CmaCh03G006430 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G006430
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUPF0548 protein
LocationCma_Chr03 : 5484975 .. 5487714 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAATAGGGAATCTGAGGTTTGCTATTGCTCTTCTCACGTATATACTTACAGGCTATAGTAATGGAAATATGACCAGTTTCAATGTGAGCATCTTTTTTGGTCTCTCCTAAGATTAACATTTTAGCACCTTAATTATTTCATTTGCTACTTTCAACTTTTTGATTTTTAGTAATTTAGTCCCTAAATTTTATACATTTTTAATCATCTAGTCTCCATCAAACATGTTTATTGACGATAAAAACTAAGTCGTTGCGTCATAAAATTGATGTTTAATTTTGATGTAATTTTTCGTAGTAGGGATTAAATTAAATTGTTCTAATTTTTTTTTTTTTTTTGGTGGATTTTTCTATTATTGAGATCTTATATTATGAAAGTAATTATGTAAAGTGGAGTTTTATAGCTTCGTTAATTATTTTCTTTTATAGAGATTCTAAAATATGAAAAATAAAAAATTTATAACTTTATTGAAAACTTATTGGACTTTACAAGTAGATCTATAACAATGAGACTATTATTAACGTTTCAAAATTTTCACGATTAGCATATACATTCAAAATTACTCTCGAGCATGTTGTTGTTGGTTTCCTCGATGTATTCTCACTATACAATGTTGGTTATAAATACGGATTACCTTAATATAAGATGATTGGTTTGAACTACTAGTCGTCGCCTCGAGTATTGGCTGCTTTGATACATTTTTTTCTTTGTTGACATTATATTTTCTGACTTGACTGATTAATTTTTCCGTTCATAAATCTGAATTAAAACGTACGGAGGAAATTGAAAACTCGATGATTTTTTTGGACAATAATATCAATTTGTGGTAGAGATTTGTAACTTATAATATATTAATATTTTTACTAGTTGAGGCATACTAAATTATATCACTATTATATTATTAAAATATGGAAAACATTTATAACCCTAATATTTATGATGACAATAAATAATTTTATTAAGTATATTATAATAATTTATCAAAGGAATAAATAATTGTTTTTCTTTGTTTTAAAAAACTATTTTATTTATTCGCTACCAATTTTCTCGCGCTCTATCTTTTGTGCTAGCGATTCAGAGAACCGCGGTAGCGCAGAAGTAGCGAAGCTGAAGTAATTGCAATCCAGTATGTATCTTCTTCCGCTTGCTTCGTTTCTAATCTCTTATGTCGAATCCGCAACTTCTCTTCTTACAGATTTCTTGTTCGAATTTTGGATTTTGACTGCTTCTGTTTCGGAAGTCTCAATCGACGCGCATGAAATTGTCCGTTCTTATAAGATTTCGTACTATTTATTCGTCTATTAGATTCGAATCCTTTAGCTGTTTGGATCAAATTTCTTCTACGAAAATGAATCAAGATGAGATATCATTCCGAGGTTTTTGATTTAATTGGATCATGGATCGTATTTTCCTGTGTTATTGTGAAAACTCTTTGGTGGTGAAGGAAACTAAAATCCTGAATCGTTTTTTTTTTTTTTTTTTTGAGCTAGCCTGTTTATGAGTTTATCTGATAAAAATTCGTGCAAACGCTGAAGAATTTTGAACCATATGCTCCGTATTAGTGGCTTATTTTGTAAGACATTTTGTTTGAAGGATATTGCTGTTGGTGATAAAGATGGTCTTCCTGTGTTGGTCTCGTCCATCTCCACAGGAGCAGAAGACGTGCATTGACAGGCAAGAACGATAGGATCGTAACCCCCACCCCTAGCCAGAAAAAAGAAAAAGAAAACTCTCATAGAGATATGCCTGTCTCCCTTTTCTAAGTGGAATGTTACATGATGTTCATCATTAGGTCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGCTCTTGCCTGCAAGAAGATAAGGGGCTCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGTTTTCTGGCTATATACCTTTTGGTTGAACAGTAACGTATTAGATGAGAATTCTTGGTCTCTTTAACCCAGTGCAAATTTTGCAGGCATTTTGGGTTGAATTGGGCATTTGTTGATTCATCAACGCCAGTTCATCCGGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAAAACAGAGGTACCAATATGGCTAGGACATGTTTCAGCTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGTTCGTCCATCATTAACTTTTTTTCCAGGCTAATTTTCGTATTAATGTACTTGATAGTCCAGGTTTTAATCCCATTTTGAATCATATAATTGACTAGTGTGACTAATATGATCTTGAACTCTCTCCATTCCAGGCCGGTGAAGAACGGTTTTCGATCGAGATGGACTCGAACAGCCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCACATATTATCATTCCTTAGTTATCCTTATATAATTCTTCGGCAGAAGTATTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCCAAGCATTCCTAACTCCTGGTGTGCTTGTGTGTATGTTCTTAGTTATCCTTGTGTGTATGCAGTTAAGAATGCTTCTTTCTGCTCTTCAATCCTCCTATAGTGTGGCATCATCAGGAAATCGGAATAGCTCAACTATACAAATGAACTCTGTCATGATCATTGATGTTTCATAA

