Lsi05G002910 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002910
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Heavy metal transport/detoxification superfamily protein
Location	chr05 : 3731560 .. 3733380 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAATATTATCTCTTTGGTTTTGGATTGTGGGAATAAGAGAAATGGGAGCTCTTGATTATCTTTCCAATTTTTGCATTATCACACCAACAAGAGGCAAACACAAGCCAATGCAGGTACCAAATATTTTATTTTTTTTATTTTTATTTTTTAAAAATTTCCCCTATTTTAATTTTAATTTTGAGTTGTCTTTGTAATTTAGATTTGGTGTGTTTTTTTAGACAGTGGAGATCAAAGTGAAGATGGATTGTGATGGATGTGAAAGAAGAGTTAGAAATGCTGTCACTTCCATGAAAGGTTACCGTTTCTTTCTCTCCTGTTCGTCGTTTTAATCAAGTTCTTTACGAACATATGATATTGTCTAAAATTTTAGAAGAGTATTTTCTTTAAGAGTTTGTTAGTAAAATAACATTTCGAATGAATTAAGATATTTATGTAATTCTTTGAGAGGTTTTAAGTTTGAAACTTCGTATTATGTATTTGTGATGTTATATTTCTTTTTTAAAAAGAAAATCTTAGGCTCTCTTTGATAGTGAATTTGTTTTAATTTTCTGTTTTTGAAATTTATGTTTGTTTTCTGATTTTTTTATTATGATTTTCAGCTATTTTAAGTACACACTTGAATTTTCCCGGTTAAATTCTTAAAAAAAAAAAAAAATTGAAAATTACACAATTTTTTTTTTCTTTTTAGTTTTCAAGACTTTTAAGAGTAGAAAGTAGATAACAAAACATAGAACCTTAGGATTTGGGACCTTAGTGAGTTCATTTTCGACAACAAGCAAAACATCCTCCTAGAATAAGTACGTTACTATGTGTGCCAAAATACCATAAGAAATGGGTAAGTTTTCAATTTTTATGACATTTATATTATTATTATGCATAATTAGCACAAAATATATATTTGTTTTTGGGTAATGTTTTAAATGGCAAAACTGTTGAAAATATTTACAAATATAGCAAAATATTTACACACTGATAGACAACATTTTGATATATTTGTAAATATTTTGACTCATTTTGCTATATTTGAAAACAAACATTCGTTTTTCGAACGTTATAACTTATATCATCATTTTATCAGTTAACTTTTAGTATATTAACGATAACACTCGCAAACTTTAAAAAATTTTGAGACGAAATTGAAAAATAACCCTAGTTAAATTATTGATGTATGAAATGATGATAAATGGCAGGAGTAAAGTCAGTGGAAGTGATGAGAAAGCAACATAGAGTAAGGGTAAGTGGTTACGTTGATGCAAACAAAGTGCTAAAAAGAGTAAAAAGCACTGGAAAAAGAGCTGAATTTTGGCCTTATATTCCACAACATCTTGTTCATCATCCTTATGCCTTAGGTGCTTATGATAAGAAAGCTCCTTCTGGCTTTGTTAGGAATGTTGTTCAAGCTTTTCCAACTCCCCATGAAGAAAACTATGTCTCTATTTTTAGTGATGACAATGTTCATGCTTGTTCCATCATGTAGTTTTATATATCTTTTTCTCGTGCTCGGTCTTGATCTCAATTTCACGCTATCCTTTTTGTTGAACGTCTATGTTCGAGTGGAGATTTGAGCTTTGAACTTTATGACGAGGGATTAACATTGAAGAAATCAACAACTCGGAAGGGATTTTGTCAATCGAGTTGTATATCGTTGTTGTTGCCGTTGTTGGCGATGAAATTAAACCTTTTTTTTTTTTTTTTTATCTCTCTTGTGTAAAATTGTCTATCTAGTGATTATGTGTATGAAATGAAATAGTGTGATTAATGAGAAGGTAGTTGGTTGTTCATTATTTGTAAATGTGAAGGAATATTGAGCATTTCAAA

