Cla013152 (gene) Watermelon (97103) v1

NameCla013152
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 11611408 .. 11613791 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTCAATCTTCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATACAAAAGTTCAAGTTCTTCGCTCCGATAGTCTGAATCCAACTTCGAAACTGAGTTCAAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGTGGACTCAAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCCGCCCTCAATCACCCACGAGCTTGTCGATTTCACACTGCACATTTTGGAGGTAATGCCCTAACTTATTTGTAACTTTCTCCAATTTCGTAGCCATTTTGCGTTTCTGTTTTTTTACAATTTGAATGTGTTAAGGGATTTGGTTGCTGATCGGCTCTTGGTTTATTTATTATTTGTAATCCCTGTTTAGTTTGTTGTAAACAAGGTGCTATGTCAATTCATGGAACTGGAAATTGAATGTTCACACTTTTGGATTTACTTCAAATACTTGCAGATATCTATTCTTGATGTGGACAAACTAAACATGTGTTATGGTAGGTCTCTGTTGCATGATATACAAACATCTAATGATAAGAGTAAAATAGCAGTATGATGTAGGTATGAAAGTTTAGGAATTAAAGTGGAATAAGTTAGCATGTTTGATAACCATTTCGGCTCCATTTGATAACATTTTCATATTGAGTTGTATGTTTTTGAAATTTTTTCTTGTTTGCTTCCAATTTTTCAACTATGGTTTTCACCTTCCATAAAGAAACATTGAGTTCATTGTCAATTCTGAAAACAGAAGCTACTTTTTTAAAACTACATTCTTTTTAGTTTTTAAAATATGATTTAGTTTTTGAAAACATCAGAAGAAAACTAATTACAAAGCATAGAAACTCATGGGTGGAAGTAGTGTTTATAAGTTTAATTTTCAGAAAACAAAAAAACCAAAAACCAAATGGTTATAAAATAGGGCCTTAGAATTATGTTTGATTTTCTTTGGCTTTCTTTAGTTTTTTTTGAGACCTCTGGTTTGCTTTGTTTTGCTTATTAGATTTATTTGTTTTTCTTTTCTCTCTACCTTGTAGAGTTTGTATGCTTGACCACTAGTCTCTTTTTATTTTATCAATGAAAAGTTTAATTTCTTGTACAATAAAAGAATATTTATATATTTACTTCTTCATTAACTTATTTGTTTTGTTATCTACTTTCTAAGAATGTTTTCCATTTCCAAGGCAAACTTTGTAAACCAAAAAAAGTTGTCTTTTCGAAACTTATTTCTTTATTTTGGAATTTGGCTCAGAATTCAAACATTTCTTTAAGAGAAATGAAAACTATAGTAAAGAAGATGTGAGGAAAAAAACATAATTTTCAAACAAAAAATGAAGGTTGGGCAATCATTTGGTTTTGAAAATTAAGCCTATTTCTTCTCAATTTCTTACAATGGTTTGCATCTTTCTTAAGGAAAAGAGTTGGGTTCTTAGCCAAATTCCAAAAACAAAAACAAGTTTTTAAAAACTATTTATTCTAGTTCTCATAACTTGGCTTGGTTTTTTAAAACATTGGAAAAAAGTAGACAACAAAGCATAGAGGTAGGAGTGTTTATAGGCTTAATTTTTAAAAACTAACAACCAAATGGTTATCAAATGAGGTCAAAATCATTGTCAAATGTGGCCTTGAAATTCGGGGATATCAAATTTATGTCTATTTACTACTGATGACTTTCTTGAACTTTGCAAATAATGACCATCTGTTTTTCCCTTTCGGTTGAGTCTCCTTAAACAATAGCTTCCAGCATTATCTTTAAATCTTAATTCTTAGCTATCAGGTACCAAAAACAAGAGCATGATGTTAATGCCTTCACAGGATTAAATGTATCTTATGAGTGTGTGTGTGTGTGTGATTATTGGAGGATTAAATGCCTAGTATTGCAAAGTCTTTCTTTTGATGCTTGTCTACACAGCCGCAAGTTGAAATGTTAAACATTGTGCATACTTCAAACATAACGAAATACATGCCGATTGATATCGATCAAAAGAGGCAAAGGTTCGAGATTGACTGTGAAAACTCGTAAATGCTTTGTGGCTCTTTAGTACCTGAAATGTTTTTGGATACTTTGAAGATTGAGAACAGACTGCAATGCATATTACTACTTAAAATCATTCTTGACTTTTTTCTGAAAGGTCCAAGTTCTAACTTTTGGAGTCATAAGTCATTATTTTGCTTCTCAAGATTTTAATCCATTCCTTTTTCTTACAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGAACAATGGACACTCCAAACCCTGGCAAAGTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTTTGCACTTGTCCTATGACGATGATTAA

