CmaCh03G008220 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G008220
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRing finger protein, putative
LocationCma_Chr03 : 6253749 .. 6254894 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTGCCACCGGGCTTGTCTTGGGTCCCGATATCATTTTAAATTTTGCTATACACTCTGTACTCCTAACTGTTCCCTTCTATGTTCTCCAAAGTCACTTCCGCCGCATCTGCCTTTGCTCCCGTCTTCCGGTAACCCACCCCGCCCCCATCCCTCGGGAAAGACTCTACTTCTTCTCAGTTTGATCTCCACAGCTACTTTCATCGTCGCCATCTTCATGGTTTGTCTTCTTGTCAAGAAATTGAAGGAGTATCGTAACTCCAGACAGAATGGGCCGCCTCTGTTCGATGTCCACAGAGAGAACCTCCCCGATGAAGATGAAGAAGCACCCGTCCTTGACCACCACGTATGGTACATCAATACCGTCGGTCTCCAGCAATCGATCATCGATTCAATCACCATGTTCAAGTACAGGAAGGACGAGAAATTAATCGAAGGATCAGACTGCTCGATCTGCCTCGGCGAGTTTCAAGACGACGAGAGCCTTCGACTGTTGCCTAAATGCAGCCACGCCTTCCATGTTCCCTGCATCGACACCTGGCTGAGATCGCACAAAAACTGCCCCCTTTGTCGTGCTCCAGTGCTGTCCAACTCCGCCGCCCCTAATTTAGTCCCCACCGAACCGATCAGAAACCAGCCGCCGGCGATCGAAGTTACCCAAATGGAAACAGAGGCCGTCGAGGAAGAAAACAGAGGAGATGCAAACAGTGGAGAAGGGGGTAGCAATAGTGGAGGGAATTCTGAAATTCCAATCAAAGGGCTGTCTCTGACTTTGAGTGATTTGACTGAGAATCAAATTCGCGAGGCTGTGGAAGACGAAGGACAAGCGATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCAATGGCGATTTATCAGGCGACGGCCAAAATACAAATTCCAGAAGAAGGTTCTTCTTCAAGTGGGGCGTTAGTGGAAGTGAAGAATTCAGTCTCTTCGAGGAATGTTCCCTTCCCAAAGCGGGGAGTCGGAAATCAGAGCTTGTATAATCTCGTGAAGAGCATTCCATTTGGGCGTTCTGTGCAAAAGGGGGGGATCTCGATGAAAATGTTAAGTTCGGGTAGAAGGAAGATACATTCGGCCAGGCATTACAGAAGCCAGAGCTCGGTCCTTCCGATGTGA

mRNA sequence

ATGCCCTGCCACCGGGCTTGTCTTGGGTCCCGATATCATTTTAAATTTTGCTATACACTCTGTACTCCTAACTGTTCCCTTCTATGTTCTCCAAAGTCACTTCCGCCGCATCTGCCTTTGCTCCCGTCTTCCGGTAACCCACCCCGCCCCCATCCCTCGGGAAAGACTCTACTTCTTCTCAGTTTGATCTCCACAGCTACTTTCATCGTCGCCATCTTCATGGTTTGTCTTCTTGTCAAGAAATTGAAGGAGTATCGTAACTCCAGACAGAATGGGCCGCCTCTGTTCGATGTCCACAGAGAGAACCTCCCCGATGAAGATGAAGAAGCACCCGTCCTTGACCACCACGTATGGTACATCAATACCGTCGGTCTCCAGCAATCGATCATCGATTCAATCACCATGTTCAAGTACAGGAAGGACGAGAAATTAATCGAAGGATCAGACTGCTCGATCTGCCTCGGCGAGTTTCAAGACGACGAGAGCCTTCGACTGTTGCCTAAATGCAGCCACGCCTTCCATGTTCCCTGCATCGACACCTGGCTGAGATCGCACAAAAACTGCCCCCTTTGTCGTGCTCCAGTGCTGTCCAACTCCGCCGCCCCTAATTTAGTCCCCACCGAACCGATCAGAAACCAGCCGCCGGCGATCGAAGTTACCCAAATGGAAACAGAGGCCGTCGAGGAAGAAAACAGAGGAGATGCAAACAGTGGAGAAGGGGGTAGCAATAGTGGAGGGAATTCTGAAATTCCAATCAAAGGGCTGTCTCTGACTTTGAGTGATTTGACTGAGAATCAAATTCGCGAGGCTGTGGAAGACGAAGGACAAGCGATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCAATGGCGATTTATCAGGCGACGGCCAAAATACAAATTCCAGAAGAAGGTTCTTCTTCAAGTGGGGCGTTAGTGGAAGTGAAGAATTCAGTCTCTTCGAGGAATGTTCCCTTCCCAAAGCGGGGAGTCGGAAATCAGAGCTTGTATAATCTCGTGAAGAGCATTCCATTTGGGCGTTCTGTGCAAAAGGGGGGGATCTCGATGAAAATGTTAAGTTCGGGTAGAAGGAAGATACATTCGGCCAGGCATTACAGAAGCCAGAGCTCGGTCCTTCCGATGTGA

Coding sequence (CDS)

