ClCG04G006090 (gene) Watermelon (Charleston Gray)

NameClCG04G006090
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family LENGTH=235
LocationCG_Chr04 : 20436099 .. 20436731 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCACCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATAATCATTTTAGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCTATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCGACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTGTTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGCAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACTTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

mRNA sequence

ATGGAAATCGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCACCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATAATCATTTTAGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCTATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCGACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTGTTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGCAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACTTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

Coding sequence (CDS)

ATGGAAATCGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCACCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATAATCATTTTAGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCTATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCGACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTGTTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGCAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACTTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

Protein sequence

MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI
BLAST of ClCG04G006090 vs. TrEMBL
Match: A0A0A0L094_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.1e-97
Identity = 188/215 (87.44%), Postives = 203/215 (94.42%), Query Frame = 1

Query: 1   MEIASSSS--VKDPKSTQSATA---RSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAK 60
           MEIASSSS  +KDPKSTQS  A   RSR+RRNTCIG+SIAI+LLL+I+IIILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGEL 120
           RPIT +NSVALADLDVSLNLA V+VDINVTLIAD+AITNPNKVGFSY NSTAFLNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           GIFNIHVVS+TSCDFNVDISERKIGDQQCNYHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of ClCG04G006090 vs. TrEMBL
Match: A0A0L9U3N9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g067800 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55
Identity = 108/191 (56.54%), Postives = 145/191 (75.92%), Query Frame = 1

Query: 20  ARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLARVA 79
           A S + R  C+ V+  +V+ LV++I+ILA TVFKAK P T ++S  L D  +SL++AR+ 
Sbjct: 3   AGSGKGRKVCLIVT-GVVIALVLVIVILALTVFKAKHPTTVVDSTKLEDFHMSLDIARLR 62

Query: 80  VDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLT 139
           VD+NVTL  DV++ NPNKVGF YS+STA LNYRG+L+GE PI AG I +G+ K  N+TLT
Sbjct: 63  VDLNVTLSTDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPIPAGEISSGETKGFNLTLT 122

Query: 140 IMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKI 199
           IMADRLL  S +FSDV +G++PLNT+ RISGKV ILG   +HVVS+TSCD  +++S R +
Sbjct: 123 IMADRLLSNSQLFSDVTSGTLPLNTFVRISGKVNILGFIKVHVVSSTSCDVAINLSNRTV 182

Query: 200 GDQQCNYHTKI 211
           G+Q+C Y TK+
Sbjct: 183 GNQECQYRTKL 192

BLAST of ClCG04G006090 vs. TrEMBL
Match: W9SMP2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022768 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 4.4e-55
Identity = 119/224 (53.12%), Postives = 155/224 (69.20%), Query Frame = 1

Query: 1   MEIASSS---SVKDP--------KSTQSATARS---RRRRNTCIGVSIAIVLLLVILIII 60
           ME++SSS   S K P         S  +A  RS   RRR   CI  ++A VL +V + +I
Sbjct: 1   MEVSSSSPPPSKKGPPTPTKPSLSSAAAAAGRSPNRRRRLCVCISATVAAVLAIVFIAVI 60

Query: 61  LAFTVFKAKRPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNST 120
           L+ TVFK KRPIT +N V+L DL  SLN+AR+ +D+NVT+  D+++ NPNKV F Y N+T
Sbjct: 61  LSQTVFKPKRPITTVNDVSLKDL--SLNVARLGIDLNVTVGVDLSVKNPNKVDFRYGNTT 120

Query: 121 AFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYT 180
           + L+YRGE VGEA I  G I AG+   MN+TLT+MADRLL  S V+SD +AG +P N+YT
Sbjct: 121 SVLSYRGEQVGEAAIPGGEISAGETVPMNVTLTVMADRLLSRSQVYSDFLAGDVPFNSYT 180

Query: 181 RISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           RI+G+V ILGIF IHVVS TSC+F VD+S R + DQ+C Y TK+
Sbjct: 181 RIAGRVTILGIFKIHVVSVTSCEFAVDVSNRTVSDQRCTYKTKL 222

