CmaCh01G003450 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G003450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_8
Location	Cma_Chr01 : 1715684 .. 1718318 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGTTACAGAAATCTACCATTTCGGAGCAATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTCCATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTTTGAATCGCACTTCGAAACTGAGTGCAAATTCGCCGAAAATATATAGAATCCGTAGCTCTGCGAATTCTAGCAATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTTAATCATCCTCGAGCTTGCCGATTTCACACTGCTCATTTTGGAGGTAACGCCCTAAGTTGTTTGTAGTTCTTCCGATTTCATTTCCGCTTTTCGTTTCTGTGATGTACAATTTGAGTGTGTTAAAAGGTTTAGTTTCTTCTCTGCTTTTGATTTGATTATGATTTGTAGTCACCGTTTAGTCAGTTGTACAATGTGCTTCTTGATGGAAACTGGAAATTACATACTTCAATGTATGATTTTGTTTGCATTCCCAATAATCCTACCCTTAATAGGCATTCCATCTGTCCAATTATCTGGCTTCACCTAGAGTTTGCTCTCATTCAGGACATAACTCTTCTTTAGAGTACACCTCGTATTCGATAGAGCTCCACCACTAATCGCATTGTGGATTACACGACGTAGATCATTCCTTAGCATACCCTTAGCAATCCTCCCCTCAAACACACTTGTTTGACATTTGAGGATTCATCCACAATCCTACATGACTATGTCTATTTGAGACTTATCACTTTGTTAGGTATTCGAGAATTTTACTAGACATGGCTAAGTTAGGGGCATGGTTCTTATACCACTTATCATGGACATAATCTTCCTATCGTGTGATGCCATGATATACCCTCACTCGTGGCTATTCTTGAGGTGAACTCAAACCCCAACTTTTTCACCCTTTTTGTGGCTTCTTCGGACCTTAGGCGAGGTTCCTTTGTCCTCAATCAAGTTTTATTTCATGTTCAACGCAGCTTTCTTCGGACCTTATGTGATAGGTTTGCATTCCTAACCTTCTCTTCAATTACGTTTTGGTACTTATTTCATACTTATTTCATAGTTTAAGTCCCTAGTTTTTACTTACAAAATGCCATATTAGTCCTTAAAATTTTAACAAGTAACAACTTTGGTCCTGTCAGGACCAAAATGATTACTTTTTAAAATTTAGGGACTGAAATTGACATTTTGAAAATCAAGAATCATGTTGAAATAATCCTAATAATCGAGGAACCAAAATCTTAACATCCAAAGTTAGTTGTGTTTTGTTCAACTTCATAGCCATTTTGCGTTTCCATTTGTACAATTTAAATGCGTTTATTTAAAGCTTTGGTTGCTGCTCAGCTCTTGATTATCCATGATTTGTAATACTTATGTCATTTGTAATCAAGGTGCTGCTTGATGGACACTGTAAATTGAAGGTTTATAACCTATTCTCATCAATTTACTTTTGGTACTTCTTTTACTTCAAATACTTGTAGATATCTGTTCATGATGCAAACAAATTAAACTTGTGTTGTGTTAGGTCTCCGTTACATTATATACAAAAATATCATGATCAGGGGTTAAATAGTTTTTCTTACGAAGTTAGAAGTAGAATATATGAAAGATTAGTAGGAACTTCCTAAACTGAAATAAGTTAAAAAAAAATTGGATTTGGATCCAAATTCTAGCTCTTTACCACTGATGACTTTTGTGGACTCTGCAAGTAAAAGCCTTCTGCTTTCCTTTCTGATTGAGTTGCTTTAAACAATAGCTTTAATCGCTTGGATTTTGAAAGCATTTACAACAACGAAACAAAGAACAAAAAACAAATAGGTATCAAACATGGCCTTAGAAATTGTGAATAATTCAAACCTTGTGTATAACCAAATTTATGCTGACTGATATCGATTGGATTATCGAAAGACTGAGATTGACTGTGAAACTCAAAAATGTTATGTTGAATCACTCAAAACGAGAAGGTTTGAATAATTTTGAGGATTGGAAATAGACTACAATTCAATTTACTACTTCAAGTCATTCTTGATTTCTTTCTGAAAGTCCAAGTTCCAACTTCTCGAGTCACTACTTGATTCCTACCTTGATTTGCACGTATTTTCTGCTCAAAACATAACCTATTCCTGTGTTGTTCTTTCTTTATACAGGTGAAACAAAGCGTAAGTTTGAAAGTGTACACACAGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTACAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACCGCTGCTCCACACTCGTCCTACGACGACGTTTAATACCATAGATCGAACCGACAACCTTTCTCAAGGTCCCCTTCTTTCATGCAAGTCTTTAATTTCCTTTTCGTCATGAAATCATGTGTACATATTCATATCCTATCTGAAATGTTGGGTGGGGTAAAAAAAGATTTATCATCTTTTATTTGGAAATTAAGAGAATATCATTTTCGAAGATATATAAGTTTCAATTTATGTCTTCCTATTATGTAAAATATATCATATTTTCTGGTCATGATTCTCACATATACCTCTTGAAACTGTCATTCTCAAACTCTGGATCATGATCTTTTCTTTCTTTCTTTTTGATGCAATAAATGG

