CmaCh01G003480 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G003480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Methionyl-tRNA formyltransferase
Location	Cma_Chr01 : 1727066 .. 1735723 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCAAGCGGGATTTCCCATCTGTGAGTTTCTGAGTCACCTTCTCCATGGCTGGTTGAAAGTGGATAAACAGTGAAGAGCCAAGACGAAGCCGAAGCCCCAATCCGCCATTGAAGGAACTACATCAATGGCTTCTTCGCTCTTTTTTCGTCGCTTTTGCTGTTTACATTCAGCAACTTCTCCTTCCTCCTCCTCCTCTTCCGTTTTCTCCAAGAAGAAGCCCCTCGTTTTCCTCGGTTCTCCTCAGGTTTTCTCTTCTCTCTGCAGCTCTTTCTATTCTCCTTTCTTTGTTTAATCGGAAGAAATTCCTTTTTCCTAGGTCTCGACTACAGTTCTTGATGCTCTTTTTAACGCCTCTTTCGCCGCCGATGCAGCTTTTGAGGTATCCATTACCATTTTTCAGCCGTTGGCTCTTCAATGCAGTCTTGTATCTGGTCGATACGAATCTCTGAAATGTAATTTTGATATAACTACTGTTAATCCATTTAGGTTGCAGCTATTGTTACTCAGCCACCGTCTAGAAGAGATAGGGGGAGAAAGATGATGCCTTCTCCAGTTGCGCAATATGCTCTTGATAAAGGCTTCTCTTCTGACCTTATTCTTACACCTGAAAAAGCTGGAGAGGTAATGTTACTTTTTATTTGAAGTGAAGTTGTTGTAGATCATGTTAAGGAAGAAGTGTCATTTTAAGTTATTGCTTCTGCTTGCCATGATGATAGAAACATCTGAATTTTGAAAATGTGGAAAGTTCTAAAATATTAGCATGGTGTGAGAGTACAAGTTTACAACGCTGGGCATCAAGTTTAGCTCTTACTTTGAAGAATGACCTTGTATGTTTATTTTGTAAATGCATGATAAATTTGTTGTATTTATGAAGACTAAAAGATATGGTGGATGATCATCCATTCGCCATTGGTTACTGCTAGTCTATTTCTTTTTTATTTGTGGTAAAGAGATTTACCTAGAATTTTTTGATCAACCGTGAGATCCTACATTGGTTGAGGAGGAGAACGAAACATTCTTTATAAAGGTGTGGAAACCTCTCCCTAGTAGATGAGGGTATCACAATATAATTTATTTAATAAATGAGTGAGTTACTAACAAACAACTTCTTATTACTTGACCAAGTAGTGCCTTATCCCAGGTTTCTGATCTTTCTATACATGTTTGTTTCTCTTCCTCCTTGGCTCTTCTTATCATCACCGCTTTTGTTTCATTTTCCTCTGGCTTTTCCTGTGTATTATCCGAAATAGTCAATTCTGTGTTTTTCGATATCCAAGGTCTAAAAAGCGTTTTTATTATTCCGGGAATATCAAAAGAAGACAAAACATCTTTGGCTTGTCTGTCAAAAAAAAGATAAGAACGTACAGTTGCTTGAAGCTGTTTGCAAATACCTGTTTTACGTCTTTGACAACGCATAGAGCCTTTAATTACGTCTCGATGAAAATCCGATAGTTGGGAATATCGTAGCAAAACAATTTCGTCTGATGATTCGTCAGAATCATCAGTATTTGTGATATCAATATCGTGGTTTGTGATATCAATATCTTGATTTGTGATATCAATATCAATATCTGGATCTTCAGAGTTTAGATTGTCGGTAAAAATTACGACACGTTTGGCTTTTCTTGAACGAATTTGATGATCTTGCGCCGTCTTTTTTTTGTCTTCTTCATCTTCTTCGTCTTTTTTTTCTTGTTCTTCTTCTTTCTCCCGGCGTTCTAACTCGTCGATTAATTTGTATGACCATCGAGGAGCTTCTTTATGGATTTCTCTTAGTCCAATCGAGTTTTGAGGACTTGCTTTATCGTTGTCAGGGGTTATAATTGCATCGAATAAAAATTTGAAATATTTTATTCGATCTTCTGACTCAATTTTATCTTCAATTTGTGGGTAATTAGTATTAAGAAAGATAGTATGAATCTTATTTGTCCAAACATTCTCACTATCATTTTTTCTAGAAGTTCCATTTATCATTGAGAATGAAAAAAAACTGATTCGTCTGCAGTAAGGTCCGCTCAACAAAGGATCATATGTTTTTGGTAAATAGTCGTTTTCAGTTTCATCATTACATAATTGAGTCCTTTTTTCCAGTACATCCCCTACTCTAGCTGGGGATCCCTTATCCAGAATTTCTATTCTATTTATCAATTTTTTGTTTAAATTTTTTTTTTTTTTTTTTTGTTCATTTAGATAATTCCAAGAATTATCCAATTCATCAGGAAAAAAGTGACCAAAGATATCTTTTTTTTGTATCATTTCCAAAAAAGTTGATAGACTGGGTGGATATGTAAAAACTATTTTGTCTTTTTCGTCACTTTGGCATGTATAAAAAAAATATTGTACCATTTCAGTTCTAACAACATTTTCTAATCTGTTATTTTTTATATATCGAAGTGGACGATTCCATCATTTATAGTCGAAAAGAATAGTCACAAGAGGTTTTTCAAACTAGAAGATATCTTTTTCGTCTGTATCTAAATCTATCAGCATTTTGTAATTTTCTTTATTTCCATCCGGAGGGTAAGAAGTTTCATAAACAGGTCTTTTTATCTTTTGATAGCGTGTCCTTTTAAAGTGGAATTCATCCTTTGTTTTTTCCTTTCCATTCACTCGGATCTCTTCCGTTTCATCGATTTTGTCCGGATCCTCCTTTTCTTCCGAAAAAAGGGAAGGAGAAGTATCTTCTTCGGTGGATCCCTCTTGTTCCTGTTTAGTCCCCTCCGTTTCTTTCAGTTTCTTAGTAAGAATGGGTGACGGTATTCTGCCTAAATAGTAGACACAGGTAATAAATAAGAGAATACTAAAGATTCGAGCCATAGAATTTCTGAATTCTGACACAAGGTACTTATTAGATCTAATAGAATTATTTTGCTGTATCCAGACTAATATCAATCCAACCCATTTCATGAATAAAATGTGACCAATTAACCAACCAACAAAACTACTTGTTACAAATAACATCTTGTTGTTGCATCGAAACATAGAAATGTTGACTAATCTGACTAACATTGAACTTGGTAAAATGAAATGGTTGAATAATTGAAAAATGAGATTATTCAGGAATACACATTGAATGCTAAGATTACGCATTGAGTTTCTGGTAGTAGATCCATAATCAAAAAAGTGNCAGGTAATAAATAAGAGAATACTAAAGATTCGAGCCATAAAATTTCTGAATTCTGACACAACGTTTTAAAAACCTTGAGAGGAAACTCGAAAGGCTCCTCTCAAGGGAAAGCCCAAAGAGGACAATATCTGTTAGCTGTGGACATGGACCGTTACAAATGGTATCAGAGCTAGACATCGAGCGATGTGCCATCGAGGAGGCCGAGCCCCGAAAGGGGTGGACACGAGGTGGTGTGCCAGCAAGGACGCTGGCCCTGGACATGAGGCGGTGTGCTAGTAAGGACGTTAGGCCCTAGACATGAGACGGTGTGCTAGCAAGGACGTTGAACCCTGGACATGAGGCGGTGTGCTAGCAAGGACGCTTGGCCCCAAAGGGGGTGGATTGGAGGGTCCCACATCAATTGGAGAAGGGAATGAGTCCTAGATAGCAGATGTATTTTAAAAACCTCGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGATAATATCGGCTAGCTGTGGGCTTGGGCCGTTACATCAACCTTGTCTCATTTATTTCTTTGCACATGCACGCACAATAATACTCTCAAGGATATCCCAGTTCTATTTTTCATAAGACCTATTTTTTTTGACATATTCTCACTTCTGCCTATGATCAATGGTGACAGTTTTTAGACTTAGTTACAGTAATACTATATTTGAAACTTTTGAACCTTGTGTAACGCTCTTGTTAACGGAAAAGTTTTGTAAGCCATGTAGAATGCTCTTTTTCTTCTTATTTTCTTGCAGGACAAATTTTTGAGCACCTTAAAGGCTTTGCAACCAGAACTATGTATTACAGCAGCATATGGGAATATCTTACCGACCAAATTTCTCAATATTCCAGCATTAGGTAAACCTAAATTTCTTGTTGGTATCCAAATTAAAACACTGTCATTGGAAATACAGTCTGAACTAGAAGAGATTAGAAGAATCTTTCATGAGATGGAAAGAGAACCTGATCAAATTTGGGAGTTGATTGTTTTTCTTCTTCCTCTTGGAGTCGTCTAAATAGTCGTTTTTGTAATTATGATCCCTCAGGGACTGTCAATATTCACCCAAGTCTCTTGCCATTATATCGTGGTGCTGCACCTGTCCAACGGGCATTGCAGGTTGCTTATGCTTACAAGTTGATATTTGATACATTGAATTCTATTTAACAATGTCTTCAAGTAGTTCTAACTTGTAAGGTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCTACTTTTAGGATGGTGTTAAGGAGACTGGTGTATCACTAGCATTCACAGTTCGTGCATTGGATGCTGGACCCGTCATTGCTTTTGAAAAATTTGAAGTTGATGAGCAGATTAAGGTATGCTTGTTATGAGTTTACAGGTTAAGCAACGTGACATGCATGTGTGTTTTGATTTTTGATTCCTATAAAGCATAAATGGTTGAAATCTGAAAATCCATCACATGGTTCGTTTATAAATTTGTTTTTCATTTTCTTGCCGATCCTTTTGAGTAGAGACGTTTTTATGAAGTCGGCTATTTGTCTCATGTCTTGTCTTACACAGTTAAACTTCTTTTACATTTAACTTTTTGAAGATGGACCATTTCTTTTCTAATCTTTGATTCAATTTGCTAGCAGGCACCCGATTTACTTGCATTGCTATTTTTAGAAGGTGGGCATTCAGCGTCTGTCATGAACTTCACTTGAAATTGTGGTGCTGTCTCCTAGTCTGTTTCTTTTATTCTCTAGCATATTGGTACTTCTTAGTTTCATTGCAAAGAGTGGTGTTGATTTCAAGTACTCTTACATTTGATTATATAAATAAAATCACAACACCAAAAGTTCATCTTTGAGTTGTTGATCTAAATACTTACGTACGTTTTGTTACGGTTTATAATACTTAAACATTCAAAATCCACTTTCATGTGCAGGCTCAAAACTTTTGATTCGGGAACTTCCTTCTATACTTGATGGATCTGCTGAAAAGAAGGCACAACCTCAAGACGAATCTAAAGCTACCAAGGCTCCAAAGGTATCCTTGGTTGAGATCTTCTAGGATAAATTTATAATCATATAGAAACGAAGTGAATTTTGGTTTATATATGCTTAGTCCGTTACTCATTTGATCTTCCAATATATTAGTAACAAAAATTTCGTATTCATTCTTTTCTGATTAGTTAAAAATGATTTAGATCAACCTTAAAGCAAAACGAAAACTAGAATTCCATGAACTATTAGTATCAATTTTTTAGTTTTATTTAAAATAACAATCATAATATCAGCAATCTTGTATATCAAGAAAACCTTCTGATAATGATGCATTGTAGATTCAAGTTCTCTGGAATCTGACTCTAGTTATGCAGATAGCTCCAGATGAGGCATGGCTGTCATTTGATCAAGAGGCATATGTTCTACACAACAAGGTAATTTTACCCTTTTCTTTGTTCAACCTTGCAGTTAAATCATGCACTCCCTTTAGGTTCGCGCATTTGCAGGATGGCCTGGAACACGAGCGAAGGTTGTCGTTGCTGATGAGAAAAGCGGTTGCCACAATATCCTAGAATTTAAAATCATTACTACAAGGGTTGGCATTCAGGAGACTCAAGCAGATGAGATCTGCTTTGTCAAGGATGCTTTGCTGTTTCCATGTGGAGGGCGCACGGCACTTGAGGTTTGTTCCTTATTGTAGCCTATTTCTATTATGCTTATATGGATGTGTATGATCAAGGGCTGGGTATTTTTTCTTAGTTCAGTTGCATTTTTCTTTGAATAGAGCTTTTCGTTAAGATGTTAGAAGGTCGCAAAGTTTCATATGAAATTCATAAAAACTCACATCAAACCTCATAAACCTCCCAGAATACAAGTTTTGTAGCCACCCACAGTTCCTTAATTACAAAAGAGCTCCCTCTTATGACCCTATGAATCAATTAGAGCCTTAGTATAGTTTTACGTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTTAACAGACACATTTTAAAAATCTTGAGGGAAAGCTCGAAAGGGAAAGCCCAAAGAAAACAATATTTGCTAGCAGTGGACTTAGGCCGTTACAAATGGTATCAGAAGGGGGTGGATTGGAAGTCCTATATTGATTGGAGAAGGGAACGATGCTGGGTCCTGAAGGGAGTTCTACATCAGTAAGTTGTCTCCAACAATAACGGAAATAAAAAAACAAGCTTAACACATTATCAAGAACACATCCACACAATCCACCCACTCCTTAGTAGCACCCCTCAAAATCTTAGCATTTGTTTCCAACCATAAATTGCATAAGATTGCTTTTATGACATTTCTACACAATTTCTTTGCCCTTTCTTCAAGAAGAGTTCCACGTAGCACATTTCTTTCACATAATGGTTACTTAGATTTTTCACTTTGTTGATACTGTTATATCTTCACTTGTTCTTTAAAATATACATCATATTTTTACCTGTACTGAAGATAAGTTATTACTATTTTGCACCAACATTTTTACTGTAGTGATTTGGTAATTTCACCAGGTACTGGAAGTTCAATTACCTGGAAAAAAGGTTGTGAGTGCAGGCGCCTTCTGGAATGGTATGCAAGGGAAAAGGTTGAAGAAATTTGATGAAACTAAACATTTTTCGCACGTGTCCGTGTGATATTTAGATGTAATCTAGCTGAAAAAAAGTTGACGATCGTAAACAAATTTTGCACGTGTTGTGATATTATTTATATGTAGTCGAGGCGAAGAAATTTGTTGAATGCCAAAGCATAATCAATTCTATCAAGAGATCCATATCGAAATTTTAAGAATCAATTAGAAATTAAGTTCAAATTTTAAATACTAAATAAAAACTAAATTTAAATCCCAAAAATAAAAAGATTAGTCTTCTTAATTTCTAAATTTTTTTAATTTTAATTTTAATTTTTTTAATTTTTTTAATTTTTTTAATTTAGGACTTAAGTGGGTGTCAACTTTTAATCATGGTATTAGAATATATACCAGAAATTAGATAAGACATATCAGAATTTTTAGGCATGAAAGAAGCCATAACTTGGAATTTTTAGGTATAAAAGAAGCCATAACTTGGAATTTTTAGGTATAAAAGAAGCCATAACTTTAAACCTACCTTTATGAAAGTGGTAATAGCAAATAGAAAAAGAAACTCTTACAAACTAGATTGTTACCCTACTCGACCACTTGCCTATTTCTACTTATGGACAACTATTACACTGTTTCACTCAATCTATATTCGTTTTGCCCATTTCTACCTATGGATAATTACTATACTGCTTCACTTAACCTATGCTCGTCGTGCCTATTTTTACCTACGGTCAACTACTAGACCGCCTCACTCAATCTATGCTCGTCTTCCCTATTATTATCTATAGACAGCTACTAGACCGCTTCACTCAATCTATGCTCTTGTTTCACAATTATTTAAAGCAAAAAATAAATAAAATAAATAAAAAATCTCATTAAACAAACATATAATAATTTAAAAACAAATTAGCGAAAATATTACTCTTTTTTTTTTTTTTTTTTTACTTATCATTAAATTAAATTAAGCTTATTTAAAAGGATGGCACCTCTCTTCTACATGAGCTAAGCCTCTCAAGTCTCTTTGGTTTTTCTTTGGAAAGGGAAAAAAAAATGGGAGCTCTTGATTATCTCTCCAACTTTTGCATTCTCACACCAACAAGAACCAAGCACAAACCAATGCAGGTAGCTCTTGATTTTTGGGTCTATTTAATTTGAATTTGTTCGTGTTTTTCGTTTATATTATATGCGTTTTTAGACGGTCGAAATCAAAGTGAAGCTGGATTGTGACGGATGTGAAAGAAGAGTTCGAAACGCTGTCTCTTCTATGAAAGGTCTTGTTCTTTCTCTCGTTCGTCGTTTTATCAAATAATGACGTTTCTCAATTTTACATGTAAGCTATTGTTATATTATCATTTATCGAGTTTGAAAACCCGACCCGAGTATTTATCGATGTATAGGCGTGAAGACGGTGGAGATGATGAGAAAGCAACACAGGGTGAGGGTTAGTGGGTATGTTGATGCCCAAAAAGTGCTTAAGAGAGTAAAAAGCACTGGAAAAAGAGCCGAGTTTTGGCCTTATATTCCTCAACATCTTGTTCATTACCCTTACGCCTTAGGTGCTTATGACAAGAAAGCTCCTGCTGGGTTTGTTAGGAATGTTGTGCAAGCTTTTCCATCTGCTCATGAACAAAACTATGCCTCTATTTTTAGTGATGACAATGTTCATGCTTGTTCTATCATGTAGCTCTTTTTGTCGAACGTGTTCGATCGGACATGACGAGTTTGAACGTATAAAGCGTTGAATTTGTTCGAGTTCGTCAATTGAG