BLAST of ClCG04G006090 vs. TrEMBL
Match: B9IGY4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s14900g PE=4 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 9.8e-55
Identity = 102/210 (48.57%), Postives = 155/210 (73.81%), Query Frame = 1

Query: 1   MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITA 60
           M++ SS +     + ++ + +  +RRN C+GV+ A++L + +L++IL  TVFK K+P T 
Sbjct: 1   MDVESSKAA----AMKAESPKKHKRRNICLGVTAAVILFIFLLLLILGLTVFKPKQPTTT 60

Query: 61  INSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120
           ++S +++D+ VS ++AR+ VD+NV+L  D++I NPNKV   Y NS+AFLNYRG++VGEAP
Sbjct: 61  VDSTSISDMKVSFDIARLRVDVNVSLDVDLSIKNPNKVSVKYKNSSAFLNYRGQVVGEAP 120

Query: 121 ITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNI 180
           I AG+I A + + +N+T+T+MADRLL  S  FSDV+AG++P NT T+ISGK  +  +FN+
Sbjct: 121 IPAGKILADKTQPINVTVTLMADRLLSDSQFFSDVMAGTIPFNTLTKISGKASVFNLFNV 180

Query: 181 HVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           H+ ST+SCD  V +S R IGDQ+C Y TK+
Sbjct: 181 HITSTSSCDLLVFVSNRTIGDQKCKYKTKL 206

BLAST of ClCG04G006090 vs. TrEMBL
Match: V7AQU5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G060100g PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-54
Identity = 104/185 (56.22%), Postives = 142/185 (76.76%), Query Frame = 1

Query: 26  RNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLARVAVDINVT 85
           R  C+ V+  +V+ LV+LI+ILA TVFKAK P+T ++S  L D  VSL++A++ VD+NVT
Sbjct: 9   RKVCLTVT-GVVIALVLLIVILALTVFKAKHPVTTVDSTKLEDFHVSLDIAKLRVDLNVT 68

Query: 86  LIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMADRL 145
           L  DV++ NPNKVGF YS+S A LNYRG+L+GE P+ AG I +G+ K  N+TLTIMADRL
Sbjct: 69  LRTDVSVMNPNKVGFKYSDSIAHLNYRGQLIGEVPLPAGEISSGETKGFNLTLTIMADRL 128

Query: 146 LKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQQCN 205
           L  S +FSDV +G++PLNT+ RISGKV ILG   +HV+S+TSCD  +++S R +G+Q+C 
Sbjct: 129 LSNSQLFSDVTSGTLPLNTFVRISGKVSILGFIKVHVLSSTSCDLVINLSNRTVGNQECQ 188

Query: 206 YHTKI 211
           Y TK+
Sbjct: 189 YKTKL 192

BLAST of ClCG04G006090 vs. TAIR10
Match: AT3G54200.1 (AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 197.6 bits (501), Expect = 7.7e-51
Identity = 98/208 (47.12%), Postives = 147/208 (70.67%), Query Frame = 1

Query: 6   SSSVKDPKSTQSATARS-RRRRNT--CIGVSIAIVLLLVILIIILAFTVFKAKRPITAIN 65
           ++S  + +S  + TA+  RR+RN   CI  +I ++LL+ I+I+ILAFT+FK KRP T I+
Sbjct: 28  NASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTID 87

Query: 66  SVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPIT 125
           SV +  L  S+N   + V +N+TL  D+++ NPN++GFSY +S+A LNYRG+++GEAP+ 
Sbjct: 88  SVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLP 147

Query: 126 AGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHV 185
           A RI A +   +NITLT+MADRLL  + + SDV+AG +PLNT+ +++GKV +L IF I V
Sbjct: 148 ANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKV 207

Query: 186 VSTTSCDFNVDISERKIGDQQCNYHTKI 211
            S++SCD ++ +S+R +  Q C Y TK+
Sbjct: 208 QSSSSCDLSISVSDRNVTSQHCKYSTKL 235

BLAST of ClCG04G006090 vs. TAIR10
Match: AT2G46150.1 (AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-26
Identity = 73/200 (36.50%), Postives = 109/200 (54.50%), Query Frame = 1

