS
Sbjct: 1   MATTMMTSIPQFTGLRPTVSVAPVRSLVAVQPLRRRGGSALSARCGDYIGSPTNLIMVIS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLKSIGSL
Sbjct: 121 VLGLKSIGSL 130

[Close]

BLAST of Cla97C01G025040 vs. TrEMBL
Match: tr|A0A1S3AZR1|A0A1S3AZR1_CUCME (photosystem I reaction center subunit psaK, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484327 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MAATMMT +PQFNGLRPT SVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS
Sbjct: 1   MAATMMTFVPQFNGLRPTASVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK IGSL
Sbjct: 121 VLGLKGIGSL 130

[Close]

BLAST of Cla97C01G025040 vs. TrEMBL
Match: tr|A0A0A0KM49|A0A0A0KM49_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525340 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.4e-57
Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 4   TMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 63
           TMMT +PQFNGLRPT SV PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL
Sbjct: 6   TMMTFVPQFNGLRPTTSV-PVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSL 65

Query: 64  MLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLG 123
           MLFAGRFGLAPSANRKSTAGLKLE RDSGLQTGDPAGFTLADTLACG+VGHIIGVGVVLG
Sbjct: 66  MLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLG 125

Query: 124 LKSIGSL 131
           LK IGSL
Sbjct: 126 LKGIGSL 131

[Close]

BLAST of Cla97C01G025040 vs. TrEMBL
Match: tr|A0A061DVW2|A0A061DVW2_THECC (Photosystem I subunit K OS=Theobroma cacao OX=3641 GN=TCM_006076 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 8.1e-53
Identity = 110/130 (84.62%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MAAT MT++PQF+GLRP +S APVR L AVQP+RR+G GAL ARCG YIGSPTNLIMV +
Sbjct: 1   MAATAMTTLPQFSGLRPRISAAPVRGLAAVQPMRRKGKGALGARCG-YIGSPTNLIMVTT 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRK+TAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVG+
Sbjct: 61  TSLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGI 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 129

[Close]

BLAST of Cla97C01G025040 vs. TrEMBL
Match: tr|A0A2P5G2A9|A0A2P5G2A9_9ROSA (Photosystem I PsaK, reaction centre OS=Trema orientalis OX=63057 GN=TorRG33x02_004510 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.3e-52
Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA T+ TS+PQFNGLRP  S  PVR+L  VQP+RR+G GAL ARCGD+IGSPTNLIMV S
Sbjct: 1   MATTVATSLPQFNGLRPQFSATPVRTLAVVQPMRRKGNGALGARCGDFIGSPTNLIMVTS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           T+LMLFAGRFGLAPSANRK+TAGLKLE RDSGLQTGDPAGFTLADTLACG VGHIIGVGV
Sbjct: 61  TTLMLFAGRFGLAPSANRKATAGLKLEIRDSGLQTGDPAGFTLADTLACGVVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 130

[Close]

BLAST of Cla97C01G025040 vs. TrEMBL
Match: tr|A0A2I4HD02|A0A2I4HD02_9ROSI (photosystem I reaction center subunit psaK, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109016022 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.2e-52
Identity = 109/130 (83.85%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVIS 60
           MA T+MTS+PQ++GLRP +S APVR+L AVQP+ R+G GAL ARC DYIGSPTNLIMV S
Sbjct: 1   MATTVMTSLPQYSGLRPQISAAPVRTLAAVQPMGRKGKGALGARC-DYIGSPTNLIMVAS 60

Query: 61  TSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120
           TSLMLFAGRFGLAPSANRK+TAGLKLE RDSGLQTGDPAGFTLADTLACGSVGHIIGVGV
Sbjct: 61  TSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGV 120

Query: 121 VLGLKSIGSL 131
           VLGLK+IG+L
Sbjct: 121 VLGLKNIGAL 129

[Close]

BLAST of Cla97C01G025040 vs. Swiss-Prot
Match: sp|Q9SUI5|PSAK_ARATH (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAK PE=2 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 2.0e-51
Identity = 104/131 (79.39%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60
           MA+TMMT++PQFNGLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV 
Sbjct: 1   MASTMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKC-DFIGSSTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGL+LEARDSGLQTGDPAGFTLADTLACG+VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKSIGSL 131
           VVLGLK+IG++
Sbjct: 121 VVLGLKNIGAI 130