mRNA sequence

AATCCAAGCGGGATTTCCCATCTGTGAGTTTCTGAGTCACCTTCTCCATGGCTGGTTGAAAGTGGATAAACAGTGAAGAGCCAAGACGAAGCCGAAGCCCCAATCCGCCATTGAAGGAACTACATCAATGGCTTCTTCGCTCTTTTTTCGTCGCTTTTGCTGTTTACATTCAGCAACTTCTCCTTCCTCCTCCTCCTCTTCCGTTTTCTCCAAGAAGAAGCCCCTCGTTTTCCTCGGTTCTCCTCAGGTCTCGACTACAGTTCTTGATGCTCTTTTTAACGCCTCTTTCGCCGCCGATGCAGCTTTTGAGGTTGCAGCTATTGTTACTCAGCCACCGTCTAGAAGAGATAGGGGGAGAAAGATGATGCCTTCTCCAGTTGCGCAATATGCTCTTGATAAAGGCTTCTCTTCTGACCTTATTCTTACACCTGAAAAAGCTGGAGAGGACAAATTTTTGAGCACCTTAAAGGCTTTGCAACCAGAACTATGTATTACAGCAGCATATGGGAATATCTTACCGACCAAATTTCTCAATATTCCAGCATTAGGGACTGTCAATATTCACCCAAGTCTCTTGCCATTATATCGTGGTGCTGCACCTGTCCAACGGGCATTGCAGGATGGTGTTAAGGAGACTGGTGTATCACTAGCATTCACAGTTCGTGCATTGGATGCTGGACCCGTCATTGCTTTTGAAAAATTTGAAGTTGATGAGCAGATTAAGCATAAATGGTTGAAATCTGAAAATCCATCACATGGCTCAAAACTTTTGATTCGGGAACTTCCTTCTATACTTGATGGATCTGCTGAAAAGAAGGCACAACCTCAAGACGAATCTAAAGCTACCAAGGCTCCAAAGATTCAAGTTCTCTGGAATCTGACTCTAGTTATGCAGATAGCTCCAGATGAGGCATGGCTGTCATTTGATCAAGAGGCATATGTTCTACACAACAAGGTTCGCGCATTTGCAGGATGGCCTGGAACACGAGCGAAGGTTGTCGTTGCTGATGAGAAAAGCGGTTGCCACAATATCCTAGAATTTAAAATCATTACTACAAGGGTTGGCATTCAGGAGACTCAAGCAGATGAGATCTGCTTTGTCAAGGATGCTTTGCTGTTTCCATGTGGAGGGCGCACGGCACTTGAGGTACTGGAAGTTCAATTACCTGGAAAAAAGGTTGTGAGTGCAGGCGCCTTCTGGAATGGCGTGAAGACGGTGGAGATGATGAGAAAGCAACACAGGGTGAGGGTTAGTGGGTATGTTGATGCCCAAAAAGTGCTTAAGAGAGTAAAAAGCACTGGAAAAAGAGCCGAGTTTTGGCCTTATATTCCTCAACATCTTGTTCATTACCCTTACGCCTTAGGTGCTTATGACAAGAAAGCTCCTGCTGGGTTTGTTAGGAATGTTGTGCAAGCTTTTCCATCTGCTCATGAACAAAACTATGCCTCTATTTTTAGTGATGACAATGTTCATGCTTGTTCTATCATGTAGCTCTTTTTGTCGAACGTGTTCGATCGGACATGACGAGTTTGAACGTATAAAGCGTTGAATTTGTTCGAGTTCGTCAATTGAG

Coding sequence (CDS)

ATGGCTTCTTCGCTCTTTTTTCGTCGCTTTTGCTGTTTACATTCAGCAACTTCTCCTTCCTCCTCCTCCTCTTCCGTTTTCTCCAAGAAGAAGCCCCTCGTTTTCCTCGGTTCTCCTCAGGTCTCGACTACAGTTCTTGATGCTCTTTTTAACGCCTCTTTCGCCGCCGATGCAGCTTTTGAGGTTGCAGCTATTGTTACTCAGCCACCGTCTAGAAGAGATAGGGGGAGAAAGATGATGCCTTCTCCAGTTGCGCAATATGCTCTTGATAAAGGCTTCTCTTCTGACCTTATTCTTACACCTGAAAAAGCTGGAGAGGACAAATTTTTGAGCACCTTAAAGGCTTTGCAACCAGAACTATGTATTACAGCAGCATATGGGAATATCTTACCGACCAAATTTCTCAATATTCCAGCATTAGGGACTGTCAATATTCACCCAAGTCTCTTGCCATTATATCGTGGTGCTGCACCTGTCCAACGGGCATTGCAGGATGGTGTTAAGGAGACTGGTGTATCACTAGCATTCACAGTTCGTGCATTGGATGCTGGACCCGTCATTGCTTTTGAAAAATTTGAAGTTGATGAGCAGATTAAGCATAAATGGTTGAAATCTGAAAATCCATCACATGGCTCAAAACTTTTGATTCGGGAACTTCCTTCTATACTTGATGGATCTGCTGAAAAGAAGGCACAACCTCAAGACGAATCTAAAGCTACCAAGGCTCCAAAGATTCAAGTTCTCTGGAATCTGACTCTAGTTATGCAGATAGCTCCAGATGAGGCATGGCTGTCATTTGATCAAGAGGCATATGTTCTACACAACAAGGTTCGCGCATTTGCAGGATGGCCTGGAACACGAGCGAAGGTTGTCGTTGCTGATGAGAAAAGCGGTTGCCACAATATCCTAGAATTTAAAATCATTACTACAAGGGTTGGCATTCAGGAGACTCAAGCAGATGAGATCTGCTTTGTCAAGGATGCTTTGCTGTTTCCATGTGGAGGGCGCACGGCACTTGAGGTACTGGAAGTTCAATTACCTGGAAAAAAGGTTGTGAGTGCAGGCGCCTTCTGGAATGGCGTGAAGACGGTGGAGATGATGAGAAAGCAACACAGGGTGAGGGTTAGTGGGTATGTTGATGCCCAAAAAGTGCTTAAGAGAGTAAAAAGCACTGGAAAAAGAGCCGAGTTTTGGCCTTATATTCCTCAACATCTTGTTCATTACCCTTACGCCTTAGGTGCTTATGACAAGAAAGCTCCTGCTGGGTTTGTTAGGAATGTTGTGCAAGCTTTTCCATCTGCTCATGAACAAAACTATGCCTCTATTTTTAGTGATGACAATGTTCATGCTTGTTCTATCATGTAG

Protein sequence

MASSLFFRRFCCLHSATSPSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFAADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSGCHNILEFKIITTRVGIQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSAGAFWNGVKTVEMMRKQHRVRVSGYVDAQKVLKRVKSTGKRAEFWPYIPQHLVHYPYALGAYDKKAPAGFVRNVVQAFPSAHEQNYASIFSDDNVHACSIM

Homology

[Close]

BLAST of CmaCh01G003480 vs. Swiss-Prot
Match: FMT_BACLD (Methionyl-tRNA formyltransferase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) GN=fmt PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.3e-40
Identity = 115/347 (33.14%), Postives = 172/347 (49.57%), Query Frame = 1


Query: 33  LVFLGSPQVSTTVLDALFNASFAADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKG 92
           +VF+G+P  S  VL  L       D  +EV  +VTQP   + R + M P PV + AL +G
Sbjct: 4   IVFMGTPDFSVPVLGTLI------DDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRRG 63

Query: 93  FSSDLILTPEKAGEDKFLSTLKALQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPL 152
                +L PEK  E+     + AL+P+L +TAA+G ILP K L+ P  G +N+H SLLP 
Sbjct: 64  IP---VLQPEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPE 123

Query: 153 YRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGS 212
            RG AP+  A+ +G ++TGV++ + V  LDAG ++A  + +++E      L  +    G+
Sbjct: 124 LRGGAPIHYAILEGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGA 183

Query: 213 KLLIRELPSILDGSAEKKAQPQDESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYV 272
            LL   +P I+DGS     + QDE KAT AP I+             ++  + + +   V
Sbjct: 184 ALLSETVPRIIDGSV--TPEKQDEQKATYAPNIK------------REQELIDWSKPGEV 243

Query: 273 LHNKVRAFAGWP-------GTRAKVVVADEKSGCHNILEFKIITTRVGIQETQADEICFV 332
           L+N+VR    WP       G   KV  A +   C              +++ +  EI  V
Sbjct: 244 LYNQVRGLNPWPVAYTVLNGQTLKVWAAKK---CQ------------ALKQAEPGEIVTV 303