mRNA sequence

TTTCAATATTATCTCTTTGGTTTTGGATTGTGGGAATAAGAGAAATGGGAGCTCTTGATTATCTTTCCAATTTTTGCATTATCACACCAACAAGAGGCAAACACAAGCCAATGCAGACAGTGGAGATCAAAGTGAAGATGGATTGTGATGGATGTGAAAGAAGAGTTAGAAATGCTGTCACTTCCATGAAAGGAGTAAAGTCAGTGGAAGTGATGAGAAAGCAACATAGAGTAAGGGTAAGTGGTTACGTTGATGCAAACAAAGTGCTAAAAAGAGTAAAAAGCACTGGAAAAAGAGCTGAATTTTGGCCTTATATTCCACAACATCTTGTTCATCATCCTTATGCCTTAGGTGCTTATGATAAGAAAGCTCCTTCTGGCTTTGTTAGGAATGTTGTTCAAGCTTTTCCAACTCCCCATGAAGAAAACTATGTCTCTATTTTTAGTGATGACAATGTTCATGCTTGTTCCATCATGTAGTTTTATATATCTTTTTCTCGTGCTCGGTCTTGATCTCAATTTCACGCTATCCTTTTTGTTGAACGTCTATGTTCGAGTGGAGATTTGAGCTTTGAACTTTATGACGAGGGATTAACATTGAAGAAATCAACAACTCGGAAGGGATTTTGTCAATCGAGTTGTATATCGTTGTTGTTGCCGTTGTTGGCGATGAAATTAAACCTTTTTTTTTTTTTTTTTATCTCTCTTGTGTAAAATTGTCTATCTAGTGATTATGTGTATGAAATGAAATAGTGTGATTAATGAGAAGGTAGTTGGTTGTTCATTATTTGTAAATGTGAAGGAATATTGAGCATTTCAAA

Coding sequence (CDS)

ATGGGAGCTCTTGATTATCTTTCCAATTTTTGCATTATCACACCAACAAGAGGCAAACACAAGCCAATGCAGACAGTGGAGATCAAAGTGAAGATGGATTGTGATGGATGTGAAAGAAGAGTTAGAAATGCTGTCACTTCCATGAAAGGAGTAAAGTCAGTGGAAGTGATGAGAAAGCAACATAGAGTAAGGGTAAGTGGTTACGTTGATGCAAACAAAGTGCTAAAAAGAGTAAAAAGCACTGGAAAAAGAGCTGAATTTTGGCCTTATATTCCACAACATCTTGTTCATCATCCTTATGCCTTAGGTGCTTATGATAAGAAAGCTCCTTCTGGCTTTGTTAGGAATGTTGTTCAAGCTTTTCCAACTCCCCATGAAGAAAACTATGTCTCTATTTTTAGTGATGACAATGTTCATGCTTGTTCCATCATGTAG

Protein sequence

MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQHRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQAFPTPHEENYVSIFSDDNVHACSIM

Homology

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BLAST of Lsi05G002910 vs. Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.3e-55
Identity = 105/149 (70.47%), Postives = 124/149 (83.22%), Query Frame = 1


Query: 1   MGALDYLSNFCIIT--PTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMR 60
           MGA DY+S+FC  T    + K KP+QTV+IKVKMDCDGCERRVRN V  MKGVKSVEV R
Sbjct: 1   MGAFDYISSFCSYTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNR 60

Query: 61  KQHRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVV 120
           KQ R+ V+G+VD NKVLKRVKSTGK+AEFWPYIPQH+V++P+A G YDK+AP+G +RN  
Sbjct: 61  KQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPT 120

Query: 121 QAFPTPH--EENYVSIFSDDNVH-ACSIM 145
           Q+FPT +  EENYVS+FSDDNVH ACSIM
Sbjct: 121 QSFPTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of Lsi05G002910 vs. Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.4e-47
Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1


Query: 1   MGALD----YLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEV 60
           MGALD    Y+S++  +T  R K K MQTV IKVKMDCDGCERRV+NAV+SMKGVKSVEV
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  MRKQHRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVR- 120
            RK H+V VSGYV+  KVLKR++ TGK+AE WPY+P ++V +PYA+G YDKKAP+G+VR 
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRK 120

Query: 121 ---NVVQAFPTPHEENYVSIFSDDNVHACSIM 145
              + +Q  P   E +Y+S+FSD+N +AC++M
Sbjct: 121 SEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

[Close]

BLAST of Lsi05G002910 vs. Swiss-Prot
Match: HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN=HIPP22 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.2e-42
Identity = 88/152 (57.89%), Postives = 112/152 (73.68%), Query Frame = 1


Query: 1   MGALDYLS-----NFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVE 60
           MGAL+YLS     +F +    R K K MQTV IKVK+DCDGCER+++NAV+S+KG KSVE
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  VMRKQHRVRVSGYVDANKVLKRVKSTG-KRAEFWPYIPQHLVHHPYALGAYDKKAPSGFV 120
           V RK H+V VSGYVD  KVLK V+STG K+AE WPY+P  +V +PYA GAYDK+AP GFV
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 R--NVVQAFPTPHEENYVSIFSDDNVHACSIM 145
           R     QA P   ++  +S+FSD+N +AC++M
Sbjct: 121 RKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of Lsi05G002910 vs. Swiss-Prot
Match: HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.5e-35
Identity = 79/153 (51.63%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 1   MGALDYLSNF--CIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMR 60
           MG LD++S    C       K K +QTVEIKVKMDC+GCER+VR +V  MKGV SV +  
Sbjct: 1   MGVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEP 60

Query: 61  KQHRVRVSGYVDANKVLKRVK-STGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNV 120
           K H+V V GYVD NKV+ R+   TGK+ E WPY+P  +V HPYA G YDKKAPSG+VR V
Sbjct: 61  KAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRV 120

Query: 121 VQ------AFPTPHEENYVSIFSDDNVHACSIM 145
                   A  +  E  Y + FSD+N  AC +M
Sbjct: 121 DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of Lsi05G002910 vs. Swiss-Prot
Match: HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN=HIPP27 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-32
Identity = 74/134 (55.22%), Postives = 89/134 (66.42%), Query Frame = 1


Query: 19  KHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQHRVRVSGYVDANKVLKRV 78
           K K  Q VEIKVKMDC+GCERRVR +V  MKGV  V V  KQ ++ V G+V  +KV+ RV
Sbjct: 14  KLKQFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRV 73

Query: 79  -KSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQ-------AFPTPHEENYV 138
              TGK+AE WPY+P  +V HPYA GAYDKKAP G+VRN +        A  +  E  Y 
Sbjct: 74  MHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVKYT 133

Query: 139 SIFSDDNVHACSIM 145
           S FSDDN +AC+IM
Sbjct: 134 SAFSDDNPNACTIM 147

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BLAST of Lsi05G002910 vs. TrEMBL
Match: A0A0A0L636_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185150 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.4e-75
Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDY SNFCI+TPTR KHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ
Sbjct: 1   MGALDYFSNFCIVTPTRTKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
           HRVRV G VDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYA GAYDKKAPSGFVRNVVQA
Sbjct: 61  HRVRVIGNVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYAFGAYDKKAPSGFVRNVVQA 120

Query: 121 FPTPHEENYVSIFSDDNVHACSIM 145
           FPTPHEENYVS FSDDNVHACSIM
Sbjct: 121 FPTPHEENYVSFFSDDNVHACSIM 144

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BLAST of Lsi05G002910 vs. TrEMBL
Match: A0A061EH84_THECC (Heavy metal transport/detoxification superfamily protein OS=Theobroma cacao GN=TCM_019282 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-63
Identity = 122/149 (81.88%), Postives = 130/149 (87.25%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDYLSNFC +T TR K KPMQTVEIKVKMDCDGCERRV+NAVTSMKGVK+VEV RKQ
Sbjct: 1   MGALDYLSNFCTVTSTRSKRKPMQTVEIKVKMDCDGCERRVKNAVTSMKGVKTVEVNRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
            RV VSGYVD NKVLKRVKSTGKRAEFWPYIPQHLV++PY  GAYDK+APSGFVRNVVQA
Sbjct: 61  SRVTVSGYVDPNKVLKRVKSTGKRAEFWPYIPQHLVYYPYVSGAYDKRAPSGFVRNVVQA 120