mRNA sequence

ATGACTGTTACAGAAATCTACCATTTCGGAGCAATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTCCATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTTTGAATCGCACTTCGAAACTGAGTGCAAATTCGCCGAAAATATATAGAATCCGTAGCTCTGCGAATTCTAGCAATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTTAATCATCCTCGAGCTTGCCGATTTCACACTGCTCATTTTGGAGGTGAAACAAAGCGTAAGTTTGAAAGTGTACACACAGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTACAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACCGCTGCTCCACACTCGTCCTACGACGACGTTTAATACCATAGATCGAACCGACAACCTTTCTCAAGGTCCCCTTCTTTCATGCAAGTCTTTAATTTCCTTTTCGTCATGAAATCATGTGTACATATTCATATCCTATCTGAAATGTTGGGTGGGGTAAAAAAAGATTTATCATCTTTTATTTGGAAATTAAGAGAATATCATTTTCGAAGATATATAAGTTTCAATTTATGTCTTCCTATTATGTAAAATATATCATATTTTCTGGTCATGATTCTCACATATACCTCTTGAAACTGTCATTCTCAAACTCTGGATCATGATCTTTTCTTTCTTTCTTTTTGATGCAATAAATGG

Coding sequence (CDS)

ATGACTGTTACAGAAATCTACCATTTCGGAGCAATGGCTCTAAATCTCCATTGTTGCTGTTTATCAGCTCGTTTCATTTCTTTCCATTCAGAAGTTAGAGATTTTCGTTCCGGTTGTTTGAATCGCACTTCGAAACTGAGTGCAAATTCGCCGAAAATATATAGAATCCGTAGCTCTGCGAATTCTAGCAATCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCTTCCCTTAATCATCCTCGAGCTTGCCGATTTCACACTGCTCATTTTGGAGGTGAAACAAAGCGTAAGTTTGAAAGTGTACACACAGGAGGAACAATGGACACTCCAGACTCTGGCAAAGTCTTACAATACTGGCATTGCTGTGGGTCTGAGGATCCTTTTGATCCGGGATGTACCGCTGCTCCACACTCGTCCTACGACGACGTTTAA

Protein sequence

MTVTEIYHFGAMALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDDV

Homology

[Close]

BLAST of CmaCh01G003450 vs. TrEMBL
Match: A0A0A0L8V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185090 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.5e-61
Identity = 114/136 (83.82%), Postives = 120/136 (88.24%), Query Frame = 1


Query: 12  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTC 71
           MA NLHC   SA FIS HS+    RS  LNRTSKLS+NSPKI  IR SANS+NQLTLRTC
Sbjct: 1   MAPNLHCYHSSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTC 60

Query: 72  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 131
           RNCKAQFDPSLNHPRACRFHT+HFGGETKRKFESVH+GGTMDTPDSGKV QYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 132 PFDPGCTAAPHSSYDD 148
           PFDPGCTA+PHSSYDD
Sbjct: 121 PFDPGCTASPHSSYDD 136

[Close]

