CmaCh01G004810.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G004810.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_11
Location	Cma_Chr01 : 2437137 .. 2440535 (+)
Sequence length	786

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCGCGTGAAGGAAAGAATTGGCAAAAGAAAAAGGAAATTAAAGAGTGAAACGCAAACCTCAGGAAATCCCATTCTTCTCGTCTTCCATCCCCGGCTTTGCCTCTCTGCACTCGCGCCGTTTTTTTCTGCTCCGTTCTTCGGCCTCAAAATCCTCTCAATCCCAACGCCATTTATCAAAAATTCCAATTCCAAATCCAATTCCAGTTCCAAATTCTTCCATCGCCATCGCCATCGCCATCGCCATCGCCATCGCCATGATCCTCCTCCTCGCTTTCCTCCTCTTCTTTGCCTCTCCTCTCATGGCCGCTTCTGACCCATCCACCATCTACGACCATCTCCACCTTCACGGCCTCCCCATCGGCCTCCTTCCCAAGGACATCACCAGATTCTCCATCGACTCTTCCACTGGCCGATTCCAGGTCTTCCTCGACCAGCCCTGCAATGCTAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGTCGCCTCAGCTATGGCCAGATCGCTGAATTGGCTGGAATTTCCTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAAGGAATTCACGTCGATTTGTCCTCTTCTGGTTTAATTCATTTTGACGTCGGCGTTGTTGACAAGCAATTCTCCCTGTCTCTCTTTGAGTCCCCGCCTGATTGCACTGCCGCTGATCCTGTTGATCATTCCTTCGAGTTGAATGGAGCCTCTGTCGATTTGAATGTGGCTATTTCTATGGTACGTTTCAGCTACTGTTTTCGTTCGTTTATCATCTATATTTACTCGTTTCGAATTCGTGTTTATGGTGCAAAAGTAGTTACTATGATGCTTGCTTATGTCTTTGGTTGAATTTTTGCGTTGTTTTTGGGAAATATTGTTGTCTATTATGTATCAGCAGGCATTGGGGTATTATAATTCACATGTAGTTATCATCACGATAATTCTATGTGCTGATTTACCTTGTTATGTTGTAACGATTCCCTGTTTTCAAATCTTATAGAATGATCTGGTTAAAAAATATTACTTCTTTTTAATTCATTGCTTTGTTACCTTCTTGTCGACATTTAGCGTTAGGTTAATGGTTTGGGGTCGAAAAATGATCAAAATGTAGGAGTTGTGTGTTAAGTTTGTGATAGAATTTTAAGTTGTAGAGACATGGCTATGGAGTGAATCATTTGGGCATTGAATTAATGCTTCTTCTAAGAAAAAGAATGTTTAATGCGGTGGTATAGTTCGTCGTGCCATATCATAATAATATTATCGCCGTGTTCGTTCGAGCGAGTGATGGGTGTGGATGGCTTTAGGAATTTTGAATGGATGTTCATGTCCATTACTGCAAGTAGCAAAGATTGAGACTGATTAAGGCCTTGTGTGTTGATATTAATAGGATCATCCAAGTTGTAATTCATAACTTTATGATCTTTCTTTTAGTTACAATGTATTTTCTTTTGATTTATGGTCGCTAGGCTCTTGTTTTTCTATTTGTCATAATTTTGCATTATATTTTGGAATTCTTCATAATGTAGTCATATGTTCTTAATTAAGAGGTTGTTTCTTTGGATTGTCATATAATTTCAGAGTGAAGCACAGAACCTTCAGCTTGAGGACAGGGAACTGCGGGCAGCATCATAGATTACCAATACAAGAAACGTTACGGATTTCCCGAGGCTTTCATTCAAGAGTCTGCCTTTGCTGGTCTGGTAAATTTGTTTCTGCTATTTGTGGATTGCTTTTGTTTTGTATAGTCTTTGTTTCCTAATAGTCCTGTCTTATGGGGATAAGGAGGCTATTATATATTCATATAAAGAGCTCACAGAAATACTTAGCCTCCAATCCTTTAAGTCTATACTATTATTATCTGAATTTAAGCGAGGGAGATTGTTGCTTGGGTCGGCTTATAAGAATCCTAGAAGTCATGTCTGGTATAAGTTTAGCAGTCGTCTTGTCTGTTGTAAGTGCTTTTTATATCTCTTTATGAAGTATATCACTGCTTCTGGCTGTGGTTGGCATTGGCTACTCACAAAAAGAAGTTTTGTTTTGTTGTGTTGCCTCTATAGCCATAAAGTGTGGGCTTGTAAATTGTACATTGCAAAAGTGTTATTTTAGTAGCTAAAAGAGGATTTACATGTATTTTATTATCATGAAGCTTAGGAATATTTAGTATCCTAATCGGAATATACTTTTGTAGGAAAAAATGAACTGGAGTTCTATTCAGGATAAGAGTCATTCGAATCCTTTAAATTGTCCGGACGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTAACGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTAACGTCATTTACTGTCATCGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATCGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATCGTCTTCGATTAGATAATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTAGATGATGCGTCATGTCTTCGATTAGATGATGCGTCCTGGCGTCATTTACTGTCATGTCTTCGATTCAATTGCTTTAGTAAACTACTAACTATGCTTCAAAGACAGCAATCTCATTATAGATAGTCATTTCAAACGTCTTGGGTTCTTTTCTTGTCCTCAAAACTCTTGTACCTTTCCTTCCCAGTCTTAAAGATGATTCTTCTAAAGTGGATATCATAGTTACAAACTCTTGTACATTTCAAACGTCTTGGGAAGTTTTTTGAGTTCCATTGGGATGGGCTTTACGTGCTTTTTAAGGTTAAATTACAAGTTTAGGTTTGAAACGTTTCGAATTCATGTTTATTTGGTATTTGAATTTTACTAGTTGTGTAATAGGTTTATGAACTTATGAACGTTGAAAATACGTTTTTGGTCCCTATTGTTTGGTACTTTTTCAATTTGATCACAAGTGTTTAAATAGTTTTAATTTAGTCCATTATGTTTTTTCAATTACTTAACTCAATTAGTGTCGATGTTCGTTAATTCTAATAATATTCCACAATAAGCATAAGAATGTTAGAAACATAAAAGGACCAAATTGAAAAAACGTTAAAACCTAGTTGCATTTTATATTTATTTTAATAAATATGCTAGAGAATAATAATTTCTAG