[Close]

BLAST of Cla97C01G025040 vs. Swiss-Prot
Match: sp|Q9ZT05|PSAK_MEDSA (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=3879 GN=PSAK PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 6.8e-47
Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPL-RRRGGGALSARCGDYIGSPTNLIMVI 60
           MA +MMT++PQF GLRP +  +P++ LVA QP+ RR+G GAL  RC D+IGS TN+IMV 
Sbjct: 1   MATSMMTTLPQFTGLRPQLKPSPIQGLVAAQPMTRRKGKGALGVRC-DFIGSSTNVIMVA 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGLKLE RDSGLQTGDPAGFTLADTLACG+VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKSI 128
           VVLGL+++
Sbjct: 121 VVLGLRTL 127

[Close]

BLAST of Cla97C01G025040 vs. Swiss-Prot
Match: sp|P36886|PSAK_HORVU (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAK PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-39
Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 6   MTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLML 65
           MTS+PQF+GLR   + +  RS+  +  LRRR    +  RC DYIGS TNLIMV +T+LML
Sbjct: 8   MTSVPQFHGLR---TYSSPRSMATLPSLRRRRSQGI--RC-DYIGSSTNLIMVTTTTLML 67

Query: 66  FAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLK 125
           FAGRFGLAPSANRK+TAGLKLEAR+SGLQTGDPAGFTLADTLACG+VGHI+GVG+VLGLK
Sbjct: 68  FAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVGIVLGLK 126

Query: 126 SIGSL 131
           + G L
Sbjct: 128 NTGVL 126

[Close]

BLAST of Cla97C01G025040 vs. Swiss-Prot
Match: sp|P14225|PSAK_CHLRE (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAK PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-20
Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 29  AVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKL-- 88
           A++P +     ++  R   +IGS TNLIMV ST+  L A RFGLAP+  + +TAGLKL  
Sbjct: 10  AIRPTKAARRSSVVVRADGFIGSSTNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVD 69

Query: 89  EARDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL 131
               +G+ + DPAGFT+ D LA G+ GH +GVG+VLGLK IG+L
Sbjct: 70  SKNSAGVISNDPAGFTIVDVLAMGAAGHGLGVGIVLGLKGIGAL 113

[Close]

BLAST of Cla97C01G025040 vs. Swiss-Prot
Match: sp|P42051|PSAK_CUCSA (Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 GN=PSAK PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.7e-10
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0


Query: 47 DYIGSPTNLIMVISTSLMLFAGRFGLAPSANR 79
          DYIGSPTN+IMVISTSLMLFAGRFGLAPSANR
Sbjct: 2  DYIGSPTNVIMVISTSLMLFAGRFGLAPSANR 33

[Close]

BLAST of Cla97C01G025040 vs. TAIR10
Match: AT1G30380.1 (photosystem I subunit K)

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-52
Identity = 104/131 (79.39%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MAATMMTSIPQFNGLRPT-VSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVI 60
           MA+TMMT++PQFNGLR T +S APV+ L +VQP+RR+G GAL A+C D+IGS TNLIMV 
Sbjct: 1   MASTMMTTLPQFNGLRATKISAAPVQGLASVQPMRRKGNGALGAKC-DFIGSSTNLIMVT 60

Query: 61  STSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGSVGHIIGVG 120
           ST+LMLFAGRFGLAPSANRK+TAGL+LEARDSGLQTGDPAGFTLADTLACG+VGHIIGVG
Sbjct: 61  STTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVG 120

Query: 121 VVLGLKSIGSL 131
           VVLGLK+IG++
Sbjct: 121 VVLGLKNIGAI 130

The following BLAST results are available for this feature:

BLAST of Cla97C01G025040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543618.1	8.4e-62	98.46	photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp....	[more]
XP_022977533.1	2.4e-61	97.69	photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita maxima...	[more]
XP_008439573.1	3.2e-61	96.92	PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis me...	[more]
XP_022146631.1	4.2e-61	96.92	photosystem I reaction center subunit psaK, chloroplastic [Momordica charantia]	[more]
XP_022926025.1	4.2e-61	97.69	photosystem I reaction center subunit psaK, chloroplastic-like [Cucurbita moscha...	[more]

