CmaCh03G002660 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G002660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cma_Chr03 : 3677324 .. 3677980 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGCCTCCTCCTCCACATCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGCCACCGCAAGCTCCCGGAGTCGCCGCAACCTTTGCATCGGAGTCTCCGTCGTCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGCCCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGTTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGATTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATAGATGCAGGTCAGACCACGCAGATGAACATTAGGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAAAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGAAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTGA

mRNA sequence

ATGGAAGTTGCCTCCTCCTCCACATCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGCCACCGCAAGCTCCCGGAGTCGCCGCAACCTTTGCATCGGAGTCTCCGTCGTCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGCCCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGTTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGATTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATAGATGCAGGTCAGACCACGCAGATGAACATTAGGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAAAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGAAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTGA

Coding sequence (CDS)

ATGGAAGTTGCCTCCTCCTCCACATCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGCCACCGCAAGCTCCCGGAGTCGCCGCAACCTTTGCATCGGAGTCTCCGTCGTCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCCTTCACGGTGTTCAAGCCAAAGCGCCCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGTTGAGCGTAGTCAGAACCTCTGTCGATTTCAACATCACTCTGATTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGCGTTTTTCAATTACAGAGGCGAACTGGTTGGCGAGGTGCCGATTCTGGCCGCGCAAATAGATGCAGGTCAGACCACGCAGATGAACATTAGGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTGTTCTTCGATGTCGTAGCCGGATCGATGCCGTTGAATGCGTACGCGAAAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACATATCGGAGAGAAATATTAAAGATCAACAGTGTAATTACCATACTAAGATCTGA

Protein sequence

MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI

Homology

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BLAST of CmaCh03G002660 vs. TrEMBL
Match: A0A0A0L094_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.5e-74
Identity = 150/218 (68.81%), Postives = 183/218 (83.94%), Query Frame = 1


Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           ME+ASSS+S LIKD KST+S   A   SR RRN CIG+S  +A++LL+++II+ILAFTVF
Sbjct: 1   MEIASSSSS-LIKDPKSTQSTAAAATRSRKRRNTCIGIS--IAILLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TLIAD+AITNPNKVGFSY NSTAF NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELVGE PI+A +IDAG+  +MNI L I+ADR +KT+TVF D VAGSMPLN Y ++SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIH+VS+TSCDF+++ISER I DQQCNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

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BLAST of CmaCh03G002660 vs. TrEMBL
Match: A0A0L9U3N9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g067800 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-46
Identity = 97/193 (50.26%), Postives = 137/193 (70.98%), Query Frame = 1


Query: 26  ASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVR 85
           A S   R +C+   +V  VV+ +V++IVILA TVFK K P T ++S  ++DF MSL + R
Sbjct: 3   AGSGKGRKVCL---IVTGVVIALVLVIVILALTVFKAKHPTTVVDSTKLEDFHMSLDIAR 62

Query: 86  TSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIR 145
             VD N+TL  DV++ NPNKVGF YS+STA  NYRG+L+GEVPI A +I +G+T   N+ 
Sbjct: 63  LRVDLNVTLSTDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPIPAGEISSGETKGFNLT 122

Query: 146 LRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISER 205
           L I+ADR +  S +F DV +G++PLN + ++SGKV ILG   +H+VS+TSCD +IN+S R
Sbjct: 123 LTIMADRLLSNSQLFSDVTSGTLPLNTFVRISGKVNILGFIKVHVVSSTSCDVAINLSNR 182

Query: 206 NIKDQQCNYHTKI 219
            + +Q+C Y TK+
Sbjct: 183 TVGNQECQYRTKL 192

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BLAST of CmaCh03G002660 vs. TrEMBL
Match: W9SMP2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022768 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-45
Identity = 106/225 (47.11%), Postives = 151/225 (67.11%), Query Frame = 1


Query: 1   MEVASSSTS-------TLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIV 60
           MEV+SSS         T  K S S+ +     + +R RR LC+ +S  VA VL +V I V
Sbjct: 1   MEVSSSSPPPSKKGPPTPTKPSLSSAAAAAGRSPNR-RRRLCVCISATVAAVLAIVFIAV 60

