CmaCh01G004810 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G004810
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_11
Location	Cma_Chr01 : 2437137 .. 2440535 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCGCGTGAAGGAAAGAATTGGCAAAAGAAAAAGGAAATTAAAGAGTGAAACGCAAACCTCAGGAAATCCCATTCTTCTCGTCTTCCATCCCCGGCTTTGCCTCTCTGCACTCGCGCCGTTTTTTTCTGCTCCGTTCTTCGGCCTCAAAATCCTCTCAATCCCAACGCCATTTATCAAAAATTCCAATTCCAAATCCAATTCCAGTTCCAAATTCTTCCATCGCCATCGCCATCGCCATCGCCATCGCCATCGCCATGATCCTCCTCCTCGCTTTCCTCCTCTTCTTTGCCTCTCCTCTCATGGCCGCTTCTGACCCATCCACCATCTACGACCATCTCCACCTTCACGGCCTCCCCATCGGCCTCCTTCCCAAGGACATCACCAGATTCTCCATCGACTCTTCCACTGGCCGATTCCAGGTCTTCCTCGACCAGCCCTGCAATGCTAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGTCGCCTCAGCTATGGCCAGATCGCTGAATTGGCTGGAATTTCCTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAAGGAATTCACGTCGATTTGTCCTCTTCTGGTTTAATTCATTTTGACGTCGGCGTTGTTGACAAGCAATTCTCCCTGTCTCTCTTTGAGTCCCCGCCTGATTGCACTGCCGCTGATCCTGTTGATCATTCCTTCGAGTTGAATGGAGCCTCTGTCGATTTGAATGTGGCTATTTCTATGGTACGTTTCAGCTACTGTTTTCGTTCGTTTATCATCTATATTTACTCGTTTCGAATTCGTGTTTATGGTGCAAAAGTAGTTACTATGATGCTTGCTTATGTCTTTGGTTGAATTTTTGCGTTGTTTTTGGGAAATATTGTTGTCTATTATGTATCAGCAGGCATTGGGGTATTATAATTCACATGTAGTTATCATCACGATAATTCTATGTGCTGATTTACCTTGTTATGTTGTAACGATTCCCTGTTTTCAAATCTTATAGAATGATCTGGTTAAAAAATATTACTTCTTTTTAATTCATTGCTTTGTTACCTTCTTGTCGACATTTAGCGTTAGGTTAATGGTTTGGGGTCGAAAAATGATCAAAATGTAGGAGTTGTGTGTTAAGTTTGTGATAGAATTTTAAGTTGTAGAGACATGGCTATGGAGTGAATCATTTGGGCATTGAATTAATGCTTCTTCTAAGAAAAAGAATGTTTAATGCGGTGGTATAGTTCGTCGTGCCATATCATAATAATATTATCGCCGTGTTCGTTCGAGCGAGTGATGGGTGTGGATGGCTTTAGGAATTTTGAATGGATGTTCATGTCCATTACTGCAAGTAGCAAAGATTGAGACTGATTAAGGCCTTGTGTGTTGATATTAATAGGATCATCCAAGTTGTAATTCATAACTTTATGATCTTTCTTTTAGTTACAATGTATTTTCTTTTGATTTATGGTCGCTAGGCTCTTGTTTTTCTATTTGTCATAATTTTGCATTATATTTTGGAATTCTTCATAATGTAGTCATATGTTCTTAATTAAGAGGTTGTTTCTTTGGATTGTCATATAATTTCAGAGTGAAGCACAGAACCTTCAGCTTGAGGACAGGGAACTGCGGGCAGCATCATAGATTACCAATACAAGAAACGTTACGGATTTCCCGAGGCTTTCATTCAAGAGTCTGCCTTTGCTGGTCTGGTAAATTTGTTTCTGCTATTTGTGGATTGCTTTTGTTTTGTATAGTCTTTGTTTCCTAATAGTCCTGTCTTATGGGGATAAGGAGGCTATTATATATTCATATAAAGAGCTCACAGAAATACTTAGCCTCCAATCCTTTAAGTCTATACTATTATTATCTGAATTTAAGCGAGGGAGATTGTTGCTTGGGTCGGCTTATAAGAATCCTAGAAGTCATGTCTGGTATAAGTTTAGCAGTCGTCTTGTCTGTTGTAAGTGCTTTTTATATCTCTTTATGAAGTATATCACTGCTTCTGGCTGTGGTTGGCATTGGCTACTCACAAAAAGAAGTTTTGTTTTGTTGTGTTGCCTCTATAGCCATAAAGTGTGGGCTTGTAAATTGTACATTGCAAAAGTGTTATTTTAGTAGCTAAAAGAGGATTTACATGTATTTTATTATCATGAAGCTTAGGAATATTTAGTATCCTAATCGGAATATACTTTTGTAGGAAAAAATGAACTGGAGTTCTATTCAGGATAAGAGTCATTCGAATCCTTTAAATTGTCCGGACGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTAACGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTAACGTCATTTACTGTCATCGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATCGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATCGTCTTCGATTAGATAATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTCAATTGCTTTAGTAAACTACTAACTATGCTTCAAAGACAGCAATCTCATTATAGATAGTCATTTCAAACGTCTTGGGTTCTTTTCTTGTCCTCAAAACTCTTGTACCTTTCCTTCCCAGTCTTAAAGATGATTCTTCTAAAGTGGATATCATAGTTACAAACTCTTGTACATTTCAAACGTCTTGGGAAGTTTTTTGAGTTCCATTGGGATGGGCTTTACGTGCTTTTTAAGGTTAAATTACAAGTTTAGGTTTGAAACGTTTCGAATTCATGTTTATTTGGTATTTGAATTTTACTAGTTGTGTAATAGGTTTATGAACTTATGAACGTTGAAAATACGTTTTTGGTCCCTATTGTTTGGTACTTTTTCAATTTGATCACAAGTGTTTAAATAGTTTTAATTTAGTCCATTATGTTTTTTCAATTACTTAACTCAATTAGTGTCGATGTTCGTTAATTCTAATAATATTCCACAATAAGCATAAGAATGTTAGAAACATAAAAGGACCAAATTGAAAAAACGTTAAAACCTAGTTGCATTTTATATTTATTTTAATAAATATGCTAGAGAATAATAATTTCTAG