BLAST of CmaCh01G003450 vs. TrEMBL
Match: V4S8S6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013088mg PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43
Identity = 80/98 (81.63%), Postives = 90/98 (91.84%), Query Frame = 1


Query: 50  SPKIYRIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG 109
           SPK+  I+ SA+++N  +LRTC+NCK Q+DP LNHPRACRFHTAHFGGETKRKFESV+TG
Sbjct: 37  SPKLTPIQCSASANNGSSLRTCKNCKTQYDPLLNHPRACRFHTAHFGGETKRKFESVYTG 96

Query: 110 GTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           GTMDTPDSG+V QYWHCCGSEDPFDPGCTAAPHSSYDD
Sbjct: 97  GTMDTPDSGEVFQYWHCCGSEDPFDPGCTAAPHSSYDD 134

[Close]

BLAST of CmaCh01G003450 vs. TrEMBL
Match: A0A067FIY9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032756mg PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43
Identity = 80/98 (81.63%), Postives = 90/98 (91.84%), Query Frame = 1


Query: 50  SPKIYRIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTG 109
           SPK+  I+ SA+++N  +LRTC+NCK Q+DP LNHPRACRFHTAHFGGETKRKFESV+TG
Sbjct: 37  SPKLTPIQCSASANNGSSLRTCKNCKTQYDPLLNHPRACRFHTAHFGGETKRKFESVYTG 96

Query: 110 GTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           GTMDTPDSG+V QYWHCCGSEDPFDPGCTAAPHSSYDD
Sbjct: 97  GTMDTPDSGEVFQYWHCCGSEDPFDPGCTAAPHSSYDD 134

[Close]

BLAST of CmaCh01G003450 vs. TrEMBL
Match: W9S912_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027126 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43
Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 1


Query: 52  KIYRIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT 111
           K   +R S +   + TLRTC+NCK QFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT
Sbjct: 24  KFLPLRCSVDPIKKATLRTCKNCKTQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT 83

Query: 112 MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           MDTPDSG+V QYWHCCGSEDPFDPGCTAAPHSSYDD
Sbjct: 84  MDTPDSGRVFQYWHCCGSEDPFDPGCTAAPHSSYDD 119

[Close]

BLAST of CmaCh01G003450 vs. TrEMBL
Match: M5WRC7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013468mg PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43
Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 52  KIYRIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT 111
           ++   R SA  SN++ LRTC+NCK QFDPS+N+PRACRFHTAHFGGETKRKFESVHTGGT
Sbjct: 26  RLAAFRCSATPSNEIILRTCKNCKTQFDPSINNPRACRFHTAHFGGETKRKFESVHTGGT 85

Query: 112 MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           M+TPDSGKV+QYWHCCGSEDPFDPGCTAAPHSSYDD
Sbjct: 86  MNTPDSGKVVQYWHCCGSEDPFDPGCTAAPHSSYDD 121

[Close]

BLAST of CmaCh01G003450 vs. TAIR10
Match: AT5G38060.1 (AT5G38060.1 unknown protein)

HSP 1 Score: 170.2 bits (430), Expect = 9.3e-43
Identity = 77/106 (72.64%), Postives = 91/106 (85.85%), Query Frame = 1


Query: 42  RTSKLSANSPKIYRIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKR 101
           +T KL  NS + +   ++++S    TLRTC+NCK QFDP LN+PRACRFHTAHFGGETKR
Sbjct: 31  KTPKL--NSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTAHFGGETKR 90

Query: 102 KFESVHTGGTMDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           KFESV+TGGTMDTP+SGKVLQYWHCCGSEDPFD GCTA+PH++YDD
Sbjct: 91  KFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 134

[Close]

BLAST of CmaCh01G003450 vs. TAIR10
Match: AT1G65000.1 (AT1G65000.1 unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08
Identity = 28/83 (33.73%), Postives = 40/83 (48.19%), Query Frame = 1


Query: 69  RTCRNCKAQFDPSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMDTPDSGKVLQYW 128
           + C+ CK  +    N   +CRFH + F      + KR +E       +   D     +++
Sbjct: 8   KLCQRCKQSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYE-------LKPDDPPYAAKFY 67

Query: 129 HCCGSEDPFDPGCTAAPHSSYDD 148
            CCG+EDP  PGC   PH SYDD
Sbjct: 68  DCCGAEDPNAPGCVTNPHISYDD 83

[Close]

