CmaCh03G006890 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGAAAACCAGAAGAGTGCCCGGAAAGGCGAAGCTCAGAGGCGACGACATGAAGAACAGCAAGGCCCCACCGGCGATGACTCTGTTCGAGCGCCTCCGCGAGGCCGTTTTTCGATTCATAATGCTATGTGCTCTTTCAAAGGCTACAAATCATCATTCTGCTGGAGCCGTCTTCCAAGACGACGTCGTTAGACGGCGGCAGTCATATCAAAACGGTGACCACCACCACAGTGAAGCTGTCGCTGATTGCATTGAGTTCATCAAGAAGAAGGCGTATTCCGACGACGAGATAATTCTCGACCGCGGATCAGTGGACGCCGATGATGATATGGCTGCGTCGGTGCCGTTGCCGGTCAGGTAAAAGTTTTATTTGGGTAACTGGCGGCGGAGCAAGGGATTGCTTGCATTTCAATTTAGCAACTTCGTGTGTTTGAAGTTAATGTATCCGGTTTTACAGTTTGGTTTTTATAGTCTGATAGACGTGTAATATATACTTGGATAATAGAAGAATTTATAATTTGGTGTGTTAGAAATTTCTCGTGGGGATATTTTTTCAATAACTTTAATATTAATATAAAAAATAAAAATAAAAATAAAAAATAAAAAACTTGGGCCACACCATTAGAGAGGTTTTAATTTTTTCCCTATACTTTTGTCCAATTTTATGTCCCACTTAGTTTAATATAAATATAGTTTTAATATTAACTAATTTTGAGATTCTAAATAATATTTAAACCGAAAACTTTGTTGTAAATTTTTTTTAATGGTTAAAGACGGTGGTGTAATATTAAAATTTAAAATTTTAAGAATAGTGGAGATAGAATTTATTATATTATATTTGCTTGTCAAATATATCTATTTATTATGATGTTTAAACATTTTTTTAATAAACATTATATCAAAAATGAAAATTTTTAAATAAGTTTTGGATCCACAAATTCTTGTTGACCAATTCTGGATCCCAACAAAAATAAATGAGAAATGAAATAGGTAATGGAGAGGAGGACGAGGAAGATTTTCCTATATACATCTATGGTTTATTCAAATTTATAAATTTTAATTTTAAATTTAATAAAATTCATCCCATCTATAGAATCATGAAATTAAAAGTTTAATATTGTATGTCAAATATAAAATTAATTCAATTTTATGTCTAATAAATTAGTTTATTAAAAAATGTAAAACAAATGTAAAAACGAGTAAAAGCGAACCATATGTAGTGGAAGGATAGAAAGTAACAGGTGGAAGAAAAGGGAGGGGTTGTTGCAGAAAGAGCAGGGAGGAATATGGGCTGCAGAGAGTGTCGGCTGTGATCAAGAGCAGCAGGGAAGGGAAGGGAGAATTGATACTTTGAAAGTGTCCAAATTGGAAGTGAAAAGAAGCAAAAGGGCAGGCGTGGGTGGATGTCATTTGGGCCATGTTACTAGTAAAGAACATTACGTACTGGAAGCCTCAAAAAGCTTTGAAGATGTTCATGGATCCACAGCTAAATTTGAGTGTACATACCCACCAGCCATGAATAGAAGGTTAGCGTTGAGCTATTTAGACTGA ATGGCGGAGAAAACCAGAAGAGTGCCCGGAAAGGCGAAGCTCAGAGGCGACGACATGAAGAACAGCAAGGCCCCACCGGCGATGACTCTGTTCGAGCGCCTCCGCGAGGCCGTTTTTCGATTCATAATGCTATGTGCTCTTTCAAAGGCTACAAATCATCATTCTGCTGGAGCCGTCTTCCAAGACGACGTCGTTAGACGGCGGCAGTCATATCAAAACGGTGACCACCACCACAGTGAAGCTGTCGCTGATTGCATTGAGTTCATCAAGAAGAAGGCGTATTCCGACGACGAGATAATTCTCGACCGCGGATCAGTGGACGCCGATGATGATATGGCTGCGTCGGTGCCGTTGCCGGTCAGTGGAAGGATAGAAAGTAACAGGTGGAAGAAAAGGGAGGGGTTGTTGCAGAAAGAGCAGGGAGGAATATGGGCTGCAGAGAGTGTCGGCTGTGATCAAGAGCAGCAGGGAAGGGAAGGGAGAATTGATACTTTGAAAGTGTCCAAATTGGAAGTGAAAAGAAGCAAAAGGGCAGGCGTGGGTGGATGTCATTTGGGCCATGTTACTAGTAAAGAACATTACGTACTGGAAGCCTCAAAAAGCTTTGAAGATGTTCATGGATCCACAGCTAAATTTGAGTGTACATACCCACCAGCCATGAATAGAAGGTTAGCGTTGAGCTATTTAGACTGA ATGGCGGAGAAAACCAGAAGAGTGCCCGGAAAGGCGAAGCTCAGAGGCGACGACATGAAGAACAGCAAGGCCCCACCGGCGATGACTCTGTTCGAGCGCCTCCGCGAGGCCGTTTTTCGATTCATAATGCTATGTGCTCTTTCAAAGGCTACAAATCATCATTCTGCTGGAGCCGTCTTCCAAGACGACGTCGTTAGACGGCGGCAGTCATATCAAAACGGTGACCACCACCACAGTGAAGCTGTCGCTGATTGCATTGAGTTCATCAAGAAGAAGGCGTATTCCGACGACGAGATAATTCTCGACCGCGGATCAGTGGACGCCGATGATGATATGGCTGCGTCGGTGCCGTTGCCGGTCAGTGGAAGGATAGAAAGTAACAGGTGGAAGAAAAGGGAGGGGTTGTTGCAGAAAGAGCAGGGAGGAATATGGGCTGCAGAGAGTGTCGGCTGTGATCAAGAGCAGCAGGGAAGGGAAGGGAGAATTGATACTTTGAAAGTGTCCAAATTGGAAGTGAAAAGAAGCAAAAGGGCAGGCGTGGGTGGATGTCATTTGGGCCATGTTACTAGTAAAGAACATTACGTACTGGAAGCCTCAAAAAGCTTTGAAGATGTTCATGGATCCACAGCTAAATTTGAGTGTACATACCCACCAGCCATGAATAGAAGGTTAGCGTTGAGCTATTTAGACTGA MAEKTRRVPGKAKLRGDDMKNSKAPPAMTLFERLREAVFRFIMLCALSKATNHHSAGAVFQDDVVRRRQSYQNGDHHHSEAVADCIEFIKKKAYSDDEIILDRGSVDADDDMAASVPLPVSGRIESNRWKKREGLLQKEQGGIWAAESVGCDQEQQGREGRIDTLKVSKLEVKRSKRAGVGGCHLGHVTSKEHYVLEASKSFEDVHGSTAKFECTYPPAMNRRLALSYLD
