CmaCh01G005240 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTGTAGAGGTTAATTTTAGAAGAAAAAGATGAACACAAATGGGGTAAGCCCAACTAAGAACCAAACTAACAAAACAAAGGAGTTGGTATTGTGAGGGTACCTACCAATATCATATAATTTATTGTAAATATTAAATCCCAATCACCAATTTAGTAAAAAAAATTTAAGGATATTAATAAAACTATTGAAAGCATCCCGGGAGCAAAATCAAGTCTATGCGTGTAATATTGAAAAGGACTCAAAATGTACGGTAGGAGACATGGTGTCAACTCTCCACCACTTTTGAGCATTGTAATCTAAGCGAGCTACCCTGTGATACATGTGTGTGTCATAGTGACGGCGAGCGTGCTGAAACGAGTGTCTCGAGCGACTTCCTTTGAAATGGGTTTTTCAAGAACAGTACCGGGCAACACGGGTGTGCCAATATTGCGCCTTAGCCTGCGTGTCGGTATGCACCCACTATCCAATACGGTATCCGTACATGATATGACATGGGCATAGGAGGACCAATGTATCGATAGAATTCAGATGGATGGATGTTCGGGATGTCTCGATGAAATGAGCGATACGTGGGTCCGTTCTCGATGACATGACCCATTGAGTTGTGATGACTGACGACACCTCAAGACTTGGAATGACGTCAAGACATGAGTCATGTCAATCGGGAACTAAGATGACAAGATGAGATACGATATTGCATTGAGAGATCTTAACCCAGAAGCAAAGGCGAGTCAAATGACTTGGTTTAGTGGAGAGGCAAATTAGTTTTGCAACATAAGTATGTTAATTTCATCTCTGTTCTTCTATCACTTCTATTATGGGGTTCTTGGGGGAGCAATCTTGTAGATTTTCTTCACTGTATTTCTTCCAATTCCTCAAATCCAAATCCAACCCTCTTTTACACTCAATCTTCATCCTCCTACTCCTCTGTTCTAAATTTCACCATTCGAAACCTCAGATTCTCAGGGCCCAATGTCCCTAAGCCAATCGCCATAATCAAACCATCGCAACCTTCCCAAGTTCAAGCAGCCGTCATATGCTGCAACAATCACGACCTCCGCATCCGAGTCCGCAGCGGCGGCCATGACTTCAAGGGTCTTTCTTACGTTGCCAATGTCACATTCGTGGTGATTGATTTGGTCAATCTTAATTAAGCGACGGTGGACATTGAAAACAACACTGCGTGGGTTCAATCTGGGGCGACCCAAGGTGAGGTGTATTACAAACTTGGCCTAAAAACCTCTGCTTTTGGTTTCCCCGGCGGAGTGCAGCCGACTGTGGGAATTGGTGGGTTCCTCAGCGGCGGTGGGTATGGGATGATGGTTAGAAGATATGGGCTTGGTGCAGACAATGTGGTGAATGCTCTACTTGTGGACGCTAATGGGAGGCTTCTTGATAGAGATTCTATGGGGGAGGATTTGTTTTGGGCCATTAGAGGCGGCGGAGGAGGCAGCTTTGGGATTGTCTTGGCATGGAAGTTGAAGTTGGTTCCTGATATGGAAAAATCGCTCGAGAGTAAGATTAGAATTACCTTATTGATTAAATATCTCAAGACAAGAACATTGTTTGAGATTCGAATCACTGGACAAGCAAGATCGATCCTGTCTAGCTTGAATGATTCTTGTTGATCAAATATCTCAACGCAAAAACACTTGTTTGAGATTCAAACCACTCAACAAGCAAGATTGATCATGTCGAGCTTCAATGATTCTACATGCAACCTAAACTACATAGAATTGTAAACAAACTAAGTCATTAGCTAAAGAAACACAAAGTCTCTTTTTACTGTATTTTCCAAATTCACTTAAAAAAAACATACCATTCTTTATATAGCCTCAAAAATGAAACTACTACATTCCAAGGATTTAACATTCATATTTATGACCATAATTAGCCGGGTGTAAATGTAATCTAGAGTAAATAAAAAGTCTTCAAATACAATAACTCTAAACGGTAACCACCCAAAATTTATAACAATCAAACTTCATTCTTCTTCAATATGGCATGAATTGAAACATCTTTTGATAATTTTGACAGTCTTTTCTTCACATCTTCATGGAAGTATATTGCATGATTGATATCTTTTAGTTCATATCAGTTCCGGTTCCTCCTACTGTTACGTCCTTCGTGGCTTATAGAAGTTTGGACCAAAACACTACCGACTTGGTTCATCGATGGCAGTTCGTTGCTCCGGTGATTGATGAAAGATTGTTCATTGGGTCATGACTCTCTACCATGAATAATATCAATGGAGATGTATTGCTTAGTTATAAACCAATGATTAACCCCTTAATTAGTAGATGTGAGACTTCTCTCTCGGGCCCGAGGAAGTCCTTGAACAAAGTACACCATTTGTTCACACTTAGTCACTTTTGACTACACCTTCGAAGCTTATAAACCCATGATCAACCCATTATTTAGTAGATGTAGGACTCCTCTCTAGGGCCTATGGAGCCCTCGAATAAAGTATACTACACCATTTGTTCAACACTTAAGTCACTTTTGACTATACATTCGAGGCTTATAAATCCATGATCATCCCCTTAATTAGTAGATGTGGGACTCCTCTCTAGGGCGGATCCCTCGAACAAAGTAGTACACCCTTTGTTCGACACTTGAGGATTCTACTGAAATGACTAAGTTAAGGGCATGACTTTGATACCATATTAGAAACCACGACTCTCCATAATGGTATGATATTGTCCATTTTGAGCACAAGGACTCGTATCAATGGAGATATATTTCTTACTTATAAACTCGTGATCATTCCATTAATTAGCCAACGTGGGACTCCCTCCCAGCAATCCTCAACACTCTTTCCATGTCTCGCCCACGAACATTTTTACGTGGTTTGAAAGTTCGAAAGTTAGGAGATTTAAATAGAAGAATGCAATTTCTTTTCACAGCTGCAAATTCAATGGAAGGAGGAGGAAGAACAAAGGGAGCATTTTTCTACTCACTGTTTCTAGGAAAGGCAGAGGAGCTTGTACCCATCATGGAGAAGAGCTTCCCAGAGCTGGGACTGAAAAAAGAAGACTGTTTGGAAACCAATTGGGTTGAATCAACGGCATATCCCGCAAGTGGGTTTGTGACAGCAAACGATTTGAATGTCTTACTTGACAGAGCCCCACTCAGCAGCGGCCGATACAAAACCAAATCAGATTACATCACACAACCCATCTCAGAACCCGCCCTCGACGGCATATGGGAAAGGTTGGACGCCGATGGCATAGAGACAGTGCAGCTCGTGCTGATCCGCTACGGAGGGAAAATGAATGAGATATCTGAAACAGAGCTCCCTTCGCCGCATCGAGCAGGGTATCCCATAAAAATTGGCTACTATGTTACATGGGAATCCCCTGAAGCTGACATGAGGCACTTGGAATGGAGCCGAGAGGTGTATGAGTACATGGCTCCTTTCGTGTCCAAATGGCCCAGATCTGCGTATGTCAATTACAGAGACCTTGACATTGGGACAAACAACGAGGACGGGACCCCGACGAGCTTCGAGGAAGCAAGTGTTTGGGGATTAATTTTGAGAGGTTGGTGCGAGTGA ATGGTTTGTAGAGATTTTCTTCACTGTATTTCTTCCAATTCCTCAAATCCAAATCCAACCCTCTTTTACACTCAATCTTCATCCTCCTACTCCTCTGTTCTAAATTTCACCATTCGAAACCTCAGATTCTCAGGGCCCAATGTCCCTAAGCCAATCGCCATAATCAAACCATCGCAACCTTCCCAAGTTCAAGCAGCCGTCATATGCTGCAACAATCACGACCTCCGCATCCGAGTCCGCAGCGGCGGCCATGACTTCAAGGCGACGGTGGACATTGAAAACAACACTGCGTGGGTTCAATCTGGGGCGACCCAAGGTGAGGTGTATTACAAACTTGGCCTAAAAACCTCTGCTTTTGGTTTCCCCGGCGGAGTGCAGCCGACTGTGGGAATTGGTGGGTTCCTCAGCGGCGGTGGGTATGGGATGATGGTTAGAAGATATGGGCTTGCTGCAAATTCAATGGAAGGAGGAGGAAGAACAAAGGGAGCATTTTTCTACTCACTGTTTCTAGGAAAGGCAGAGGAGCTTGTACCCATCATGGAGAAGAGCTTCCCAGAGCTGGGACTGAAAAAAGAAGACTGTTTGGAAACCAATTGGGTTGAATCAACGGCATATCCCGCAAGTGGGTTTGTGACAGCAAACGATTTGAATGTCTTACTTGACAGAGCCCCACTCAGCAGCGGCCGATACAAAACCAAATCAGATTACATCACACAACCCATCTCAGAACCCGCCCTCGACGGCATATGGGAAAGGTTGGACGCCGATGGCATAGAGACAGTGCAGCTCGTGCTGATCCGCTACGGAGGGAAAATGAATGAGATATCTGAAACAGAGCTCCCTTCGCCGCATCGAGCAGGGTATCCCATAAAAATTGGCTACTATGTTACATGGGAATCCCCTGAAGCTGACATGAGGCACTTGGAATGGAGCCGAGAGGTGTATGAGTACATGGCTCCTTTCGTGTCCAAATGGCCCAGATCTGCGTATGTCAATTACAGAGACCTTGACATTGGGACAAACAACGAGGACGGGACCCCGACGAGCTTCGAGGAAGCAAGTGTTTGGGGATTAATTTTGAGAGGTTGGTGCGAGTGA ATGGTTTGTAGAGATTTTCTTCACTGTATTTCTTCCAATTCCTCAAATCCAAATCCAACCCTCTTTTACACTCAATCTTCATCCTCCTACTCCTCTGTTCTAAATTTCACCATTCGAAACCTCAGATTCTCAGGGCCCAATGTCCCTAAGCCAATCGCCATAATCAAACCATCGCAACCTTCCCAAGTTCAAGCAGCCGTCATATGCTGCAACAATCACGACCTCCGCATCCGAGTCCGCAGCGGCGGCCATGACTTCAAGGCGACGGTGGACATTGAAAACAACACTGCGTGGGTTCAATCTGGGGCGACCCAAGGTGAGGTGTATTACAAACTTGGCCTAAAAACCTCTGCTTTTGGTTTCCCCGGCGGAGTGCAGCCGACTGTGGGAATTGGTGGGTTCCTCAGCGGCGGTGGGTATGGGATGATGGTTAGAAGATATGGGCTTGCTGCAAATTCAATGGAAGGAGGAGGAAGAACAAAGGGAGCATTTTTCTACTCACTGTTTCTAGGAAAGGCAGAGGAGCTTGTACCCATCATGGAGAAGAGCTTCCCAGAGCTGGGACTGAAAAAAGAAGACTGTTTGGAAACCAATTGGGTTGAATCAACGGCATATCCCGCAAGTGGGTTTGTGACAGCAAACGATTTGAATGTCTTACTTGACAGAGCCCCACTCAGCAGCGGCCGATACAAAACCAAATCAGATTACATCACACAACCCATCTCAGAACCCGCCCTCGACGGCATATGGGAAAGGTTGGACGCCGATGGCATAGAGACAGTGCAGCTCGTGCTGATCCGCTACGGAGGGAAAATGAATGAGATATCTGAAACAGAGCTCCCTTCGCCGCATCGAGCAGGGTATCCCATAAAAATTGGCTACTATGTTACATGGGAATCCCCTGAAGCTGACATGAGGCACTTGGAATGGAGCCGAGAGGTGTATGAGTACATGGCTCCTTTCGTGTCCAAATGGCCCAGATCTGCGTATGTCAATTACAGAGACCTTGACATTGGGACAAACAACGAGGACGGGACCCCGACGAGCTTCGAGGAAGCAAGTGTTTGGGGATTAATTTTGAGAGGTTGGTGCGAGTGA