Query: 333 -KDALLFPCGGRTALEVLEVQLPGKKVVSAGAFWNGVKTVEMMRKQH 372
            KD ++   G  TAL++ EVQ  GKK + A  F  G      M+  H
Sbjct: 304 EKDGIVVATGNDTALKLTEVQPAGKKRMKAEDFVRGAGLQAGMKLGH 312

[Close]

BLAST of CmaCh01G003480 vs. Swiss-Prot
Match: FMT_STACT (Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain TM300) GN=fmt PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-39
Identity = 103/328 (31.40%), Postives = 166/328 (50.61%), Query Frame = 1


Query: 33  LVFLGSPQVSTTVLDALFNASFAADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKG 92
           ++F+G+P  ST VL+ L        A  +V A+VTQP     R R M P PV + AL+ G
Sbjct: 4   VIFMGTPDFSTKVLEMLI-------AEEDVIAVVTQPDRPVGRKRVMTPPPVKEVALENG 63

Query: 93  FSSDLILTPEKAGEDKFLSTLKALQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPL 152
                +  PEK  +   L TL  ++P+L +TAA+G ILP   L+ P LG +N+H SLLP 
Sbjct: 64  IE---VYQPEKISQSDDLQTLIDMEPDLIVTAAFGQILPKSLLDAPKLGAINVHASLLPK 123

Query: 153 YRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGS 212
           YRG AP+ +A+ DG KETGV++ +    LDAG +I+ +  E++     + +  +    G+
Sbjct: 124 YRGGAPIHQAIIDGEKETGVTIMYMAPKLDAGDIISQQAIEIEANDNVESMHDKLSFLGA 183

Query: 213 KLLIRELPSILDGSAEKKAQPQDESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYV 272
            LL + LP I++G+ ++ AQ  D++              T    I+ ++  + + Q A  
Sbjct: 184 DLLKKTLPEIINGTNDRIAQDDDKA--------------TFASNISREDERIDWTQSAEQ 243

Query: 273 LHNKVRAFAGWPGTRAKVVVADEKSGCHNILEFKIITTRVGIQETQADEICFVKDALLFP 332
           ++N +R  + WP    K+   + K     I E        G +    + +   K A++  
Sbjct: 244 VYNHIRGLSPWPVAYTKLDDTNMKLYAARIEE--------GKKGNPGEILETTKKAIIVG 299

Query: 333 CGGRTALEVLEVQLPGKKVVSAGAFWNG 361
            G   A+ + E+QL GKK +    F +G
Sbjct: 304 TGSDDAIALTEIQLSGKKRMPTANFLSG 299

[Close]

BLAST of CmaCh01G003480 vs. Swiss-Prot
Match: FMT_MOOTA (Methionyl-tRNA formyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=fmt PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.8e-38
Identity = 113/334 (33.83%), Postives = 163/334 (48.80%), Query Frame = 1


Query: 33  LVFLGSPQVSTTVLDALFNASFAADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKG 92
           LVF+G+P  +   L AL        A  E AA++TQP   R RG+K++P PV   AL  G
Sbjct: 3   LVFMGTPDFAVPSLQAL------VAAGHEFAAVITQPDRPRGRGKKLLPPPVKSTALAAG 62

Query: 93  FSSDLILTPEKAGEDKFLSTLKALQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPL 152
                +  P    + +FL  L+ LQPEL +  A+G IL  + L++PA G VN+H SLLP 
Sbjct: 63  LP---VRQPSDMKDREFLEDLRLLQPELIVVVAFGRILSREILDLPARGCVNLHASLLPR 122

Query: 153 YRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGS 212
           YRGAAP+ RA+ +G  ETGV+  +    LDAG +I  EK  +  +     +       G+
Sbjct: 123 YRGAAPIHRAVMNGEVETGVTTMWMAPQLDAGDIILQEKLPIPPEATTGEIHDRLAEVGA 182

Query: 213 KLLIRELPSILDGSAEKKAQPQDESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYV 272
            LL+  L  I    A +   PQDE+ AT AP ++            P+E  + ++Q A V
Sbjct: 183 GLLVHTLELIAASRAPR--LPQDEALATYAPPLK------------PEEEVIHWEQPAQV 242

Query: 273 LHNKVRAFAGWPGTRAKVVVADEKSGCHNILEFKIITTRVGIQET--QADEICFVKDALL 332
           ++N++R    WPG  A  + + E+         KI   R+       +A  +  V     
Sbjct: 243 IYNQIRGLNPWPG--AYTLRSGER--------LKIYGARLTDPSAIGRAGRVVEVGREGF 302

Query: 333 FPCGGRTALEVLEVQLPGKKVVSAGAFWNGVKTV 365
               G   L V  VQ PGKK++ A A+  G   V
Sbjct: 303 VVQAGTGRLLVTSVQPPGKKIMPASAYLQGYPMV 303

[Close]

BLAST of CmaCh01G003480 vs. Swiss-Prot
Match: FMT_KOSOT (Methionyl-tRNA formyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=fmt PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-37
Identity = 104/321 (32.40%), Postives = 161/321 (50.16%), Query Frame = 1


Query: 33  LVFLGSPQVSTTVLDALFNASFAADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKG 92
           +VF+G+P  +   L  L       +  + V  + +QP   + RG+K++P+PV Q A + G
Sbjct: 3   IVFMGTPDFAAEHLRKL------VEKKYNVVGVFSQPDKPKGRGKKLIPTPVKQVAREYG 62

Query: 93  FSSDLILTPEKAGEDKFLSTLKALQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPL 152
                +  P+   + +    LK L+P++ IT AYG +L  +   +P LG  N+H SLLP 
Sbjct: 63  IP---VFQPKSVNKGEGFEALKELKPDIIITVAYGKLLKQQVFELPPLGCYNVHASLLPK 122

Query: 153 YRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGS 212
           YRGAAP+QRAL++G KETG+++      +D+GP+   E+ E+        LK +  + G 
Sbjct: 123 YRGAAPIQRALENGEKETGITIFKIDEGMDSGPIALQERIEISSDDNFGTLKKKLCNLGK 182

Query: 213 KLLIRELPSILDGSAEKKAQPQDESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYV 272
           KLLI  L  I  G  E K  PQD S+AT APKI              D   + FD    V
Sbjct: 183 KLLIEFLKKISAG--EIKLTPQDHSQATYAPKI-----------TKEDTILIEFDNGERV 242

Query: 273 LHNKVRAFAGWPGTRAKVVVADEKSGCHNILEFKIITTRVGIQETQADEICFVKDALLFP 332
             NK+RA+   PG   ++     K     I +   +    G        I   KD+++  
Sbjct: 243 F-NKIRAYDPEPGVTTRLGELRVKLFGAGICDNCCVDAEPG------QIISISKDSMVVA 293

Query: 333 CGGRTALEVLEVQLPGKKVVS 354
           C  + A+++ ++Q PGKKV++
Sbjct: 303 C-KKGAVKISKIQFPGKKVIT 293

[Close]

BLAST of CmaCh01G003480 vs. Swiss-Prot
Match: FMT_STAEQ (Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fmt PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-37
Identity = 102/330 (30.91%), Postives = 167/330 (50.61%), Query Frame = 1


Query: 33  LVFLGSPQVSTTVLDALFNASFAADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKG 92
           ++F+G+P  ST VL+ L        A  EV A+VTQP     R + M P PV + A    
Sbjct: 4   IIFMGTPDFSTKVLEMLI-------AEHEVIAVVTQPDRPVGRKKVMTPPPVKRVATKHQ 63

Query: 93  FSSDLILTPEKAGEDKFLSTLKALQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPL 152
                +  PEK  + + L  L +L+ +L +TAA+G +LP   LN P LG +N+H SLLP 
Sbjct: 64  IP---VYQPEKLKDSQELDVLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPK 123

Query: 153 YRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGS 212
           YRG AP+ +A+ DG +ETG+++ + V+ LDAG +I+ +   ++E+     +  +    G+
Sbjct: 124 YRGGAPIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGA 183

Query: 213 KLLIRELPSILDGSAEKKAQPQDESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYV 272
           +LL + LPSI+D + +  + PQD++ AT A  I+             ++  + ++  A  
Sbjct: 184 ELLKKTLPSIIDNTND--SIPQDDALATFASNIR------------REDERIDWNMSAQA 243

Query: 273 LHNKVRAFAGWPGTRAKVVVADEKSGCHNILEFKIITTRVGIQETQADEICFVKDALLFP 332
           +HN +R  + WP       VA       N+  F     + G +      I   K  L+  
Sbjct: 244 IHNHIRGLSPWP-------VAYTTMNEKNLKLFSAFIVK-GKKGNPGTIIEATKHELIIA 301

Query: 333 CGGRTALEVLEVQLPGKKVVSAGAFWNGVK 363
            G   A+ + E+Q  GKK +    + +GV+
Sbjct: 304 TGSDDAIALTEIQPAGKKRMKVTDYLSGVQ 301

[Close]