mRNA sequence

ATGAAGGAAATAGGGAATCTGAGGTTTGCTATTGCTCTTCTCACGTATATACTTACAGGCTATAGTAATGGAAATATGACCAGTTTCAATCGCAGAAGTAGCGAAGCTGAAGTAATTGCAATCCAGATATTGCTGTTGGTGATAAAGATGGTCTTCCTGTGTTGGTCTCGTCCATCTCCACAGGAGCAGAAGACGTGCATTGACAGGTCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGCTCTTGCCTGCAAGAAGATAAGGGGCTCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGGTTGAATTGGGCATTTGTTGATTCATCAACGCCAGTTCATCCGGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAAAACAGAGGTACCAATATGGCTAGGACATGTTTCAGCTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGGTTTTCGATCGAGATGGACTCGAACAGCCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCACATATTATCATTCCTTAGTTATCCTTATATAATTCTTCGGCAGAAGTATTTTGCTTATCAATCTACAAATGCATTAAGAATGCTTCTTTCTGCTCTTCAATCCTCCTATAGTGTGGCATCATCAGGAAATCGGAATAGCTCAACTATACAAATGAACTCTGTCATGATCATTGATGTTTCATAA

Coding sequence (CDS)

ATGAAGGAAATAGGGAATCTGAGGTTTGCTATTGCTCTTCTCACGTATATACTTACAGGCTATAGTAATGGAAATATGACCAGTTTCAATCGCAGAAGTAGCGAAGCTGAAGTAATTGCAATCCAGATATTGCTGTTGGTGATAAAGATGGTCTTCCTGTGTTGGTCTCGTCCATCTCCACAGGAGCAGAAGACGTGCATTGACAGGTCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGCTCTTGCCTGCAAGAAGATAAGGGGCTCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGGTTGAATTGGGCATTTGTTGATTCATCAACGCCAGTTCATCCGGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCTTCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAAAACAGAGGTACCAATATGGCTAGGACATGTTTCAGCTTTGGCAGTGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAACGGTTTTCGATCGAGATGGACTCGAACAGCCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCACATATTATCATTCCTTAGTTATCCTTATATAATTCTTCGGCAGAAGTATTTTGCTTATCAATCTACAAATGCATTAAGAATGCTTCTTTCTGCTCTTCAATCCTCCTATAGTGTGGCATCATCAGGAAATCGGAATAGCTCAACTATACAAATGAACTCTGTCATGATCATTGATGTTTCATAA

Protein sequence

MKEIGNLRFAIALLTYILTGYSNGNMTSFNRRSSEAEVIAIQILLLVIKMVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYVNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYPYIILRQKYFAYQSTNALRMLLSALQSSYSVASSGNRNSSTIQMNSVMIIDVS
Homology
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BLAST of CmaCh03G006430 vs. Swiss-Prot
Match: U548_ARATH (UPF0548 protein At2g17695 OS=Arabidopsis thaliana GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-73
Identity = 122/198 (61.62%), Postives = 160/198 (80.81%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 109
           MVFL W RPS ++Q+  I+++G+FNY +K+RG ++   + L+ED  + ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 110 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 169
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV++PLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 170 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 229
           +E+R +      F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 230 PYIILRQKYFAYQSTNAL 248
           PY+ LRQK+FA  S+ A+
Sbjct: 181 PYVKLRQKHFARHSSEAV 198