BLAST of Cla97C01G025040 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZR1\|A0A1S3AZR1_CUCME	2.1e-61	96.92	photosystem I reaction center subunit psaK, chloroplastic OS=Cucumis melo OX=365...	[more]
tr\|A0A0A0KM49\|A0A0A0KM49_CUCSA	2.4e-57	94.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525340 PE=4 SV=1	[more]
tr\|A0A061DVW2\|A0A061DVW2_THECC	8.1e-53	84.62	Photosystem I subunit K OS=Theobroma cacao OX=3641 GN=TCM_006076 PE=4 SV=1	[more]
tr\|A0A2P5G2A9\|A0A2P5G2A9_9ROSA	2.3e-52	82.31	Photosystem I PsaK, reaction centre OS=Trema orientalis OX=63057 GN=TorRG33x02_0...	[more]
tr\|A0A2I4HD02\|A0A2I4HD02_9ROSI	5.2e-52	83.85	photosystem I reaction center subunit psaK, chloroplastic-like OS=Juglans regia ...	[more]

BLAST of Cla97C01G025040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUI5\|PSAK_ARATH	2.0e-51	79.39	Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thalian...	[more]
sp\|Q9ZT05\|PSAK_MEDSA	6.8e-47	75.00	Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=...	[more]
sp\|P36886\|PSAK_HORVU	1.1e-39	71.20	Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=...	[more]
sp\|P14225\|PSAK_CHLRE	5.4e-20	50.00	Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinh...	[more]
sp\|P42051\|PSAK_CUCSA	6.7e-10	96.88	Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis ...	[more]

BLAST of Cla97C01G025040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30380.1	1.1e-52	79.39	photosystem I subunit K	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **Cellular Component**
Term	Definition
GO:0009522	photosystem I
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR035982	PSI_centre_PsaK_sf
IPR023618	PSI_PsaG/PsaK_dom
IPR000549	PSI_PsaG/PsaK
IPR016370	PSI_PsaG/PsaK_pln
IPR017493	PSAK

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0070838	divalent metal ion transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G025040.1	Cla97C01G025040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017493	Photosystem I reaction centre subunit psaK, chloroplastic	TIGRFAM	TIGR03050	TIGR03050	coord: 48..130 e-value: 5.9E-47 score: 155.9
IPR016370	Photosystem I PsaG/PsaK, plant	PIRSF	PIRSF002912	PsaK	coord: 1..130 e-value: 1.1E-41 score: 140.1
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 53..128 e-value: 2.2E-25 score: 88.6
IPR000549	Photosystem I PsaG/PsaK protein	PROSITE	PS01026	PHOTOSYSTEM_I_PSAGK	coord: 100..117
IPR023618	Photosystem I PsaG/PsaK domain, chloroplastic	GENE3D	G3DSA:1.10.286.40		coord: 47..130 e-value: 6.4E-44 score: 150.0
None	No IPR available	PANTHER	PTHR34195:SF2	PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC	coord: 1..130
None	No IPR available	PANTHER	PTHR34195	FAMILY NOT NAMED	coord: 1..130
IPR035982	Photosystem I reaction centre subunit PsaK superfamily	SUPERFAMILY	SSF81563	Photosystem I reaction center subunit X, PsaK	coord: 99..124

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G025040	Cla009814	Watermelon (97103) v1	wmwmbB234
Cla97C01G025040	Csa6G525340	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G025040	MELO3C007091	Melon (DHL92) v3.5.1	mewmbB515
Cla97C01G025040	ClCG01G025030	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G025040	CSPI06G36720	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G025040	Cucsa.048130	Cucumber (Gy14) v1	cgywmbB017
Cla97C01G025040	CmaCh03G014360	Cucurbita maxima (Rimu)	cmawmbB667
Cla97C01G025040	Lsi01G001030	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G025040	CsGy6G036100	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G025040	MELO3C007091.2	Melon (DHL92) v3.6.1	medwmbB507
Cla97C01G025040	Carg19302	Silver-seed gourd	carwmbB0307
Cla97C01G025040	Carg14979	Silver-seed gourd	carwmbB0764
Cla97C01G025040	CsaV3_6G052210	Cucumber (Chinese Long) v3	cucwmbB430
Cla97C01G025040	Bhi03G000125	Wax gourd	wgowmbB396

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G025040	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G025040	Cucurbita moschata (Rifu)	cmowmbB639
Cla97C01G025040	Cucurbita moschata (Rifu)	cmowmbB849