mRNA sequence

ATGAAGCGCGTGAAGGAAAGAATTGGCAAAAGAAAAAGGAAATTAAAGATTCCAAATTCTTCCATCGCCATCGCCATCGCCATCGCCATCGCCATCGCCATGATCCTCCTCCTCGCTTTCCTCCTCTTCTTTGCCTCTCCTCTCATGGCCGCTTCTGACCCATCCACCATCTACGACCATCTCCACCTTCACGGCCTCCCCATCGGCCTCCTTCCCAAGGACATCACCAGATTCTCCATCGACTCTTCCACTGGCCGATTCCAGGTCTTCCTCGACCAGCCCTGCAATGCTAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGTCGCCTCAGCTATGGCCAGATCGCTGAATTGGCTGGAATTTCCTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAAGGAATTCACGTCGATTTGTCCTCTTCTGGTTTAATTCATTTTGACGTCGGCGTTGTTGACAAGCAATTCTCCCTGTCTCTCTTTGAGTCCCCGCCTGATTGCACTGCCGCTGATCCTGTTGATCATTCCTTCGAGTTGAATGGAGCCTCTGTCGATTTGAATGTGGCTATTTCTATGAGACATGGCTATGGAGTGAATCATTTGGGCATTGAATTAATGCTTCTTCTAAGAAAAAGAATAGTGAAGCACAGAACCTTCAGCTTGAGGACAGGGAACTGCGGGCAGCATCATAGATTACCAATACAAGAAACGTTACGGATTTCCCGAGGCTTTCATTCAAGAGTCTGCCTTTGCTGGTCTGAGAATAATAATTTCTAG

Coding sequence (CDS)