BLAST of CmaCh01G003450 vs. NCBI nr
Match: gi|449445965|ref|XP_004140742.1| (PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-60
Identity = 114/136 (83.82%), Postives = 120/136 (88.24%), Query Frame = 1


Query: 12  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTC 71
           MA NLHC   SA FIS HS+    RS  LNRTSKLS+NSPKI  IR SANS+NQLTLRTC
Sbjct: 1   MAPNLHCYHSSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTC 60

Query: 72  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 131
           RNCKAQFDPSLNHPRACRFHT+HFGGETKRKFESVH+GGTMDTPDSGKV QYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 132 PFDPGCTAAPHSSYDD 148
           PFDPGCTA+PHSSYDD
Sbjct: 121 PFDPGCTASPHSSYDD 136

[Close]

BLAST of CmaCh01G003450 vs. NCBI nr
Match: gi|659114539|ref|XP_008457102.1| (PREDICTED: uncharacterized protein LOC103496857 [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-53
Identity = 106/136 (77.94%), Postives = 110/136 (80.88%), Query Frame = 1


Query: 12  MALNLHCCCLSARFISFHSEVRDFRSGCLNRTSKLSANSPKIYRIRSSANSSNQLTLRTC 71
           MA NLHC   S  FIS HS     RS     TSK  +NS K   IR SANS+NQLTLRTC
Sbjct: 1   MAPNLHCYHSSPPFISLHSYPLVLRSHAPYPTSKHCSNSLKFLSIRCSANSNNQLTLRTC 60

Query: 72  RNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDSGKVLQYWHCCGSED 131
           RNCK+QFDPSLNHPRACRFHTAHFGGETKRKFESVH GGTMDTPDSGKV QYWHCCGSED
Sbjct: 61  RNCKSQFDPSLNHPRACRFHTAHFGGETKRKFESVHLGGTMDTPDSGKVFQYWHCCGSED 120

Query: 132 PFDPGCTAAPHSSYDD 148
           PFDPGCTA+PHSSYDD
Sbjct: 121 PFDPGCTASPHSSYDD 136

[Close]

BLAST of CmaCh01G003450 vs. NCBI nr
Match: gi|694392693|ref|XP_009371815.1| (PREDICTED: uncharacterized protein LOC103961034 [Pyrus x bretschneideri])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 58  SSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDS 117
           S+A  SNQ+T RTC+NCK QFDPSLN+PRACRFHTAHFGGETKRKFESVHTGGTM+TPDS
Sbjct: 36  SAAEPSNQITFRTCKNCKTQFDPSLNNPRACRFHTAHFGGETKRKFESVHTGGTMNTPDS 95

Query: 118 GKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           GKV+QYWHCCGSEDPFDPGCTAAPHSSYDD
Sbjct: 96  GKVVQYWHCCGSEDPFDPGCTAAPHSSYDD 125

[Close]

BLAST of CmaCh01G003450 vs. NCBI nr
Match: gi|657978720|ref|XP_008381303.1| (PREDICTED: uncharacterized protein LOC103444163 [Malus domestica])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 80/90 (88.89%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 58  SSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGTMDTPDS 117
           S+A  SNQ+T RTC+NCK QFDPSLN+PRACRFHTAHFGGETKRKFESVHTGGTM+TPDS
Sbjct: 36  SAAEPSNQITFRTCKNCKTQFDPSLNNPRACRFHTAHFGGETKRKFESVHTGGTMNTPDS 95

Query: 118 GKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           GKV+QYWHCCGSEDPFDPGCTAAPHSSYDD
Sbjct: 96  GKVVQYWHCCGSEDPFDPGCTAAPHSSYDD 125

[Close]

BLAST of CmaCh01G003450 vs. NCBI nr
Match: gi|645246382|ref|XP_008229328.1| (PREDICTED: uncharacterized protein LOC103328698 [Prunus mume])