Query: 121 FPTPH-----EENYVSIFSDDNVHACSIM 145
           FP        EEN+VS FSDDNVHACSI+
Sbjct: 121 FPATSSSNAPEENFVSFFSDDNVHACSII 149

[Close]

BLAST of Lsi05G002910 vs. TrEMBL
Match: A0A067JT09_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02501 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-63
Identity = 120/146 (82.19%), Postives = 131/146 (89.73%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGA+DYLSNFC +T TR K KPMQTVEIKVKMDCDGCERRV+NAV+SM+GVK+VEV RKQ
Sbjct: 1   MGAIDYLSNFCTVTSTRSKRKPMQTVEIKVKMDCDGCERRVKNAVSSMRGVKTVEVNRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
            RV VSGYVD NKVLKRVKSTGKRAEFWPYIPQHLVH+PYA GAYDK+AP+G+VRNVVQA
Sbjct: 61  SRVVVSGYVDPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKRAPAGYVRNVVQA 120

Query: 121 FP--TPHEENYVSIFSDDNVHACSIM 145
           FP  T  E+N  SIFSDDNVHACSIM
Sbjct: 121 FPASTAPEDNIASIFSDDNVHACSIM 146

[Close]

BLAST of Lsi05G002910 vs. TrEMBL
Match: V4ST41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013659mg PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.3e-62
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDYLSNFC +T TR K K MQTVEIKVKMDCDGCERRV+NAV SMKGVKSVEV RKQ
Sbjct: 1   MGALDYLSNFCTVTSTRSKRKAMQTVEIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
            RV VSGYV+ NKVLKRVKSTGKRAEFWPYIPQHLVH+PYA GAYDK+AP+G+VRNVVQA
Sbjct: 61  SRVTVSGYVEPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYAPGAYDKRAPAGYVRNVVQA 120

Query: 121 FPTPH--EENYVSIFSDDNVHACSIM 145
           FP  +  E+N VSIFSDDNV+ACSIM
Sbjct: 121 FPATNAPEDNLVSIFSDDNVNACSIM 146

[Close]

BLAST of Lsi05G002910 vs. TrEMBL
Match: A0A067DAV0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032155mg PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.3e-62
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDYLSNFC +T TR K K MQTVEIKVKMDCDGCERRV+NAV SMKGVKSVEV RKQ
Sbjct: 1   MGALDYLSNFCTVTSTRSKRKAMQTVEIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
            RV VSGYV+ NKVLKRVKSTGKRAEFWPYIPQHLVH+PYA GAYDK+AP+G+VRNVVQA
Sbjct: 61  SRVTVSGYVEPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYAPGAYDKRAPAGYVRNVVQA 120

Query: 121 FPTPH--EENYVSIFSDDNVHACSIM 145
           FP  +  E+N VSIFSDDNV+ACSIM
Sbjct: 121 FPATNAPEDNLVSIFSDDNVNACSIM 146

[Close]

BLAST of Lsi05G002910 vs. TAIR10
Match: AT5G17450.1 (AT5G17450.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 215.3 bits (547), Expect = 2.4e-56
Identity = 105/149 (70.47%), Postives = 124/149 (83.22%), Query Frame = 1


Query: 1   MGALDYLSNFCIIT--PTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMR 60
           MGA DY+S+FC  T    + K KP+QTV+IKVKMDCDGCERRVRN V  MKGVKSVEV R
Sbjct: 1   MGAFDYISSFCSYTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNR 60

Query: 61  KQHRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVV 120
           KQ R+ V+G+VD NKVLKRVKSTGK+AEFWPYIPQH+V++P+A G YDK+AP+G +RN  
Sbjct: 61  KQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPT 120

Query: 121 QAFPTPH--EENYVSIFSDDNVH-ACSIM 145
           Q+FPT +  EENYVS+FSDDNVH ACSIM
Sbjct: 121 QSFPTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of Lsi05G002910 vs. TAIR10
Match: AT1G71050.1 (AT1G71050.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 4.2e-48
Identity = 91/152 (59.87%), Postives = 118/152 (77.63%), Query Frame = 1


