Carg24232 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24232
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heavy metal-associated isoprenylated plant protein
Location	Cucurbita_argyrosperma_scaffold_191 : 110192 .. 111052 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCTCTTGATTACCTTTCCAACTTTTGCACTGTCTCATCAACTACAACAAGAAGCAAACACAAGCCTATGCAGGTACACCAACAATTTGTTCACAATTTTCCCATGTTTTACGTCTTTTGAATTCACGTTACGTGTTTTTCTTAGACCGTCGAGATTAAAGTGAAGATGGATTGTGATGGATGTGAAAGAAGAGTTAGAAACGCCGTCACTTCCATGAAAGGTTAGTTCATTTTGTCTCCCTCTCGTTAACTGATCAAGTTCTTACAACGTGATGTTGTCTCGATTCTTAAAAGGGTACCTTTCTCTGAGATCCCACATCTAAGAAACGAGTGTCAGCGAGGACGCTAGACCTCAAAGCGGGTGGATTGTGAAATCCCATATTGGTTGGGGTAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGAAAACACGTTTTAAACTCCAAACAGTTAGAATAGCTAACCGAGTATAGCTTAATAAGTTTCGATATTTGTTCTCTGTTTGCAACCATTTAAGATATGGAGTTGAAAAATGACCCGAACATCGATCGATGTAGGAGTGAAGACGGTGGAAGTGATGAGGAAGCAACATAGGGTGAGGGTTAGTGGGTATGTTGATGCAAAAAAAGTGCTTAAGAGAGTAAAAAGCACAGGAAAAAGAGCTGAATTTTGGCCTTACATTCCACAGCATCTTGTCCATTACCCTTATGCCTCAGGAGCTTATGACAAGAAGGCTCCGGCTGGGTTTGTTAGGAATGTTGTGCAAGCTTTTCCGACAGCACATGAAGACAACTATGTCTCTGTTTTTAGTGATGACAATGTCAATGCTTGTTCCATCATGTAG

mRNA sequence

ATGGGAGCTCTTGATTACCTTTCCAACTTTTGCACTGTCTCATCAACTACAACAAGAAGCAAACACAAGCCTATGCAGACCGTCGAGATTAAAGTGAAGATGGATTGTGATGGATGTGAAAGAAGAGTTAGAAACGCCGTCACTTCCATGAAAGGAGTGAAGACGGTGGAAGTGATGAGGAAGCAACATAGGGTGAGGGTTAGTGGGTATGTTGATGCAAAAAAAGTGCTTAAGAGAGTAAAAAGCACAGGAAAAAGAGCTGAATTTTGGCCTTACATTCCACAGCATCTTGTCCATTACCCTTATGCCTCAGGAGCTTATGACAAGAAGGCTCCGGCTGGGTTTGTTAGGAATGTTGTGCAAGCTTTTCCGACAGCACATGAAGACAACTATGTCTCTGTTTTTAGTGATGACAATGTCAATGCTTGTTCCATCATGTAG

Coding sequence (CDS)

ATGGGAGCTCTTGATTACCTTTCCAACTTTTGCACTGTCTCATCAACTACAACAAGAAGCAAACACAAGCCTATGCAGACCGTCGAGATTAAAGTGAAGATGGATTGTGATGGATGTGAAAGAAGAGTTAGAAACGCCGTCACTTCCATGAAAGGAGTGAAGACGGTGGAAGTGATGAGGAAGCAACATAGGGTGAGGGTTAGTGGGTATGTTGATGCAAAAAAAGTGCTTAAGAGAGTAAAAAGCACAGGAAAAAGAGCTGAATTTTGGCCTTACATTCCACAGCATCTTGTCCATTACCCTTATGCCTCAGGAGCTTATGACAAGAAGGCTCCGGCTGGGTTTGTTAGGAATGTTGTGCAAGCTTTTCCGACAGCACATGAAGACAACTATGTCTCTGTTTTTAGTGATGACAATGTCAATGCTTGTTCCATCATGTAG

Protein sequence

MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMRKQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVVQAFPTAHEDNYVSVFSDDNVNACSIM

Homology

[Close]

BLAST of Carg24232 vs. NCBI nr
Match: XP_023528263.1 (heavy metal-associated isoprenylated plant protein 21 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 4.7e-77
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDYLSNFC VSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR
Sbjct: 1   MGALDYLSNFCIVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV
Sbjct: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120