ATGAAGCGCGTGAAGGAAAGAATTGGCAAAAGAAAAAGGAAATTAAAGATTCCAAATTCTTCCATCGCCATCGCCATCGCCATCGCCATCGCCATCGCCATGATCCTCCTCCTCGCTTTCCTCCTCTTCTTTGCCTCTCCTCTCATGGCCGCTTCTGACCCATCCACCATCTACGACCATCTCCACCTTCACGGCCTCCCCATCGGCCTCCTTCCCAAGGACATCACCAGATTCTCCATCGACTCTTCCACTGGCCGATTCCAGGTCTTCCTCGACCAGCCCTGCAATGCTAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGTCGCCTCAGCTATGGCCAGATCGCTGAATTGGCTGGAATTTCCTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAAGGAATTCACGTCGATTTGTCCTCTTCTGGTTTAATTCATTTTGACGTCGGCGTTGTTGACAAGCAATTCTCCCTGTCTCTCTTTGAGTCCCCGCCTGATTGCACTGCCGCTGATCCTGTTGATCATTCCTTCGAGTTGAATGGAGCCTCTGTCGATTTGAATGTGGCTATTTCTATGAGACATGGCTATGGAGTGAATCATTTGGGCATTGAATTAATGCTTCTTCTAAGAAAAAGAATAGTGAAGCACAGAACCTTCAGCTTGAGGACAGGGAACTGCGGGCAGCATCATAGATTACCAATACAAGAAACGTTACGGATTTCCCGAGGCTTTCATTCAAGAGTCTGCCTTTGCTGGTCTGAGAATAATAATTTCTAG

Protein sequence

MKRVKERIGKRKRKLKIPNSSIAIAIAIAIAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMRHGYGVNHLGIELMLLLRKRIVKHRTFSLRTGNCGQHHRLPIQETLRISRGFHSRVCLCWSENNNF

Homology

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BLAST of CmaCh01G004810 vs. TrEMBL
Match: A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.5e-71
Identity = 133/156 (85.26%), Postives = 143/156 (91.67%), Query Frame = 1


Query: 41  LLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKFE 100
           L FFASP + ASDPSTIYDHLHL+GLPIGLLPK+IT+FSIDSSTGRFQVFLDQPCNAKFE
Sbjct: 36  LFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTGRFQVFLDQPCNAKFE 95

Query: 101 NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFS 160
           NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGI VDLS+SGLIHFDVGVVDKQFS
Sbjct: 96  NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFS 155

Query: 161 LSLFESPPDCTAADPVDHSFELNGASVDLNVAISMR 197
           LSLFESP DCTAADPVD S   N AS+D++  +S +
Sbjct: 156 LSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTK 191

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BLAST of CmaCh01G004810 vs. TrEMBL
Match: W9S3W1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 101/141 (71.63%), Postives = 116/141 (82.27%), Query Frame = 1


Query: 35  ILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQP 94
           +  L  +LF A+    A+ P+TIYD+L LH LPIGL PK IT FS D STG FQV L+QP
Sbjct: 25  LFALLLILFAAASAALAAAPTTIYDYLRLHDLPIGLFPKGITEFSHDPSTGYFQVLLNQP 84

Query: 95  CNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGV 154
           CNAKFEN+VHYDFNVSG LS+GQI  L+G+++QELFLWFPVKGI VD+ SSGLI+FDVGV
Sbjct: 85  CNAKFENQVHYDFNVSGTLSFGQIGNLSGVTAQELFLWFPVKGIRVDVPSSGLIYFDVGV 144

Query: 155 VDKQFSLSLFESPPDCTAADP 176
           VDKQFSLSLFESPPDCTA DP
Sbjct: 145 VDKQFSLSLFESPPDCTAVDP 165

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BLAST of CmaCh01G004810 vs. TrEMBL
Match: A0A067K3P8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.4e-50
Identity = 106/167 (63.47%), Postives = 130/167 (77.84%), Query Frame = 1


Query: 18  PNSSIAIAIAIAIAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITR 77
           P++S+    A  ++I  +L L   L    PL AAS  S+IYDHL L+GLPIGLLP+ IT 
Sbjct: 4   PSNSVTFLHAPTLSITFLLFLTCHL----PLSAASQ-SSIYDHLRLNGLPIGLLPQGITD 63