BLAST of CmaCh01G003480 vs. TrEMBL
Match: D7TSU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01830 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 1.2e-137
Identity = 267/369 (72.36%), Postives = 300/369 (81.30%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATSPSSSSSSVF---SKKKPLVFLGSPQVSTTVLDALFNASFAAD 60
           M SSL  RRF  L++ +S SSS S+     SK+K LVFLGSPQVS  VLD LFNAS A D
Sbjct: 28  MNSSLMLRRFFTLNATSSSSSSCSASLKPPSKRKQLVFLGSPQVSAAVLDDLFNASTAPD 87

Query: 61  AAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQ 120
           + FEVAAIVTQPPS R+RGRK+MPSPVAQ+ALD+GF SDLI TPEKAGE+ FLS+L+ALQ
Sbjct: 88  SMFEVAAIVTQPPSGRNRGRKVMPSPVAQHALDRGFPSDLIFTPEKAGEEIFLSSLRALQ 147

Query: 121 PELCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFT 180
           PELCITAAYGNILP KFL IP +GTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFT
Sbjct: 148 PELCITAAYGNILPRKFLEIPPMGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFT 207

Query: 181 VRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDES 240
           VRALDAGPVIA E+FEVD+QIK   L +   S GSKLLI ELPSI DGSA  KAQPQD+S
Sbjct: 208 VRALDAGPVIACERFEVDDQIKATDLLALLFSQGSKLLIHELPSIFDGSANLKAQPQDDS 267

Query: 241 KATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKS 300
           KAT APKI             P+E+WLSFDQEA VLHNKVRAFAGWPGTRAKVVV D+K+
Sbjct: 268 KATLAPKI------------TPEESWLSFDQEASVLHNKVRAFAGWPGTRAKVVVIDDKN 327

Query: 301 GCHNILEFKIITTRV----GIQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVS 360
           G HN+L+ KIITTRV     IQ  +AD++ F+KDAL+FPC G +ALEVLEVQLPGKKVV+
Sbjct: 328 GEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKDALVFPCSGSSALEVLEVQLPGKKVVN 384

Query: 361 AGAFWNGVK 363
           A AFWNG++
Sbjct: 388 AAAFWNGLR 384

[Close]

BLAST of CmaCh01G003480 vs. TrEMBL
Match: A0A0B0N7U7_GOSAR (Methionyl-tRNA formyltransferase OS=Gossypium arboreum GN=F383_13374 PE=3 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 1.5e-137
Identity = 266/372 (71.51%), Postives = 300/372 (80.65%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATS-----PSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFA 60
           M S    RRF C ++A S     PSSS++++ SKKK LVFLGSPQVS TVLDALFNAS A
Sbjct: 1   MYSPSMLRRFFCFNAAASSSSITPSSSTTTITSKKKSLVFLGSPQVSATVLDALFNASAA 60

Query: 61  ADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKA 120
             ++FEV AIVTQPPSRRDRGRK+MPSPVAQYALD+GF SDLI TPE+AGE+ FLS L+A
Sbjct: 61  PSSSFEVTAIVTQPPSRRDRGRKVMPSPVAQYALDRGFPSDLIFTPERAGEETFLSNLRA 120

Query: 121 LQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLA 180
           LQPELCITAAYGNILPTKFLNIP LGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLA
Sbjct: 121 LQPELCITAAYGNILPTKFLNIPPLGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLA 180

Query: 181 FTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQD 240
           FTVRALDAGPVIA E+ EVD+QIK   L +   S GSKLLI +LPSI DGSA+  A+PQD
Sbjct: 181 FTVRALDAGPVIARERIEVDDQIKAPDLLALLFSEGSKLLICKLPSIFDGSAKVNAEPQD 240

Query: 241 ESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKV-VVAD 300
           +SK T APK           +I+P+E+WLSFD+EA +LHNKVRAFAGWPGTRAKV V+ D
Sbjct: 241 DSKVTLAPK----------ARISPEESWLSFDEEALILHNKVRAFAGWPGTRAKVLVIDD 300

Query: 301 EKSGCHNILEFKIITTRVG----IQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKK 360
           E S  HNILE KIITTRVG    I++    ++ FVKDAL+FPCGG T LEVLEVQLPGKK
Sbjct: 301 ESSNNHNILELKIITTRVGSNDKIRDNDVHDVAFVKDALVFPCGGCTDLEVLEVQLPGKK 360

Query: 361 VVSAGAFWNGVK 363
           V SA AFWNG++
Sbjct: 361 VTSAAAFWNGLR 362

[Close]

BLAST of CmaCh01G003480 vs. TrEMBL
Match: A0A0D2N7B6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G085900 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 5.8e-137
Identity = 266/372 (71.51%), Postives = 299/372 (80.38%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATS-----PSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFA 60
           M S+   RRF   ++A S     PSS ++++ SKKK LVFLGSPQVS TVLDALFNAS A
Sbjct: 1   MYSTSMLRRFFFFNAAASSSSITPSSYTTTITSKKKSLVFLGSPQVSATVLDALFNASAA 60

Query: 61  ADAAFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKA 120
             ++FEV AIVTQPPSRRDRGRK+MPSPVAQYALD+GF SDLI TPE+AGE+ FLS L+A
Sbjct: 61  PSSSFEVTAIVTQPPSRRDRGRKVMPSPVAQYALDRGFPSDLIFTPERAGEETFLSNLRA 120

Query: 121 LQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLA 180
           LQPELCITAAYGNILPTKFLNIP LGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLA
Sbjct: 121 LQPELCITAAYGNILPTKFLNIPPLGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLA 180

Query: 181 FTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQD 240
           FTVRALDAGPVIA E+ EVD+QIK   L +   S GSKLLI +LPSI DGSAE  A+PQD
Sbjct: 181 FTVRALDAGPVIARERVEVDDQIKAPDLLALLFSEGSKLLICKLPSIFDGSAEVNAEPQD 240

Query: 241 ESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKV-VVAD 300
           +SK T APKI            +P+E+WLSFD+EA +LHNKVRAFAGWPGTRAKV V+ D
Sbjct: 241 DSKVTLAPKI------------SPEESWLSFDEEALILHNKVRAFAGWPGTRAKVLVIDD 300

Query: 301 EKSGCHNILEFKIITTRVG----IQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKK 360
           E S  HNILE KIITTRVG    I++    +I F+KDAL+FPCGGRT LEVLEVQLPGKK
Sbjct: 301 ESSNNHNILELKIITTRVGSNDKIRDNDVHDIAFIKDALVFPCGGRTDLEVLEVQLPGKK 360

Query: 361 VVSAGAFWNGVK 363
           V SA AFWNG++
Sbjct: 361 VTSAAAFWNGLR 360

[Close]

BLAST of CmaCh01G003480 vs. TrEMBL
Match: A0A061EG82_THECC (Formyltransferase, putative isoform 1 OS=Theobroma cacao GN=TCM_019284 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 7.6e-137
Identity = 264/367 (71.93%), Postives = 298/367 (81.20%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATSPSSSS-SSVFSKKKPLVFLGSPQVSTTVLDALFNASFAADAA 60
           M SSL  RRF C ++A+S S ++ SS  SKKK LVFLGSPQVS TVLDALFNAS A  ++
Sbjct: 1   MCSSLMLRRFFCFNAASSSSVAAVSSSTSKKKSLVFLGSPQVSATVLDALFNASAAPSSS 60

Query: 61  FEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQPE 120
           FEVAAIVTQPPSRR+RGRKMMPSPVAQYALD+GF SDLI TP++AGE+ FLS+L  LQPE
Sbjct: 61  FEVAAIVTQPPSRRERGRKMMPSPVAQYALDRGFPSDLIFTPQRAGEEAFLSSLTTLQPE 120

Query: 121 LCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVR 180
           LCITAAYGNILPT+FLNIP+LGTVNIHPSLLPLYRGAAPVQRALQDGVK TGVSLAFTVR
Sbjct: 121 LCITAAYGNILPTRFLNIPSLGTVNIHPSLLPLYRGAAPVQRALQDGVKGTGVSLAFTVR 180

Query: 181 ALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESKA 240
           ALDAGPVIA  + EVD+QIK   L +   S GSKLLI +LPSI DGSA+  A+PQD+SKA
Sbjct: 181 ALDAGPVIARGRLEVDDQIKAPDLLALLFSEGSKLLISKLPSIFDGSAKVHAEPQDDSKA 240

Query: 241 TKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSGC 300
           T APKI             P+E+WLSFD EA VLHNKVRAFAGWPGTRAK+ V ++KS  
Sbjct: 241 TLAPKI------------TPEESWLSFDDEALVLHNKVRAFAGWPGTRAKIFVVNDKSSS 300

Query: 301 HNILEFKIITTRVG----IQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSAG 360
           HNILE KIITTRVG    IQ    ++I FVK AL+FPCGG TALEVLEVQLPGKKV++A 
Sbjct: 301 HNILELKIITTRVGPADNIQGNDVNDIAFVKGALVFPCGGCTALEVLEVQLPGKKVITAA 355