ATGCCCTGCCACCGGGCTTGTCTTGGGTCCCGATATCATTTTAAATTTTGCTATACACTCTGTACTCCTAACTGTTCCCTTCTATGTTCTCCAAAGTCACTTCCGCCGCATCTGCCTTTGCTCCCGTCTTCCGGTAACCCACCCCGCCCCCATCCCTCGGGAAAGACTCTACTTCTTCTCAGTTTGATCTCCACAGCTACTTTCATCGTCGCCATCTTCATGGTTTGTCTTCTTGTCAAGAAATTGAAGGAGTATCGTAACTCCAGACAGAATGGGCCGCCTCTGTTCGATGTCCACAGAGAGAACCTCCCCGATGAAGATGAAGAAGCACCCGTCCTTGACCACCACGTATGGTACATCAATACCGTCGGTCTCCAGCAATCGATCATCGATTCAATCACCATGTTCAAGTACAGGAAGGACGAGAAATTAATCGAAGGATCAGACTGCTCGATCTGCCTCGGCGAGTTTCAAGACGACGAGAGCCTTCGACTGTTGCCTAAATGCAGCCACGCCTTCCATGTTCCCTGCATCGACACCTGGCTGAGATCGCACAAAAACTGCCCCCTTTGTCGTGCTCCAGTGCTGTCCAACTCCGCCGCCCCTAATTTAGTCCCCACCGAACCGATCAGAAACCAGCCGCCGGCGATCGAAGTTACCCAAATGGAAACAGAGGCCGTCGAGGAAGAAAACAGAGGAGATGCAAACAGTGGAGAAGGGGGTAGCAATAGTGGAGGGAATTCTGAAATTCCAATCAAAGGGCTGTCTCTGACTTTGAGTGATTTGACTGAGAATCAAATTCGCGAGGCTGTGGAAGACGAAGGACAAGCGATAAGAAGGTCGGTTTCTATGGATTCAGTTTCTGCAATGGCGATTTATCAGGCGACGGCCAAAATACAAATTCCAGAAGAAGGTTCTTCTTCAAGTGGGGCGTTAGTGGAAGTGAAGAATTCAGTCTCTTCGAGGAATGTTCCCTTCCCAAAGCGGGGAGTCGGAAATCAGAGCTTGTATAATCTCGTGAAGAGCATTCCATTTGGGCGTTCTGTGCAAAAGGGGGGGATCTCGATGAAAATGTTAAGTTCGGGTAGAAGGAAGATACATTCGGCCAGGCATTACAGAAGCCAGAGCTCGGTCCTTCCGATGTGA

Protein sequence

MPCHRACLGSRYHFKFCYTLCTPNCSLLCSPKSLPPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMETEAVEEENRGDANSGEGGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKMLSSGRRKIHSARHYRSQSSVLPM
Homology
[Close]
BLAST of CmaCh03G008220 vs. Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.5e-35
Identity = 78/159 (49.06%), Postives = 104/159 (65.41%), Query Frame = 1 

Query: 47  PPRPHPSGKTLLL-LSLISTATFIVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPD 106
           PP P P   +LLL  S+    + I+ +F+V  L   + + R          D +++   D
Sbjct: 30  PPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDED 89

Query: 107 EDEEAPVLD-HHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLR 166
           E EE    D HHVW I TVGL +S I+SIT+  ++K E +I+G++CS+CL EF++DESLR
Sbjct: 90  ETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLR 149

Query: 167 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPN 204
           LLPKCSHAFH+ CIDTWL SHKNCPLCRAPVL  +  P+
Sbjct: 150 LLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPH 188

[Close]
BLAST of CmaCh03G008220 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 6.1e-32
Identity = 99/261 (37.93%), Postives = 138/261 (52.87%), Query Frame = 1 

Query: 20  LCTPNCSLLCSPK----SLPPHLPLLPSSGNP-PRPHPSGKTLLL--------LSLISTA 79
           +C P C   C P+    ++ P LP   SS  P P P PS   + L        L  IS  
Sbjct: 27  VCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLDAISII 86

Query: 80  TFIVAIFMVCL----LVKKLKEYRNSRQNGPPLFDVHREN---LPDEDEEAPVLDHHVWY 139
           T   A+  + L    LV K      +R N       + +N   + +E ++   +DH +W 
Sbjct: 87  TITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHPIWL 146

Query: 140 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 199
           I T GLQQSII+SIT+  Y++ + LIE +DC +CL EF++DESLRLLPKC+HAFH+ CID
Sbjct: 147 IRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCID 206

Query: 200 TWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVT------QMETEAVEEENRG 254
           TWL SH NCPLCRA +   S       T P  + P  +EVT       +E + V+EE+ G
Sbjct: 207 TWLSSHTNCPLCRAGIAMISV------TTPRYSGP--VEVTPGGSGSHLENDGVDEEDHG 266

[Close]
BLAST of CmaCh03G008220 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 2.7e-27
Identity = 67/163 (41.10%), Postives = 94/163 (57.67%), Query Frame = 1 

Query: 124 GLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLR 183
           GL +S+I SIT++KYRK +  +E SDCS+CL EFQ++ESLRLLPKC+HAFHVPCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 184 SHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMETEAVEEENRGDANSGEGGSN 243
           SH NCPLCRA ++++S                A+E+  +  + +  EN          S 
Sbjct: 193 SHSNCPLCRAFIVTSS----------------AVEIVDLTNQQIVTEN---------NSI 252

Query: 244 SGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMDS 287
           S G+  + +  L     DL  ++ R    +EG   +     DS
Sbjct: 253 STGDDSVVVVNL-----DLENSRSRNETVNEGSTPKPPEMQDS 265

[Close]
BLAST of CmaCh03G008220 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.3e-26
Identity = 79/202 (39.11%), Postives = 114/202 (56.44%), Query Frame = 1 

Query: 121 NTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDT 180
           N  GL +S+I SIT++KY+  +  ++GSDCS+CL EF+++ESLRLLPKC+HAFH+PCIDT
Sbjct: 113 NGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDT 172

Query: 181 WLRSHKNCPLCRA---PVLSNSAAPNLVPTEPIRNQPPAIEVTQMETE-----AVEEENR 240
           WL+SH NCPLCRA    V + +A+     +  + NQ  +   T   +E     A  E   
Sbjct: 173 WLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQT 232

Query: 241 GDANS-------GEGGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMD 300
           GD +S         G  NS   SE+ +             + RE  +++   IRRSVS++
Sbjct: 233 GDFDSVVVIEDLEIGSRNSDARSELQL-----------PEERRETKDEDSLPIRRSVSLN 292

Query: 301 SVSAMAIYQATAKIQIPEEGSS 308
           S   ++I     +I+  EEG S
Sbjct: 293 SGVVVSIADVLREIE-DEEGES 302

[Close]
BLAST of CmaCh03G008220 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 6.1e-24
Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1 

Query: 115 HHVWYINTV-GLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAF 174
           H  W ++   GL +++I+ IT+ KYR+ +  +  +DCS+CLGEF D ESLRLLP+CSHAF
Sbjct: 121 HESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAF 180

Query: 175 HVPCIDTWLRSHKNCPLCRAPV 196
           H  CIDTWL+SH NCPLCRA +
Sbjct: 181 HQQCIDTWLKSHSNCPLCRANI 202

[Close]
BLAST of CmaCh03G008220 vs. TrEMBL
Match: A0A0A0KK07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499220 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 5.4e-152
Identity = 297/397 (74.81%), Postives = 319/397 (80.35%), Query Frame = 1 