Query: 1   MGALD----YLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEV 60
           MGALD    Y+S++  +T  R K K MQTV IKVKMDCDGCERRV+NAV+SMKGVKSVEV
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  MRKQHRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVR- 120
            RK H+V VSGYV+  KVLKR++ TGK+AE WPY+P ++V +PYA+G YDKKAP+G+VR 
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRK 120

Query: 121 ---NVVQAFPTPHEENYVSIFSDDNVHACSIM 145
              + +Q  P   E +Y+S+FSD+N +AC++M
Sbjct: 121 SEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

[Close]

BLAST of Lsi05G002910 vs. TAIR10
Match: AT1G22990.1 (AT1G22990.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-43
Identity = 88/152 (57.89%), Postives = 112/152 (73.68%), Query Frame = 1


Query: 1   MGALDYLS-----NFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVE 60
           MGAL+YLS     +F +    R K K MQTV IKVK+DCDGCER+++NAV+S+KG KSVE
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  VMRKQHRVRVSGYVDANKVLKRVKSTG-KRAEFWPYIPQHLVHHPYALGAYDKKAPSGFV 120
           V RK H+V VSGYVD  KVLK V+STG K+AE WPY+P  +V +PYA GAYDK+AP GFV
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 R--NVVQAFPTPHEENYVSIFSDDNVHACSIM 145
           R     QA P   ++  +S+FSD+N +AC++M
Sbjct: 121 RKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of Lsi05G002910 vs. TAIR10
Match: AT4G39700.1 (AT4G39700.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-38
Identity = 74/134 (55.22%), Postives = 98/134 (73.13%), Query Frame = 1


Query: 17  RGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQHRVRVSGYVDANKVLK 76
           R K K  QTVE+KV+MDCDGC  +++N+++S+KGVK+VE+ +KQ +V VSGY DA+KVLK
Sbjct: 25  RKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLK 84

Query: 77  RVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQAFPTP------HEENYV 136
           + K+TGK+AE WPY+P +LV  PY   AYDKKAP G+VR V     T        + +Y 
Sbjct: 85  KAKATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYVRKVDPNVTTGTMAVYYDDPSYT 144

Query: 137 SIFSDDNVHACSIM 145
           S+FSDDN +ACSIM
Sbjct: 145 SLFSDDNPNACSIM 158

[Close]

BLAST of Lsi05G002910 vs. TAIR10
Match: AT4G38580.1 (AT4G38580.1 farnesylated protein 6)

HSP 1 Score: 148.3 bits (373), Expect = 3.7e-36
Identity = 79/153 (51.63%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 1   MGALDYLSNF--CIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMR 60
           MG LD++S    C       K K +QTVEIKVKMDC+GCER+VR +V  MKGV SV +  
Sbjct: 1   MGVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEP 60

Query: 61  KQHRVRVSGYVDANKVLKRVK-STGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNV 120
           K H+V V GYVD NKV+ R+   TGK+ E WPY+P  +V HPYA G YDKKAPSG+VR V
Sbjct: 61  KAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRV 120

Query: 121 VQ------AFPTPHEENYVSIFSDDNVHACSIM 145
                   A  +  E  Y + FSD+N  AC +M
Sbjct: 121 DDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of Lsi05G002910 vs. NCBI nr
Match: gi|659114516|ref|XP_008457089.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 4.5e-76
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDYLSNFCI+TPTR KHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGV+SVEVMRKQ
Sbjct: 1   MGALDYLSNFCIVTPTRTKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVQSVEVMRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
           HRVRV GYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYA GAYDKKAPSGFVRNVVQA
Sbjct: 61  HRVRVIGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYAFGAYDKKAPSGFVRNVVQA 120

Query: 121 FPTPHEENYVSIFSDDNVHACSIM 145
           FPTPHEENYVS FSDDNVHACSIM
Sbjct: 121 FPTPHEENYVSFFSDDNVHACSIM 144

[Close]