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BLAST of CmaCh03G006430 vs. Swiss-Prot
Match: U548_DICDI (UPF0548 protein OS=Dictyostelium discoideum GN=DDB_G0271742 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17
Identity = 65/217 (29.95%), Postives = 109/217 (50.23%), Query Frame = 1 

Query: 54  CWSRPSPQEQKTCID--RSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARILVG 113
           C+ +PS  + K  I+  R   F YS+ +   T + ++  + +       F ++  +I +G
Sbjct: 3   CFRKPSDSDIKQYINDRREEQFAYSNLY--GTQDYATKEEYEMDPKYSNFDVDQVKIQLG 62

Query: 114 SGVETYEKGKKALQNWRHFGLNWA-FVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYVN 173
           +GVE ++K   AL+ W+HF L+W  F   +TP+  G    + +K+   W++   +I Y+ 
Sbjct: 63  TGVECFQKAVAALKQWKHFDLDWVDFYFKNTPIAVGETVGILSKQVGFWILSFARINYLY 122

Query: 174 ENRGTNMARTCFSFGSGTLQGHLLAGEERFSIE-------MDSNSQVWYEILSFSKPAHI 233
           +    +     F +  GTL+ H+  GEERF IE             V+YE+LSFS+P++ 
Sbjct: 123 DGDQED-GSIKFGYSYGTLKDHVEKGEERFVIEWVRDPDGAPDKGAVYYEMLSFSEPSYW 182

Query: 234 LSFLSYPYIILRQKYFAYQSTNALRMLLSALQSSYSV 261
           LS L YP     Q  F   S N    +L A+ S+ +V
Sbjct: 183 LSQLGYPVTRYFQNKFVVDSCN---QMLKAVGSNQNV 213

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BLAST of CmaCh03G006430 vs. Swiss-Prot
Match: Y2035_DEIRA (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.3e-10
Identity = 42/137 (30.66%), Postives = 68/137 (49.64%), Query Frame = 1 

Query: 107 RILVGSGVETYEKGKKALQNWRHFGLNWAFV---DSSTPV-HPGVKFCVCAKEFLPWVVM 166
           R+ VG G   +E+ K AL+  + F  +W      ++STP+   G    +  + F PW   
Sbjct: 47  RVRVGEGEACWERAKAALRGGQMFQ-DWVLRPHGEASTPLSRQGATVVLLVRHFGPWGRR 106

Query: 167 PLQIVYVNENRGTNMARTC--FSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKP 226
              +  +  NR   +      + FG GTL GHL+ GEERF +E D+   VW+++ +FS+ 
Sbjct: 107 KWGLYSLMTNRVLYLVDEPDRYGFGYGTLPGHLVRGEERFLLERDAGGAVWFDLTTFSRA 166

Query: 227 AHILSFLSYPYIILRQK 238
           A   S  + P +   Q+
Sbjct: 167 ALPFSRFAQPLVGAAQR 182

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BLAST of CmaCh03G006430 vs. TrEMBL
Match: A0A0A0KKV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507400 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-106
Identity = 188/208 (90.38%), Postives = 197/208 (94.71%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDK-GLSQEGFLLNHARI 109
           MVFLCWSRPSPQEQK CI+R+GSFNY+SKFRGATANPSSCLQEDK G+SQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 110 LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVY 169
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVV+PLQIVY
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 170 VNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 229
           VNENR TN  RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 230 YPYIILRQKYFAYQSTNALRMLLSALQS 257
           YPYIILRQKYFA+QSTNA++  L+   S
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

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BLAST of CmaCh03G006430 vs. TrEMBL
Match: M5W4V4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023767mg PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.7e-89
Identity = 156/207 (75.36%), Postives = 176/207 (85.02%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 109
           MVFL W RPSP+EQK CIDRSGSFNY +KFRGAT    S LQEDKGLS  GFL NHAR+L
Sbjct: 1   MVFLSWIRPSPEEQKACIDRSGSFNYEAKFRGATTKSLSSLQEDKGLSNNGFLFNHARVL 60