mRNA sequence

ATGGCTCTCAATCTTCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATACAAAAGTTCAAGTTCTTCGCTCCGATAGTCTGAATCCAACTTCGAAACTGAGTTCAAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGTGGACTCAAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCCGCCCTCAATCACCCACGAGCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGAACAATGGACACTCCAAACCCTGGCAAAGTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTTTGCACTTGTCCTATGACGATGATTAA

Coding sequence (CDS)

ATGGCTCTCAATCTTCATTGTTACCATTCATCAGCTCGCTTCCTTTCTCTCCATACAAAAGTTCAAGTTCTTCGCTCCGATAGTCTGAATCCAACTTCGAAACTGAGTTCAAATTCGCCCAAATTCCTCAGAATTCGAAGCTCCGTGGACTCAAACAACCAATTGACGCTTAGAACTTGCAGGAATTGCAAGGCGCAATTTGATCCCGCCCTCAATCACCCACGAGCTTGTCGATTTCACACTGCACATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACTCAGGAGGAACAATGGACACTCCAAACCCTGGCAAAGTTTTTCAATACTGGCATTGTTGTGGGTCTGAGGATCCTTTCGATCCGGGATGTACTGCTTCTTTGCACTTGTCCTATGACGATGATTAA

Protein sequence

MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLHLSYDDD
BLAST of Cla013152 vs. TrEMBL
Match: A0A0A0L8V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185090 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-65
Identity = 118/137 (86.13%), Postives = 125/137 (91.24%), Query Frame = 1

Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MA NLHCYHSSA F+SLH+K  VLRSD+LN TSKLSSNSPK L IR S +SNNQLTLRTC
Sbjct: 1   MAPNLHCYHSSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHT+HFGGETKRKFESVHSGGTMDTP+ GKVFQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

BLAST of Cla013152 vs. TrEMBL
Match: W9S912_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027126 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.3e-43
Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 1

Query: 29  LNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPALNHPRACRFHTAHFGGET 88
           L P+ +      KFL +R SVD   + TLRTC+NCK QFDP+LNHPRACRFHTAHFGGET
Sbjct: 12  LRPSHQNPKPISKFLPLRCSVDPIKKATLRTCKNCKTQFDPSLNHPRACRFHTAHFGGET 71

Query: 89  KRKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLHLSYDD 137
           KRKFESVH+GGTMDTP+ G+VFQYWHCCGSEDPFDPGCTA+ H SYDD
Sbjct: 72  KRKFESVHTGGTMDTPDSGRVFQYWHCCGSEDPFDPGCTAAPHSSYDD 119

BLAST of Cla013152 vs. TrEMBL
Match: A0A067FIY9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032756mg PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.2e-42
Identity = 82/125 (65.60%), Postives = 94/125 (75.20%), Query Frame = 1

Query: 12  ARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPAL 71
           A F SLH          L P + +   SPK   I+ S  +NN  +LRTC+NCK Q+DP L
Sbjct: 11  ASFPSLHRISPTSSQTRLRPVT-IFKCSPKLTPIQCSASANNGSSLRTCKNCKTQYDPLL 70

Query: 72  NHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLH 131
           NHPRACRFHTAHFGGETKRKFESV++GGTMDTP+ G+VFQYWHCCGSEDPFDPGCTA+ H
Sbjct: 71  NHPRACRFHTAHFGGETKRKFESVYTGGTMDTPDSGEVFQYWHCCGSEDPFDPGCTAAPH 130

Query: 132 LSYDD 137
            SYDD
Sbjct: 131 SSYDD 134

BLAST of Cla013152 vs. TrEMBL
Match: V4S8S6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013088mg PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.2e-42
Identity = 82/125 (65.60%), Postives = 94/125 (75.20%), Query Frame = 1