BLAST of Lsi05G002910 vs. NCBI nr
Match: gi|449445961|ref|XP_004140740.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 4.9e-75
Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDY SNFCI+TPTR KHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ
Sbjct: 1   MGALDYFSNFCIVTPTRTKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
           HRVRV G VDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYA GAYDKKAPSGFVRNVVQA
Sbjct: 61  HRVRVIGNVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYAFGAYDKKAPSGFVRNVVQA 120

Query: 121 FPTPHEENYVSIFSDDNVHACSIM 145
           FPTPHEENYVS FSDDNVHACSIM
Sbjct: 121 FPTPHEENYVSFFSDDNVHACSIM 144

[Close]

BLAST of Lsi05G002910 vs. NCBI nr
Match: gi|590652245|ref|XP_007033097.1| (Heavy metal transport/detoxification superfamily protein [Theobroma cacao])

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63
Identity = 122/149 (81.88%), Postives = 130/149 (87.25%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDYLSNFC +T TR K KPMQTVEIKVKMDCDGCERRV+NAVTSMKGVK+VEV RKQ
Sbjct: 1   MGALDYLSNFCTVTSTRSKRKPMQTVEIKVKMDCDGCERRVKNAVTSMKGVKTVEVNRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
            RV VSGYVD NKVLKRVKSTGKRAEFWPYIPQHLV++PY  GAYDK+APSGFVRNVVQA
Sbjct: 61  SRVTVSGYVDPNKVLKRVKSTGKRAEFWPYIPQHLVYYPYVSGAYDKRAPSGFVRNVVQA 120

Query: 121 FPTPH-----EENYVSIFSDDNVHACSIM 145
           FP        EEN+VS FSDDNVHACSI+
Sbjct: 121 FPATSSSNAPEENFVSFFSDDNVHACSII 149

[Close]

BLAST of Lsi05G002910 vs. NCBI nr
Match: gi|802761927|ref|XP_012089916.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas])

HSP 1 Score: 249.2 bits (635), Expect = 4.3e-63
Identity = 120/146 (82.19%), Postives = 131/146 (89.73%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGA+DYLSNFC +T TR K KPMQTVEIKVKMDCDGCERRV+NAV+SM+GVK+VEV RKQ
Sbjct: 1   MGAIDYLSNFCTVTSTRSKRKPMQTVEIKVKMDCDGCERRVKNAVSSMRGVKTVEVNRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
            RV VSGYVD NKVLKRVKSTGKRAEFWPYIPQHLVH+PYA GAYDK+AP+G+VRNVVQA
Sbjct: 61  SRVVVSGYVDPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYASGAYDKRAPAGYVRNVVQA 120

Query: 121 FP--TPHEENYVSIFSDDNVHACSIM 145
           FP  T  E+N  SIFSDDNVHACSIM
Sbjct: 121 FPASTAPEDNIASIFSDDNVHACSIM 146

[Close]

BLAST of Lsi05G002910 vs. NCBI nr
Match: gi|567876135|ref|XP_006430657.1| (hypothetical protein CICLE_v10013659mg [Citrus clementina])

HSP 1 Score: 245.7 bits (626), Expect = 4.8e-62
Identity = 120/146 (82.19%), Postives = 130/146 (89.04%), Query Frame = 1


Query: 1   MGALDYLSNFCIITPTRGKHKPMQTVEIKVKMDCDGCERRVRNAVTSMKGVKSVEVMRKQ 60
           MGALDYLSNFC +T TR K K MQTVEIKVKMDCDGCERRV+NAV SMKGVKSVEV RKQ
Sbjct: 1   MGALDYLSNFCTVTSTRSKRKAMQTVEIKVKMDCDGCERRVKNAVNSMKGVKSVEVNRKQ 60

Query: 61  HRVRVSGYVDANKVLKRVKSTGKRAEFWPYIPQHLVHHPYALGAYDKKAPSGFVRNVVQA 120
            RV VSGYV+ NKVLKRVKSTGKRAEFWPYIPQHLVH+PYA GAYDK+AP+G+VRNVVQA
Sbjct: 61  SRVTVSGYVEPNKVLKRVKSTGKRAEFWPYIPQHLVHYPYAPGAYDKRAPAGYVRNVVQA 120