mRNA sequence

ATGAAGCGCGTGAAGGAAAGAATTGGCAAAAGAAAAAGGAAATTAAAGATTCCAAATTCTTCCATCGCCATCGCCATCGCCATCGCCATCGCCATCGCCATGATCCTCCTCCTCGCTTTCCTCCTCTTCTTTGCCTCTCCTCTCATGGCCGCTTCTGACCCATCCACCATCTACGACCATCTCCACCTTCACGGCCTCCCCATCGGCCTCCTTCCCAAGGACATCACCAGATTCTCCATCGACTCTTCCACTGGCCGATTCCAGGTCTTCCTCGACCAGCCCTGCAATGCTAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGTCGCCTCAGCTATGGCCAGATCGCTGAATTGGCTGGAATTTCCTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAAGGAATTCACGTCGATTTGTCCTCTTCTGGTTTAATTCATTTTGACGTCGGCGTTGTTGACAAGCAATTCTCCCTGTCTCTCTTTGAGTCCCCGCCTGATTGCACTGCCGCTGATCCTGTTGATCATTCCTTCGAGTTGAATGGAGCCTCTGTCGATTTGAATGTGGCTATTTCTATGAGACATGGCTATGGAGTGAATCATTTGGGCATTGAATTAATGCTTCTTCTAAGAAAAAGAATAGTGAAGCACAGAACCTTCAGCTTGAGGACAGGGAACTGCGGGCAGCATCATAGATTACCAATACAAGAAACGTTACGGATTTCCCGAGGCTTTCATTCAAGAGTCTGCCTTTGCTGGTCTGAGAATAATAATTTCTAG