MVCRDFLHCISSNSSNPNPTLFYTQSSSSYSSVLNFTIRNLRFSGPNVPKPIAIIKPSQPSQVQAAVICCNNHDLRIRVRSGGHDFKATVDIENNTAWVQSGATQGEVYYKLGLKTSAFGFPGGVQPTVGIGGFLSGGGYGMMVRRYGLAANSMEGGGRTKGAFFYSLFLGKAEELVPIMEKSFPELGLKKEDCLETNWVESTAYPASGFVTANDLNVLLDRAPLSSGRYKTKSDYITQPISEPALDGIWERLDADGIETVQLVLIRYGGKMNEISETELPSPHRAGYPIKIGYYVTWESPEADMRHLEWSREVYEYMAPFVSKWPRSAYVNYRDLDIGTNNEDGTPTSFEEASVWGLILRGWCE
BLAST of CmaCh01G005240 vs. Swiss-Prot
Match: CBDAS_CANSA (Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.5e-43 Identity = 90/223 (40.36%), Postives = 134/223 (60.09%), Query Frame = 1
BLAST of CmaCh01G005240 vs. Swiss-Prot
Match: THCAI_CANSA (Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.3e-42 Identity = 89/223 (39.91%), Postives = 132/223 (59.19%), Query Frame = 1
BLAST of CmaCh01G005240 vs. Swiss-Prot
Match: THCAS_CANSA (Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.7e-42 Identity = 87/223 (39.01%), Postives = 131/223 (58.74%), Query Frame = 1
BLAST of CmaCh01G005240 vs. Swiss-Prot
Match: CASL2_CANSA (Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.8e-41 Identity = 85/216 (39.35%), Postives = 128/216 (59.26%), Query Frame = 1
BLAST of CmaCh01G005240 vs. Swiss-Prot
Match: CASL1_CANSA (Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.2e-40 Identity = 84/216 (38.89%), Postives = 127/216 (58.80%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TrEMBL
Match: A0A151RZI8_CAJCA (Reticuline oxidase-like protein OS=Cajanus cajan GN=KK1_030436 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 1.1e-80 Identity = 177/436 (40.60%), Postives = 241/436 (55.28%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TrEMBL
Match: A0A151S4C8_CAJCA (Reticuline oxidase-like protein OS=Cajanus cajan GN=KK1_028595 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 2.4e-80 Identity = 175/431 (40.60%), Postives = 237/431 (54.99%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TrEMBL
Match: A0A0A0LS77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G096090 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.5e-79 Identity = 136/195 (69.74%), Postives = 165/195 (84.62%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TrEMBL
Match: M5WQ23_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021171mg PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.6e-76 Identity = 160/386 (41.45%), Postives = 231/386 (59.84%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TrEMBL