Query: 121 FPTPH--EENYVSIFSDDNVHACSIM 145
           FP  +  E+N VSIFSDDNV+ACSIM
Sbjct: 121 FPATNAPEDNLVSIFSDDNVNACSIM 146

The following BLAST results are available for this feature:

BLAST of Lsi05G002910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HIP21_ARATH	4.3e-55	70.47	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN...	[more]
HIP20_ARATH	7.4e-47	59.87	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN...	[more]
HIP22_ARATH	3.2e-42	57.89	Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN...	[more]
HIP26_ARATH	6.5e-35	51.63	Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN...	[more]
HIP27_ARATH	1.0e-32	55.22	Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN...	[more]

BLAST of Lsi05G002910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L636_CUCSA	3.4e-75	95.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185150 PE=4 SV=1	[more]
A0A061EH84_THECC	1.4e-63	81.88	Heavy metal transport/detoxification superfamily protein OS=Theobroma cacao GN=T...	[more]
A0A067JT09_JATCU	3.0e-63	82.19	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02501 PE=4 SV=1	[more]
V4ST41_9ROSI	3.3e-62	82.19	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013659mg PE=4 SV=1	[more]
A0A067DAV0_CITSI	3.3e-62	82.19	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032155mg PE=4 SV=1	[more]

BLAST of Lsi05G002910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17450.1	2.4e-56	70.47	Heavy metal transport/detoxification superfamily protein	[more]
AT1G71050.1	4.2e-48	59.87	Heavy metal transport/detoxification superfamily protein	[more]
AT1G22990.1	1.8e-43	57.89	Heavy metal transport/detoxification superfamily protein	[more]
AT4G39700.1	3.0e-38	55.22	Heavy metal transport/detoxification superfamily protein	[more]
AT4G38580.1	3.7e-36	51.63	farnesylated protein 6	[more]

BLAST of Lsi05G002910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114516\|ref\|XP_008457089.1\|	4.5e-76	95.83	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis melo]	[more]
gi\|449445961\|ref\|XP_004140740.1\|	4.9e-75	95.14	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis sativu...	[more]
gi\|590652245\|ref\|XP_007033097.1\|	1.9e-63	81.88	Heavy metal transport/detoxification superfamily protein [Theobroma cacao]	[more]
gi\|802761927\|ref\|XP_012089916.1\|	4.3e-63	82.19	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curca...	[more]
gi\|567876135\|ref\|XP_006430657.1\|	4.8e-62	82.19	hypothetical protein CICLE_v10013659mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046916	cellular transition metal ion homeostasis
biological_process	GO:0030001	metal ion transport
biological_process	GO:0055073	cadmium ion homeostasis
biological_process	GO:0071585	detoxification of cadmium ion
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046914	transition metal ion binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002910.1	Lsi05G002910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 29..83 score: 2.8
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 32..87 score: 10
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 22..89 score: 2.09
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 22..89 score: 8.8
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 12..143 score: 1.8
None	No IPR available	PANTHER	PTHR22814:SF47	SUBFAMILY NOT NAMED	coord: 12..143 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002910	Csa3G185150	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002910	CSPI03G17510	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002910	Cucsa.108360	Cucumber (Gy14) v1	cgylsiB144
Lsi05G002910	CmaCh14G008590	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G002910	CmoCh14G008730	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G002910	CmoCh01G003670	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G002910	Cla013160	Watermelon (97103) v1	lsiwmB361
Lsi05G002910	MELO3C020306	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002910	ClCG05G010830	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002910	MELO3C020306.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002910	Cla97C05G093140	Watermelon (97103) v2	lsiwmbB329
Lsi05G002910	Bhi01G001336	Wax gourd	lsiwgoB431
Lsi05G002910	Cp4.1LG02g16740	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G002910	CsGy3G017540	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002910	Carg24232	Silver-seed gourd	carlsiB158
Lsi05G002910	Carg07439	Silver-seed gourd	carlsiB700
Lsi05G002910	CsaV3_3G017680	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002910	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G002910	Cucumber (Chinese Long) v3	cuclsiB231
Lsi05G002910	Cucumber (Gy14) v1	cgylsiB322
Lsi05G002910	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G002910	Cucurbita pepo (Zucchini)	cpelsiB511