Query: 110 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 169
           VGSGV+TYEKGK+ALQ+WRHFGLNWAFVD  TPV  GVKFCVC KEFLPWV+MPLQ+VYV
Sbjct: 61  VGSGVDTYEKGKRALQDWRHFGLNWAFVDPKTPVQNGVKFCVCVKEFLPWVMMPLQVVYV 120

Query: 170 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 229
           NENR +  +   F FG GTLQGHLLAGEERFSIE+D N+QVWYEILSFSKPAH LSF+ Y
Sbjct: 121 NENRPSKQSMASFRFGGGTLQGHLLAGEERFSIELDENNQVWYEILSFSKPAHPLSFIGY 180

Query: 230 PYIILRQKYFAYQSTNALRMLLSALQS 257
           PY++LRQKYFA+QS+NA+   L+AL+S
Sbjct: 181 PYVMLRQKYFAHQSSNAIMKHLNALKS 207

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BLAST of CmaCh03G006430 vs. TrEMBL
Match: A0A061DGD7_THECC (UPF0548 protein OS=Theobroma cacao GN=TCM_000110 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 5.0e-86
Identity = 145/200 (72.50%), Postives = 174/200 (87.00%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 109
           MVFLCW+RPSP++QK+CI++SG+FNY +K++GATA P SC++EDK LS++G+L+NHAR+L
Sbjct: 1   MVFLCWARPSPEQQKSCINKSGTFNYDTKYKGATAKPVSCIKEDKELSKDGYLVNHARVL 60

Query: 110 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 169
           VGSG++TYEKGK ALQNWRHFGLNWAFVD  TP+  GVKFCVC KEFLPWV+MPLQ+VYV
Sbjct: 61  VGSGLQTYEKGKAALQNWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVMMPLQVVYV 120

Query: 170 NENRG--TNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFL 229
            E++   T  A   F FGSGTLQGHLLAGEERFSIE+D N QVWYEILSFSKPAH LSF+
Sbjct: 121 KESKSAKTKKAVASFGFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHFLSFI 180

Query: 230 SYPYIILRQKYFAYQSTNAL 248
            YPY+ LRQKYFA+QS NA+
Sbjct: 181 GYPYVYLRQKYFAHQSANAV 200

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BLAST of CmaCh03G006430 vs. TrEMBL
Match: A0A067FVI3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028245mg PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 9.4e-85
Identity = 146/209 (69.86%), Postives = 174/209 (83.25%), Query Frame = 1 

Query: 45  LLVIKMVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLN 104
           +++  MVFL W RP+PQEQK CID+SG FNY +K++GATA P +CL+ED+GLS++GFLLN
Sbjct: 1   MMLTGMVFLSWGRPTPQEQKACIDKSGVFNYDTKYKGATAKPVACLKEDQGLSKDGFLLN 60

Query: 105 HARILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPL 164
           HAR+LVGSG+ETYEKGK AL+ WRHFGLNWAFVD  TP+  GVKFCVC KEFLPWV +PL
Sbjct: 61  HARVLVGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVTLPL 120

Query: 165 QIVYVNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHIL 224
           QIVYVNE+         F FGSGTLQGHLLAGEERFSIE+D N+QVWYEI+SFSKPA  L
Sbjct: 121 QIVYVNESIRKKKTAASFGFGSGTLQGHLLAGEERFSIELDDNNQVWYEIVSFSKPADFL 180

Query: 225 SFLSYPYIILRQKYFAYQSTNALRMLLSA 254
           SF+ YPY+ LRQKYFA+QS NA++  L+A
Sbjct: 181 SFIGYPYVQLRQKYFAHQSVNAVKKHLTA 209

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BLAST of CmaCh03G006430 vs. TrEMBL
Match: A0A0B0NXH0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_08471 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.2e-84
Identity = 141/200 (70.50%), Postives = 172/200 (86.00%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 109
           MVFLCW+RPSP++QK+CI +SG+FNY +K++GAT+ P SC++EDK LS++G+L+NHAR+L
Sbjct: 1   MVFLCWARPSPEQQKSCISKSGAFNYDTKYKGATSKPVSCIKEDKELSKDGYLINHARVL 60