Query: 1   MPCHRACLG-SRYHFKFCYTLCTPNCSLLCS--PKSL---------PPHLPL--LPSSGN 60
           MPC   C   +  HF+ C  LC+P CS +C   PK+          PP LPL  LPSS  
Sbjct: 1   MPCQSNCAPITPSHFQVCTLLCSPKCSSICFQLPKAPIVDLPRPPPPPPLPLPQLPSSIV 60

Query: 61  PPRPH-PSGKTLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSRQNG-PPLFDVHRENLP 120
           PP+ H P   TLLLLSLI+TAT + AIF++CLL KK +EYRNSR N  P LFDV  ENLP
Sbjct: 61  PPQNHTPERSTLLLLSLITTATLVAAIFLLCLLFKKFREYRNSRHNRLPVLFDVQAENLP 120

Query: 121 DEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLR 180
           D DEE PV+DHHVWYINTVGLQQS IDSITMFKYRKDEKLI+GSDCSICLGEFQDDESLR
Sbjct: 121 DNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKYRKDEKLIDGSDCSICLGEFQDDESLR 180

Query: 181 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMET 240
           LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+ A P+L P EPI NQP  IE  Q ET
Sbjct: 181 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDPATPSLAPIEPITNQPAPIENIQRET 240

Query: 241 EAVEEENRGDANSGEGGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSM 300
           EA+EEENR D NSGE GSNSG NS IPIK LS TLS+LTENQ REAVEDEGQ IRRSVSM
Sbjct: 241 EAIEEENREDENSGEVGSNSGENSVIPIKRLSRTLSNLTENQNREAVEDEGQGIRRSVSM 300

Query: 301 DSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIP 360
           DSVSAMAIYQATAKIQIPEEG SSSG L+EVKNSVSSRN+PFPK G+GNQSLYNLVK I 
Sbjct: 301 DSVSAMAIYQATAKIQIPEEGCSSSGTLMEVKNSVSSRNLPFPKGGIGNQSLYNLVKGIS 360

Query: 361 FGRSVQKGGISMKMLSSGRRKIHSARHYRSQSSVLPM 382
           FG S+QKGGISMK  SSGRRK+  ARHYRSQSSVLPM
Sbjct: 361 FGCSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPM 397

[Close]
BLAST of CmaCh03G008220 vs. TrEMBL
Match: M5VZ76_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005891mg PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.4e-61
Identity = 183/427 (42.86%), Postives = 231/427 (54.10%), Query Frame = 1 

Query: 3   CHRACLGSRYHFKFCYTLCTPNCS-------------LLCSPKSLPPHLPLLPSSGNPP- 62
           C +A +   + F  C+  C   C              LL  P +LPP  P  PS   PP 
Sbjct: 24  CKQAPIQGGFCFLSCFKRCRDVCKNLIVYGGSELRPPLLPDP-TLPPPPPSPPSPPLPPL 83

Query: 63  ---RPHPSGKTLLLLSLISTATFIVAIFMVCLLVKKLKEY---RNSRQNG----PPLFDV 122
              +P    K +L  S+  T   I    +V ++   ++ Y    NSR+      P LFD 
Sbjct: 84  IDYQPPSEQKHILETSMKITGCMIGVALLVAIVFSIVRFYWRRSNSRRRRSSSLPILFDT 143

Query: 123 HRENLPDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQ 182
            ++ L DED   PVLDH +WYI TVGL QS+IDSIT+ KY+KDE LIEG+DCS+CL EF+
Sbjct: 144 QQDFL-DEDH-GPVLDHPIWYIYTVGLPQSVIDSITVCKYKKDEGLIEGTDCSVCLSEFE 203

Query: 183 DDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIE 242
           +DESLRLL KCSHAFH+PCIDTWLRSHKNCPLCRAP++ + A       EPI     + E
Sbjct: 204 EDESLRLLAKCSHAFHIPCIDTWLRSHKNCPLCRAPIVCDIARDQESVPEPISRDSGSRE 263

Query: 243 VTQMETEAVEEENRGDANSGEGGSNSGGNSE-----IPIKGLSL---------------- 302
             ++E     E N G  + G G S  G   +     IP +G +                 
Sbjct: 264 SIEVENL---ENNGGVGSLGSGTSEVGITDDENVFAIPTEGRTAENSGKVLPSSTVAAGS 323

Query: 303 ----TLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALV 362
                LSDLT+N  R   E++ Q IRRSVSMDS SA  IY+  A + IPEEGSS+S  LV
Sbjct: 324 RDPRALSDLTDN--RRVTEEDIQPIRRSVSMDSSSASRIYRDVANV-IPEEGSSNS-QLV 383

Query: 363 EVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKMLSSGRRKIHSARHYR 381
            VKN  S       K G  + SL  L++S   G S+Q G ISMK   S  RK  S++H R
Sbjct: 384 HVKNPNSG---IVSKYGSSSSSLAKLMRSSSIGFSLQMGPISMKRPFSSGRKFFSSKHGR 437

[Close]
BLAST of CmaCh03G008220 vs. TrEMBL
Match: W9RTZ7_9ROSA (RING-H2 finger protein ATL54 OS=Morus notabilis GN=L484_019811 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.7e-57
Identity = 159/380 (41.84%), Postives = 212/380 (55.79%), Query Frame = 1 

Query: 44  SGN----PPRPHPSGKTLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSR-----QNGPP 103
           SGN    P  P P     +    + T   I  + +VC++   +K Y + R     +N P 
Sbjct: 15  SGNLCEVPDPPSPFLNHAVRKGFLITGCLISGVLLVCVVFMIMKRYFSRRNASTERNLPI 74

Query: 104 LFDVHRENLPDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICL 163
           LFD  +++  DED   P +DHH+WYINTVGL QS+IDSIT  +Y+KDE LIEG++CS+CL
Sbjct: 75  LFDT-QQDFVDEDH-GPTIDHHIWYINTVGLPQSVIDSITACEYKKDEGLIEGTECSVCL 134

Query: 164 GEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQP 223
            EF++ E++RLLPKCSHAFH+ CID WLRSHKNCPLCRAP++ + +A             
Sbjct: 135 SEFEEGENIRLLPKCSHAFHISCIDRWLRSHKNCPLCRAPIVRDISA----------ETA 194

Query: 224 PAIEVTQMETEAVEEENRGDANSGEGG------SNSGGNSEI------------------ 283
           P   V +  ++AV  E+R   NS   G       + GG SE+                  
Sbjct: 195 PQASVAEPRSDAVSSEDRMRENSENHGVVLSDQVDDGGTSEVRVRVDCGEIPIEFAINGG 254