Query: 61  ILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNS 120
           IL+ TVFKPKRPITT+N VS+ D  +SL+V R  +D N+T+  D+++ NPNKV F Y N+
Sbjct: 61  ILSQTVFKPKRPITTVNDVSLKD--LSLNVARLGIDLNVTVGVDLSVKNPNKVDFRYGNT 120

Query: 121 TAFFNYRGELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAY 180
           T+  +YRGE VGE  I   +I AG+T  MN+ L ++ADR +  S V+ D +AG +P N+Y
Sbjct: 121 TSVLSYRGEQVGEAAIPGGEISAGETVPMNVTLTVMADRLLSRSQVYSDFLAGDVPFNSY 180

Query: 181 AKVSGKVMILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            +++G+V ILGIF IH+VS TSC+F++++S R + DQ+C Y TK+
Sbjct: 181 TRIAGRVTILGIFKIHVVSVTSCEFAVDVSNRTVSDQRCTYKTKL 222

[Close]

BLAST of CmaCh03G002660 vs. TrEMBL
Match: Q1STP6_MEDTR (Harpin-induced 1 OS=Medicago truncatula GN=MTR_8g005060 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-44
Identity = 90/193 (46.63%), Postives = 134/193 (69.43%), Query Frame = 1


Query: 26  ASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVR 85
           A +   R  C+   +V  V + +V++IVILAFTVFK K P+TT+NS+ + DFD++L + +
Sbjct: 3   AGAGKGRKACL---IVTTVFIAIVLLIVILAFTVFKSKHPVTTVNSLKLRDFDVNLDIAK 62

Query: 86  TSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIR 145
             VD N+TL  DV++ NPNKVGF YSN+TA  NYRG+L+GEVPI A  I +G+T   N+ 
Sbjct: 63  LRVDLNVTLDVDVSVKNPNKVGFKYSNTTAHLNYRGQLIGEVPISAGDISSGETKGFNLT 122

Query: 146 LRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISER 205
           L  +ADR +  S +F D+ +G++PLN +  + GKV ILG   +H++S+ SCDF++N S +
Sbjct: 123 LTFMADRLLSNSQLFSDITSGTLPLNTFLTIFGKVNILGFIKVHVISSASCDFAVNTSNK 182

Query: 206 NIKDQQCNYHTKI 219
            + +Q+C Y TK+
Sbjct: 183 TVGNQECQYKTKL 192

[Close]

BLAST of CmaCh03G002660 vs. TrEMBL
Match: A0A151SYG2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_015274 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.8e-44
Identity = 88/187 (47.06%), Postives = 136/187 (72.73%), Query Frame = 1


Query: 32  RNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTSVDFN 91
           R +C+   ++  VV+ +V++IVILA TVFK K P+TT+NSV ++DF + L + +  VD N
Sbjct: 9   RKVCL---IITGVVIAIVLLIVILALTVFKAKHPVTTVNSVKLEDFHLGLDIAKLKVDLN 68

Query: 92  ITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIRLRILAD 151
           +TL  D+++ NPNKVGF +S+S A  NYRG+ +GEVP+ A +I +  T + N+ L I+AD
Sbjct: 69  VTLGVDISVKNPNKVGFKFSDSVANLNYRGQQIGEVPVPAGEISSDATKEFNLSLTIMAD 128

Query: 152 RFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISERNIKDQQ 211
           R +  S ++ DV +G++PLN + K+SGKV ILG   +H+VS+TSCDF+++IS R +++Q+
Sbjct: 129 RLLSDSQLYSDVTSGTLPLNTFVKISGKVRILGFIKVHVVSSTSCDFAVDISTRAVENQE 188

Query: 212 CNYHTKI 219
           C Y TK+
Sbjct: 189 CKYKTKL 192

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BLAST of CmaCh03G002660 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 174.1 bits (440), Expect = 9.5e-44
Identity = 92/205 (44.88%), Postives = 141/205 (68.78%), Query Frame = 1


Query: 15  SKSTKSVVDATASS-RSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVS 74
           S  T+S    TA   R +RN  I +   + ++LL+ ++IVILAFT+FKPKRP TTI+SV+
Sbjct: 31  SMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVT 90

Query: 75  IDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQ 134
           +D    S++ +   V  N+TL  D+++ NPN++GFSY +S+A  NYRG+++GE P+ A +
Sbjct: 91  VDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANR 150