Query: 110 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 169
           +GSG ETYEKGK ALQNW+HFGL+WAFVD  TP+  GVKFCVC KEFLPWV+MPLQ+VYV
Sbjct: 61  IGSGFETYEKGKTALQNWKHFGLDWAFVDPKTPIQNGVKFCVCLKEFLPWVIMPLQVVYV 120

Query: 170 NEN--RGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFL 229
           NEN    T  +   F FGSGTLQGHLLAGEERF+IE+D N QVWYE+LSFSKPAH LSF+
Sbjct: 121 NENTRAKTKKSLASFGFGSGTLQGHLLAGEERFTIELDENDQVWYEVLSFSKPAHFLSFI 180

Query: 230 SYPYIILRQKYFAYQSTNAL 248
            YPY+ LRQKYFA+QS NA+
Sbjct: 181 GYPYVQLRQKYFAHQSANAV 200

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BLAST of CmaCh03G006430 vs. TAIR10
Match: AT2G17695.1 (AT2G17695.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 278.1 bits (710), Expect = 6.0e-75
Identity = 122/198 (61.62%), Postives = 160/198 (80.81%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 109
           MVFL W RPS ++Q+  I+++G+FNY +K+RG ++   + L+ED  + ++GFL+NHAR+L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 110 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 169
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TPV  G KFC+C KE LPWV++PLQ+VYV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 170 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 229
           +E+R +      F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 230 PYIILRQKYFAYQSTNAL 248
           PY+ LRQK+FA  S+ A+
Sbjct: 181 PYVKLRQKHFARHSSEAV 198

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BLAST of CmaCh03G006430 vs. NCBI nr
Match: gi|659080608|ref|XP_008440883.1| (PREDICTED: UPF0548 protein At2g17695 isoform X1 [Cucumis melo])

HSP 1 Score: 399.4 bits (1025), Expect = 5.1e-108
Identity = 188/207 (90.82%), Postives = 196/207 (94.69%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 109
           MVFLCWSRPSPQEQK CI+R+GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHARIL
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 110 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 169
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVV+PLQIVYV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 170 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 229
           NENR TN  RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILS SKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 230 PYIILRQKYFAYQSTNALRMLLSALQS 257
           PY+ILRQKYFA+QSTNA +  L+   S
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLTPTHS 207

[Close]
BLAST of CmaCh03G006430 vs. NCBI nr
Match: gi|449434104|ref|XP_004134836.1| (PREDICTED: UPF0548 protein At2g17695 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 2.8e-106
Identity = 188/208 (90.38%), Postives = 197/208 (94.71%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDK-GLSQEGFLLNHARI 109
           MVFLCWSRPSPQEQK CI+R+GSFNY+SKFRGATANPSSCLQEDK G+SQEGFLLNHARI
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 110 LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVY 169
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVV+PLQIVY
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 170 VNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 229
           VNENR TN  RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 230 YPYIILRQKYFAYQSTNALRMLLSALQS 257
           YPYIILRQKYFA+QSTNA++  L+   S
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLTPTHS 208

[Close]
BLAST of CmaCh03G006430 vs. NCBI nr
Match: gi|1009144525|ref|XP_015889847.1| (PREDICTED: UPF0548 protein At2g17695 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 337.0 bits (863), Expect = 3.1e-89
Identity = 155/210 (73.81%), Postives = 180/210 (85.71%), Query Frame = 1 

Query: 47  VIKMVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHA 106
           V +MVFLCW+RPSPQEQK+CIDRSG+FNY +K+RGATA P SCL+EDK LS EGF LNHA
Sbjct: 71  VTEMVFLCWARPSPQEQKSCIDRSGAFNYDAKYRGATAKPLSCLKEDKELSHEGFALNHA 130

Query: 107 RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQI 166
           R+LVGSG+E YEKGK ALQ WRHFGLNWAFVD  TPV  G KFCVC KEFLPWV+MPL++
Sbjct: 131 RVLVGSGIEAYEKGKNALQAWRHFGLNWAFVDPKTPVQNGAKFCVCVKEFLPWVMMPLKV 190

Query: 167 VYVNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSF 226
           VYV+E + T  ++  F FGSGTLQGHLLAGEERFSIE+D N QVWYEILSFSKPAH+LSF
Sbjct: 191 VYVDE-KSTKQSKASFCFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHVLSF 250