Query: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 147
           QAFPTAHEDNYVSVFSDDNVNACSIM
Sbjct: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 146

[Close]

BLAST of Carg24232 vs. NCBI nr
Match: XP_022935140.1 (heavy metal-associated isoprenylated plant protein 21-like [Cucurbita moschata])

HSP 1 Score: 296.2 bits (757), Expect = 6.1e-77
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDYLSNFCTVSSTTT SKHKPMQT+EIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR
Sbjct: 1   MGALDYLSNFCTVSSTTTTSKHKPMQTIEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV
Sbjct: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120

Query: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 147
           QAFPTAHEDNYVSVFSDDNVNACSIM
Sbjct: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 146

[Close]

BLAST of Carg24232 vs. NCBI nr
Match: XP_022983265.1 (heavy metal-associated isoprenylated plant protein 21-like [Cucurbita maxima])

HSP 1 Score: 293.5 bits (750), Expect = 4.0e-76
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGAL YLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGV TVEVMR
Sbjct: 1   MGALHYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVTTVEVMR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV
Sbjct: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120

Query: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 147
           QAFPTAHEDNYVSVFSDDNVNACS+M
Sbjct: 121 QAFPTAHEDNYVSVFSDDNVNACSVM 146

[Close]

BLAST of Carg24232 vs. NCBI nr
Match: XP_022998166.1 (heavy metal-associated isoprenylated plant protein 21-like [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 1.4e-68
Identity = 130/146 (89.04%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDYLSNFC +  T TR+KHKPMQTVEIKVK+DCDGCERRVRNAV+SMKGVKTVE+MR
Sbjct: 1   MGALDYLSNFCIL--TPTRTKHKPMQTVEIKVKLDCDGCERRVRNAVSSMKGVKTVEMMR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQHRVRVSGYVDA+KVLKRVKSTGKRAEFWPYIPQHLVHYPYA GAYDKKAPAGFVRNVV
Sbjct: 61  KQHRVRVSGYVDAQKVLKRVKSTGKRAEFWPYIPQHLVHYPYALGAYDKKAPAGFVRNVV 120

Query: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 147
           QAFP+AHE NY S+FSDDNV+ACSIM
Sbjct: 121 QAFPSAHEQNYASIFSDDNVHACSIM 144

[Close]

BLAST of Carg24232 vs. NCBI nr
Match: XP_023522622.1 (heavy metal-associated isoprenylated plant protein 21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 4.0e-68
Identity = 129/146 (88.36%), Postives = 139/146 (95.21%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDYLSNFC +  T TR+KHKPMQTVEIKVK+DCDGCERRVRNAV+SMKGVK+VEVMR
Sbjct: 1   MGALDYLSNFCIL--TPTRTKHKPMQTVEIKVKLDCDGCERRVRNAVSSMKGVKSVEVMR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQHRVRVSGYVDA+KVLKRVKSTGKRAEFWPYIPQHLVHYPYA GAYDKKAP+GFVRNVV
Sbjct: 61  KQHRVRVSGYVDAQKVLKRVKSTGKRAEFWPYIPQHLVHYPYALGAYDKKAPSGFVRNVV 120

Query: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 147
           QAFP+AHE NY S+FSDDNV+ACSIM
Sbjct: 121 QAFPSAHEQNYASIFSDDNVHACSIM 144

[Close]

BLAST of Carg24232 vs. TAIR10
Match: AT5G17450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 215.3 bits (547), Expect = 2.5e-56
Identity = 103/149 (69.13%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGA DY+S+FC+ +    ++K KP+QTV+IKVKMDCDGCERRVRN V  MKGVK+VEV R
Sbjct: 1   MGAFDYISSFCSYTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQ R+ V+G+VD  KVLKRVKSTGK+AEFWPYIPQH+V+YP+A G YDK+APAG +RN  
Sbjct: 61  KQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPT 120

