CmaCh02G014010 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAGGGCCTCAAAATGACCGAGTCGCGTGGGGAAACATGCAGTAGCTGCAACATTTCCGGCCATGCCGTTCGAAGCATGCAGCGGGTATAAGACCCAGACCCTGGATTGGTTGAAAGCCACACCGCCATTGCAACGCCGTGGAGAGCAGCCATCGTCGTCTTCGGGATTGAGTAATTCAGTTTGTGTATTAGTCTCTCTCTCCTGCGCCTCTCCGGAGAGGGAGATTAATTGTCGTCGAACACTACATACCAATAACAATGGAGGTCGTTGCTTATATTAAGGTCCCTTATGGCGTTTTAGTCGCTGTTGCTTTTGTTTTGGCTATGCTTTTCCCTGCCTCCGCCGCTGATCCTTCTTTGTCTCCAGCCCAACCTCCCATTGCTAGCGATGGTTTGTTCATTTCATTATTATTGAGAACAAATAAAAAATAAGAACATGCTAGTAATTAATTTCTATGTTTGGAAATTTGCAGGGACGAGCTTAGACCAAGGAATAGCGTACGTGCTGATGTTGTTGGCGTTGCTGCTAACTTACATTATTCATTTAGCAGAGCTTCCAATCAGTTTGTAAAATTAGTGCACAAAATGATTAAATTCAATCCCGAGAGCTCCAATGTAAAAAGGTGGGGTTTTTGTTTTCTTTTTTCTTTGCAGTTTAATGTCAATTGATGCCATGATCATTTCTTTTACCTCAATGCTCCAATGTTGAGTGGTTGGATGATGTTTTTCTAAAGAGTAAAAAAGCTTCCCAGAATAATGTATTGCTCACAAACAACAGAGATCGATCTGCTAGAAAGATTCCCAAAATAATTCTTTCAACTTCAACAAAATTTATTGGATTTGTTTGGAACTAACTCCATGAAGGAATTCAAAGGTGTCATCATTTTGATAGAATTCAGTCCCAAATAAGACAATGTCTCCTACAAATGGAAACTTCAATTGCTTCCTTCAAGTGCTCTTCTTACCACTTGGTTTTGCTCGTTCTTCATCAGCCAACGAGAACTTTTTCACTTTCTGGCGAAGGATGAAGCAACAAATTCAAGGAAAAGAAAACAACAGTTACATTTTGTTGCTTATACAGCAAATATGAATATGAATGTGAAGCAAGTGTTAAGCGTTTAAGTGAATCTATGTAATCTATGTGCCTGGAATGTTGAGGACAAAAAGTTCAAGCCAATCCGAACAAAAAATCAAATCAAGAAACCACGCGTTTGAGTATTTTAATCAGCGTTGCAGTGAGAAGTGAATTACAATTACCTGCCATATCCTAAATTGTGAAACCAAAGATCATTCCAG ATGGATGAGGGCCTCAAAATGACCGAGTCGCGTGGGGAAACATGCAGTAGCTGCAACATTTCCGGCCATGCCGTTCGAAGCATGCAGCGGTCTCTCTCTCCTGCGCCTCTCCGGAGAGGGAGATTAATTGTCGTCGAACACTACATACCAATAACAATGGAGGTCGTTGCTTATATTAAGGTCCCTTATGGCGTTTTAGTCGCTGTTGCTTTTGTTTTGGCTATGCTTTTCCCTGCCTCCGCCGCTGATCCTTCTTTGTCTCCAGCCCAACCTCCCATTGCTAGCGATGGGACGAGCTTAGACCAAGGAATAGCGTACGTGCTGATGTTGTTGGCGTTGCTGCTAACTTACATTATTCATTTAGCAGAGCTTCCAATCAGTTTGTAAAATTAGTGCACAAAATGATTAAATTCAATCCCGAGAGCTCCAATGTAAAAAGGTGTCATCATTTTGATAGAATTCAGTCCCAAATAAGACAATGTCTCCTACAAATGGAAACTTCAATTGCTTCCTTCAAGTGCTCTTCTTACCACTTGGTTTTGCTCGTTCTTCATCAGCCAACGAGAACTTTTTCACTTTCTGGCGAAGGATGAAGCAACAAATTCAAGGAAAAGAAAACAACAGTTACATTTTGTTGCTTATACAGCAAATATGAATATGAATGTGAAGCAAGTGTTAAGCGTTTAAGTGAATCTATGTAATCTATGTGCCTGGAATGTTGAGGACAAAAAGTTCAAGCCAATCCGAACAAAAAATCAAATCAAGAAACCACGCGTTTGAGTATTTTAATCAGCGTTGCAGTGAGAAGTGAATTACAATTACCTGCCATATCCTAAATTGTGAAACCAAAGATCATTCCAG ATGGATGAGGGCCTCAAAATGACCGAGTCGCGTGGGGAAACATGCAGTAGCTGCAACATTTCCGGCCATGCCGTTCGAAGCATGCAGCGGTCTCTCTCTCCTGCGCCTCTCCGGAGAGGGAGATTAATTGTCGTCGAACACTACATACCAATAACAATGGAGGTCGTTGCTTATATTAAGGTCCCTTATGGCGTTTTAGTCGCTGTTGCTTTTGTTTTGGCTATGCTTTTCCCTGCCTCCGCCGCTGATCCTTCTTTGTCTCCAGCCCAACCTCCCATTGCTAGCGATGGGACGAGCTTAGACCAAGGAATAGCGTACGTGCTGATGTTGTTGGCGTTGCTGCTAACTTACATTATTCATTTAGCAGAGCTTCCAATCAGTTTGTAA MDEGLKMTESRGETCSSCNISGHAVRSMQRSLSPAPLRRGRLIVVEHYIPITMEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
BLAST of CmaCh02G014010 vs. Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.6e-06 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TrEMBL