Coding sequence (CDS)

ATGAAGCGCGTGAAGGAAAGAATTGGCAAAAGAAAAAGGAAATTAAAGATTCCAAATTCTTCCATCGCCATCGCCATCGCCATCGCCATCGCCATCGCCATGATCCTCCTCCTCGCTTTCCTCCTCTTCTTTGCCTCTCCTCTCATGGCCGCTTCTGACCCATCCACCATCTACGACCATCTCCACCTTCACGGCCTCCCCATCGGCCTCCTTCCCAAGGACATCACCAGATTCTCCATCGACTCTTCCACTGGCCGATTCCAGGTCTTCCTCGACCAGCCCTGCAATGCTAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGTCGCCTCAGCTATGGCCAGATCGCTGAATTGGCTGGAATTTCCTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAAGGAATTCACGTCGATTTGTCCTCTTCTGGTTTAATTCATTTTGACGTCGGCGTTGTTGACAAGCAATTCTCCCTGTCTCTCTTTGAGTCCCCGCCTGATTGCACTGCCGCTGATCCTGTTGATCATTCCTTCGAGTTGAATGGAGCCTCTGTCGATTTGAATGTGGCTATTTCTATGAGACATGGCTATGGAGTGAATCATTTGGGCATTGAATTAATGCTTCTTCTAAGAAAAAGAATAGTGAAGCACAGAACCTTCAGCTTGAGGACAGGGAACTGCGGGCAGCATCATAGATTACCAATACAAGAAACGTTACGGATTTCCCGAGGCTTTCATTCAAGAGTCTGCCTTTGCTGGTCTGAGAATAATAATTTCTAG

Protein sequence

MKRVKERIGKRKRKLKIPNSSIAIAIAIAIAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMRHGYGVNHLGIELMLLLRKRIVKHRTFSLRTGNCGQHHRLPIQETLRISRGFHSRVCLCWSENNNF

Homology

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BLAST of CmaCh01G004810.1 vs. TrEMBL
Match: A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.5e-71
Identity = 133/156 (85.26%), Postives = 143/156 (91.67%), Query Frame = 1


Query: 41  LLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKFE 100
           L FFASP + ASDPSTIYDHLHL+GLPIGLLPK+IT+FSIDSSTGRFQVFLDQPCNAKFE
Sbjct: 36  LFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTGRFQVFLDQPCNAKFE 95

Query: 101 NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFS 160
           NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGI VDLS+SGLIHFDVGVVDKQFS
Sbjct: 96  NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFS 155

Query: 161 LSLFESPPDCTAADPVDHSFELNGASVDLNVAISMR 197
           LSLFESP DCTAADPVD S   N AS+D++  +S +
Sbjct: 156 LSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTK 191

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BLAST of CmaCh01G004810.1 vs. TrEMBL
Match: W9S3W1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 101/141 (71.63%), Postives = 116/141 (82.27%), Query Frame = 1


Query: 35  ILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQP 94
           +  L  +LF A+    A+ P+TIYD+L LH LPIGL PK IT FS D STG FQV L+QP
Sbjct: 25  LFALLLILFAAASAALAAAPTTIYDYLRLHDLPIGLFPKGITEFSHDPSTGYFQVLLNQP 84

Query: 95  CNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGV 154
           CNAKFEN+VHYDFNVSG LS+GQI  L+G+++QELFLWFPVKGI VD+ SSGLI+FDVGV
Sbjct: 85  CNAKFENQVHYDFNVSGTLSFGQIGNLSGVTAQELFLWFPVKGIRVDVPSSGLIYFDVGV 144

Query: 155 VDKQFSLSLFESPPDCTAADP 176
           VDKQFSLSLFESPPDCTA DP
Sbjct: 145 VDKQFSLSLFESPPDCTAVDP 165

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BLAST of CmaCh01G004810.1 vs. TrEMBL
Match: A0A067K3P8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.4e-50
Identity = 106/167 (63.47%), Postives = 130/167 (77.84%), Query Frame = 1


Query: 18  PNSSIAIAIAIAIAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITR 77
           P++S+    A  ++I  +L L   L    PL AAS  S+IYDHL L+GLPIGLLP+ IT 
Sbjct: 4   PSNSVTFLHAPTLSITFLLFLTCHL----PLSAASQ-SSIYDHLRLNGLPIGLLPQGITD 63

Query: 78  FSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKG 137
           FS+D++TG FQV L QPCNAKFEN++HYDFN+SG LS+G+I EL+G+S QELFLWFPVKG
Sbjct: 64  FSLDATTGHFQVNLTQPCNAKFENQLHYDFNISGLLSFGKIGELSGVSQQELFLWFPVKG 123

Query: 138 IHVDLSSSGLIHFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNG 185
           I VD+ SSGLI+FDVGVVDKQFSLSLFE+P +CTAADP D   +  G
Sbjct: 124 IRVDVPSSGLIYFDVGVVDKQFSLSLFENPTECTAADPGDRPVDSPG 165

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BLAST of CmaCh01G004810.1 vs. TrEMBL
Match: M5W029_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011321mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.5e-48
Identity = 96/151 (63.58%), Postives = 120/151 (79.47%), Query Frame = 1


Query: 30  IAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQV 89
           + I  ++++  +L   +   A S  S+IYDHL   GLP+G+LPK IT +S++ STG F+V
Sbjct: 25  VLILFLVVVVVVLPLPTTATAVSPSSSIYDHLRQQGLPMGILPKGITEYSLNGSTGEFRV 84

Query: 90  FLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIH 149
            L QPC+AKFEN+V YDFNVSG LS+G+IA L+G+S+QELFLWFPVKGI VD+ SSGLI+
Sbjct: 85  LLAQPCHAKFENQVLYDFNVSGVLSFGRIANLSGVSAQELFLWFPVKGIRVDVPSSGLIY 144

Query: 150 FDVGVVDKQFSLSLFESPPDCTAADPVDHSF 181
           FDVGVVDKQFSLSLFESPPDCTA DP D +F
Sbjct: 145 FDVGVVDKQFSLSLFESPPDCTAVDPSDPNF 175

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BLAST of CmaCh01G004810.1 vs. TrEMBL
Match: A0A061EYN1_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.1e-46
Identity = 97/142 (68.31%), Postives = 110/142 (77.46%), Query Frame = 1


Query: 36  LLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPC 95
           L L FL    S   A S PS+IYDHL  +GLP+GLLPK IT FSID  T RFQV L +PC
Sbjct: 12  LSLTFLFISLSFPTAQSSPSSIYDHLERNGLPMGLLPKGITEFSIDPETHRFQVNLTEPC 71

Query: 96  NAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVV 155
           NAKFEN++HYDF +SG LS+G+IA L+G++ QELFLWFPV  I VD  SSGLI+FDVGVV
Sbjct: 72  NAKFENQLHYDFIISGVLSFGKIANLSGVTQQELFLWFPVISIRVDDPSSGLINFDVGVV 131

Query: 156 DKQFSLSLFESPPDCTAADPVD 178
           DKQFSLSLFESP DCTA DP D
Sbjct: 132 DKQFSLSLFESPRDCTAVDPDD 153

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BLAST of CmaCh01G004810.1 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42
Identity = 86/150 (57.33%), Postives = 109/150 (72.67%), Query Frame = 1


Query: 34  MILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQ 93
           +I+L + +LF    L +  DPS  YD+L    LP G++PK +T FSID  TGRF V L  
Sbjct: 11  IIVLFSSILF--PQLSSLPDPS-FYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPV 70

Query: 94  PCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVG 153
           PC+AKFEN+ H+D+N+SG LS G+I  L+G++ +ELFLWF VKGIHVD  SSGLIHFDVG
Sbjct: 71  PCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVG 130

Query: 154 VVDKQFSLSLFESPPDCTAADPVDHSFELN 184
           V DKQ SLSLFESP DCTAA+    + +L+
Sbjct: 131 VADKQLSLSLFESPRDCTAAESQPRAVDLS 157

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BLAST of CmaCh01G004810.1 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538)

HSP 1 Score: 161.4 bits (407), Expect = 7.6e-40
Identity = 84/164 (51.22%), Postives = 112/164 (68.29%), Query Frame = 1


Query: 28  IAIAIAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRF 87
           + IA   ++L+A +    S   A S+  TIY+ L  +GLP G+ PK +  F+ D  TGRF
Sbjct: 6   VQIAFLCLVLVAGI----SISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRF 65

Query: 88  QVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGL 147
            V+L+Q C AK+E E+HYD N++G +   QI++L+GIS+QELFLWFPVKGI VD+ SSGL
Sbjct: 66  SVYLNQACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGL 125

Query: 148 IHFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNV 192
           I+FDVGVV KQ+SLSLFE+P DC     + H  EL    VD N+
Sbjct: 126 IYFDVGVVRKQYSLSLFETPRDCVPVRGI-HKVELPLYRVDQNL 164

[Close]

BLAST of CmaCh01G004810.1 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 154.5 bits (389), Expect = 9.3e-38
Identity = 99/234 (42.31%), Postives = 137/234 (58.55%), Query Frame = 1


Query: 30  IAIAMILLLAFLLFFASPLMAA-SDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQ 89
           + I  I LL F+L     + A  ++  +I + L  +GLP+GL PK +  F+++  TGRF 
Sbjct: 2   LRIVQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFS 61

Query: 90  VFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLI 149
           V+L+Q C AK+E E+HYD  VSG + Y QI +L+GIS+QELFLW  VKGI VD+ SSGLI
Sbjct: 62  VYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLI 121

Query: 150 HFDVGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMRHGYGVNHL-GIE 209
            FDVGV+ KQ+SLSLFE+P DC A   V    E  G+  D+ +  S  + +  + L G+E
Sbjct: 122 FFDVGVLRKQYSLSLFETPRDCVA---VRGDAEFIGSVFDVAIVSSRSNSWKKHCLAGVE 181

Query: 210 LMLLLRKRIVKHRTFSLRTGNCGQHHRLPIQETLRISRGFHSRVCLCWSENNNF 262
            MLL   R ++      +   C  H  L I  T+ IS   H      WS+ + F
Sbjct: 182 EMLLYYTRKME------KIDRC-SHLFLKILSTVLISNLRHD----SWSDASFF 221

[Close]

BLAST of CmaCh01G004810.1 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538)

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-30
Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 32  IAMILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFL 91
           ++M+LLL  L+ F +P    S  S+I + L   GLP GL P ++  +S+D  TG  +V L
Sbjct: 1   MSMLLLLLLLVPFITP----SSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQL 60

Query: 92  DQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFD 151
             PC A+FEN V++D  +   LSYG +  L G++ +ELFLW PVKGI V+  SSGL+ FD
Sbjct: 61  QNPCFARFENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFD 120

Query: 152 VGVVDKQFSLSLFESPPDCTAADPVDHSFELNGASVDL 190
           +GV  KQ S SLFE PP C     +    E +   + L
Sbjct: 121 IGVAHKQISRSLFEDPPVCYPPGSIMEKLEKSKMDIQL 154

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BLAST of CmaCh01G004810.1 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 68/137 (49.64%), Postives = 88/137 (64.23%), Query Frame = 1


Query: 34  MILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQ 93
           MILLL  L    S L + S P T++D L   GLP GLLP+++  + + +  GR +VFL  
Sbjct: 8   MILLLTTLRLSLS-LSSPSYP-TVHDVLRSEGLPAGLLPQEVDSYILHND-GRLEVFLAA 67

Query: 94  PCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVG 153
           PC AKFE  VH++  V G LSYG +  + G+S +ELFLW  VK I V+  +SG+I FD+G
Sbjct: 68  PCYAKFETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIG 127

Query: 154 VVDKQFSLSLFESPPDC 171
           V  KQ SLSLFE PP C
Sbjct: 128 VAFKQLSLSLFEDPPKC 141

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BLAST of CmaCh01G004810.1 vs. NCBI nr
Match: gi|659082203|ref|XP_008441718.1| (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 4.9e-73
Identity = 136/157 (86.62%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 40  FLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKF 99
           F +FFASPL+AA DPSTIYDHLHLHGLPIGLLPK+IT+FSIDSSTGRF VFLDQPCNAKF
Sbjct: 13  FFIFFASPLIAAPDPSTIYDHLHLHGLPIGLLPKNITKFSIDSSTGRFHVFLDQPCNAKF 72

Query: 100 ENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQF 159
           ENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGI VDLSSSG+IHFDVGVVDKQF
Sbjct: 73  ENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSGVIHFDVGVVDKQF 132

Query: 160 SLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMR 197
           SLSLFESPPDCTAADPVD SF  N AS+D +   S +
Sbjct: 133 SLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFSTK 169

[Close]

BLAST of CmaCh01G004810.1 vs. NCBI nr
Match: gi|449442285|ref|XP_004138912.1| (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 7.8e-71
Identity = 133/156 (85.26%), Postives = 143/156 (91.67%), Query Frame = 1


Query: 41  LLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAKFE 100
           L FFASP + ASDPSTIYDHLHL+GLPIGLLPK+IT+FSIDSSTGRFQVFLDQPCNAKFE
Sbjct: 36  LFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTGRFQVFLDQPCNAKFE 95

Query: 101 NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFS 160
           NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGI VDLS+SGLIHFDVGVVDKQFS
Sbjct: 96  NEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFS 155

Query: 161 LSLFESPPDCTAADPVDHSFELNGASVDLNVAISMR 197
           LSLFESP DCTAADPVD S   N AS+D++  +S +
Sbjct: 156 LSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTK 191

[Close]

BLAST of CmaCh01G004810.1 vs. NCBI nr
Match: gi|1009118302|ref|XP_015875785.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1


Query: 41  LLFFASPLMAA--SDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAK 100
           L  F S L+A+  S P+TIYDHL LHGLPIGLLPK IT+FS D STG FQVFL+ PCNAK
Sbjct: 34  LFLFLSLLIASTSSTPTTIYDHLRLHGLPIGLLPKGITQFSHDPSTGHFQVFLEHPCNAK 93

Query: 101 FENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQ 160
           FEN+VHYDFNVSG LS+G+I EL+G+S+QELFLWFPVKGI VD+ SSGLI+FDVGVVDKQ
Sbjct: 94  FENQVHYDFNVSGTLSFGRIGELSGVSAQELFLWFPVKGIRVDVPSSGLIYFDVGVVDKQ 153

Query: 161 FSLSLFESPPDCTAADPVDHSFELNGASVDLN 191
           FSLSLFESPPDC A DP D S  +    +D++
Sbjct: 154 FSLSLFESPPDCAAVDPSDPSTIVGDDPIDVS 185

[Close]

BLAST of CmaCh01G004810.1 vs. NCBI nr
Match: gi|1009118300|ref|XP_015875784.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-54
Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1


Query: 41  LLFFASPLMAA--SDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPCNAK 100
           L  F S L+A+  S P+TIYDHL LHGLPIGLLPK IT+FS D STG FQVFL+ PCNAK
Sbjct: 34  LFLFLSLLIASTSSTPTTIYDHLRLHGLPIGLLPKGITQFSHDPSTGHFQVFLEHPCNAK 93

Query: 101 FENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQ 160
           FEN+VHYDFNVSG LS+G+I EL+G+S+QELFLWFPVKGI VD+ SSGLI+FDVGVVDKQ
Sbjct: 94  FENQVHYDFNVSGTLSFGRIGELSGVSAQELFLWFPVKGIRVDVPSSGLIYFDVGVVDKQ 153

Query: 161 FSLSLFESPPDCTAADPVDHSFELNGASVDLN 191
           FSLSLFESPPDC A DP D S  +    +D++
Sbjct: 154 FSLSLFESPPDCAAVDPSDPSTIVGDDPIDVS 185

[Close]

BLAST of CmaCh01G004810.1 vs. NCBI nr
Match: gi|703116813|ref|XP_010101226.1| (hypothetical protein L484_005575 [Morus notabilis])

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 101/141 (71.63%), Postives = 116/141 (82.27%), Query Frame = 1


Query: 35  ILLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQP 94
           +  L  +LF A+    A+ P+TIYD+L LH LPIGL PK IT FS D STG FQV L+QP
Sbjct: 25  LFALLLILFAAASAALAAAPTTIYDYLRLHDLPIGLFPKGITEFSHDPSTGYFQVLLNQP 84

Query: 95  CNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGV 154
           CNAKFEN+VHYDFNVSG LS+GQI  L+G+++QELFLWFPVKGI VD+ SSGLI+FDVGV
Sbjct: 85  CNAKFENQVHYDFNVSGTLSFGQIGNLSGVTAQELFLWFPVKGIRVDVPSSGLIYFDVGV 144

Query: 155 VDKQFSLSLFESPPDCTAADP 176
           VDKQFSLSLFESPPDCTA DP
Sbjct: 145 VDKQFSLSLFESPPDCTAVDP 165

The following BLAST results are available for this feature:

BLAST of CmaCh01G004810.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G004810.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN19_CUCSA	5.5e-71	85.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1	[more]
W9S3W1_9ROSA	1.3e-51	71.63	Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1	[more]
A0A067K3P8_JATCU	2.4e-50	63.47	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1	[more]
M5W029_PRUPE	6.5e-48	63.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011321mg PE=4 SV=1	[more]
A0A061EYN1_THECC	6.1e-46	68.31	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1	[more]

BLAST of CmaCh01G004810.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16380.1	1.6e-42	57.33	Protein of unknown function, DUF538	[more]
AT3G07470.1	7.6e-40	51.22	Protein of unknown function, DUF538	[more]
AT3G07460.2	9.3e-38	42.31	Protein of unknown function, DUF538	[more]
AT1G61667.1	3.2e-30	43.04	Protein of unknown function, DUF538	[more]
AT5G54530.1	1.1e-27	49.64	Protein of unknown function, DUF538	[more]

BLAST of CmaCh01G004810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082203\|ref\|XP_008441718.1\|	4.9e-73	86.62	PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]	[more]
gi\|449442285\|ref\|XP_004138912.1\|	7.8e-71	85.26	PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus]	[more]
gi\|1009118302\|ref\|XP_015875785.1\|	1.0e-54	71.05	PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba]	[more]
gi\|1009118300\|ref\|XP_015875784.1\|	1.0e-54	71.05	PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba]	[more]
gi\|703116813\|ref\|XP_010101226.1\|	1.8e-51	71.63	hypothetical protein L484_005575 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh01G004810	CmaCh01G004810	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh01G004810.1	CmaCh01G004810.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G004810.1.exon.1	CmaCh01G004810.1.exon.1	exon
CmaCh01G004810.1.exon.2	CmaCh01G004810.1.exon.2	exon
CmaCh01G004810.1.exon.3	CmaCh01G004810.1.exon.3	exon
CmaCh01G004810.1.exon.4	CmaCh01G004810.1.exon.4	exon
CmaCh01G004810.1.exon.5	CmaCh01G004810.1.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh01G004810.1.CDS.1	CmaCh01G004810.1.CDS.1	CDS
CmaCh01G004810.1.CDS.2	CmaCh01G004810.1.CDS.2	CDS
CmaCh01G004810.1.CDS.3	CmaCh01G004810.1.CDS.3	CDS
CmaCh01G004810.1.CDS.4	CmaCh01G004810.1.CDS.4	CDS
CmaCh01G004810.1.CDS.5	CmaCh01G004810.1.CDS.5	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 49..171 score: 4.0
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 57..165 score: 4.7
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 30..172 score: 2.62
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 25..194 score: 3.4
None	No IPR available	PANTHER	PTHR31676:SF8	SUBFAMILY NOT NAMED	coord: 25..194 score: 3.4