Query: 121 QAFPTAH--EDNYVSVFSDDNVN-ACSIM 147
           Q+FPTA+  E+NYVS+FSDDNV+ ACSIM
Sbjct: 121 QSFPTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of Carg24232 vs. TAIR10
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-48
Identity = 95/152 (62.50%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MGALDYLSNFCT--VSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEV 60
           MGALD LS + +     T  R K K MQTV IKVKMDCDGCERRV+NAV+SMKGVK+VEV
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  MRKQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVR- 120
            RK H+V VSGYV+ KKVLKR++ TGK+AE WPY+P ++V YPYA G YDKKAPAG+VR 
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRK 120

Query: 121 ---NVVQAFPTAHEDNYVSVFSDDNVNACSIM 147
              + +Q  P A E++Y+S+FSD+N NAC++M
Sbjct: 121 SEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

[Close]

BLAST of Carg24232 vs. TAIR10
Match: AT1G22990.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 9.8e-45
Identity = 91/152 (59.87%), Postives = 115/152 (75.66%), Query Frame = 0


Query: 1   MGALDYLSNFCT---VSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVE 60
           MGAL+YLS + +     S   R K K MQTV IKVK+DCDGCER+++NAV+S+KG K+VE
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  VMRKQHRVRVSGYVDAKKVLKRVKSTG-KRAEFWPYIPQHLVHYPYASGAYDKKAPAGFV 120
           V RK H+V VSGYVD KKVLK V+STG K+AE WPY+P  +V YPYA+GAYDK+AP GFV
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 R--NVVQAFPTAHEDNYVSVFSDDNVNACSIM 147
           R     QA P + +D  +S+FSD+N NAC++M
Sbjct: 121 RKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of Carg24232 vs. TAIR10
Match: AT4G39700.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-39
Identity = 80/154 (51.95%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 2   GALDYLSNFCTVSSTTT---RSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEV 61
           G L+Y+S       + +   R K K  QTVE+KV+MDCDGC  +++N+++S+KGVKTVE+
Sbjct: 5   GTLEYISELIGNGGSHSYGKRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEI 64

Query: 62  MRKQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRN 121
            +KQ +V VSGY DA KVLK+ K+TGK+AE WPY+P +LV  PY + AYDKKAP G+VR 
Sbjct: 65  NKKQQKVTVSGYADASKVLKKAKATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYVRK 124

Query: 122 VVQAFPTA------HEDNYVSVFSDDNVNACSIM 147
           V     T        + +Y S+FSDDN NACSIM
Sbjct: 125 VDPNVTTGTMAVYYDDPSYTSLFSDDNPNACSIM 158

[Close]

BLAST of Carg24232 vs. TAIR10
Match: AT4G38580.1 (farnesylated protein 6)

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-34
Identity = 75/153 (49.02%), Postives = 98/153 (64.05%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MG LD++S     S      K K +QTVEIKVKMDC+GCER+VR +V  MKGV +V +  
Sbjct: 1   MGVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEP 60

Query: 61  KQHRVRVSGYVDAKKVLKRVK-STGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNV 120
           K H+V V GYVD  KV+ R+   TGK+ E WPY+P  +V +PYA+G YDKKAP+G+VR V
Sbjct: 61  KAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRV 120

Query: 121 VQ------AFPTAHEDNYVSVFSDDNVNACSIM 147
                   A  ++ E  Y + FSD+N  AC +M
Sbjct: 121 DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of Carg24232 vs. Swiss-Prot
Match: sp|Q9LF57|HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX=3702 GN=HIPP21 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.5e-55
Identity = 103/149 (69.13%), Postives = 126/149 (84.56%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGA DY+S+FC+ +    ++K KP+QTV+IKVKMDCDGCERRVRN V  MKGVK+VEV R
Sbjct: 1   MGAFDYISSFCSYTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQ R+ V+G+VD  KVLKRVKSTGK+AEFWPYIPQH+V+YP+A G YDK+APAG +RN  
Sbjct: 61  KQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPT 120

Query: 121 QAFPTAH--EDNYVSVFSDDNVN-ACSIM 147
           Q+FPTA+  E+NYVS+FSDDNV+ ACSIM
Sbjct: 121 QSFPTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of Carg24232 vs. Swiss-Prot
Match: sp|Q9C9A3|HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.9e-47
Identity = 95/152 (62.50%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MGALDYLSNFCT--VSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEV 60
           MGALD LS + +     T  R K K MQTV IKVKMDCDGCERRV+NAV+SMKGVK+VEV
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  MRKQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVR- 120
            RK H+V VSGYV+ KKVLKR++ TGK+AE WPY+P ++V YPYA G YDKKAPAG+VR 
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRK 120