Query: 284 -PIKGL---------SLTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQ 343
             IKGL         S  LSDL +   RE V ++ Q +RRSVSMD+ SA A+Y+A   + 
Sbjct: 255 DRIKGLCNSVVRSCDSRALSDLGDQ--REVVGEDFQPMRRSVSMDASSATAVYRAVTIVS 314

Query: 344 IPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKMLS 381
             ++GSS+S   V VK   SS      KR   N SLY L++S   GRS+QKG  SMK  S
Sbjct: 315 --DQGSSNSQLAVPVK---SSNLAIVSKRVTRNLSLYKLMRSSSSGRSLQKGPTSMKR-S 374

[Close]
BLAST of CmaCh03G008220 vs. TrEMBL
Match: V4SQZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025698mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 153/385 (39.74%), Postives = 211/385 (54.81%), Query Frame = 1 

Query: 35  PPHLPLLPSSGNPPRPHPSGKTLLLLSLISTATFIVAIFM---VCLLVKKLKEYRN-SRQ 94
           PP LPL P +G+        K L+ + +I  +  I    +   +C  V+  +  RN SR+
Sbjct: 53  PPPLPLAPPAGDGSH----AKQLVTMGMIVVSCIIAGTLLFGILCAAVRVCRSRRNNSRR 112

Query: 95  NGPPLFDVHRENLPDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDC 154
             PP+    +E+  DED   PVLDH +WYINT+GL QS+IDSI +FKY+KD  LIEG+DC
Sbjct: 113 TNPPIIFATQEDFFDEDH-GPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLIEGTDC 172

Query: 155 SICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPI 214
           S+CL EFQ+DESLRLLPKC+HAFH+ CIDTWLRSH NCPLCRAP+LS +       +EP 
Sbjct: 173 SVCLSEFQEDESLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAPILSGAFVAQASESEPN 232

Query: 215 RNQPPAIEVTQMETEAVEEENRGDANSGEGGSNSGG------------NSEIPIKGLSLT 274
            N   +    + E   V  EN    +SGEG  N GG            N  +P++     
Sbjct: 233 SNDSDS----RNEIMVVNSEN----SSGEGSDNVGGGTGEVRNGNDNNNGSLPVEDERTV 292

Query: 275 ---------------------LSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATA 334
                                LSDL E+  R  VE++ Q +RRSVS+D+ +A  IY A  
Sbjct: 293 DDSMKILPHLKTRNCDSGCRVLSDLAES--RRMVEEDTQPMRRSVSLDASAASMIYNAVT 352

Query: 335 K--IQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQ--SLYNLVKSIPFGRSVQKGG 379
           +  + +  +G+  +    ++  S SS++    KRG G+   S+  LVKS   G S+QKG 
Sbjct: 353 EGVVHVKHQGNMDA----QLGKSKSSKSKIVFKRGSGSSSPSICRLVKSSSIGSSLQKGP 412

[Close]
BLAST of CmaCh03G008220 vs. TrEMBL
Match: A0A061DHM5_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_001032 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55
Identity = 158/378 (41.80%), Postives = 215/378 (56.88%), Query Frame = 1 

Query: 26  SLLCSPKSLPPHLPLLPSSGNPPR--PHPSGKTLL-----LLSLISTATFIVAIFMVCLL 85
           +L  +P+ LPP  PL P S  PP+   +  G  ++     + S++STA  ++AIF  C L
Sbjct: 16  ALTLTPRPLPPKPPL-PCSPPPPQNSSYKQGNVMITGVIVIGSMLSTA-LLIAIF--CAL 75

Query: 86  VKKLKEYRNSRQNGPPLFDVHRENLPDEDE-EAPVLDHHVWYINTVGLQQSIIDSITMFK 145
           V+     RN  +   PLF   +E+  DED    P LD+ +WYINT+GLQQS+IDSIT+FK
Sbjct: 76  VRSYFIRRNRSRRSMPLFFGTQEDFLDEDRGPEPHLDNPIWYINTIGLQQSVIDSITVFK 135

Query: 146 YRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS 205
           Y+KDE LIEG++CS+CL EFQ+DESLRLLPKCSHAFH+PCIDTWLRSHKNCPLCRAPV+ 
Sbjct: 136 YKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFHLPCIDTWLRSHKNCPLCRAPVVC 195

Query: 206 NSAAPNLVPTEPIRNQPPAIEVTQME-TEAVEEENRGDANSGEGG---------SNSGGN 265
            S       +EP  +   +   T +E +E      R D   GE            N+  N
Sbjct: 196 ESIVAQATASEPNSSDSGSRNDTLVENSENYGGLGRNDVGEGETSEVRTCPIEDGNTCEN 255

Query: 266 SEIPIKGLSLTLSDLTENQIRE--AVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIPEEG 325
           S+  +      +SD     +     V+D+ Q  RRSVS+D  SA+ I+   A    P  G
Sbjct: 256 SKKSLVHSKTRISDSGSQILSNIAGVQDDVQPTRRSVSLDLSSALEIHSDVAG---PGNG 315

Query: 326 S-SSSGAL-VEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKMLSSGR 382
           +    G+L  E++     +     KRG  + S+  ++KS   GRS+ KG ISMK   S  
Sbjct: 316 AHKHHGSLDTELRQLKYPKGKIVGKRGSESSSICKMMKSCSIGRSLSKGQISMKRSFSSG 375

[Close]
BLAST of CmaCh03G008220 vs. TAIR10
Match: AT5G10380.1 (AT5G10380.1 RING/U-box superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-36
Identity = 78/159 (49.06%), Postives = 104/159 (65.41%), Query Frame = 1 

Query: 47  PPRPHPSGKTLLL-LSLISTATFIVAIFMVCLLVKKLKEYRNSRQNGPPLFDVHRENLPD 106
           PP P P   +LLL  S+    + I+ +F+V  L   + + R          D +++   D
Sbjct: 30  PPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDED 89

Query: 107 EDEEAPVLD-HHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLR 166
           E EE    D HHVW I TVGL +S I+SIT+  ++K E +I+G++CS+CL EF++DESLR
Sbjct: 90  ETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLR 149

Query: 167 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPN 204
           LLPKCSHAFH+ CIDTWL SHKNCPLCRAPVL  +  P+
Sbjct: 150 LLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPH 188