Query: 12  ARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPAL 71
           A F SLH          L P + +   SPK   I+ S  +NN  +LRTC+NCK Q+DP L
Sbjct: 11  ASFPSLHRISPTSSQTRLRPVT-IFKCSPKLTPIQCSASANNGSSLRTCKNCKTQYDPLL 70

Query: 72  NHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLH 131
           NHPRACRFHTAHFGGETKRKFESV++GGTMDTP+ G+VFQYWHCCGSEDPFDPGCTA+ H
Sbjct: 71  NHPRACRFHTAHFGGETKRKFESVYTGGTMDTPDSGEVFQYWHCCGSEDPFDPGCTAAPH 130

Query: 132 LSYDD 137
            SYDD
Sbjct: 131 SSYDD 134

BLAST of Cla013152 vs. TrEMBL
Match: A0A067JFQ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02509 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.1e-42
Identity = 80/107 (74.77%), Postives = 90/107 (84.11%), Query Frame = 1

Query: 31  PTSKLSSNSPKFLRIR-SSVDSNNQLTLRTCRNCKAQFDPALNHPRACRFHTAHFGGETK 90
           PT+     SP+   IR SS++ N   TLRTC+NCK QFDP+LNHPRACRFHTAHFGGETK
Sbjct: 31  PTATPRIESPRLPVIRCSSINPNGNETLRTCKNCKTQFDPSLNHPRACRFHTAHFGGETK 90

Query: 91  RKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLHLSYDD 137
           RKFESV+SGGTMDTP+ G+VFQYWHCCGSEDPFDPGCTA+ H SYDD
Sbjct: 91  RKFESVYSGGTMDTPDSGQVFQYWHCCGSEDPFDPGCTAAPHSSYDD 137

BLAST of Cla013152 vs. NCBI nr
Match: gi|449445965|ref|XP_004140742.1| (PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 2.0e-65
Identity = 118/137 (86.13%), Postives = 125/137 (91.24%), Query Frame = 1

Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MA NLHCYHSSA F+SLH+K  VLRSD+LN TSKLSSNSPK L IR S +SNNQLTLRTC
Sbjct: 1   MAPNLHCYHSSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSED 120
           RNCKAQFDP+LNHPRACRFHT+HFGGETKRKFESVHSGGTMDTP+ GKVFQYWHCCGSED
Sbjct: 61  RNCKAQFDPSLNHPRACRFHTSHFGGETKRKFESVHSGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

BLAST of Cla013152 vs. NCBI nr
Match: gi|659114539|ref|XP_008457102.1| (PREDICTED: uncharacterized protein LOC103496857 [Cucumis melo])

HSP 1 Score: 238.4 bits (607), Expect = 7.3e-60
Identity = 111/137 (81.02%), Postives = 118/137 (86.13%), Query Frame = 1

Query: 1   MALNLHCYHSSARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTC 60
           MA NLHCYHSS  F+SLH+   VLRS +  PTSK  SNS KFL IR S +SNNQLTLRTC
Sbjct: 1   MAPNLHCYHSSPPFISLHSYPLVLRSHAPYPTSKHCSNSLKFLSIRCSANSNNQLTLRTC 60

Query: 61  RNCKAQFDPALNHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSED 120
           RNCK+QFDP+LNHPRACRFHTAHFGGETKRKFESVH GGTMDTP+ GKVFQYWHCCGSED
Sbjct: 61  RNCKSQFDPSLNHPRACRFHTAHFGGETKRKFESVHLGGTMDTPDSGKVFQYWHCCGSED 120

Query: 121 PFDPGCTASLHLSYDDD 138
           PFDPGCTAS H SYDDD
Sbjct: 121 PFDPGCTASPHSSYDDD 137

BLAST of Cla013152 vs. NCBI nr
Match: gi|703146957|ref|XP_010108931.1| (hypothetical protein L484_027126 [Morus notabilis])

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-43
Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 1

Query: 29  LNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPALNHPRACRFHTAHFGGET 88
           L P+ +      KFL +R SVD   + TLRTC+NCK QFDP+LNHPRACRFHTAHFGGET
Sbjct: 12  LRPSHQNPKPISKFLPLRCSVDPIKKATLRTCKNCKTQFDPSLNHPRACRFHTAHFGGET 71