Query: 121 ---NVVQAFPTAHEDNYVSVFSDDNVNACSIM 147
              + +Q  P A E++Y+S+FSD+N NAC++M
Sbjct: 121 SEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

[Close]

BLAST of Carg24232 vs. Swiss-Prot
Match: sp|Q93VP2|HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX=3702 GN=HIPP22 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-43
Identity = 91/152 (59.87%), Postives = 115/152 (75.66%), Query Frame = 0


Query: 1   MGALDYLSNFCT---VSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVE 60
           MGAL+YLS + +     S   R K K MQTV IKVK+DCDGCER+++NAV+S+KG K+VE
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  VMRKQHRVRVSGYVDAKKVLKRVKSTG-KRAEFWPYIPQHLVHYPYASGAYDKKAPAGFV 120
           V RK H+V VSGYVD KKVLK V+STG K+AE WPY+P  +V YPYA+GAYDK+AP GFV
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 R--NVVQAFPTAHEDNYVSVFSDDNVNACSIM 147
           R     QA P + +D  +S+FSD+N NAC++M
Sbjct: 121 RKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of Carg24232 vs. Swiss-Prot
Match: sp|O65657|HIP23_ARATH (Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX=3702 GN=HIPP23 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.8e-38
Identity = 80/154 (51.95%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 2   GALDYLSNFCTVSSTTT---RSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEV 61
           G L+Y+S       + +   R K K  QTVE+KV+MDCDGC  +++N+++S+KGVKTVE+
Sbjct: 5   GTLEYISELIGNGGSHSYGKRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEI 64

Query: 62  MRKQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRN 121
            +KQ +V VSGY DA KVLK+ K+TGK+AE WPY+P +LV  PY + AYDKKAP G+VR 
Sbjct: 65  NKKQQKVTVSGYADASKVLKKAKATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYVRK 124

Query: 122 VVQAFPTA------HEDNYVSVFSDDNVNACSIM 147
           V     T        + +Y S+FSDDN NACSIM
Sbjct: 125 VDPNVTTGTMAVYYDDPSYTSLFSDDNPNACSIM 158

[Close]

BLAST of Carg24232 vs. Swiss-Prot
Match: sp|Q9SZN7|HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX=3702 GN=HIPP26 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-33
Identity = 75/153 (49.02%), Postives = 98/153 (64.05%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MG LD++S     S      K K +QTVEIKVKMDC+GCER+VR +V  MKGV +V +  
Sbjct: 1   MGVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEP 60

Query: 61  KQHRVRVSGYVDAKKVLKRVK-STGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNV 120
           K H+V V GYVD  KV+ R+   TGK+ E WPY+P  +V +PYA+G YDKKAP+G+VR V
Sbjct: 61  KAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRV 120

Query: 121 VQ------AFPTAHEDNYVSVFSDDNVNACSIM 147
                   A  ++ E  Y + FSD+N  AC +M
Sbjct: 121 DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of Carg24232 vs. TrEMBL
Match: tr|A0A1S3C4A8|A0A1S3C4A8_CUCME (heavy metal-associated isoprenylated plant protein 21 OS=Cucumis melo OX=3656 GN=LOC103496853 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 130/146 (89.04%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDYLSNFC V  T TR+KHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGV++VEVMR
Sbjct: 1   MGALDYLSNFCIV--TPTRTKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVQSVEVMR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQHRVRV GYVDA KVLKRVKSTGKRAEFWPYIPQHLVH+PYA GAYDKKAP+GFVRNVV
Sbjct: 61  KQHRVRVIGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYAFGAYDKKAPSGFVRNVV 120

Query: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 147
           QAFPT HE+NYVS FSDDNV+ACSIM
Sbjct: 121 QAFPTPHEENYVSFFSDDNVHACSIM 144

[Close]

BLAST of Carg24232 vs. TrEMBL
Match: tr|A0A0A0L636|A0A0A0L636_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185150 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66
Identity = 129/146 (88.36%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDY SNFC V  T TR+KHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVK+VEVMR
Sbjct: 1   MGALDYFSNFCIV--TPTRTKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQHRVRV G VDA KVLKRVKSTGKRAEFWPYIPQHLVH+PYA GAYDKKAP+GFVRNVV
Sbjct: 61  KQHRVRVIGNVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYAFGAYDKKAPSGFVRNVV 120