[Close]
BLAST of CmaCh03G008220 vs. TAIR10
Match: AT4G33565.1 (AT4G33565.1 RING/U-box superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-34
Identity = 101/324 (31.17%), Postives = 156/324 (48.15%), Query Frame = 1 

Query: 3   CHRACLGSRYHFKFCYTLCTPNCSLLCSPKSLPPHLPLLPSSGNPPRPHPSGKTLLLLSL 62
           C   C+       +C + C   C  +C          ++ S  +PP        L  + +
Sbjct: 75  CKNNCIQELKTLGYCSSYCLDECPSICEI--------VVISGLSPPAEIHHDDNLKRILI 134

Query: 63  ISTATFIVAIFMVCLLVKKLKEYRNSRQN--GPPLFDVHRENLPDEDEEAPVL-DHHVWY 122
           IS ++ I  +F++ LLV   K Y   R++      + +      D D  APV+ DH +W+
Sbjct: 135 ISASSIITTLFLLTLLVLCFKFYYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPIWH 194

Query: 123 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 182
           I T+GL  ++I SI + +Y K + ++EG+DCS+CL EF+++E+LRLLPKC HAFH+ CID
Sbjct: 195 IRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCID 254

Query: 183 TWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMETEAVEEENRGDANSGE 242
           TWLRSH NCPLCRAP++  +          I +    +E    E   +  E  GD    E
Sbjct: 255 TWLRSHTNCPLCRAPIVEANTM--------IDDHSEGLE----EISVMIPEENGDDTDEE 314

Query: 243 GGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATA-- 302
                 G                  N  R+  E + Q +RRSVS+DS+S + + +     
Sbjct: 315 IEEERDG---------------FVSNISRDHGESQQQRVRRSVSLDSLSGLRVSEVVVGR 363

Query: 303 -KIQIPEEGSSSSGALVEVKNSVS 321
            K ++    +  SG    +K S+S
Sbjct: 375 EKEKLKRGNNIGSGRSSLLKRSIS 363

[Close]
BLAST of CmaCh03G008220 vs. TAIR10
Match: AT1G72220.1 (AT1G72220.1 RING/U-box superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-33
Identity = 99/261 (37.93%), Postives = 138/261 (52.87%), Query Frame = 1 

Query: 20  LCTPNCSLLCSPK----SLPPHLPLLPSSGNP-PRPHPSGKTLLL--------LSLISTA 79
           +C P C   C P+    ++ P LP   SS  P P P PS   + L        L  IS  
Sbjct: 27  VCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLDAISII 86

Query: 80  TFIVAIFMVCL----LVKKLKEYRNSRQNGPPLFDVHREN---LPDEDEEAPVLDHHVWY 139
           T   A+  + L    LV K      +R N       + +N   + +E ++   +DH +W 
Sbjct: 87  TITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHPIWL 146

Query: 140 INTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCID 199
           I T GLQQSII+SIT+  Y++ + LIE +DC +CL EF++DESLRLLPKC+HAFH+ CID
Sbjct: 147 IRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCID 206

Query: 200 TWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVT------QMETEAVEEENRG 254
           TWL SH NCPLCRA +   S       T P  + P  +EVT       +E + V+EE+ G
Sbjct: 207 TWLSSHTNCPLCRAGIAMISV------TTPRYSGP--VEVTPGGSGSHLENDGVDEEDHG 266

[Close]
BLAST of CmaCh03G008220 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-28
Identity = 67/163 (41.10%), Postives = 94/163 (57.67%), Query Frame = 1 

Query: 124 GLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDTWLR 183
           GL +S+I SIT++KYRK +  +E SDCS+CL EFQ++ESLRLLPKC+HAFHVPCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 184 SHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMETEAVEEENRGDANSGEGGSN 243
           SH NCPLCRA ++++S                A+E+  +  + +  EN          S 
Sbjct: 193 SHSNCPLCRAFIVTSS----------------AVEIVDLTNQQIVTEN---------NSI 252

Query: 244 SGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMDS 287
           S G+  + +  L     DL  ++ R    +EG   +     DS
Sbjct: 253 STGDDSVVVVNL-----DLENSRSRNETVNEGSTPKPPEMQDS 265

[Close]
BLAST of CmaCh03G008220 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-27
Identity = 79/202 (39.11%), Postives = 114/202 (56.44%), Query Frame = 1 

Query: 121 NTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHVPCIDT 180
           N  GL +S+I SIT++KY+  +  ++GSDCS+CL EF+++ESLRLLPKC+HAFH+PCIDT
Sbjct: 113 NGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDT 172

Query: 181 WLRSHKNCPLCRA---PVLSNSAAPNLVPTEPIRNQPPAIEVTQMETE-----AVEEENR 240
           WL+SH NCPLCRA    V + +A+     +  + NQ  +   T   +E     A  E   
Sbjct: 173 WLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQT 232

Query: 241 GDANS-------GEGGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSMD 300
           GD +S         G  NS   SE+ +             + RE  +++   IRRSVS++
Sbjct: 233 GDFDSVVVIEDLEIGSRNSDARSELQL-----------PEERRETKDEDSLPIRRSVSLN 292

Query: 301 SVSAMAIYQATAKIQIPEEGSS 308
           S   ++I     +I+  EEG S
Sbjct: 293 SGVVVSIADVLREIE-DEEGES 302

[Close]
BLAST of CmaCh03G008220 vs. NCBI nr
Match: gi|449451613|ref|XP_004143556.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 7.7e-152
Identity = 297/397 (74.81%), Postives = 319/397 (80.35%), Query Frame = 1 

Query: 1   MPCHRACLG-SRYHFKFCYTLCTPNCSLLCS--PKSL---------PPHLPL--LPSSGN 60
           MPC   C   +  HF+ C  LC+P CS +C   PK+          PP LPL  LPSS  
Sbjct: 1   MPCQSNCAPITPSHFQVCTLLCSPKCSSICFQLPKAPIVDLPRPPPPPPLPLPQLPSSIV 60

Query: 61  PPRPH-PSGKTLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSRQNG-PPLFDVHRENLP 120
           PP+ H P   TLLLLSLI+TAT + AIF++CLL KK +EYRNSR N  P LFDV  ENLP
Sbjct: 61  PPQNHTPERSTLLLLSLITTATLVAAIFLLCLLFKKFREYRNSRHNRLPVLFDVQAENLP 120