Query: 12  PKSTQSA-----TARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVAL 71
           P S +SA     T RSR R    I V+ A  L+L  +++ L FTVF+ K PI  +N V +
Sbjct: 17  PVSDESASNIKNTHRSRNRIKCSICVT-ATSLILTTIVLTLVFTVFRVKDPIIKMNGVMV 76

Query: 72  ADLDVSLNLARVAV-DINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGR 131
             LD      +V +   N+++I DV++ NPN   F YSN+T  + Y+G LVGEA    G+
Sbjct: 77  NGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGK 136

Query: 132 IDAGQRKEMNITLTIMADRLLKTSTVFSDVV-AGSMPLNTYTRISGKVRILGIFNIHVVS 191
               +   MN+T+ IM DR+L    +  ++  +G + + +YTR+ GKV+I+GI   HV  
Sbjct: 137 ARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTV 196

Query: 192 TTSCDFNVDISERKIGDQQC 205
             +C   V+I+ + I D  C
Sbjct: 197 KMNCTMAVNITGQAIQDVDC 215

BLAST of ClCG04G006090 vs. TAIR10
Match: AT1G64450.1 (AT1G64450.1 Glycine-rich protein family)

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-13
Identity = 53/150 (35.33%), Postives = 78/150 (52.00%), Query Frame = 1

Query: 18  ATARSRRR---RNTCIGVSIAIVLLLVILIIILA--FTVFKAKRPITAINSVALADLDVS 77
           A    RRR   R      ++A V LL++L+++L   FTVFK K P  ++N+V L    VS
Sbjct: 2   AKPHDRRRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVS 61

Query: 78  LNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRK 137
            N A      N +    VA+ NPN+  FS+ +S+  L Y G  VG   I AG+ID+G+ +
Sbjct: 62  NNTA------NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQ 121

Query: 138 EMNITLTIMADRLL-KTSTVFSDVVAGSMP 162
            M  T T+ +  +   +S+  S V A  +P
Sbjct: 122 YMAATFTVHSFPISPPSSSAISTVSAAVIP 145


HSP 2 Score: 32.3 bits (72), Expect = 4.3e-01
Identity = 13/53 (24.53%), Postives = 28/53 (52.83%), Query Frame = 1

Query: 152 FSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQQC 205
           + + V  +M + +   ++G+V++L +F  HVV+ + C   V I++  +    C
Sbjct: 290 YGNRVGPTMEIESKMELAGRVKVLHVFTHHVVAKSDCRVTVSIADGSVLGFHC 342

BLAST of ClCG04G006090 vs. TAIR10
Match: AT4G23930.1 (AT4G23930.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 69.3 bits (168), Expect = 3.2e-12
Identity = 46/184 (25.00%), Postives = 86/184 (46.74%), Query Frame = 1

Query: 33  SIAIVLLLVILIIILAFTV----FKAKRPITAINSVALADLDVSLNLARVAVDINVTLIA 92
           S A+  L ++ +II A TV    F+ + P  ++ SV +    V+ +       ++ T   
Sbjct: 10  SCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANS------SVSFTFSQ 69

Query: 93  DVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMADRLLKT 152
             A+ NPN+  FS+ N+   L Y G  +G   + AG I++G+ K M  T ++ +  L   
Sbjct: 70  FSAVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAA 129

Query: 153 ST--------VFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIG 205
           S+          SD    ++ + +   ++G+VR+LG+F   + +  +C   +  S+  I 
Sbjct: 130 SSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSIV 187

BLAST of ClCG04G006090 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 61.2 bits (147), Expect = 8.6e-10
Identity = 47/212 (22.17%), Postives = 93/212 (43.87%), Query Frame = 1

Query: 3   IASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAIN 62
           IA+ +     +S  S+++ S +    C+ +  A + LLV+ ++++     K K+P   + 
Sbjct: 17  IAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQ 76

Query: 63  SVALADLDVS---LNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 122
            VA+  + +S     L      +++T+       NPNKVG  Y  S+  + Y+G  +G A
Sbjct: 77  QVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRA 136