Query: 121 QAFPTAHEDNYVSVFSDDNVNACSIM 147
           QAFPT HE+NYVS FSDDNV+ACSIM
Sbjct: 121 QAFPTPHEENYVSFFSDDNVHACSIM 144

[Close]

BLAST of Carg24232 vs. TrEMBL
Match: tr|A0A2C9WBT7|A0A2C9WBT7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G074200 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63
Identity = 127/148 (85.81%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDYLSNFCTV  TTTRSK KPMQTVEIKVKMDCDGCERRV+NAV++MKGVKTVEV R
Sbjct: 1   MGALDYLSNFCTV--TTTRSKRKPMQTVEIKVKMDCDGCERRVKNAVSTMKGVKTVEVNR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQ RV VSGYVD  KVLKRVKSTGKRAEFWPYIPQHLV+YPYA+GAYDKKAPAG+VRNVV
Sbjct: 61  KQSRVVVSGYVDPNKVLKRVKSTGKRAEFWPYIPQHLVYYPYAAGAYDKKAPAGYVRNVV 120

Query: 121 QAFP--TAHEDNYVSVFSDDNVNACSIM 147
           QAFP   A EDN+VSVFSDDNV+ACS+M
Sbjct: 121 QAFPASNAAEDNFVSVFSDDNVHACSVM 146

[Close]

BLAST of Carg24232 vs. TrEMBL
Match: tr|A0A067JT09|A0A067JT09_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02501 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.5e-63
Identity = 126/148 (85.14%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGA+DYLSNFCTV  T+TRSK KPMQTVEIKVKMDCDGCERRV+NAV+SM+GVKTVEV R
Sbjct: 1   MGAIDYLSNFCTV--TSTRSKRKPMQTVEIKVKMDCDGCERRVKNAVSSMRGVKTVEVNR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQ RV VSGYVD  KVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDK+APAG+VRNVV
Sbjct: 61  KQSRVVVSGYVDPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKRAPAGYVRNVV 120

Query: 121 QAFP--TAHEDNYVSVFSDDNVNACSIM 147
           QAFP  TA EDN  S+FSDDNV+ACSIM
Sbjct: 121 QAFPASTAPEDNIASIFSDDNVHACSIM 146

[Close]

BLAST of Carg24232 vs. TrEMBL
Match: tr|U5GCI5|U5GCI5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G123400v3 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.7e-62
Identity = 125/148 (84.46%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MGALDYLSNFCTVSSTTTRSKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKTVEVMR 60
           MGALDYLSNFCTV  T+TRSK KPMQTVEIKVKMDCDGCERRV+NAVTSMKGVKTVEV+R
Sbjct: 1   MGALDYLSNFCTV--TSTRSKRKPMQTVEIKVKMDCDGCERRVKNAVTSMKGVKTVEVIR 60

Query: 61  KQHRVRVSGYVDAKKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKKAPAGFVRNVV 120
           KQ RV VSGYVD  KVL+RVKSTGK AEFWPYIPQHLV+YPY SGAYDK+APAG+VRNVV
Sbjct: 61  KQSRVVVSGYVDPNKVLRRVKSTGKVAEFWPYIPQHLVYYPYVSGAYDKRAPAGYVRNVV 120

Query: 121 QAFP--TAHEDNYVSVFSDDNVNACSIM 147
           QA+P   A EDN VS+FSDDNVNACSIM
Sbjct: 121 QAYPASNAPEDNIVSLFSDDNVNACSIM 146

The following BLAST results are available for this feature:

BLAST of Carg24232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528263.1	4.7e-77	99.32	heavy metal-associated isoprenylated plant protein 21 [Cucurbita pepo subsp. pep...	[more]
XP_022935140.1	6.1e-77	98.63	heavy metal-associated isoprenylated plant protein 21-like [Cucurbita moschata]	[more]
XP_022983265.1	4.0e-76	97.95	heavy metal-associated isoprenylated plant protein 21-like [Cucurbita maxima]	[more]
XP_022998166.1	1.4e-68	89.04	heavy metal-associated isoprenylated plant protein 21-like [Cucurbita maxima]	[more]
XP_023522622.1	4.0e-68	88.36	heavy metal-associated isoprenylated plant protein 21-like [Cucurbita pepo subsp...	[more]