Query: 121 DEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLR 180
           D DEE PV+DHHVWYINTVGLQQS IDSITMFKYRKDEKLI+GSDCSICLGEFQDDESLR
Sbjct: 121 DNDEEEPVIDHHVWYINTVGLQQSAIDSITMFKYRKDEKLIDGSDCSICLGEFQDDESLR 180

Query: 181 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQMET 240
           LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+ A P+L P EPI NQP  IE  Q ET
Sbjct: 181 LLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDPATPSLAPIEPITNQPAPIENIQRET 240

Query: 241 EAVEEENRGDANSGEGGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIRRSVSM 300
           EA+EEENR D NSGE GSNSG NS IPIK LS TLS+LTENQ REAVEDEGQ IRRSVSM
Sbjct: 241 EAIEEENREDENSGEVGSNSGENSVIPIKRLSRTLSNLTENQNREAVEDEGQGIRRSVSM 300

Query: 301 DSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNLVKSIP 360
           DSVSAMAIYQATAKIQIPEEG SSSG L+EVKNSVSSRN+PFPK G+GNQSLYNLVK I 
Sbjct: 301 DSVSAMAIYQATAKIQIPEEGCSSSGTLMEVKNSVSSRNLPFPKGGIGNQSLYNLVKGIS 360

Query: 361 FGRSVQKGGISMKMLSSGRRKIHSARHYRSQSSVLPM 382
           FG S+QKGGISMK  SSGRRK+  ARHYRSQSSVLPM
Sbjct: 361 FGCSMQKGGISMKRFSSGRRKLQWARHYRSQSSVLPM 397

[Close]
BLAST of CmaCh03G008220 vs. NCBI nr
Match: gi|659080025|ref|XP_008440570.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 5.4e-137
Identity = 279/402 (69.40%), Postives = 308/402 (76.62%), Query Frame = 1 

Query: 1   MPCHRACLGSR-YHFKFCYTLCTPNCSLLC--------------SPKSLPPH---LPLLP 60
           M C   C+ +   HF+ C +LC+P CS LC               P+  PP    LP LP
Sbjct: 1   MSCQSNCVPTTPSHFQVCTSLCSPKCSGLCFGLPKVPIVVLPRPQPRPPPPPPLPLPQLP 60

Query: 61  SSGNPPRPHPSGK-TLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSRQNG-PPLFDVHR 120
           SS  PP+ H  G+ TLLLLSLI+TAT + AIFM+CLL KK +EYRNSR N  P LFDV  
Sbjct: 61  SSIVPPQTHTPGRSTLLLLSLITTATLVAAIFMLCLLFKKFREYRNSRHNRLPVLFDVQG 120

Query: 121 ENLPDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDD 180
           ENLPD DEE PV+DHHVWYINTVGLQQS+IDSITMFKYRKDEKLI+GSDCSICLGEFQDD
Sbjct: 121 ENLPDSDEEEPVIDHHVWYINTVGLQQSVIDSITMFKYRKDEKLIDGSDCSICLGEFQDD 180

Query: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPI-RNQPPAIEV 240
           ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLS+S AP+L P EPI RNQP  IE 
Sbjct: 181 ESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSDSVAPSLAPIEPIRRNQPEPIEN 240

Query: 241 TQMETEAVEEENRGDANSGEGGSNSGGNSEIPIKGLSLTLSDLTENQIREAVEDEGQAIR 300
           TQMETE +EEEN  D NSGE G     NSEI IK LS TLS+L +N   EAVEDEGQ +R
Sbjct: 241 TQMETETIEEENGVDENSGEVGRE---NSEILIKRLSRTLSNLNQNS--EAVEDEGQGLR 300

Query: 301 RSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGNQSLYNL 360
           RSVSMDSVSAMAIYQ T KIQIPEEG SS+G L+EVK+SVSS+N       +GNQSLYNL
Sbjct: 301 RSVSMDSVSAMAIYQVTTKIQIPEEGCSSNGTLMEVKDSVSSKN-------LGNQSLYNL 360

Query: 361 VKSIPFGRSVQKGGISMKMLSSGRRKIHSARHYRSQSSVLPM 382
           VKSI FG S+QKGGIS+K  SSGRRK+  ARHYRSQSSVLPM
Sbjct: 361 VKSISFGHSMQKGGISIKRFSSGRRKLQWARHYRSQSSVLPM 390

[Close]
BLAST of CmaCh03G008220 vs. NCBI nr
Match: gi|1009146154|ref|XP_015890728.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 257.7 bits (657), Expect = 3.2e-65
Identity = 179/408 (43.87%), Postives = 235/408 (57.60%), Query Frame = 1 

Query: 18  YTLCTPNCSLLCSPKSLPPHLPLLPSSGNPPRPHP------------------SGKTLLL 77
           +T  T NC    +    PP  P  PSS  PP P P                  + K ++ 
Sbjct: 18  FTKRTQNCVCPNNWMDCPP--PSTPSSPRPP-PRPIYPDHNQDGGDGDYDNINTQKHIVQ 77

Query: 78  LSLISTATFIVAIFMVCLLVKKLKEY----RNSRQNGPPLFDVHRENLPDEDEEAPVLDH 137
            SL  T++ +V  F++CL+   LK+Y     NSR    P+    +++  DED   PV+DH
Sbjct: 78  TSLTVTSSMVVGAFVLCLIYMVLKKYLVRRNNSRTRNLPIIFHTQDDFLDEDH-GPVIDH 137

Query: 138 HVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDESLRLLPKCSHAFHV 197
            +W+INTVGL QSIIDSIT+FKY+ +E LIEG +CS+CL EF++DE+LRLLPKCSHAFH+
Sbjct: 138 PIWFINTVGLPQSIIDSITVFKYKTEEGLIEGKECSVCLSEFEEDENLRLLPKCSHAFHL 197

Query: 198 PCIDTWLRSHKNCPLCRAPVLSN---SAAPNLVPTEPIRNQPPAIEVTQME--------- 257
           PCIDTWLRSHKNCPLCRAP++S+   +AA   V +EP  N     + TQ+E         
Sbjct: 198 PCIDTWLRSHKNCPLCRAPIVSDIFAAAAQVSVSSEPRVNDSDHNQETQIENSDNNGGLA 257

Query: 258 -TEAVEEENRGDANSGEGGSNSGGNSEIPIKGLSLT---------LSDLTENQIREAVED 317
               + EE  G     +    +G NSE PIKGLS +         LSDL E +     E+
Sbjct: 258 SNNEIGEETSGVRGEEDNNGENGRNSENPIKGLSDSVVENNNSGILSDLDERRGEINEEE 317