Query: 227 LSYPYIILRQKYFAYQSTNALRMLLSALQS 257
           + YPY++LRQKYF++QSTNA+   L+ LQS
Sbjct: 251 IGYPYVMLRQKYFSHQSTNAVLKHLNPLQS 279

[Close]
BLAST of CmaCh03G006430 vs. NCBI nr
Match: gi|1009144527|ref|XP_015889848.1| (PREDICTED: UPF0548 protein At2g17695 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 337.0 bits (863), Expect = 3.1e-89
Identity = 155/210 (73.81%), Postives = 180/210 (85.71%), Query Frame = 1 

Query: 47  VIKMVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHA 106
           V +MVFLCW+RPSPQEQK+CIDRSG+FNY +K+RGATA P SCL+EDK LS EGF LNHA
Sbjct: 62  VTEMVFLCWARPSPQEQKSCIDRSGAFNYDAKYRGATAKPLSCLKEDKELSHEGFALNHA 121

Query: 107 RILVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQI 166
           R+LVGSG+E YEKGK ALQ WRHFGLNWAFVD  TPV  G KFCVC KEFLPWV+MPL++
Sbjct: 122 RVLVGSGIEAYEKGKNALQAWRHFGLNWAFVDPKTPVQNGAKFCVCVKEFLPWVMMPLKV 181

Query: 167 VYVNENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSF 226
           VYV+E + T  ++  F FGSGTLQGHLLAGEERFSIE+D N QVWYEILSFSKPAH+LSF
Sbjct: 182 VYVDE-KSTKQSKASFCFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHVLSF 241

Query: 227 LSYPYIILRQKYFAYQSTNALRMLLSALQS 257
           + YPY++LRQKYF++QSTNA+   L+ LQS
Sbjct: 242 IGYPYVMLRQKYFSHQSTNAVLKHLNPLQS 270

[Close]
BLAST of CmaCh03G006430 vs. NCBI nr
Match: gi|595810576|ref|XP_007203099.1| (hypothetical protein PRUPE_ppa023767mg [Prunus persica])

HSP 1 Score: 336.3 bits (861), Expect = 5.3e-89
Identity = 156/207 (75.36%), Postives = 176/207 (85.02%), Query Frame = 1 

Query: 50  MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 109
           MVFL W RPSP+EQK CIDRSGSFNY +KFRGAT    S LQEDKGLS  GFL NHAR+L
Sbjct: 1   MVFLSWIRPSPEEQKACIDRSGSFNYEAKFRGATTKSLSSLQEDKGLSNNGFLFNHARVL 60

Query: 110 VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 169
           VGSGV+TYEKGK+ALQ+WRHFGLNWAFVD  TPV  GVKFCVC KEFLPWV+MPLQ+VYV
Sbjct: 61  VGSGVDTYEKGKRALQDWRHFGLNWAFVDPKTPVQNGVKFCVCVKEFLPWVMMPLQVVYV 120

Query: 170 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 229
           NENR +  +   F FG GTLQGHLLAGEERFSIE+D N+QVWYEILSFSKPAH LSF+ Y
Sbjct: 121 NENRPSKQSMASFRFGGGTLQGHLLAGEERFSIELDENNQVWYEILSFSKPAHPLSFIGY 180

Query: 230 PYIILRQKYFAYQSTNALRMLLSALQS 257
           PY++LRQKYFA+QS+NA+   L+AL+S
Sbjct: 181 PYVMLRQKYFAHQSSNAIMKHLNALKS 207