Query: 78  FSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKG 137
           FS+D++TG FQV L QPCNAKFEN++HYDFN+SG LS+G+I EL+G+S QELFLWFPVKG
Sbjct: 64  FSLDATTGHFQVNLTQPCNAKFENQLHYDFNISGLLSFGKIGELSGVSQQELFLWFPVKG 123

Query: 138 IHVDLSSSGLIHFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNG 185
           I VD+ SSGLI+FDVGVVDKQFSLSLFE+P +CTAADP D   +  G
Sbjct: 124 IRVDVPSSGLIYFDVGVVDKQFSLSLFENPTECTAADPGDRPVDSPG 165

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BLAST of CmaCh01G004810 vs. TrEMBL
Match: M5W029_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011321mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.5e-48
Identity = 96/151 (63.58%), Postives = 120/151 (79.47%), Query Frame = 1


Query: 30  IAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQV 89
           + I  ++++  +L   +   A S  S+IYDHL   GLP+G+LPK IT +S++ STG F+V
Sbjct: 25  VLILFLVVVVVVLPLPTTATAVSPSSSIYDHLRQQGLPMGILPKGITEYSLNGSTGEFRV 84

Query: 90  FLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIH 149
            L QPC+AKFEN+V YDFNVSG LS+G+IA L+G+S+QELFLWFPVKGI VD+ SSGLI+
Sbjct: 85  LLAQPCHAKFENQVLYDFNVSGVLSFGRIANLSGVSAQELFLWFPVKGIRVDVPSSGLIY 144

Query: 150 FDVGVVDKQFSLSLFESPPDCTAADPVDHSF 181
           FDVGVVDKQFSLSLFESPPDCTA DP D +F
Sbjct: 145 FDVGVVDKQFSLSLFESPPDCTAVDPSDPNF 175

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BLAST of CmaCh01G004810 vs. TrEMBL
Match: A0A061EYN1_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.1e-46
Identity = 97/142 (68.31%), Postives = 110/142 (77.46%), Query Frame = 1


Query: 36  LLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPC 95
           L L FL    S   A S PS+IYDHL  +GLP+GLLPK IT FSID  T RFQV L +PC
Sbjct: 12  LSLTFLFISLSFPTAQSSPSSIYDHLERNGLPMGLLPKGITEFSIDPETHRFQVNLTEPC 71

Query: 96  NAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVV 155
           NAKFEN++HYDF +SG LS+G+IA L+G++ QELFLWFPV  I VD  SSGLI+FDVGVV
Sbjct: 72  NAKFENQLHYDFIISGVLSFGKIANLSGVTQQELFLWFPVISIRVDDPSSGLINFDVGVV 131

Query: 156 DKQFSLSLFESPPDCTAADPVD 178
           DKQFSLSLFESP DCTA DP D
Sbjct: 132 DKQFSLSLFESPRDCTAVDPDD 153

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BLAST of CmaCh01G004810 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42
Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = 1


Query: 34  MILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQ 93
           +I+L + +LF    L +  DPS  YD+L    LP G++PK +T FSID  TGRF V L  
Sbjct: 11  IIVLFSSILF--PQLSSLPDPS-FYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPV 70

Query: 94  PCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVG 153
           PC+AKFEN+ H+D+N+SG LS G+I  L+G++ +ELFLWF VKGIHVD  SSGLIHFDVG
Sbjct: 71  PCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVG 130

Query: 154 VVDKQFSLSLFESPPDCTAADPVDHSFELN 184
           V DKQ SLSLFESP DCTAA+    + +L+
Sbjct: 131 VADKQLSLSLFESPRDCTAAESQPRAVDLS 157

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BLAST of CmaCh01G004810 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538)

HSP 1 Score: 161.4 bits (407), Expect = 7.6e-40
Identity = 84/164 (51.22%), Postives = 112/164 (68.29%), Query Frame = 1


Query: 28  IAIAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRF 87
           + IA   ++L+A +    S   A S+  TIY+ L  +GLP G+ PK +  F+ D  TGRF
Sbjct: 6   VQIAFLCLVLVAGI----SISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRF 65