Query: 318 EGQAIRRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKNSVSSRNVPFPKRGVGN 377
             Q +RRSVS+DS SA  I +  A   + ++G+S+S  LV+VK+  S       KR  GN
Sbjct: 318 MQQPVRRSVSVDS-SATMICRDVANF-VSDQGNSNSSQLVDVKSLNS-------KRSSGN 377

Query: 378 QSLYNLVKSIPFGRSVQKGGISMKMLSSG-RRKIHSARHYRSQSSVLP 381
            SLY LV S   GRS+QKG + MK  SS   RK +S+RH+RSQSS LP
Sbjct: 378 LSLYKLVNS-SIGRSLQKGSVPMKRSSSSCSRKFYSSRHFRSQSSTLP 411

[Close]
BLAST of CmaCh03G008220 vs. NCBI nr
Match: gi|694379225|ref|XP_009365814.1| (PREDICTED: RING-H2 finger protein ATL54-like [Pyrus x bretschneideri])

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 170/424 (40.09%), Postives = 237/424 (55.90%), Query Frame = 1 

Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLC---SPKSLPPHLPLLPSSGNPP--------- 60
           +PC+       Y F+ C+  C   C  L      +  PP +P  P    PP         
Sbjct: 22  IPCNPNLNKGGYCFQSCFKTCPDVCKNLIVYVGGELAPPIVPYPPLPPTPPLPPLNDYDY 81

Query: 61  RPHPSGKTLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSRQNG-------PPLFDVHRE 120
           +P    K L+  S+  TA  + A  ++ ++   ++ YR  R +        P LFD  ++
Sbjct: 82  QPESERKRLIETSMTITACMVGAALLLAIVFSLVRFYRRRRDDSTRRSGSFPILFDTQQD 141

Query: 121 NLPDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDE 180
            L DED   PVLDH +WYI+TVGL QS+IDSIT+ K+RKDE LIEG+DCS+CL EF++DE
Sbjct: 142 FL-DEDH-GPVLDHPIWYIHTVGLPQSVIDSITVCKFRKDEGLIEGTDCSVCLSEFEEDE 201

Query: 181 SLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQP---PAIE 240
           SLRLLPKCSHAFH+PCIDTWLRSHKNCPLCRAP++ ++A   +   E + +      +I+
Sbjct: 202 SLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPIVCDTATVQVSVPESVSSGSGLRDSIQ 261

Query: 241 VTQME-TEAVEEENRGDANSGEGGSNSGGNSEIPIKGLSL-------------------- 300
           V  +E  E V    RG ++ G G  + G   E  I+G S+                    
Sbjct: 262 VENLEGDEGVGSVGRGTSDVGVG--DDGNVCETRIEGRSMENSRKVLPNSIVPVRICDPR 321

Query: 301 TLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKN 360
             SDL++N  R   E++ Q +RRS SMDS+SA+ IY+  A + IP+EGSS+S + V+  N
Sbjct: 322 AFSDLSDN--RRVTEEDVQPMRRSGSMDSLSALRIYRDVANV-IPKEGSSNSQSHVKNMN 381

Query: 361 SVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKMLSSGRRKIHSARHYRSQSS 382
           S         K G  + SL  L++S   G S+Q G ISMK   +  RK+ S++H RS SS
Sbjct: 382 SGI-----VSKHGSSSSSLSKLMRSSSVGFSLQMGPISMKRPFASGRKLFSSKHGRSHSS 433

[Close]
BLAST of CmaCh03G008220 vs. NCBI nr
Match: gi|657990713|ref|XP_008387576.1| (PREDICTED: RING-H2 finger protein ATL54-like [Malus domestica])

HSP 1 Score: 246.5 bits (628), Expect = 7.4e-62
Identity = 171/424 (40.33%), Postives = 232/424 (54.72%), Query Frame = 1 

Query: 1   MPCHRACLGSRYHFKFCYTLCTPNCSLLCS------PKSLPPHLPLLPSSGNPP------ 60
           +PC+       Y F+ C+  C   C  L           + P+ P  PS   PP      
Sbjct: 22  IPCNPHLNKGGYCFQSCFKTCPDVCKKLIVYVGGELAPPIVPYPPPPPSPXLPPLAEYYY 81

Query: 61  RPHPSGKTLLLLSLISTATFIVAIFMVCLLVKKLKEYRNSRQNG-------PPLFDVHRE 120
           +P    K L+  S+  TA  I A  ++ ++   ++ YR  R +        P LFD  ++
Sbjct: 82  QPESERKRLIETSMTITACMIGAALLLAIVFSLVRFYRRRRDDSTRRSGSFPILFDTQQD 141

Query: 121 NLPDEDEEAPVLDHHVWYINTVGLQQSIIDSITMFKYRKDEKLIEGSDCSICLGEFQDDE 180
            L DED   PVLDH +WYI+TVGL QS IDSIT+ K+RKDE LIEG+DCS+CL EF++DE
Sbjct: 142 FL-DEDH-GPVLDHPIWYIHTVGLPQSAIDSITVCKFRKDEGLIEGTDCSVCLSEFEEDE 201

Query: 181 SLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPVLSNSAAPNLVPTEPIRNQPPAIEVTQ 240
           SLRLLPKCSHAFH+PCIDTWLRSHKNCPLCRAP++ ++A   +   E + +     +  Q
Sbjct: 202 SLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPIVCDTATVQVSVPESVSSGSGVRDSIQ 261

Query: 241 MET----EAVEEENRGDANSGEGGSNSGGNSEIPIKGLSL-------------------- 300
           +E     E V    RG +  G G  + G   E  I+G S                     
Sbjct: 262 VENLEGDEGVGSVGRGTSEVGVG--DDGNVCETRIEGRSTENSRKVLPNSIVPVGICDPR 321

Query: 301 TLSDLTENQIREAVEDEGQAIRRSVSMDSVSAMAIYQATAKIQIPEEGSSSSGALVEVKN 360
             SDL++N  R   E++ Q +RRS SMDS+SA+ IY+  A + IPEEGSS+S + V+  N
Sbjct: 322 AFSDLSDN--RRVTEEDVQPMRRSGSMDSLSALRIYRDVANV-IPEEGSSNSQSHVKNMN 381