Query: 361 AFWNGVK 363
           AFWNG++
Sbjct: 361 AFWNGLR 355

[Close]

BLAST of CmaCh01G003480 vs. TrEMBL
Match: A0A067F728_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048078mg PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.2e-134
Identity = 262/365 (71.78%), Postives = 292/365 (80.00%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHS-ATSPSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFAADAA 60
           M SSL  RRF C    ATS ++ S+   S+KKPLVFLGSPQVS  VLDALFNAS + D+ 
Sbjct: 19  MNSSLMIRRFFCFKGPATSSTTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSI 78

Query: 61  FEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQPE 120
           FEVAAIVTQPPSRRDRGRK++PSPVAQYALD+GF +DLI TPE+AGED FLS L+ALQPE
Sbjct: 79  FEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPE 138

Query: 121 LCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVR 180
           LCITAAYGNILP+KFLNIP +GTVNIHPSLLPLYRGAAPVQRALQ G KETGVSLAFTVR
Sbjct: 139 LCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVR 198

Query: 181 ALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESKA 240
           ALDAGPVIA EK EVD+QIK   L     S GS+LLIRELPSILDGSA  KAQPQD+SKA
Sbjct: 199 ALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKA 258

Query: 241 TKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSGC 300
           T APK            I  +E+WLSFD+EA VLHNKVRAFAGWPGTRAK+ V D+++G 
Sbjct: 259 TLAPK------------ITTEESWLSFDEEAVVLHNKVRAFAGWPGTRAKMAVVDDRNGQ 318

Query: 301 HNILEFKIITTRV--GIQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSAGAF 360
            +I+E KIITTRV   IQ  + D I F KDAL+ PCG  TALEVLEVQLPGKK VSA AF
Sbjct: 319 QSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAF 371

Query: 361 WNGVK 363
           WNG++
Sbjct: 379 WNGLR 371

[Close]

BLAST of CmaCh01G003480 vs. TAIR10
Match: AT1G66520.1 (AT1G66520.1 formyltransferase, putative)

HSP 1 Score: 479.9 bits (1234), Expect = 1.7e-135
Identity = 252/362 (69.61%), Postives = 292/362 (80.66%), Query Frame = 1


Query: 5   LFFRRFCCLHSATSPSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFAADAAFEVAA 64
           +  RRF C +++++ SS + S   KKKPL+FLGSPQVS +VL+ALFNAS A +++FEVA 
Sbjct: 1   MILRRFICYNASSTVSSIAPS--PKKKPLIFLGSPQVSVSVLEALFNASNAPNSSFEVAG 60

Query: 65  IVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQPELCITA 124
           IVTQPPSRRDRG+K++PSPVAQYALDKG  SDLI +PEKAG++ FLS L+ LQPELCITA
Sbjct: 61  IVTQPPSRRDRGKKVLPSPVAQYALDKGLPSDLIFSPEKAGDEAFLSALRELQPELCITA 120

Query: 125 AYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRALDAG 184
           AYGNILPTKFL IP  GTVNIHPSLLPLYRGAAPVQRALQDGV ETGVSLAFTVR LDAG
Sbjct: 121 AYGNILPTKFLKIPVHGTVNIHPSLLPLYRGAAPVQRALQDGVPETGVSLAFTVRKLDAG 180

Query: 185 PVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESKATKAPK 244
           PVIA ++F+VD+ IK   L S   S GS LLIRELPSI DGSA+ KA PQD+SKAT APK
Sbjct: 181 PVIASKRFQVDDLIKAPELLSFLFSEGSNLLIRELPSIFDGSAKSKAAPQDDSKATLAPK 240

Query: 245 IQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSGCHNILE 304
                       IAPDEAWLSFDQEA+VLHNKVRAFAGWPGTRAKVVV DEKSG  N+LE
Sbjct: 241 ------------IAPDEAWLSFDQEAFVLHNKVRAFAGWPGTRAKVVVLDEKSGQQNVLE 300

Query: 305 FKIITTRV----GIQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSAGAFWNG 363
            KI++TRV     IQ+++ D + F K +L+FPC G TALEVLEVQLPGKK ++A AFWNG
Sbjct: 301 LKIMSTRVCKDLEIQDSEQDYVTFKKGSLIFPCRGGTALEVLEVQLPGKKAINAAAFWNG 348

[Close]

BLAST of CmaCh01G003480 vs. TAIR10
Match: AT5G17450.1 (AT5G17450.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.7e-34
Identity = 68/98 (69.39%), Postives = 84/98 (85.71%), Query Frame = 1


Query: 360 GVKTVEMMRKQHRVRVSGYVDAQKVLKRVKSTGKRAEFWPYIPQHLVHYPYALGAYDKKA 419
           GVK+VE+ RKQ R+ V+G+VD  KVLKRVKSTGK+AEFWPYIPQH+V+YP+A G YDK+A
Sbjct: 52  GVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRA 111

Query: 420 PAGFVRNVVQAFPSAH--EQNYASIFSDDNVH-ACSIM 455
           PAG +RN  Q+FP+A+  E+NY S+FSDDNVH ACSIM
Sbjct: 112 PAGHIRNPTQSFPTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of CmaCh01G003480 vs. TAIR10
Match: AT1G71050.1 (AT1G71050.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-29
Identity = 59/110 (53.64%), Postives = 84/110 (76.36%), Query Frame = 1


Query: 349 KKVVSAGAFWNGVKTVEMMRKQHRVRVSGYVDAQKVLKRVKSTGKRAEFWPYIPQHLVHY 408
           ++V +A +   GVK+VE+ RK H+V VSGYV+ +KVLKR++ TGK+AE WPY+P ++V Y
Sbjct: 43  RRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAY 102

Query: 409 PYALGAYDKKAPAGFVR----NVVQAFPSAHEQNYASIFSDDNVHACSIM 455
           PYA+G YDKKAPAG+VR    + +Q  P A E +Y S+FSD+N +AC++M
Sbjct: 103 PYAVGTYDKKAPAGYVRKSEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

[Close]

BLAST of CmaCh01G003480 vs. TAIR10
Match: AT1G22990.1 (AT1G22990.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-26
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 1


Query: 349 KKVVSAGAFWNGVKTVEMMRKQHRVRVSGYVDAQKVLKRVKSTG-KRAEFWPYIPQHLVH 408
           +K+ +A +   G K+VE+ RK H+V VSGYVD +KVLK V+STG K+AE WPY+P  +V 
Sbjct: 44  RKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVA 103

Query: 409 YPYALGAYDKKAPAGFVR--NVVQAFPSAHEQNYASIFSDDNVHACSIM 455
           YPYA GAYDK+AP GFVR     QA P + +    S+FSD+N +AC++M
Sbjct: 104 YPYAAGAYDKRAPPGFVRKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of CmaCh01G003480 vs. TAIR10
Match: AT4G39700.1 (AT4G39700.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-25
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 350 KVVSAGAFWNGVKTVEMMRKQHRVRVSGYVDAQKVLKRVKSTGKRAEFWPYIPQHLVHYP 409
           K+ ++ +   GVKTVE+ +KQ +V VSGY DA KVLK+ K+TGK+AE WPY+P +LV  P
Sbjct: 48  KIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGKKAEIWPYVPYNLVAQP 107

Query: 410 YALGAYDKKAPAGFVR----NVVQAFPSAH--EQNYASIFSDDNVHACSIM 455
           Y   AYDKKAP G+VR    NV     + +  + +Y S+FSDDN +ACSIM
Sbjct: 108 YIAQAYDKKAPPGYVRKVDPNVTTGTMAVYYDDPSYTSLFSDDNPNACSIM 158

[Close]

BLAST of CmaCh01G003480 vs. NCBI nr
Match: gi|659114520|ref|XP_008457092.1| (PREDICTED: cytosolic 10-formyltetrahydrofolate dehydrogenase isoform X2 [Cucumis melo])

HSP 1 Score: 569.3 bits (1466), Expect = 6.0e-159
Identity = 303/366 (82.79%), Postives = 318/366 (86.89%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATSPSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFAADAAF 60
           M SSL FRRF C HS +SPSS    +FSKKKPLVFLGSPQVST VLDAL NAS +ADAAF
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSS----LFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAF 60

Query: 61  EVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQPEL 120
           EVAAIVTQPPSRRDRGRK+MPSPVAQYALDKGFSSDLILTPE+AGED FLSTLKALQPEL
Sbjct: 61  EVAAIVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGEDTFLSTLKALQPEL 120

Query: 121 CITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRA 180
           CITAAYGNILPT+FLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRA
Sbjct: 121 CITAAYGNILPTEFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRA 180

Query: 181 LDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESKAT 240
           LDAGPVIA EKFEVDE IK   L +     GSKLLIRELPSILDGSAEKKAQPQDESKAT
Sbjct: 181 LDAGPVIASEKFEVDEHIKAPDLLALLFLEGSKLLIRELPSILDGSAEKKAQPQDESKAT 240