Query: 135 IDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVST 194
           I A +T  +NI L ++ADR +  + +  DV+AG +PLN + KV+GKV +L IF I + S+
Sbjct: 151 IAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSS 210

Query: 195 TSCDFSINISERNIKDQQCNYHTKI 219
           +SCD SI++S+RN+  Q C Y TK+
Sbjct: 211 SSCDLSISVSDRNVTSQHCKYSTKL 235

[Close]

BLAST of CmaCh03G002660 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 91.3 bits (225), Expect = 8.1e-19
Identity = 68/209 (32.54%), Postives = 114/209 (54.55%), Query Frame = 1


Query: 9   STLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITT 68
           +T++  S  + S +  T  SR+R    I    V A  L++  I++ L FTVF+ K PI  
Sbjct: 13  ATILPVSDESASNIKNTHRSRNRIKCSI---CVTATSLILTTIVLTLVFTVFRVKDPIIK 72

Query: 69  INSVSIDDFDMSLSVVRTS----VDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELV 128
           +N V ++  D   SV  T+    +  NI++I DV++ NPN   F YSN+T    Y+G LV
Sbjct: 73  MNGVMVNGLD---SVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLV 132

Query: 129 GEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVV-AGSMPLNAYAKVSGKVMIL 188
           GE   L  +    +T++MN+ + I+ DR +    +  ++  +G + + +Y +V GKV I+
Sbjct: 133 GEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIM 192

Query: 189 GIFNIHMVSTTSCDFSINISERNIKDQQC 213
           GI   H+    +C  ++NI+ + I+D  C
Sbjct: 193 GIVKKHVTVKMNCTMAVNITGQAIQDVDC 215

[Close]

BLAST of CmaCh03G002660 vs. TAIR10
Match: AT1G64450.1 (AT1G64450.1 Glycine-rich protein family)

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-07
Identity = 38/115 (33.04%), Postives = 64/115 (55.65%), Query Frame = 1


Query: 28  SRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVRTS 87
           S  R NL    +V    +L+++V+++++ FTVFKPK P  ++N+V +  F +S +     
Sbjct: 10  SSGRTNLA-SCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA--- 69

Query: 88  VDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQM 143
              N +    VA+ NPN+  FS+ +S+    Y G  VG + I A +ID+G+   M
Sbjct: 70  ---NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYM 117

[Close]

BLAST of CmaCh03G002660 vs. NCBI nr
Match: gi|449449825|ref|XP_004142665.1| (PREDICTED: uncharacterized protein LOC101208230 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73
Identity = 150/218 (68.81%), Postives = 183/218 (83.94%), Query Frame = 1


Query: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60
           ME+ASSS+S LIKD KST+S   A   SR RRN CIG+S  +A++LL+++II+ILAFTVF
Sbjct: 1   MEIASSSSS-LIKDPKSTQSTAAAATRSRKRRNTCIGIS--IAILLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TLIAD+AITNPNKVGFSY NSTAF NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180
           GELVGE PI+A +IDAG+  +MNI L I+ADR +KT+TVF D VAGSMPLN Y ++SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
            ILGIFNIH+VS+TSCDF+++ISER I DQQCNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

[Close]

BLAST of CmaCh03G002660 vs. NCBI nr
Match: gi|659126678|ref|XP_008463309.1| (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.8e-73
Identity = 151/219 (68.95%), Postives = 187/219 (85.39%), Query Frame = 1


Query: 1   MEVASSSTSTLIKDSKSTKSVVDATAS-SRSRRNLCIGVSVVVAVVLLVVVIIVILAFTV 60
           ME+ASSS+S+ IKD KST+S   A A+ SR RRN CIG+S+  A++LL++++I+ILAFTV
Sbjct: 1   MEIASSSSSS-IKDPKSTQSAAAAAAARSRKRRNTCIGISI--AILLLLIILIIILAFTV 60

Query: 61  FKPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNY 120
           FK KRPITT+NSV++ D D+SL++ R SVD N+TLIA +AITNPNKVGFSY NSTAF NY
Sbjct: 61  FKAKRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNY 120

Query: 121 RGELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGK 180
           RGELVGE PI+A +IDAG+  +MNI L I+ADR +KT+TVF DVVAGSMPLN YA++SGK
Sbjct: 121 RGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGK 180