Match: A0A067KWX9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09769 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.4e-72 Identity = 159/379 (41.95%), Postives = 217/379 (57.26%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TAIR10
Match: AT5G44400.1 (AT5G44400.1 FAD-binding Berberine family protein) HSP 1 Score: 176.0 bits (445), Expect = 4.2e-44 Identity = 90/204 (44.12%), Postives = 127/204 (62.25%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TAIR10
Match: AT1G30760.1 (AT1G30760.1 FAD-binding Berberine family protein) HSP 1 Score: 168.3 bits (425), Expect = 8.7e-42 Identity = 85/200 (42.50%), Postives = 120/200 (60.00%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TAIR10
Match: AT2G34790.1 (AT2G34790.1 FAD-binding Berberine family protein) HSP 1 Score: 168.3 bits (425), Expect = 8.7e-42 Identity = 89/210 (42.38%), Postives = 126/210 (60.00%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TAIR10
Match: AT4G20860.1 (AT4G20860.1 FAD-binding Berberine family protein) HSP 1 Score: 166.0 bits (419), Expect = 4.3e-41 Identity = 87/210 (41.43%), Postives = 128/210 (60.95%), Query Frame = 1
BLAST of CmaCh01G005240 vs. TAIR10
Match: AT5G44380.1 (AT5G44380.1 FAD-binding Berberine family protein) HSP 1 Score: 164.9 bits (416), Expect = 9.6e-41 Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 1
BLAST of CmaCh01G005240 vs. NCBI nr
Match: gi|449459146|ref|XP_004147307.1| (PREDICTED: cannabidiolic acid synthase-like [Cucumis sativus]) HSP 1 Score: 310.8 bits (795), Expect = 3.1e-81 Identity = 140/206 (67.96%), Postives = 171/206 (83.01%), Query Frame = 1
BLAST of CmaCh01G005240 vs. NCBI nr
Match: gi|1012336654|gb|KYP47949.1| (Reticuline oxidase-like protein [Cajanus cajan]) HSP 1 Score: 308.5 bits (789), Expect = 1.5e-80 Identity = 177/436 (40.60%), Postives = 241/436 (55.28%), Query Frame = 1
BLAST of CmaCh01G005240 vs. NCBI nr
Match: gi|1012338370|gb|KYP49624.1| (Reticuline oxidase-like protein [Cajanus cajan]) HSP 1 Score: 307.4 bits (786), Expect = 3.4e-80 Identity = 175/431 (40.60%), Postives = 237/431 (54.99%), Query Frame = 1
BLAST of CmaCh01G005240 vs. NCBI nr
Match: gi|802609643|ref|XP_012074138.1| (PREDICTED: cannabidiolic acid synthase-like 1 [Jatropha curcas]) HSP 1 Score: 306.2 bits (783), Expect = 7.6e-80 Identity = 174/418 (41.63%), Postives = 235/418 (56.22%), Query Frame = 1
BLAST of CmaCh01G005240 vs. NCBI nr
Match: gi|700209679|gb|KGN64775.1| (hypothetical protein Csa_1G096090 [Cucumis sativus]) HSP 1 Score: 304.7 bits (779), Expect = 2.2e-79 Identity = 136/195 (69.74%), Postives = 165/195 (84.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|