Match: A0A0A0KK44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G151510 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.4e-10 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TrEMBL
Match: W9RQA8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012077 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.0e-06 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TrEMBL
Match: A0A124SBV6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_006148 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-06 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TrEMBL
Match: A0A118JTN1_CYNCS (Arabinogalactan peptide, AGP OS=Cynara cardunculus var. scolymus GN=Ccrd_007988 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-06 Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TrEMBL
Match: A0A0V0H965_SOLCH (Putative arabinogalactan peptide 22-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-06 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TAIR10
Match: AT5G24105.1 (AT5G24105.1 arabinogalactan protein 41) HSP 1 Score: 52.8 bits (125), Expect = 1.9e-07 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TAIR10
Match: AT3G61640.1 (AT3G61640.1 arabinogalactan protein 20) HSP 1 Score: 52.0 bits (123), Expect = 3.2e-07 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TAIR10
Match: AT5G53250.1 (AT5G53250.1 arabinogalactan protein 22) HSP 1 Score: 49.3 bits (116), Expect = 2.1e-06 Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
BLAST of CmaCh02G014010 vs. TAIR10
Match: AT2G46330.1 (AT2G46330.1 arabinogalactan protein 16) HSP 1 Score: 48.9 bits (115), Expect = 2.7e-06 Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 1
BLAST of CmaCh02G014010 vs. NCBI nr
Match: gi|659074005|ref|XP_008437371.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]) HSP 1 Score: 72.8 bits (177), Expect = 4.9e-10 Identity = 50/77 (64.94%), Postives = 57/77 (74.03%), Query Frame = 1
BLAST of CmaCh02G014010 vs. NCBI nr
Match: gi|449452418|ref|XP_004143956.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis sativus]) HSP 1 Score: 72.8 bits (177), Expect = 4.9e-10 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 1
BLAST of CmaCh02G014010 vs. NCBI nr
Match: gi|697188027|ref|XP_009603048.1| (PREDICTED: arabinogalactan peptide 22-like [Nicotiana tomentosiformis]) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1
BLAST of CmaCh02G014010 vs. NCBI nr
Match: gi|703131893|ref|XP_010104993.1| (hypothetical protein L484_012077 [Morus notabilis]) HSP 1 Score: 59.7 bits (143), Expect = 4.3e-06 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 1
BLAST of CmaCh02G014010 vs. NCBI nr
Match: gi|698532993|ref|XP_009763316.1| (PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris]) HSP 1 Score: 59.7 bits (143), Expect = 4.3e-06 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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