Query: 123 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGS-----MPLNTYTRISGKVRI 182
            +     DA   K  N+  TI  DR+       +D+V  +     + L     +  K+R+
Sbjct: 137 TVPGFYQDAHSTK--NVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRV 196

Query: 183 LGIFNIHVVSTTSCDFNVDISERKIGDQQCNY 207
           +   +  V  + +C   +   ++ +  +QC +
Sbjct: 197 MNFDSPGVQVSVNCGIGISPRKQALIYKQCGF 226

BLAST of ClCG04G006090 vs. NCBI nr
Match: gi|659126678|ref|XP_008463309.1| (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-98
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 1

Query: 1   MEIASSSS--VKDPKSTQSATA----RSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKA 60
           MEIASSSS  +KDPKSTQSA A    RSR+RRNTCIG+SIAI+LLL+ILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGE 120
           KRPIT +NSVALADLDVSLNLARV+VDINVTLIA +AITNPNKVGFSY NSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRI 180
           LVGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVFSDVVAGSMPLNTY RISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           LGIFNIHVVSTTSCDFNVDISERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of ClCG04G006090 vs. NCBI nr
Match: gi|449449825|ref|XP_004142665.1| (PREDICTED: uncharacterized protein LOC101208230 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 3.0e-97
Identity = 188/215 (87.44%), Postives = 203/215 (94.42%), Query Frame = 1

Query: 1   MEIASSSS--VKDPKSTQSATA---RSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAK 60
           MEIASSSS  +KDPKSTQS  A   RSR+RRNTCIG+SIAI+LLL+I+IIILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGEL 120
           RPIT +NSVALADLDVSLNLA V+VDINVTLIAD+AITNPNKVGFSY NSTAFLNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           GIFNIHVVS+TSCDFNVDISERKIGDQQCNYHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of ClCG04G006090 vs. NCBI nr
Match: gi|1009159365|ref|XP_015897772.1| (PREDICTED: uncharacterized protein LOC107431396 [Ziziphus jujuba])

HSP 1 Score: 242.7 bits (618), Expect = 5.9e-61
Identity = 118/199 (59.30%), Postives = 158/199 (79.40%), Query Frame = 1

Query: 12  PKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDV 71
           PK T+S   R+R R   C+GV +A+V++  ++I+IL+ TVFK KRP+T I++V+LAD+DV
Sbjct: 5   PKPTESGRRRNRSRA-ICLGV-MAVVVVAAVIIVILSLTVFKPKRPVTTIDAVSLADMDV 64

Query: 72  SLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQR 131
           SLN+A++AVD+NVTL  D+++ NPNKVGF Y++STAFLNYRG+ VGEA I AG I + + 
Sbjct: 65  SLNVAKLAVDLNVTLDVDLSVRNPNKVGFKYADSTAFLNYRGQTVGEASIPAGGISSDET 124

Query: 132 KEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFN 191
           K MN+TLT+MADRLL TS ++SDV+AG++P N  TRISGKV ILG+  +HVVSTTSCDFN
Sbjct: 125 KPMNLTLTVMADRLLSTSQIYSDVLAGTVPFNARTRISGKVSILGVVKVHVVSTTSCDFN 184

Query: 192 VDISERKIGDQQCNYHTKI 211
           V +S R +G Q C Y TK+
Sbjct: 185 VFVSNRSVGGQTCQYKTKL 201

BLAST of ClCG04G006090 vs. NCBI nr
Match: gi|694390601|ref|XP_009370863.1| (PREDICTED: uncharacterized protein LOC103960171 [Pyrus x bretschneideri])

HSP 1 Score: 229.2 bits (583), Expect = 6.8e-57
Identity = 112/194 (57.73%), Postives = 147/194 (75.77%), Query Frame = 1

Query: 17  SATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLA 76
           S  +RSR  RN C+  + A+VL+  I+++IL  TVFKAK P T +NSV L DLD++LN+ 
Sbjct: 10  SPPSRSRTCRNVCLAAT-AVVLVATIVLVILCLTVFKAKDPTTTVNSVVLKDLDLALNIP 69