The following BLAST results are available for this feature:
BLAST of CmaCh03G006430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
U548_ARATH1.1e-7361.62UPF0548 protein At2g17695 OS=Arabidopsis thaliana GN=At2g17695 PE=2 SV=1[more]
U548_DICDI1.4e-1729.95UPF0548 protein OS=Dictyostelium discoideum GN=DDB_G0271742 PE=3 SV=1[more]
Y2035_DEIRA8.3e-1030.66UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 2053... [more]
BLAST of CmaCh03G006430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKV8_CUCSA1.9e-10690.38Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507400 PE=4 SV=1[more]
M5W4V4_PRUPE3.7e-8975.36Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023767mg PE=4 SV=1[more]
A0A061DGD7_THECC5.0e-8672.50UPF0548 protein OS=Theobroma cacao GN=TCM_000110 PE=4 SV=1[more]
A0A067FVI3_CITSI9.4e-8569.86Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028245mg PE=4 SV=1[more]
A0A0B0NXH0_GOSAR1.2e-8470.50Uncharacterized protein OS=Gossypium arboreum GN=F383_08471 PE=4 SV=1[more]
BLAST of CmaCh03G006430 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17695.16.0e-7561.62 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CmaCh03G006430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659080608|ref|XP_008440883.1|5.1e-10890.82PREDICTED: UPF0548 protein At2g17695 isoform X1 [Cucumis melo][more]
gi|449434104|ref|XP_004134836.1|2.8e-10690.38PREDICTED: UPF0548 protein At2g17695 [Cucumis sativus][more]
gi|1009144525|ref|XP_015889847.1|3.1e-8973.81PREDICTED: UPF0548 protein At2g17695 isoform X1 [Ziziphus jujuba][more]
gi|1009144527|ref|XP_015889848.1|3.1e-8973.81PREDICTED: UPF0548 protein At2g17695 isoform X2 [Ziziphus jujuba][more]
gi|595810576|ref|XP_007203099.1|5.3e-8975.36hypothetical protein PRUPE_ppa023767mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018960DUF1990
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G006430.1CmaCh03G006430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018960Domain of unknown function DUF1990PFAMPF09348DUF1990coord: 96..245
score: 1.1
NoneNo IPR availablePANTHERPTHR34202FAMILY NOT NAMEDcoord: 46..264
score: 4.3E
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 46..264
score: 4.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G006430Cucsa.044030Cucumber (Gy14) v1cgycmaB0047
CmaCh03G006430Cla014329Watermelon (97103) v1cmawmB632
CmaCh03G006430Csa6G507400Cucumber (Chinese Long) v2cmacuB681
CmaCh03G006430MELO3C007951Melon (DHL92) v3.5.1cmameB617
CmaCh03G006430ClCG01G020680Watermelon (Charleston Gray)cmawcgB579
CmaCh03G006430CSPI06G32240Wild cucumber (PI 183967)cmacpiB689
CmaCh03G006430CmoCh03G006700Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G006430Lsi01G005560Bottle gourd (USVL1VR-Ls)cmalsiB597
CmaCh03G006430MELO3C007951.2Melon (DHL92) v3.6.1cmamedB703
CmaCh03G006430CsaV3_6G047600Cucumber (Chinese Long) v3cmacucB0809
CmaCh03G006430Cla97C01G020180Watermelon (97103) v2cmawmbB670
CmaCh03G006430Bhi03G000591Wax gourdcmawgoB0788
CmaCh03G006430Carg00552Silver-seed gourdcarcmaB0567
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G006430Cucumber (Chinese Long) v3cmacucB0786
CmaCh03G006430Watermelon (97103) v2cmawmbB673
CmaCh03G006430Wax gourdcmawgoB0773
CmaCh03G006430Cucurbita maxima (Rimu)cmacmaB523
CmaCh03G006430Cucumber (Gy14) v1cgycmaB0896
CmaCh03G006430Cucurbita moschata (Rifu)cmacmoB667
CmaCh03G006430Wild cucumber (PI 183967)cmacpiB666
CmaCh03G006430Cucumber (Chinese Long) v2cmacuB658
CmaCh03G006430Melon (DHL92) v3.5.1cmameB606
CmaCh03G006430Watermelon (Charleston Gray)cmawcgB571
CmaCh03G006430Watermelon (97103) v1cmawmB616
CmaCh03G006430Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G006430Cucurbita pepo (Zucchini)cmacpeB661
CmaCh03G006430Cucurbita pepo (Zucchini)cmacpeB671
CmaCh03G006430Bottle gourd (USVL1VR-Ls)cmalsiB617
CmaCh03G006430Cucumber (Gy14) v2cgybcmaB405
CmaCh03G006430Cucumber (Gy14) v2cgybcmaB831
CmaCh03G006430Melon (DHL92) v3.6.1cmamedB690
CmaCh03G006430Silver-seed gourdcarcmaB0491
CmaCh03G006430Silver-seed gourdcarcmaB0912