BLAST of Carg24232 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17450.1	2.5e-56	69.13	Heavy metal transport/detoxification superfamily protein	[more]
AT1G71050.1	3.2e-48	62.50	Heavy metal transport/detoxification superfamily protein	[more]
AT1G22990.1	9.8e-45	59.87	Heavy metal transport/detoxification superfamily protein	[more]
AT4G39700.1	2.1e-39	51.95	Heavy metal transport/detoxification superfamily protein	[more]
AT4G38580.1	1.6e-34	49.02	farnesylated protein 6	[more]

BLAST of Carg24232 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LF57\|HIP21_ARATH	4.5e-55	69.13	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9C9A3\|HIP20_ARATH	5.9e-47	62.50	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX...	[more]
sp\|Q93VP2\|HIP22_ARATH	1.8e-43	59.87	Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX...	[more]
sp\|O65657\|HIP23_ARATH	3.8e-38	51.95	Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SZN7\|HIP26_ARATH	2.8e-33	49.02	Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg24232 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C4A8\|A0A1S3C4A8_CUCME	1.0e-67	89.04	heavy metal-associated isoprenylated plant protein 21 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0L636\|A0A0A0L636_CUCSA	1.1e-66	88.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185150 PE=4 SV=1	[more]
tr\|A0A2C9WBT7\|A0A2C9WBT7_MANES	1.1e-63	85.81	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G074200 PE=4 SV=...	[more]
tr\|A0A067JT09\|A0A067JT09_JATCU	2.5e-63	85.14	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02501 PE=4 SV=1	[more]
tr\|U5GCI5\|U5GCI5_POPTR	3.7e-62	84.46	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G123400v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036163	HMA_dom_sf
IPR006121	HMA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24232-RA	Carg24232-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 12..91 e-value: 7.9E-18 score: 66.3
None	No IPR available	PANTHER	PTHR22814:SF47	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 21	coord: 1..145
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..145
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 31..85 e-value: 5.0E-11 score: 42.8
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 34..89 score: 10.51
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 29..88 e-value: 2.13546E-11 score: 54.9193
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	SSF55008	HMA, heavy metal-associated domain	coord: 24..91

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24232	Cla013160	Watermelon (97103) v1	carwmB0166
Carg24232	Csa3G185150	Cucumber (Chinese Long) v2	carcuB0196
Carg24232	MELO3C020306	Melon (DHL92) v3.5.1	carmeB0181
Carg24232	ClCG05G010830	Watermelon (Charleston Gray)	carwcgB0168
Carg24232	CSPI03G17510	Wild cucumber (PI 183967)	carcpiB0203
Carg24232	Cucsa.108360	Cucumber (Gy14) v1	carcgyB0216
Carg24232	CmaCh01G003480	Cucurbita maxima (Rimu)	carcmaB0241
Carg24232	CmaCh14G008590	Cucurbita maxima (Rimu)	carcmaB0240
Carg24232	CmoCh01G003670	Cucurbita moschata (Rifu)	carcmoB0249
Carg24232	CmoCh14G008730	Cucurbita moschata (Rifu)	carcmoB0248
Carg24232	Lsi05G002910	Bottle gourd (USVL1VR-Ls)	carlsiB158
Carg24232	Cp4.1LG02g16740	Cucurbita pepo (Zucchini)	carcpeB0256
Carg24232	Cp4.1LG03g05710	Cucurbita pepo (Zucchini)	carcpeB0257
Carg24232	CsGy3G017540	Cucumber (Gy14) v2	carcgybB0190
Carg24232	MELO3C020306.2	Melon (DHL92) v3.6.1	carmedB0185
Carg24232	CsaV3_3G017680	Cucumber (Chinese Long) v3	carcucB0203
Carg24232	Cla97C05G093140	Watermelon (97103) v2	carwmbB0181
Carg24232	Bhi01G001336	Wax gourd	carwgoB0227

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24232	Carg07439	Silver-seed gourd	carcarB213

The following block(s) are covering this gene:

None