Query: 241 KAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSGCH 300
           KAPKI            APDEAWLSFDQEAYVLHNKVRAFAGWPGTRAK+V+ DEKSG  
Sbjct: 241 KAPKI------------APDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKIVIVDEKSGRD 300

Query: 301 NILEFKIITTRVGI----QETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSAGA 360
           +ILEFKIITTR+ I    QETQADEI FVKDAL+FPCGG T LEVLEVQLPGKKVV+A A
Sbjct: 301 DILEFKIITTRLNINCSSQETQADEIRFVKDALVFPCGGTTPLEVLEVQLPGKKVVNASA 350

Query: 361 FWNGVK 363
           FWNG++
Sbjct: 361 FWNGMQ 350

[Close]

BLAST of CmaCh01G003480 vs. NCBI nr
Match: gi|449445959|ref|XP_004140739.1| (PREDICTED: mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X1 [Cucumis sativus])

HSP 1 Score: 568.9 bits (1465), Expect = 7.8e-159
Identity = 304/382 (79.58%), Postives = 325/382 (85.08%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATSPSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFAADAAF 60
           M SSL FRRF C HS +SPSS    VFSKKKPLVFLGSPQVST VLDAL NAS  ADAAF
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSS----VFSKKKPLVFLGSPQVSTVVLDALLNASSLADAAF 60

Query: 61  EVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQPEL 120
           E+AAIVTQPPSRRDRGRK+MPSPVAQYALDKGFSSDLILTPEKAGED FLSTLK L+PEL
Sbjct: 61  EIAAIVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGEDMFLSTLKVLEPEL 120

Query: 121 CITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRA 180
           CITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRA
Sbjct: 121 CITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRA 180

Query: 181 LDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESKAT 240
           LDAGP+IA EKFEV+E IK   L +     GSKLLIRELPSILDGSAEKKAQPQDESKAT
Sbjct: 181 LDAGPIIASEKFEVNEHIKAPDLLALLFLEGSKLLIRELPSILDGSAEKKAQPQDESKAT 240

Query: 241 KAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSGCH 300
           KAPK            IAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAK+VV DEKSG  
Sbjct: 241 KAPK------------IAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKIVVVDEKSGHD 300

Query: 301 NILEFKIITTRVGI----QETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSAGA 360
           +ILEFKIITTR+ +    QETQADEI FVKDAL+FPCGG T+LEVLEVQLPGKKV+SA A
Sbjct: 301 DILEFKIITTRLNVNCSSQETQADEIRFVKDALVFPCGGHTSLEVLEVQLPGKKVISASA 360

Query: 361 FWNGVKTVEMMR---KQHRVRV 376
           FWNG++  ++ +    +H +RV
Sbjct: 361 FWNGMQGKKLKKFDASKHFLRV 366

[Close]

BLAST of CmaCh01G003480 vs. NCBI nr
Match: gi|659114518|ref|XP_008457091.1| (PREDICTED: cytosolic 10-formyltetrahydrofolate dehydrogenase isoform X1 [Cucumis melo])

HSP 1 Score: 553.9 bits (1426), Expect = 2.6e-154
Identity = 303/395 (76.71%), Postives = 318/395 (80.51%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATSPSSSSSSVFSKKKPLVFLGSPQVSTTVLDALFNASFAADAAF 60
           M SSL FRRF C HS +SPSS    +FSKKKPLVFLGSPQVST VLDAL NAS +ADAAF
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSS----LFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAF 60

Query: 61  EVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGE-------------- 120
           EVAAIVTQPPSRRDRGRK+MPSPVAQYALDKGFSSDLILTPE+AGE              
Sbjct: 61  EVAAIVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGEHAVRVYEEYFYNVG 120

Query: 121 ---------------DKFLSTLKALQPELCITAAYGNILPTKFLNIPALGTVNIHPSLLP 180
                          D FLSTLKALQPELCITAAYGNILPT+FLNIPALGTVNIHPSLLP
Sbjct: 121 HQVYFFHRRTLYLYFDTFLSTLKALQPELCITAAYGNILPTEFLNIPALGTVNIHPSLLP 180

Query: 181 LYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAFEKFEVDEQIKHKWLKSENPSHG 240
           LYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIA EKFEVDE IK   L +     G
Sbjct: 181 LYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIASEKFEVDEHIKAPDLLALLFLEG 240

Query: 241 SKLLIRELPSILDGSAEKKAQPQDESKATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAY 300
           SKLLIRELPSILDGSAEKKAQPQDESKATKAPKI            APDEAWLSFDQEAY
Sbjct: 241 SKLLIRELPSILDGSAEKKAQPQDESKATKAPKI------------APDEAWLSFDQEAY 300

Query: 301 VLHNKVRAFAGWPGTRAKVVVADEKSGCHNILEFKIITTRVGI----QETQADEICFVKD 360
           VLHNKVRAFAGWPGTRAK+V+ DEKSG  +ILEFKIITTR+ I    QETQADEI FVKD
Sbjct: 301 VLHNKVRAFAGWPGTRAKIVIVDEKSGRDDILEFKIITTRLNINCSSQETQADEIRFVKD 360

Query: 361 ALLFPCGGRTALEVLEVQLPGKKVVSAGAFWNGVK 363
           AL+FPCGG T LEVLEVQLPGKKVV+A AFWNG++
Sbjct: 361 ALVFPCGGTTPLEVLEVQLPGKKVVNASAFWNGMQ 379

[Close]

BLAST of CmaCh01G003480 vs. NCBI nr
Match: gi|694392680|ref|XP_009371809.1| (PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 506.9 bits (1304), Expect = 3.6e-140
Identity = 270/383 (70.50%), Postives = 310/383 (80.94%), Query Frame = 1


Query: 1   MASSLFFRRFCCLHSATSPSSSSSSVF--SKKKPLVFLGSPQVSTTVLDALFNASFAADA 60
           M SSL FRRF C  +ATS SSSSS++   S KKPLVFLGSPQVS TVLDAL NAS AAD+
Sbjct: 1   MNSSLVFRRFWCFSAATSSSSSSSTLCFASNKKPLVFLGSPQVSATVLDALLNASTAADS 60

Query: 61  AFEVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQP 120
            FEVAAIVTQPPSR+ RG+K+MPSP+AQ+ALD+GF S+LI TPE+AGED FLS L+ALQP
Sbjct: 61  LFEVAAIVTQPPSRKSRGKKLMPSPLAQHALDRGFPSNLIFTPERAGEDVFLSNLRALQP 120

Query: 121 ELCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTV 180
           +LCITAAYGNILPTKFLNIP LGTVNIHPSLLPLYRGAAPVQRALQDGV ETGVSLAFTV
Sbjct: 121 QLCITAAYGNILPTKFLNIPTLGTVNIHPSLLPLYRGAAPVQRALQDGVNETGVSLAFTV 180

Query: 181 RALDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESK 240
           RALDAGPVIA E+ E+D+QIK   L +   + GSKLLI ELPSI DGSA+ KA+PQD+SK
Sbjct: 181 RALDAGPVIACERMEIDDQIKALDLLALLFNEGSKLLINELPSIFDGSAKVKARPQDDSK 240

Query: 241 ATKAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSG 300
           AT APK            IAP+E+WLSFDQEA VLHNKVRAFAGWPGTRAKVV+ D K+G
Sbjct: 241 ATLAPK------------IAPEESWLSFDQEASVLHNKVRAFAGWPGTRAKVVIIDNKTG 300

Query: 301 CHNILEFKIITTRV----GIQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSA 360
             NI+EFKI+TT+V     +Q  QADEI F+K AL+FPCG  TALEVLEVQ+PGKK +SA
Sbjct: 301 QENIMEFKIMTTKVCSQRNVQVNQADEITFIKPALVFPCGRGTALEVLEVQIPGKKAISA 360

Query: 361 GAFWNGVKTVEMMRKQHRVRVSG 378
            AFWNG++  + ++  H   V+G
Sbjct: 361 AAFWNGLRG-QKLKIYHASNVNG 370

[Close]

BLAST of CmaCh01G003480 vs. NCBI nr
Match: gi|694392677|ref|XP_009371808.1| (PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 503.4 bits (1295), Expect = 4.0e-139
Identity = 268/381 (70.34%), Postives = 306/381 (80.31%), Query Frame = 1


Query: 4   SLFFRRFCCLHSATSPSSSSSSVF---SKKKPLVFLGSPQVSTTVLDALFNASFAADAAF 63
           SL FRRF C  +ATS SSS SS     S KKPLVFLGSPQVS TVLDAL NAS AAD+ F
Sbjct: 4   SLVFRRFWCFGAATSSSSSCSSTLCFASNKKPLVFLGSPQVSATVLDALLNASTAADSLF 63