Query: 89  KRKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLHLSYDD 137
           KRKFESVH+GGTMDTP+ G+VFQYWHCCGSEDPFDPGCTA+ H SYDD
Sbjct: 72  KRKFESVHTGGTMDTPDSGRVFQYWHCCGSEDPFDPGCTAAPHSSYDD 119

BLAST of Cla013152 vs. NCBI nr
Match: gi|567876157|ref|XP_006430668.1| (hypothetical protein CICLE_v10013088mg [Citrus clementina])

HSP 1 Score: 178.3 bits (451), Expect = 8.9e-42
Identity = 82/125 (65.60%), Postives = 94/125 (75.20%), Query Frame = 1

Query: 12  ARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPAL 71
           A F SLH          L P + +   SPK   I+ S  +NN  +LRTC+NCK Q+DP L
Sbjct: 11  ASFPSLHRISPTSSQTRLRPVT-IFKCSPKLTPIQCSASANNGSSLRTCKNCKTQYDPLL 70

Query: 72  NHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLH 131
           NHPRACRFHTAHFGGETKRKFESV++GGTMDTP+ G+VFQYWHCCGSEDPFDPGCTA+ H
Sbjct: 71  NHPRACRFHTAHFGGETKRKFESVYTGGTMDTPDSGEVFQYWHCCGSEDPFDPGCTAAPH 130

Query: 132 LSYDD 137
            SYDD
Sbjct: 131 SSYDD 134

BLAST of Cla013152 vs. NCBI nr
Match: gi|568857221|ref|XP_006482165.1| (PREDICTED: uncharacterized protein LOC102614560 [Citrus sinensis])

HSP 1 Score: 178.3 bits (451), Expect = 8.9e-42
Identity = 82/125 (65.60%), Postives = 94/125 (75.20%), Query Frame = 1

Query: 12  ARFLSLHTKVQVLRSDSLNPTSKLSSNSPKFLRIRSSVDSNNQLTLRTCRNCKAQFDPAL 71
           A F SLH          L P + +   SPK   I+ S  +NN  +LRTC+NCK Q+DP L
Sbjct: 11  ASFPSLHRISPTSSQTRLRPVT-IFKCSPKLTPIQCSASANNGSSLRTCKNCKTQYDPLL 70

Query: 72  NHPRACRFHTAHFGGETKRKFESVHSGGTMDTPNPGKVFQYWHCCGSEDPFDPGCTASLH 131
           NHPRACRFHTAHFGGETKRKFESV++GGTMDTP+ G+VFQYWHCCGSEDPFDPGCTA+ H
Sbjct: 71  NHPRACRFHTAHFGGETKRKFESVYTGGTMDTPDSGEVFQYWHCCGSEDPFDPGCTAAPH 130

Query: 132 LSYDD 137
            SYDD
Sbjct: 131 SSYDD 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L8V5_CUCSA1.4e-6586.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185090 PE=4 SV=1[more]
W9S912_9ROSA3.3e-4374.07Uncharacterized protein OS=Morus notabilis GN=L484_027126 PE=4 SV=1[more]
A0A067FIY9_CITSI6.2e-4265.60Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032756mg PE=4 SV=1[more]
V4S8S6_9ROSI6.2e-4265.60Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013088mg PE=4 SV=1[more]
A0A067JFQ2_JATCU8.1e-4274.77Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02509 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449445965|ref|XP_004140742.1|2.0e-6586.13PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus][more]
gi|659114539|ref|XP_008457102.1|7.3e-6081.02PREDICTED: uncharacterized protein LOC103496857 [Cucumis melo][more]
gi|703146957|ref|XP_010108931.1|4.7e-4374.07hypothetical protein L484_027126 [Morus notabilis][more]
gi|567876157|ref|XP_006430668.1|8.9e-4265.60hypothetical protein CICLE_v10013088mg [Citrus clementina][more]
gi|568857221|ref|XP_006482165.1|8.9e-4265.60PREDICTED: uncharacterized protein LOC102614560 [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU36003watermelon unigene v2 vs TrEMBLtranscribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013152Cla013152.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU36003WMU36003transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35106FAMILY NOT NAMEDcoord: 1..137
score: 2.8
NoneNo IPR availablePANTHERPTHR35106:SF2EXPRESSED PROTEINcoord: 1..137
score: 2.8