HSP 1 Score: 183.3 bits (464), Expect = 3.0e-43
Identity = 79/96 (82.29%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 52  KIYRIRSSANSSNQLTLRTCRNCKAQFDPSLNHPRACRFHTAHFGGETKRKFESVHTGGT 111
           ++   R SA  SN++ LRTC+NCK QFDPS+N+PRACRFHTAHFGGETKRKFESVHTGGT
Sbjct: 26  RLAAFRCSAKPSNEIILRTCKNCKTQFDPSINNPRACRFHTAHFGGETKRKFESVHTGGT 85

Query: 112 MDTPDSGKVLQYWHCCGSEDPFDPGCTAAPHSSYDD 148
           M+TPDSGKV+QYWHCCGSEDPFDPGCTAAPHSSYDD
Sbjct: 86  MNTPDSGKVVQYWHCCGSEDPFDPGCTAAPHSSYDD 121

The following BLAST results are available for this feature:

BLAST of CmaCh01G003450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G003450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8V5_CUCSA	8.5e-61	83.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185090 PE=4 SV=1	[more]
V4S8S6_9ROSI	2.1e-43	81.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013088mg PE=4 SV=1	[more]
A0A067FIY9_CITSI	2.1e-43	81.63	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032756mg PE=4 SV=1	[more]
W9S912_9ROSA	2.1e-43	83.33	Uncharacterized protein OS=Morus notabilis GN=L484_027126 PE=4 SV=1	[more]
M5WRC7_PRUPE	2.1e-43	82.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013468mg PE=4 SV=1	[more]

BLAST of CmaCh01G003450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38060.1	9.3e-43	72.64	unknown protein	[more]
AT1G65000.1	1.5e-08	33.73	unknown protein	[more]

BLAST of CmaCh01G003450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445965\|ref\|XP_004140742.1\|	1.2e-60	83.82	PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus]	[more]
gi\|659114539\|ref\|XP_008457102.1\|	1.1e-53	77.94	PREDICTED: uncharacterized protein LOC103496857 [Cucumis melo]	[more]
gi\|694392693\|ref\|XP_009371815.1\|	1.3e-43	88.89	PREDICTED: uncharacterized protein LOC103961034 [Pyrus x bretschneideri]	[more]
gi\|657978720\|ref\|XP_008381303.1\|	1.3e-43	88.89	PREDICTED: uncharacterized protein LOC103444163 [Malus domestica]	[more]
gi\|645246382\|ref\|XP_008229328.1\|	3.0e-43	82.29	PREDICTED: uncharacterized protein LOC103328698 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003450.1	CmaCh01G003450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35106	FAMILY NOT NAMED	coord: 10..148 score: 6.4
None	No IPR available	PANTHER	PTHR35106:SF2	EXPRESSED PROTEIN	coord: 10..148 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G003450	Cla013152	Watermelon (97103) v1	cmawmB434
CmaCh01G003450	MELO3C020311	Melon (DHL92) v3.5.1	cmameB431
CmaCh01G003450	CmoCh01G003630	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G003450	Lsi05G002820	Bottle gourd (USVL1VR-Ls)	cmalsiB440
CmaCh01G003450	Cp4.1LG02g16770	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G003450	MELO3C020311.2	Melon (DHL92) v3.6.1	cmamedB496
CmaCh01G003450	Bhi01G001329	Wax gourd	cmawgoB0559
CmaCh01G003450	Carg07437	Silver-seed gourd	carcmaB1059

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G003450	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G003450	Wild cucumber (PI 183967)	cmacpiB461
CmaCh01G003450	Cucumber (Chinese Long) v2	cmacuB458
CmaCh01G003450	Watermelon (Charleston Gray)	cmawcgB407
CmaCh01G003450	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G003450	Cucumber (Gy14) v2	cgybcmaB368
CmaCh01G003450	Cucumber (Gy14) v2	cgybcmaB371
CmaCh01G003450	Silver-seed gourd	carcmaB0241
CmaCh01G003450	Cucumber (Chinese Long) v3	cmacucB0547
CmaCh01G003450	Cucumber (Chinese Long) v3	cmacucB0550
CmaCh01G003450	Watermelon (97103) v2	cmawmbB473
CmaCh01G003450	Cucurbita maxima (Rimu)	cmacmaB255
CmaCh01G003450	Cucumber (Gy14) v1	cgycmaB0250
CmaCh01G003450	Cucumber (Gy14) v1	cgycmaB0551