Query: 181 VMILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 219
           V ILGIFNIH+VSTTSCDF+++ISER + DQQCNYHTKI
Sbjct: 181 VKILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

[Close]

BLAST of CmaCh03G002660 vs. NCBI nr
Match: gi|1009159365|ref|XP_015897772.1| (PREDICTED: uncharacterized protein LOC107431396 [Ziziphus jujuba])

HSP 1 Score: 196.8 bits (499), Expect = 3.9e-47
Identity = 102/197 (51.78%), Postives = 145/197 (73.60%), Query Frame = 1


Query: 25  TASSRSR---RNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSL 84
           T S R R   R +C+GV   +AVV++  VIIVIL+ TVFKPKRP+TTI++VS+ D D+SL
Sbjct: 8   TESGRRRNRSRAICLGV---MAVVVVAAVIIVILSLTVFKPKRPVTTIDAVSLADMDVSL 67

Query: 85  SVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQ 144
           +V + +VD N+TL  D+++ NPNKVGF Y++STAF NYRG+ VGE  I A  I + +T  
Sbjct: 68  NVAKLAVDLNVTLDVDLSVRNPNKVGFKYADSTAFLNYRGQTVGEASIPAGGISSDETKP 127

Query: 145 MNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSIN 204
           MN+ L ++ADR + TS ++ DV+AG++P NA  ++SGKV ILG+  +H+VSTTSCDF++ 
Sbjct: 128 MNLTLTVMADRLLSTSQIYSDVLAGTVPFNARTRISGKVSILGVVKVHVVSTTSCDFNVF 187

Query: 205 ISERNIKDQQCNYHTKI 219
           +S R++  Q C Y TK+
Sbjct: 188 VSNRSVGGQTCQYKTKL 201

[Close]

BLAST of CmaCh03G002660 vs. NCBI nr
Match: gi|951063235|ref|XP_014523231.1| (PREDICTED: uncharacterized protein LOC106779604 [Vigna radiata var. radiata])

HSP 1 Score: 194.5 bits (493), Expect = 1.9e-46
Identity = 98/193 (50.78%), Postives = 137/193 (70.98%), Query Frame = 1


Query: 26  ASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVR 85
           A S   R +C+   +V  VV+ +V++IVILA TVFK K P T ++S  ++DF MSL + R
Sbjct: 3   AGSGKGRKVCL---IVTGVVIALVLVIVILALTVFKAKHPTTVVDSTKLEDFHMSLDIAR 62

Query: 86  TSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIR 145
             VD N+TL  DV++ NPNKVGF YS+STA  NYRG+L+GEVPI A +I +G+T   N+ 
Sbjct: 63  LRVDLNVTLRTDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPIPAGEISSGETKGFNLT 122

Query: 146 LRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISER 205
           L I+ADR +  S +F DV +G++PLN + ++SGKV ILG   +H+VS+TSCD +INIS R
Sbjct: 123 LTIMADRLLSNSQLFSDVTSGTLPLNTFVRISGKVNILGFIKVHVVSSTSCDVAINISNR 182

Query: 206 NIKDQQCNYHTKI 219
            + +Q+C Y TK+
Sbjct: 183 TVGNQECQYRTKL 192

[Close]

BLAST of CmaCh03G002660 vs. NCBI nr
Match: gi|920694072|gb|KOM37297.1| (hypothetical protein LR48_Vigan03g067800 [Vigna angularis])

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46
Identity = 97/193 (50.26%), Postives = 137/193 (70.98%), Query Frame = 1


Query: 26  ASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVVR 85
           A S   R +C+   +V  VV+ +V++IVILA TVFK K P T ++S  ++DF MSL + R
Sbjct: 3   AGSGKGRKVCL---IVTGVVIALVLVIVILALTVFKAKHPTTVVDSTKLEDFHMSLDIAR 62

Query: 86  TSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYRGELVGEVPILAAQIDAGQTTQMNIR 145
             VD N+TL  DV++ NPNKVGF YS+STA  NYRG+L+GEVPI A +I +G+T   N+ 
Sbjct: 63  LRVDLNVTLSTDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPIPAGEISSGETKGFNLT 122

Query: 146 LRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKVMILGIFNIHMVSTTSCDFSINISER 205
           L I+ADR +  S +F DV +G++PLN + ++SGKV ILG   +H+VS+TSCD +IN+S R
Sbjct: 123 LTIMADRLLSNSQLFSDVTSGTLPLNTFVRISGKVNILGFIKVHVVSSTSCDVAINLSNR 182

Query: 206 NIKDQQCNYHTKI 219
            + +Q+C Y TK+
Sbjct: 183 TVGNQECQYRTKL 192

The following BLAST results are available for this feature:

BLAST of CmaCh03G002660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh03G002660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L094_CUCSA	7.5e-74	68.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337360 PE=4 SV=1	[more]
A0A0L9U3N9_PHAAN	1.7e-46	50.26	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g067800 PE=4 SV=1	[more]
W9SMP2_9ROSA	2.5e-45	47.11	Uncharacterized protein OS=Morus notabilis GN=L484_022768 PE=4 SV=1	[more]
Q1STP6_MEDTR	1.6e-44	46.63	Harpin-induced 1 OS=Medicago truncatula GN=MTR_8g005060 PE=2 SV=1	[more]
A0A151SYG2_CAJCA	2.8e-44	47.06	Uncharacterized protein OS=Cajanus cajan GN=KK1_015274 PE=4 SV=1	[more]

BLAST of CmaCh03G002660 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54200.1	9.5e-44	44.88	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G46150.1	8.1e-19	32.54	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G64450.1	4.2e-07	33.04	Glycine-rich protein family	[more]

BLAST of CmaCh03G002660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449825\|ref\|XP_004142665.1\|	1.1e-73	68.81	PREDICTED: uncharacterized protein LOC101208230 [Cucumis sativus]	[more]
gi\|659126678\|ref\|XP_008463309.1\|	1.8e-73	68.95	PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo]	[more]
gi\|1009159365\|ref\|XP_015897772.1\|	3.9e-47	51.78	PREDICTED: uncharacterized protein LOC107431396 [Ziziphus jujuba]	[more]
gi\|951063235\|ref\|XP_014523231.1\|	1.9e-46	50.78	PREDICTED: uncharacterized protein LOC106779604 [Vigna radiata var. radiata]	[more]
gi\|920694072\|gb\|KOM37297.1\|	2.5e-46	50.26	hypothetical protein LR48_Vigan03g067800 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G002660.1	CmaCh03G002660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 97..184 score: 6.6
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 20..218 score: 6.2
None	No IPR available	PANTHER	PTHR31852:SF43	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 20..218 score: 6.2
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 46..189 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G002660	Cucsa.130830	Cucumber (Gy14) v1	cgycmaB0354
CmaCh03G002660	Cla012059	Watermelon (97103) v1	cmawmB633
CmaCh03G002660	Csa4G337360	Cucumber (Chinese Long) v2	cmacuB668
CmaCh03G002660	MELO3C025270	Melon (DHL92) v3.5.1	cmameB610
CmaCh03G002660	ClCG04G006090	Watermelon (Charleston Gray)	cmawcgB585
CmaCh03G002660	CSPI04G16880	Wild cucumber (PI 183967)	cmacpiB677
CmaCh03G002660	CmoCh07G012370	Cucurbita moschata (Rifu)	cmacmoB668
CmaCh03G002660	CmoCh03G002800	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G002660	Lsi01G016430	Bottle gourd (USVL1VR-Ls)	cmalsiB601
CmaCh03G002660	Cp4.1LG10g07250	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G002660	Cp4.1LG19g01710	Cucurbita pepo (Zucchini)	cmacpeB672
CmaCh03G002660	MELO3C025270.2	Melon (DHL92) v3.6.1	cmamedB693
CmaCh03G002660	CsaV3_4G027470	Cucumber (Chinese Long) v3	cmacucB0797
CmaCh03G002660	Cla97C04G072650	Watermelon (97103) v2	cmawmbB684
CmaCh03G002660	Bhi03G001799	Wax gourd	cmawgoB0799
CmaCh03G002660	CsGy4G016180	Cucumber (Gy14) v2	cgybcmaB533
CmaCh03G002660	Carg19543	Silver-seed gourd	carcmaB0887
CmaCh03G002660	Carg12630	Silver-seed gourd	carcmaB0396

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh03G002660	CmaCh07G011920	Cucurbita maxima (Rimu)	cmacmaB524

The following block(s) are covering this gene:

None