Query: 77  RVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNI 136
           R++VD+N+TL  D+++ NPNKVGF Y NSTAFLNYRG  VGEA I +G+I A + K MN+
Sbjct: 70  RLSVDVNLTLGVDLSVNNPNKVGFKYKNSTAFLNYRGTNVGEAQIGSGKIFADRTKSMNV 129

Query: 137 TLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISE 196
           TLTIMADRLL  S +FSDVVAG++PLNT T++SG+  +LGIF IHVVST+SCDF+VD+  
Sbjct: 130 TLTIMADRLLGKSELFSDVVAGTLPLNTLTKVSGEASVLGIFKIHVVSTSSCDFSVDVGN 189

Query: 197 RKIGDQQCNYHTKI 211
             +G Q C Y  K+
Sbjct: 190 ITVGQQHCTYKIKL 202

BLAST of ClCG04G006090 vs. NCBI nr
Match: gi|657992299|ref|XP_008388400.1| (PREDICTED: uncharacterized protein LOC103450790 [Malus domestica])

HSP 1 Score: 228.8 bits (582), Expect = 8.8e-57
Identity = 115/194 (59.28%), Postives = 147/194 (75.77%), Query Frame = 1

Query: 18  ATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLAR 77
           A+ R R  RN C+  + A V +  I+++IL  TVFKAK P T +NS  L DLDVSLN+ R
Sbjct: 9   ASPRRRTCRNVCLAAT-AXVFVATIVLVILCLTVFKAKNPTTTVNSAVLKDLDVSLNIPR 68

Query: 78  VAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNIT 137
           V+VD N+TL  D+++ NPNKVGF Y NSTA LNYRG  VGEA I +G+I A Q K MN+T
Sbjct: 69  VSVDXNLTLGVDLSVKNPNKVGFKYKNSTASLNYRGTQVGEAQIGSGKISADQTKPMNVT 128

Query: 138 LTIMADRLL-KTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISE 197
           LTIMADRLL K+S +FSDV AG++PLNT+T+ISGKV +LGIF IHVVST+SCDF++D+  
Sbjct: 129 LTIMADRLLGKSSELFSDVRAGTLPLNTFTKISGKVIVLGIFKIHVVSTSSCDFSIDVGN 188

Query: 198 RKIGDQQCNYHTKI 211
           R +G Q+C + TK+
Sbjct: 189 RTVGQQRCTHKTKL 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L094_CUCSA2.1e-9787.44Uncharacterized protein OS=Cucumis sativus GN=Csa_4G337360 PE=4 SV=1[more]
A0A0L9U3N9_PHAAN1.2e-5556.54Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g067800 PE=4 SV=1[more]
W9SMP2_9ROSA4.4e-5553.13Uncharacterized protein OS=Morus notabilis GN=L484_022768 PE=4 SV=1[more]
B9IGY4_POPTR9.8e-5548.57Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s14900g PE=4 SV=2[more]
V7AQU5_PHAVU1.3e-5456.22Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G060100g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G54200.17.7e-5147.12 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G46150.12.3e-2636.50 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT1G64450.16.4e-1335.33 Glycine-rich protein family[more]
AT4G23930.13.2e-1225.00 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G01080.18.6e-1022.17 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
Match NameE-valueIdentityDescription
gi|659126678|ref|XP_008463309.1|2.1e-9888.43PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo][more]
gi|449449825|ref|XP_004142665.1|3.0e-9787.44PREDICTED: uncharacterized protein LOC101208230 [Cucumis sativus][more]
gi|1009159365|ref|XP_015897772.1|5.9e-6159.30PREDICTED: uncharacterized protein LOC107431396 [Ziziphus jujuba][more]
gi|694390601|ref|XP_009370863.1|6.8e-5757.73PREDICTED: uncharacterized protein LOC103960171 [Pyrus x bretschneideri][more]
gi|657992299|ref|XP_008388400.1|8.8e-5759.28PREDICTED: uncharacterized protein LOC103450790 [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG04G006090.1ClCG04G006090.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 89..181
score: 3.1
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 21..210
score: 3.0
NoneNo IPR availablePANTHERPTHR31852:SF43LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEINcoord: 21..210
score: 3.0
NoneNo IPR availableunknownSSF117070LEA14-likecoord: 83..148
score: 5.7