Query: 88  QVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGL 147
            V+L+Q C AK+E E+HYD N++G +   QI++L+GIS+QELFLWFPVKGI VD+ SSGL
Sbjct: 66  SVYLNQACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGL 125

Query: 148 IHFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNV 192
           I+FDVGVV KQ+SLSLFE+P DC     + H  EL    VD N+
Sbjct: 126 IYFDVGVVRKQYSLSLFETPRDCVPVRGI-HKVELPLYRVDQNL 164

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BLAST of CmaCh01G004810 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 154.5 bits (389), Expect = 9.3e-38
Identity = 99/234 (42.31%), Postives = 137/234 (58.55%), Query Frame = 1


Query: 30  IAIAMILLLAFLLFFASPLMAA-SDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQ 89
           + I  I LL F+L     + A  ++  +I + L  +GLP+GL PK +  F+++  TGRF 
Sbjct: 2   LRIVQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFS 61

Query: 90  VFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLI 149
           V+L+Q C AK+E E+HYD  VSG + Y QI +L+GIS+QELFLW  VKGI VD+ SSGLI
Sbjct: 62  VYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLI 121

Query: 150 HFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMRHGYGVNHL-GIE 209
            FDVGV+ KQ+SLSLFE+P DC A   V    E  G+  D+ +  S  + +  + L G+E
Sbjct: 122 FFDVGVLRKQYSLSLFETPRDCVA---VRGDAEFIGSVFDVAIVSSRSNSWKKHCLAGVE 181

Query: 210 LMLLLRKRIVKHRTFSLRTGNCGQHHRLPIQETLRISRGFHSRVCLCWSENNNF 262
            MLL   R ++      +   C  H  L I  T+ IS   H      WS+ + F
Sbjct: 182 EMLLYYTRKME------KIDRC-SHLFLKILSTVLISNLRHD----SWSDASFF 221

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BLAST of CmaCh01G004810 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538)

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-30
Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 32  IAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFL 91
           ++M+LLL  L+ F +P    S  S+I + L   GLP GL P ++  +S+D  TG  +V L
Sbjct: 1   MSMLLLLLLLVPFITP----SSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQL 60

Query: 92  DQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFD 151
             PC A+FEN V++D  +   LSYG +  L G++ +ELFLW PVKGI V+  SSGL+ FD
Sbjct: 61  QNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFD 120

Query: 152 VGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDL 190
           +GV  KQ S SLFE PP C     +    E +   + L
Sbjct: 121 IGVAHKQISRSLFEDPPVCYPPGSIMEKLEKSKMDIQL 154

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BLAST of CmaCh01G004810 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 68/137 (49.64%), Postives = 88/137 (64.23%), Query Frame = 1


Query: 34  MILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQ 93
           MILLL  L    S L + S P T++D L   GLP GLLP+++  + + +  GR +VFL  
Sbjct: 8   MILLLTTLRLSLS-LSSPSYP-TVHDVLRSEGLPAGLLPQEVDSYILHND-GRLEVFLAA 67

Query: 94  PCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVG 153
           PC AKFE  VH++  V G LSYG +  + G+S +ELFLW  VK I V+  +SG+I FD+G
Sbjct: 68  PCYAKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIG 127

Query: 154 VVDKQFSLSLFESPPDC 171
           V  KQ SLSLFE PP C
Sbjct: 128 VAFKQLSLSLFEDPPKC 141

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BLAST of CmaCh01G004810 vs. NCBI nr
Match: gi|659082203|ref|XP_008441718.1| (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 4.9e-73
Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 40  FLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKF 99
           F +FFASPL+AA DPSTIYDHLHLHGLPIGLLPK+IT+FSIDSSTGRF VFLDQPCNAKF
Sbjct: 13  FFIFFASPLIAAPDPSTIYDHLHLHGLPIGLLPKNITKFSIDSSTGRFHVFLDQPCNAKF 72

Query: 100 ENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQF 159
           ENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGI VDLSSSG+IHFDVGVVDKQF
Sbjct: 73  ENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSGVIHFDVGVVDKQF 132

Query: 160 SLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMR 197
           SLSLFESPPDCTAADPVD SF  N AS+D +   S +
Sbjct: 133 SLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFSTK 169

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BLAST of CmaCh01G004810 vs. NCBI nr
Match: gi|449442285|ref|XP_004138912.1| (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 7.8e-71
Identity = 133/156 (85.26%), Postives = 143/156 (91.67%), Query Frame = 1


Query: 41  LLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKFE 100
           L FFASP + ASDPSTIYDHLHL+GLPIGLLPK+IT+FSIDSSTGRFQVFLDQPCNAKFE
Sbjct: 36  LFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTGRFQVFLDQPCNAKFE 95

Query: 101 NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFS 160
           NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGI VDLS+SGLIHFDVGVVDKQFS
Sbjct: 96  NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFS 155

Query: 161 LSLFESPPDCTAADPVDHSFELNGASVDLNVAISMR 197
           LSLFESP DCTAADPVD S   N AS+D++  +S +
Sbjct: 156 LSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTK 191

[Close]

BLAST of CmaCh01G004810 vs. NCBI nr
Match: gi|1009118302|ref|XP_015875785.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1


Query: 41  LLFFASPLMAA--SDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAK 100
           L  F S L+A+  S P+TIYDHL LHGLPIGLLPK IT+FS D STG FQVFL+ PCNAK
Sbjct: 34  LFLFLSLLIASTSSTPTTIYDHLRLHGLPIGLLPKGITQFSHDPSTGHFQVFLEHPCNAK 93

Query: 101 FENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQ 160
           FEN+VHYDFNVSG LS+G+I EL+G+S+QELFLWFPVKGI VD+ SSGLI+FDVGVVDKQ
Sbjct: 94  FENQVHYDFNVSGTLSFGRIGELSGVSAQELFLWFPVKGIRVDVPSSGLIYFDVGVVDKQ 153

Query: 161 FSLSLFESPPDCTAADPVDHSFELNGASVDLN 191
           FSLSLFESPPDC A DP D S  +    +D++
Sbjct: 154 FSLSLFESPPDCAAVDPSDPSTIVGDDPIDVS 185

[Close]

BLAST of CmaCh01G004810 vs. NCBI nr
Match: gi|1009118300|ref|XP_015875784.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1


Query: 41  LLFFASPLMAA--SDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAK 100
           L  F S L+A+  S P+TIYDHL LHGLPIGLLPK IT+FS D STG FQVFL+ PCNAK
Sbjct: 34  LFLFLSLLIASTSSTPTTIYDHLRLHGLPIGLLPKGITQFSHDPSTGHFQVFLEHPCNAK 93

Query: 101 FENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQ 160
           FEN+VHYDFNVSG LS+G+I EL+G+S+QELFLWFPVKGI VD+ SSGLI+FDVGVVDKQ
Sbjct: 94  FENQVHYDFNVSGTLSFGRIGELSGVSAQELFLWFPVKGIRVDVPSSGLIYFDVGVVDKQ 153

Query: 161 FSLSLFESPPDCTAADPVDHSFELNGASVDLN 191
           FSLSLFESPPDC A DP D S  +    +D++
Sbjct: 154 FSLSLFESPPDCAAVDPSDPSTIVGDDPIDVS 185

[Close]

BLAST of CmaCh01G004810 vs. NCBI nr
Match: gi|703116813|ref|XP_010101226.1| (hypothetical protein L484_005575 [Morus notabilis])

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 101/141 (71.63%), Postives = 116/141 (82.27%), Query Frame = 1


Query: 35  ILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQP 94
           +  L  +LF A+    A+ P+TIYD+L LH LPIGL PK IT FS D STG FQV L+QP
Sbjct: 25  LFALLLILFAAASAALAAAPTTIYDYLRLHDLPIGLFPKGITEFSHDPSTGYFQVLLNQP 84

Query: 95  CNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGV 154
           CNAKFEN+VHYDFNVSG LS+GQI  L+G+++QELFLWFPVKGI VD+ SSGLI+FDVGV
Sbjct: 85  CNAKFENQVHYDFNVSGTLSFGQIGNLSGVTAQELFLWFPVKGIRVDVPSSGLIYFDVGV 144

Query: 155 VDKQFSLSLFESPPDCTAADP 176
           VDKQFSLSLFESPPDCTA DP
Sbjct: 145 VDKQFSLSLFESPPDCTAVDP 165

The following BLAST results are available for this feature:

BLAST of CmaCh01G004810 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G004810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN19_CUCSA	5.5e-71	85.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1	[more]
W9S3W1_9ROSA	1.3e-51	71.63	Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1	[more]
A0A067K3P8_JATCU	2.4e-50	63.47	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1	[more]
M5W029_PRUPE	6.5e-48	63.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011321mg PE=4 SV=1	[more]
A0A061EYN1_THECC	6.1e-46	68.31	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1	[more]

BLAST of CmaCh01G004810 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16380.1	1.6e-42	57.33	Protein of unknown function, DUF538	[more]
AT3G07470.1	7.6e-40	51.22	Protein of unknown function, DUF538	[more]
AT3G07460.2	9.3e-38	42.31	Protein of unknown function, DUF538	[more]
AT1G61667.1	3.2e-30	43.04	Protein of unknown function, DUF538	[more]
AT5G54530.1	1.1e-27	49.64	Protein of unknown function, DUF538	[more]

BLAST of CmaCh01G004810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082203\|ref\|XP_008441718.1\|	4.9e-73	86.62	PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]	[more]
gi\|449442285\|ref\|XP_004138912.1\|	7.8e-71	85.26	PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus]	[more]
gi\|1009118302\|ref\|XP_015875785.1\|	1.0e-54	71.05	PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba]	[more]
gi\|1009118300\|ref\|XP_015875784.1\|	1.0e-54	71.05	PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba]	[more]
gi\|703116813\|ref\|XP_010101226.1\|	1.8e-51	71.63	hypothetical protein L484_005575 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G004810.1	CmaCh01G004810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 49..171 score: 4.0
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 57..165 score: 4.7
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 30..172 score: 2.62
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 25..194 score: 3.4
None	No IPR available	PANTHER	PTHR31676:SF8	SUBFAMILY NOT NAMED	coord: 25..194 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G004810	Cucsa.189490	Cucumber (Gy14) v1	cgycmaB0552
CmaCh01G004810	Cla004130	Watermelon (97103) v1	cmawmB461
CmaCh01G004810	Csa2G99990	Cucumber (Chinese Long) v2	cmacuB441
CmaCh01G004810	MELO3C008555	Melon (DHL92) v3.5.1	cmameB430
CmaCh01G004810	CSPI02G08190	Wild cucumber (PI 183967)	cmacpiB444
CmaCh01G004810	CmoCh05G008620	Cucurbita moschata (Rifu)	cmacmoB485
CmaCh01G004810	CmoCh01G005170	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G004810	Lsi11G009660	Bottle gourd (USVL1VR-Ls)	cmalsiB404
CmaCh01G004810	Cp4.1LG11g07120	Cucurbita pepo (Zucchini)	cmacpeB462
CmaCh01G004810	Cp4.1LG02g12300	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G004810	MELO3C008555.2	Melon (DHL92) v3.6.1	cmamedB494
CmaCh01G004810	CsaV3_2G010570	Cucumber (Chinese Long) v3	cmacucB0532
CmaCh01G004810	Cla97C11G216080	Watermelon (97103) v2	cmawmbB451
CmaCh01G004810	Bhi06G000779	Wax gourd	cmawgoB0555
CmaCh01G004810	CsGy2G008450	Cucumber (Gy14) v2	cgybcmaB205
CmaCh01G004810	Carg20428	Silver-seed gourd	carcmaB0982

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G004810	Watermelon (97103) v2	cmawmbB456
CmaCh01G004810	Cucurbita maxima (Rimu)	cmacmaB428
CmaCh01G004810	Watermelon (Charleston Gray)	cmawcgB395
CmaCh01G004810	Watermelon (97103) v1	cmawmB464