Query: 361 SVSSRNVPFPKRGVGNQSLYNLVKSIPFGRSVQKGGISMKMLSSGRRKIHSARHYRSQSS 382
           S         K G  + SL  L++S   G S+Q G ISMK   +  RK+ S++H RS SS
Sbjct: 382 SGI-----VSKHGSSSSSLSKLMRSSSIGFSLQMGPISMKRPFASGRKLFSSKHGRSHSS 433

The following BLAST results are available for this feature:
BLAST of CmaCh03G008220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL55_ARATH3.5e-3549.06E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1[more]
ATL54_ARATH6.1e-3237.93RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2[more]
ATL51_ARATH2.7e-2741.10RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2[more]
ATL52_ARATH2.3e-2639.11RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1[more]
ATL41_ORYSJ6.1e-2457.32E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04... [more]
BLAST of CmaCh03G008220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK07_CUCSA5.4e-15274.81Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499220 PE=4 SV=1[more]
M5VZ76_PRUPE4.4e-6142.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005891mg PE=4 SV=1[more]
W9RTZ7_9ROSA1.7e-5741.84RING-H2 finger protein ATL54 OS=Morus notabilis GN=L484_019811 PE=4 SV=1[more]
V4SQZ5_9ROSI1.2e-5539.74Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025698mg PE=4 SV=1[more]
A0A061DHM5_THECC1.6e-5541.80RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_001032 PE=4 S... [more]
BLAST of CmaCh03G008220 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G10380.12.0e-3649.06 RING/U-box superfamily protein[more]
AT4G33565.11.1e-3431.17 RING/U-box superfamily protein[more]
AT1G72220.13.5e-3337.93 RING/U-box superfamily protein[more]
AT3G03550.11.5e-2841.10 RING/U-box superfamily protein[more]
AT5G17600.11.3e-2739.11 RING/U-box superfamily protein[more]
BLAST of CmaCh03G008220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451613|ref|XP_004143556.1|7.7e-15274.81PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|659080025|ref|XP_008440570.1|5.4e-13769.40PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo][more]
gi|1009146154|ref|XP_015890728.1|3.2e-6543.87PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba][more]
gi|694379225|ref|XP_009365814.1|2.0e-6240.09PREDICTED: RING-H2 finger protein ATL54-like [Pyrus x bretschneideri][more]
gi|657990713|ref|XP_008387576.1|7.4e-6240.33PREDICTED: RING-H2 finger protein ATL54-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G008220.1CmaCh03G008220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 149..192
score: 1.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 150..191
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 150..192
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 147..195
score: 7.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 10..218
score: 5.1
NoneNo IPR availablePANTHERPTHR14155:SF101SUBFAMILY NOT NAMEDcoord: 10..218
score: 5.1
NoneNo IPR availableSMARTSM01197FANCL_C_2coord: 146..199
score: 0.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 138..198
score: 1.93

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G008220Cucsa.104190Cucumber (Gy14) v1cgycmaB0231
CmaCh03G008220Cucsa.160240Cucumber (Gy14) v1cgycmaB0458
CmaCh03G008220Cla014126Watermelon (97103) v1cmawmB632
CmaCh03G008220Cla022118Watermelon (97103) v1cmawmB617
CmaCh03G008220Csa2G369190Cucumber (Chinese Long) v2cmacuB652
CmaCh03G008220Csa6G499220Cucumber (Chinese Long) v2cmacuB681
CmaCh03G008220MELO3C011051Melon (DHL92) v3.5.1cmameB597
CmaCh03G008220MELO3C007735Melon (DHL92) v3.5.1cmameB617
CmaCh03G008220ClCG01G018570Watermelon (Charleston Gray)cmawcgB579
CmaCh03G008220ClCG08G011350Watermelon (Charleston Gray)cmawcgB601
CmaCh03G008220CSPI02G21270Wild cucumber (PI 183967)cmacpiB660
CmaCh03G008220CSPI06G30000Wild cucumber (PI 183967)cmacpiB689
CmaCh03G008220CmoCh03G008680Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G008220CmoCh05G005420Cucurbita moschata (Rifu)cmacmoB661
CmaCh03G008220Lsi01G007930Bottle gourd (USVL1VR-Ls)cmalsiB597
CmaCh03G008220Lsi08G009890Bottle gourd (USVL1VR-Ls)cmalsiB620
CmaCh03G008220Cp4.1LG11g04460Cucurbita pepo (Zucchini)cmacpeB657
CmaCh03G008220MELO3C007735.2Melon (DHL92) v3.6.1cmamedB703
CmaCh03G008220CsaV3_6G045220Cucumber (Chinese Long) v3cmacucB0809
CmaCh03G008220CsaV3_2G029930Cucumber (Chinese Long) v3cmacucB0779
CmaCh03G008220Cla97C01G017940Watermelon (97103) v2cmawmbB670
CmaCh03G008220Cla97C08G154340Watermelon (97103) v2cmawmbB699
CmaCh03G008220Bhi03G000877Wax gourdcmawgoB0798
CmaCh03G008220Bhi04G000652Wax gourdcmawgoB0780
CmaCh03G008220CsGy6G029490Cucumber (Gy14) v2cgybcmaB831
CmaCh03G008220CsGy2G020970Cucumber (Gy14) v2cgybcmaB237
CmaCh03G008220Carg08206Silver-seed gourdcarcmaB0082
CmaCh03G008220Carg00713Silver-seed gourdcarcmaB0567
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G008220Cucurbita moschata (Rifu)cmacmoB667
CmaCh03G008220Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G008220Cucurbita pepo (Zucchini)cmacpeB671
CmaCh03G008220Cucurbita pepo (Zucchini)cmacpeB686
CmaCh03G008220Bottle gourd (USVL1VR-Ls)cmalsiB614
CmaCh03G008220Melon (DHL92) v3.6.1cmamedB681
CmaCh03G008220Melon (DHL92) v3.6.1cmamedB688
CmaCh03G008220Silver-seed gourdcarcmaB1055
CmaCh03G008220Silver-seed gourdcarcmaB1287
CmaCh03G008220Cucumber (Chinese Long) v3cmacucB0787
CmaCh03G008220Wax gourdcmawgoB0812
CmaCh03G008220Cucurbita maxima (Rimu)cmacmaB518
CmaCh03G008220Cucurbita maxima (Rimu)cmacmaB523
CmaCh03G008220Cucumber (Gy14) v1cgycmaB0872