Query: 64  EVAAIVTQPPSRRDRGRKMMPSPVAQYALDKGFSSDLILTPEKAGEDKFLSTLKALQPEL 123
           EVAAIVTQPPSR+ RG+K+MPSP+AQ+ALD+GF S+LI TPE+AGED FLS L+ALQP+L
Sbjct: 64  EVAAIVTQPPSRKSRGKKLMPSPLAQHALDRGFPSNLIFTPERAGEDVFLSNLRALQPQL 123

Query: 124 CITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDGVKETGVSLAFTVRA 183
           CITAAYGNILPTKFLNIP LGTVNIHPSLLPLYRGAAPVQRALQDGV ETGVSLAFTVRA
Sbjct: 124 CITAAYGNILPTKFLNIPTLGTVNIHPSLLPLYRGAAPVQRALQDGVNETGVSLAFTVRA 183

Query: 184 LDAGPVIAFEKFEVDEQIKHKWLKSENPSHGSKLLIRELPSILDGSAEKKAQPQDESKAT 243
           LDAGPVIA E+ E+D+QIK   L +   + GSKLLI ELPSI DGSA+ KA+PQD+SKAT
Sbjct: 184 LDAGPVIACERMEIDDQIKALDLLALLFNEGSKLLINELPSIFDGSAKVKARPQDDSKAT 243

Query: 244 KAPKIQVLWNLTLVMQIAPDEAWLSFDQEAYVLHNKVRAFAGWPGTRAKVVVADEKSGCH 303
            APK            IAP+E+WLSFDQEA VLHNKVRAFAGWPGTRAKVV+ D K+G  
Sbjct: 244 LAPK------------IAPEESWLSFDQEASVLHNKVRAFAGWPGTRAKVVIIDNKTGQE 303

Query: 304 NILEFKIITTRV----GIQETQADEICFVKDALLFPCGGRTALEVLEVQLPGKKVVSAGA 363
           NI+EFKI+TT+V     +Q  QADEI F+K AL+FPCG  TALEVLEVQ+PGKK +SA A
Sbjct: 304 NIMEFKIMTTKVCSQRNVQVNQADEITFIKPALVFPCGRGTALEVLEVQIPGKKAISAAA 363

Query: 364 FWNGVKTVEMMRKQHRVRVSG 378
           FWNG++  + ++  H   V+G
Sbjct: 364 FWNGLRG-QKLKIYHASNVNG 371

The following BLAST results are available for this feature:

BLAST of CmaCh01G003480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FMT_BACLD	4.3e-40	33.14	Methionyl-tRNA formyltransferase OS=Bacillus licheniformis (strain ATCC 14580 / ...	[more]
FMT_STACT	1.2e-39	31.40	Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain TM300) GN=fm...	[more]
FMT_MOOTA	6.8e-38	33.83	Methionyl-tRNA formyltransferase OS=Moorella thermoacetica (strain ATCC 39073) G...	[more]
FMT_KOSOT	2.6e-37	32.40	Methionyl-tRNA formyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=fmt...	[more]
FMT_STAEQ	2.6e-37	30.91	Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis (strain ATCC 3598...	[more]

BLAST of CmaCh01G003480 vs. TrEMBL


Match Name	E-value	Identity	Description
D7TSU1_VITVI	1.2e-137	72.36	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01830 PE=3 SV=...	[more]
A0A0B0N7U7_GOSAR	1.5e-137	71.51	Methionyl-tRNA formyltransferase OS=Gossypium arboreum GN=F383_13374 PE=3 SV=1	[more]
A0A0D2N7B6_GOSRA	5.8e-137	71.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G085900 PE=3 SV=1	[more]
A0A061EG82_THECC	7.6e-137	71.93	Formyltransferase, putative isoform 1 OS=Theobroma cacao GN=TCM_019284 PE=3 SV=1	[more]
A0A067F728_CITSI	1.2e-134	71.78	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048078mg PE=3 S...	[more]

BLAST of CmaCh01G003480 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66520.1	1.7e-135	69.61	formyltransferase, putative	[more]
AT5G17450.1	3.7e-34	69.39	Heavy metal transport/detoxification superfamily protein	[more]
AT1G71050.1	2.8e-29	53.64	Heavy metal transport/detoxification superfamily protein	[more]
AT1G22990.1	4.9e-26	53.21	Heavy metal transport/detoxification superfamily protein	[more]
AT4G39700.1	3.2e-25	52.25	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of CmaCh01G003480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114520\|ref\|XP_008457092.1\|	6.0e-159	82.79	PREDICTED: cytosolic 10-formyltetrahydrofolate dehydrogenase isoform X2 [Cucumis...	[more]
gi\|449445959\|ref\|XP_004140739.1\|	7.8e-159	79.58	PREDICTED: mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X1 [Cuc...	[more]
gi\|659114518\|ref\|XP_008457091.1\|	2.6e-154	76.71	PREDICTED: cytosolic 10-formyltetrahydrofolate dehydrogenase isoform X1 [Cucumis...	[more]
gi\|694392680\|ref\|XP_009371809.1\|	3.6e-140	70.50	PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform X3 [Pyrus x b...	[more]
gi\|694392677\|ref\|XP_009371808.1\|	4.0e-139	70.34	PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform X2 [Pyrus x b...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002376	Formyl_transf_N
IPR005793	Formyl_trans_C
IPR005794	Fmt
IPR011034	Formyl_transferase-like_C_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0016742	hydroxymethyl-, formyl- and related transferase activity
GO:0004479	methionyl-tRNA formyltransferase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0071951	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071951	conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
biological_process	GO:0006555	methionine metabolic process
biological_process	GO:0046653	tetrahydrofolate metabolic process
biological_process	GO:0006413	translational initiation
biological_process	GO:0030001	metal ion transport
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0055073	cadmium ion homeostasis
biological_process	GO:0071585	detoxification of cadmium ion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004479	methionyl-tRNA formyltransferase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016742	hydroxymethyl-, formyl- and related transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003480.1	CmaCh01G003480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002376	Formyl transferase, N-terminal	GENE3D	G3DSA:3.40.50.170		coord: 33..245 score: 5.6
IPR002376	Formyl transferase, N-terminal	PFAM	PF00551	Formyl_trans_N	coord: 44..215 score: 9.0
IPR002376	Formyl transferase, N-terminal	unknown	SSF53328	Formyltransferase	coord: 32..244 score: 1.83
IPR005793	Formyl transferase, C-terminal	GENE3D	G3DSA:3.10.25.10		coord: 260..361 score: 1.4
IPR005793	Formyl transferase, C-terminal	PFAM	PF02911	Formyl_trans_C	coord: 256..361 score: 9.9
IPR005794	Methionyl-tRNA formyltransferase	HAMAP	MF_00182	Formyl_trans	coord: 31..364 score: 25
IPR011034	Formyl transferase, C-terminal-like	unknown	SSF50486	FMT C-terminal domain-like	coord: 258..364 score: 2.35
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 362..399 score: 4.
None	No IPR available	PANTHER	PTHR11138	METHIONYL-TRNA FORMYLTRANSFERASE	coord: 16..368 score: 2.6E
None	No IPR available	PANTHER	PTHR11138:SF3	TRANSFERASE, PUTATIVE-RELATED	coord: 16..368 score: 2.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G003480	Cucsa.108360	Cucumber (Gy14) v1	cgycmaB0250
CmaCh01G003480	Cla013159	Watermelon (97103) v1	cmawmB434
CmaCh01G003480	Csa3G185150	Cucumber (Chinese Long) v2	cmacuB458
CmaCh01G003480	MELO3C020307	Melon (DHL92) v3.5.1	cmameB431
CmaCh01G003480	ClCG05G010820	Watermelon (Charleston Gray)	cmawcgB407
CmaCh01G003480	CSPI03G17510	Wild cucumber (PI 183967)	cmacpiB461
CmaCh01G003480	CmoCh01G003660	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G003480	CmoCh14G008730	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G003480	Lsi05G002900	Bottle gourd (USVL1VR-Ls)	cmalsiB440
CmaCh01G003480	Cp4.1LG02g16740	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G003480	Cp4.1LG03g05710	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G003480	MELO3C020307.2	Melon (DHL92) v3.6.1	cmamedB496
CmaCh01G003480	CsaV3_3G017680	Cucumber (Chinese Long) v3	cmacucB0550
CmaCh01G003480	Cla97C05G093130	Watermelon (97103) v2	cmawmbB473
CmaCh01G003480	Bhi01G001335	Wax gourd	cmawgoB0559
CmaCh01G003480	CsGy3G017540	Cucumber (Gy14) v2	cgybcmaB371
CmaCh01G003480	Carg07438	Silver-seed gourd	carcmaB1059
CmaCh01G003480	Carg24232	Silver-seed gourd	carcmaB0241

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G003480	CmaCh14G008590	Cucurbita maxima (Rimu)	cmacmaB255

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G003480	Cucumber (Gy14) v2	cgybcmaB368
CmaCh01G003480	Cucumber (Chinese Long) v3	cmacucB0547
CmaCh01G003480	Cucumber (Gy14) v1	cgycmaB0551