BLAST of CmaCh03G006890 vs. TrEMBL
Match: A0A0A0KGN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505880 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40 Identity = 100/133 (75.19%), Postives = 105/133 (78.95%), Query Frame = 1
BLAST of CmaCh03G006890 vs. TrEMBL
Match: B9MXG5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11660g PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.4e-15 Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 1
BLAST of CmaCh03G006890 vs. TrEMBL
Match: A0A067D7T3_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g035989mg PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13 Identity = 53/101 (52.48%), Postives = 59/101 (58.42%), Query Frame = 1
BLAST of CmaCh03G006890 vs. TrEMBL
Match: A0A151TIL0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_013184 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 6.0e-13 Identity = 46/86 (53.49%), Postives = 55/86 (63.95%), Query Frame = 1
BLAST of CmaCh03G006890 vs. TrEMBL
Match: I1LI09_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G076300 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.3e-12 Identity = 47/84 (55.95%), Postives = 53/84 (63.10%), Query Frame = 1
BLAST of CmaCh03G006890 vs. NCBI nr
Match: gi|700193706|gb|KGN48910.1| (hypothetical protein Csa_6G505880 [Cucumis sativus]) HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40 Identity = 100/133 (75.19%), Postives = 105/133 (78.95%), Query Frame = 1
BLAST of CmaCh03G006890 vs. NCBI nr
Match: gi|566170839|ref|XP_006383111.1| (hypothetical protein POPTR_0005s11660g [Populus trichocarpa]) HSP 1 Score: 89.4 bits (220), Expect = 9.2e-15 Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 1
BLAST of CmaCh03G006890 vs. NCBI nr
Match: gi|641818045|gb|KDO39059.1| (hypothetical protein CISIN_1g035989mg, partial [Citrus sinensis]) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-13 Identity = 53/101 (52.48%), Postives = 59/101 (58.42%), Query Frame = 1
BLAST of CmaCh03G006890 vs. NCBI nr
Match: gi|1012355686|gb|KYP66873.1| (hypothetical protein KK1_013184 [Cajanus cajan]) HSP 1 Score: 82.8 bits (203), Expect = 8.6e-13 Identity = 46/86 (53.49%), Postives = 55/86 (63.95%), Query Frame = 1
BLAST of CmaCh03G006890 vs. NCBI nr
Match: gi|731386829|ref|XP_010649044.1| (PREDICTED: uncharacterized protein LOC104879129 [Vitis vinifera]) HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12 Identity = 52/100 (52.00%), Postives = 62/100 (62.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |