Cla004130 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004130
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	POT family domain containing protein expressed (AHRD V1 -- D8L9H8_WHEAT); contains Interpro domain(s) IPR007493 Protein of unknown function DUF538
Location	Chr11 : 5939676 .. 5940939 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCTGTCTCTCTCTTCCCCTTTCTCACTCCTCCCTTTAATCCTCTTCTTCTTCGCCTCCCCTCTCATCGGCTCTCCTGACCCATCCACAATCTACGACCATCTCCACCTTCACGGTCTCCCCATCGGCCTCCTTCCCAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGCCGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGCAGGCTCTCCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCCCACTTCTGGTGTAATTCATTTCGACGTTGGTGTTGTTGACAAGCAATTCTCTCTTTCCCCCTTTGAGTCCCCGCTTGATTGCACTGCCGCTGATGATCAATCCTTCGCCTTCAATGGAGCCTCTGTTGATTTGGATGGGCCTTTTTCGATGGTACGTTGGAGCTTTTTTTTATTTTTTATTATTTTTTTTATTATTATTATTATTTTTTTTTTTTGCTTCATCATCTATTTTACTTGGCCCGAAATTGATACTTATTGTGCGAAAATAATTATGATGATATTGATATCTTTGCTTAAATTTTTGCGGTGTTTTGGGAAATATTGTTGTTCATTGTGGACCAGGAAGCATTAGTATTATACTTCACTTAGGTCGGACATGTTGTGCCAATTATCAGTAGGATAACTCCATGTTATGATTTGCCTTGTTTATATCGTATAACTGGATTATTTGTTAATTCATGTTTTCTAAATTTTGTAGAAGATATGTTTAAAGATATTTCATTGCTTTGCTACCTGGTAATCAATATTTAGCATTAGATTAATGCTGTGTGGTGGAAACATGCAGTTTTAGCTGATTCTGATTTTAGACAATTTTTTTTTTTTTTTTGATATCCGTAAGTGTAAGTGTCGGATACCTCACAGGACAACCCGCCTAACCTTACAACATTTGGGTGTCAAGAAAACTCGTAAGATATTAAATCGTAAATAGGTGGCTACTATGGACTGAACCCATGACCTCTTAGCCATTATATGTCTCCTTTTTTACCATTATGCCAATCCACCTGACCTTACAACATTTGAGTGTTAAGGAAACTCGTAGGATATTAAATCCTAGATAGGTGGCTACCATAGATTGAACCAATGAGCTCTTAACCATTCTATGTTTCTTTTTTTACCATTAGGCCAATTGA

mRNA sequence

ATGACCCTGTCTCTCTCTTCCCCTTTCTCACTCCTCCCTTTAATCCTCTTCTTCTTCGCCTCCCCTCTCATCGGCTCTCCTGACCCATCCACAATCTACGACCATCTCCACCTTCACGGTCTCCCCATCGGCCTCCTTCCCAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGCCGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGCAGGCTCTCCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCCCACTTCTGGTGTAATTCATTTCGACGTTGGTGTTGTTGACAAGCAATTCTCTCTTTCCCCCTTTGAGTCCCCGCTTGATTGCACTGCCGCTGATGATCAATCCTTCGCCTTCAATGGAGCCTCTGTTGATTTGGATGGGCCTTTTTCGATGGCCAATTGA

Coding sequence (CDS)

ATGACCCTGTCTCTCTCTTCCCCTTTCTCACTCCTCCCTTTAATCCTCTTCTTCTTCGCCTCCCCTCTCATCGGCTCTCCTGACCCATCCACAATCTACGACCATCTCCACCTTCACGGTCTCCCCATCGGCCTCCTTCCCAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGCCGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAATGTCTCCGGCAGGCTCTCCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCCCACTTCTGGTGTAATTCATTTCGACGTTGGTGTTGTTGACAAGCAATTCTCTCTTTCCCCCTTTGAGTCCCCGCTTGATTGCACTGCCGCTGATGATCAATCCTTCGCCTTCAATGGAGCCTCTGTTGATTTGGATGGGCCTTTTTCGATGGCCAATTGA

Protein sequence

MTLSLSSPFSLLPLILFFFASPLIGSPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSPFESPLDCTAADDQSFAFNGASVDLDGPFSMAN

Homology

[Close]

BLAST of Cla004130 vs. TrEMBL
Match: A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.8e-73
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 1


Query: 1   MTLSLSSPFSLLPLILFFFASPLIGSPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTG 60
           MTL L SPF +   ILFFFASP I + DPSTIYDHLHL+GLPIGLLPKNIT+FSIDSSTG
Sbjct: 24  MTLFLFSPFFI---ILFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTG 83

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDL TS
Sbjct: 84  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTS 143

Query: 121 GVIHFDVGVVDKQFSLSPFESPLDCTAAD--DQSFAFNGASVDLDGPFS 168
           G+IHFDVGVVDKQFSLS FESP+DCTAAD  D+S AFN AS+D+D P S
Sbjct: 144 GLIHFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLS 189

[Close]

BLAST of Cla004130 vs. TrEMBL
Match: W9S3W1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-49
Identity = 101/148 (68.24%), Postives = 118/148 (79.73%), Query Frame = 1


Query: 3   LSLSSPFSLLPLILFFFASPLIG-SPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGR 62
           L L+ P  L  L+L  FA+     +  P+TIYD+L LH LPIGL PK IT FS D STG 
Sbjct: 17  LFLAFPHFLFALLLILFAAASAALAAAPTTIYDYLRLHDLPIGLFPKGITEFSHDPSTGY 76

Query: 63  FQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTSG 122
           FQV L+QPCNAKFEN+VHYDFNVSG LS+GQI  L+G+++QELFLWFPVKGIRVD+P+SG
Sbjct: 77  FQVLLNQPCNAKFENQVHYDFNVSGTLSFGQIGNLSGVTAQELFLWFPVKGIRVDVPSSG 136

Query: 123 VIHFDVGVVDKQFSLSPFESPLDCTAAD 150
           +I+FDVGVVDKQFSLS FESP DCTA D
Sbjct: 137 LIYFDVGVVDKQFSLSLFESPPDCTAVD 164

[Close]

BLAST of Cla004130 vs. TrEMBL
Match: A0A067K3P8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-48
Identity = 94/145 (64.83%), Postives = 118/145 (81.38%), Query Frame = 1


Query: 5   LSSPFSLLPLILFFFASPLIGSPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGRFQV 64
           L +P   +  +LF      + +   S+IYDHL L+GLPIGLLP+ IT FS+D++TG FQV
Sbjct: 11  LHAPTLSITFLLFLTCHLPLSAASQSSIYDHLRLNGLPIGLLPQGITDFSLDATTGHFQV 70

Query: 65  FLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIH 124
            L QPCNAKFEN++HYDFN+SG LS+G+I EL+G+S QELFLWFPVKGIRVD+P+SG+I+
Sbjct: 71  NLTQPCNAKFENQLHYDFNISGLLSFGKIGELSGVSQQELFLWFPVKGIRVDVPSSGLIY 130

Query: 125 FDVGVVDKQFSLSPFESPLDCTAAD 150
           FDVGVVDKQFSLS FE+P +CTAAD
Sbjct: 131 FDVGVVDKQFSLSLFENPTECTAAD 155

[Close]

BLAST of Cla004130 vs. TrEMBL
Match: B9RM55_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1077750 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-44
Identity = 90/148 (60.81%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 2   TLSLSSPFSLLPLILFFFASPLIGSPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGR 61
           T SL+ P  L   + F        +    +IYDHL  + LP+GL PK IT FS D++ G 
Sbjct: 5   TKSLNFPHFLTFYLTFVLIILPFSTQSTPSIYDHLRQNSLPVGLFPKGITDFSYDTTNGH 64

Query: 62  FQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTSG 121
           FQ+ L QPCNAKFEN++HYDFN+SG LS+G+I EL+GIS QELFLWFPVKGIRVD+P+SG
Sbjct: 65  FQINLIQPCNAKFENQLHYDFNISGFLSFGKIGELSGISQQELFLWFPVKGIRVDVPSSG 124

Query: 122 VIHFDVGVVDKQFSLSPFESPLDCTAAD 150
           +I+FDVGVVDKQFSLS FE+P++CTA D
Sbjct: 125 LIYFDVGVVDKQFSLSLFENPIECTAVD 152

[Close]

BLAST of Cla004130 vs. TrEMBL
Match: A0A061EYN1_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-44
Identity = 95/147 (64.63%), Postives = 111/147 (75.51%), Query Frame = 1


Query: 7   SPFSLLPLI----LFFFASPLIGSPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGRF 66
           S FSL P +    LF   S       PS+IYDHL  +GLP+GLLPK IT FSID  T RF
Sbjct: 4   SIFSLFPALSLTFLFISLSFPTAQSSPSSIYDHLERNGLPMGLLPKGITEFSIDPETHRF 63

Query: 67  QVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTSGV 126
           QV L +PCNAKFEN++HYDF +SG LS+G+IA L+G++ QELFLWFPV  IRVD P+SG+
Sbjct: 64  QVNLTEPCNAKFENQLHYDFIISGVLSFGKIANLSGVTQQELFLWFPVISIRVDDPSSGL 123

Query: 127 IHFDVGVVDKQFSLSPFESPLDCTAAD 150
           I+FDVGVVDKQFSLS FESP DCTA D
Sbjct: 124 INFDVGVVDKQFSLSLFESPRDCTAVD 150

[Close]

BLAST of Cla004130 vs. NCBI nr
Match: gi|659082203|ref|XP_008441718.1| (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 8.4e-74
Identity = 146/169 (86.39%), Postives = 150/169 (88.76%), Query Frame = 1


Query: 1   MTLSLSSPFSLLPLILFFFASPLIGSPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTG 60
           MTL L SPF     I  FFASPLI +PDPSTIYDHLHLHGLPIGLLPKNIT+FSIDSSTG
Sbjct: 1   MTLFLFSPFFFFFFI--FFASPLIAAPDPSTIYDHLHLHGLPIGLLPKNITKFSIDSSTG 60

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RF VFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDL +S
Sbjct: 61  RFHVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSS 120

Query: 121 GVIHFDVGVVDKQFSLSPFESPLDCTAAD--DQSFAFNGASVDLDGPFS 168
           GVIHFDVGVVDKQFSLS FESP DCTAAD  DQSFAFN AS+D D PFS
Sbjct: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFS 167

[Close]

BLAST of Cla004130 vs. NCBI nr
Match: gi|449442285|ref|XP_004138912.1| (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 5.5e-73
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 1


Query: 1   MTLSLSSPFSLLPLILFFFASPLIGSPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTG 60
           MTL L SPF +   ILFFFASP I + DPSTIYDHLHL+GLPIGLLPKNIT+FSIDSSTG
Sbjct: 24  MTLFLFSPFFI---ILFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTG 83

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDL TS
Sbjct: 84  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTS 143

Query: 121 GVIHFDVGVVDKQFSLSPFESPLDCTAAD--DQSFAFNGASVDLDGPFS 168
           G+IHFDVGVVDKQFSLS FESP+DCTAAD  D+S AFN AS+D+D P S
Sbjct: 144 GLIHFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLS 189

[Close]

BLAST of Cla004130 vs. NCBI nr
Match: gi|1009118300|ref|XP_015875784.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 109/150 (72.67%), Postives = 123/150 (82.00%), Query Frame = 1


Query: 2   TLSLSSPFSLLPLILFFFASPLIGSPD--PSTIYDHLHLHGLPIGLLPKNITRFSIDSST 61
           TLSL+ P  L    LF F S LI S    P+TIYDHL LHGLPIGLLPK IT+FS D ST
Sbjct: 23  TLSLNFPHFLS---LFLFLSLLIASTSSTPTTIYDHLRLHGLPIGLLPKGITQFSHDPST 82

Query: 62  GRFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPT 121
           G FQVFL+ PCNAKFEN+VHYDFNVSG LS+G+I EL+G+S+QELFLWFPVKGIRVD+P+
Sbjct: 83  GHFQVFLEHPCNAKFENQVHYDFNVSGTLSFGRIGELSGVSAQELFLWFPVKGIRVDVPS 142

Query: 122 SGVIHFDVGVVDKQFSLSPFESPLDCTAAD 150
           SG+I+FDVGVVDKQFSLS FESP DC A D
Sbjct: 143 SGLIYFDVGVVDKQFSLSLFESPPDCAAVD 169

[Close]

BLAST of Cla004130 vs. NCBI nr
Match: gi|1009118302|ref|XP_015875785.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 109/150 (72.67%), Postives = 123/150 (82.00%), Query Frame = 1


Query: 2   TLSLSSPFSLLPLILFFFASPLIGSPD--PSTIYDHLHLHGLPIGLLPKNITRFSIDSST 61
           TLSL+ P  L    LF F S LI S    P+TIYDHL LHGLPIGLLPK IT+FS D ST
Sbjct: 23  TLSLNFPHFLS---LFLFLSLLIASTSSTPTTIYDHLRLHGLPIGLLPKGITQFSHDPST 82

Query: 62  GRFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPT 121
           G FQVFL+ PCNAKFEN+VHYDFNVSG LS+G+I EL+G+S+QELFLWFPVKGIRVD+P+
Sbjct: 83  GHFQVFLEHPCNAKFENQVHYDFNVSGTLSFGRIGELSGVSAQELFLWFPVKGIRVDVPS 142

Query: 122 SGVIHFDVGVVDKQFSLSPFESPLDCTAAD 150
           SG+I+FDVGVVDKQFSLS FESP DC A D
Sbjct: 143 SGLIYFDVGVVDKQFSLSLFESPPDCAAVD 169

[Close]

BLAST of Cla004130 vs. NCBI nr
Match: gi|703116813|ref|XP_010101226.1| (hypothetical protein L484_005575 [Morus notabilis])

HSP 1 Score: 204.1 bits (518), Expect = 1.9e-49
Identity = 101/148 (68.24%), Postives = 118/148 (79.73%), Query Frame = 1


Query: 3   LSLSSPFSLLPLILFFFASPLIG-SPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGR 62
           L L+ P  L  L+L  FA+     +  P+TIYD+L LH LPIGL PK IT FS D STG 
Sbjct: 17  LFLAFPHFLFALLLILFAAASAALAAAPTTIYDYLRLHDLPIGLFPKGITEFSHDPSTGY 76

Query: 63  FQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTSG 122
           FQV L+QPCNAKFEN+VHYDFNVSG LS+GQI  L+G+++QELFLWFPVKGIRVD+P+SG
Sbjct: 77  FQVLLNQPCNAKFENQVHYDFNVSGTLSFGQIGNLSGVTAQELFLWFPVKGIRVDVPSSG 136

Query: 123 VIHFDVGVVDKQFSLSPFESPLDCTAAD 150
           +I+FDVGVVDKQFSLS FESP DCTA D
Sbjct: 137 LIYFDVGVVDKQFSLSLFESPPDCTAVD 164

The following BLAST results are available for this feature:

BLAST of Cla004130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN19_CUCSA	3.8e-73	84.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1	[more]
W9S3W1_9ROSA	1.3e-49	68.24	Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1	[more]
A0A067K3P8_JATCU	2.5e-48	64.83	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1	[more]
B9RM55_RICCO	1.3e-44	60.81	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1077750 PE=4 SV=1	[more]
A0A061EYN1_THECC	2.8e-44	64.63	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1	[more]

BLAST of Cla004130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082203\|ref\|XP_008441718.1\|	8.4e-74	86.39	PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]	[more]
gi\|449442285\|ref\|XP_004138912.1\|	5.5e-73	84.62	PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus]	[more]
gi\|1009118300\|ref\|XP_015875784.1\|	1.1e-52	72.67	PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009118302\|ref\|XP_015875785.1\|	1.1e-52	72.67	PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba]	[more]
gi\|703116813\|ref\|XP_010101226.1\|	1.9e-49	68.24	hypothetical protein L484_005575 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004130	Cla004130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 28..147 score: 2.5
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 32..140 score: 3.4
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 9..147 score: 7.19
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 5..150 score: 5.0
None	No IPR available	PANTHER	PTHR31676:SF8	SUBFAMILY NOT NAMED	coord: 5..150 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla004130	Cla97C11G216080	Watermelon (97103) v2	wmwmbB359
Cla004130	Csa2G99990	Cucumber (Chinese Long) v2	cuwmB166
Cla004130	MELO3C008555	Melon (DHL92) v3.5.1	mewmB424
Cla004130	ClCG11G009700	Watermelon (Charleston Gray)	wcgwmB106
Cla004130	CSPI02G08190	Wild cucumber (PI 183967)	cpiwmB168
Cla004130	Cucsa.189490	Cucumber (Gy14) v1	cgywmB369
Cla004130	CmaCh01G004810	Cucurbita maxima (Rimu)	cmawmB461
Cla004130	CmoCh05G008620	Cucurbita moschata (Rifu)	cmowmB765
Cla004130	CmoCh01G005170	Cucurbita moschata (Rifu)	cmowmB455
Cla004130	Lsi11G009660	Bottle gourd (USVL1VR-Ls)	lsiwmB119
Cla004130	Cp4.1LG11g07120	Cucurbita pepo (Zucchini)	cpewmB120
Cla004130	CsGy2G008450	Cucumber (Gy14) v2	cgybwmB158
Cla004130	MELO3C008555.2	Melon (DHL92) v3.6.1	medwmB412
Cla004130	CsaV3_2G010570	Cucumber (Chinese Long) v3	cucwmB177
Cla004130	Bhi06G000779	Wax gourd	wgowmB143

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004130	Wild cucumber (PI 183967)	cpiwmB160
Cla004130	Cucumber (Chinese Long) v2	cuwmB158
Cla004130	Bottle gourd (USVL1VR-Ls)	lsiwmB113
Cla004130	Cucumber (Gy14) v2	cgybwmB150
Cla004130	Cucumber (Chinese Long) v3	cucwmB169