Cla97C11G210880 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C11G210880
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Transmembrane protein
Location	Cla97Chr11 : 4220213 .. 4221806 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTATTCTGATCTCCAGTTTCAGCATTGGAACCATGGGTGGAGGTGAACATGCACATGGGGAAGCCCATGGGGATTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATACCGCTATTGCCATGGCTGGCATCGTTCTAGTCTGCATCCCTATCGCTATGAAATCTGCAGAGCTTGAGGTTTCTCTTTGCCCATTTTGTCTATCTATTCCTTTTTTCTTTGGGCTATTCAAAAGGATGGATTTTTATATGTTTTTAATTGTCGTTTTGGTTGGGATGAATCATGGATTTATTCTATTCCCGCCCCCAATAGATAGACGAGATGGTGAAATTGAACTAGAATTTACATGGATTCCACCGTAACTAAAAAATGAAGGATCTAACTATAACTCTAGGGCATGGTTTGTTTAAGGCTGTTCTCTTATGTCGTAGGTTACTGATTTTGCTAGATAATCGTACAGTAATTTTTTACCGTTTGTTAAACGAACTATGGAATGCTTTAGAGTTTGACACACTTGTGGTCTGGTTGAGTTTAATCAGTAGCTTGCATCATATGATATTGGATTATTGTGGTGGAGTCAAAGACAATTATTGGTTTTGGGATGTATAAAGTTTTGCCAAAATTTCAAGATAAAATACAAATTTCAATATTAAAAAGTGAACACAGAAACTAGGGGAATCAGGTGTCCAACTCTAGTTACGATAGAAATTGTATTGAAGATTTTCAAAATTTTAAGAGGGGGAAATATAAAATTTTCACACTAAAGAGAGGACCTCAAGAAGTTGTAAATGGTCTCCAACGTATTGTCCATGCCTTCTTCTCTATTCCCAAGGGTTATTCCGTCATCAGTCTTCCCCTCCATAAATCATGAAAGTAGGACTAAACAGTAAATATATATACATATAGTGATGCTACAGGTGGTGGTGCTTCCACAACAAAAAATTCTTCTATATGTGGCAGTGGGGCTATCAGTTCAAAATAAAACGAGTTCTTTTTTACTTAACTGGAACCCCTTTCTTTAGATGAGGTGATTTGGTGGGCTTGTTTTTTTCTTCTCACCAGATTGGAATTAATTGATTTAATTTAAGATAGATTTTTCTTCTCACCAAAGCAATATGTCAATATATATAACTCAAATAAAAGAATTAGAATATAGGAGGTTAGATATTGCATGATATGTTAAACTATGGAAAAAACTAATGTGTTTATGTCCTACTTTTTTGGAAATTGGTGTGTCATCGTGTCCATGTCATGTCGTGTGTCTGTATCCATGTTTCTTATATTTAAACTAATGTACAATCCTTGGTTGGCAGACACATTTGCTATTATGAAATTCATACCTGTAGTGAAGCCGTAGGGGGAATTGAGAAGAAAGCTAATATTTGACATATTGTTACACCAAAAATTTAATTTTCTTCAGGTTTTGTACGAGAGATACAGAGAGAAACAATTACAATAAACCTCTCTTGCTTCATGCTTCCTCGTCTTTTGCTTTTGTTTTCCTTGGAGGGGTGTTCGATGGCCTTGGCCAAATCTTTGTTGGAGGTTTGCTTCATTTAA

mRNA sequence

ATGATTATTCTGATCTCCAGTTTCAGCATTGGAACCATGGGTGGAGGTGAACATGCACATGGGGAAGCCCATGGGGATTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATACCGCTATTGCCATGGCTGGCATCGTTCTAGTCTGCATCCCTATCGCTATGAAATCTGCAGAGCTTGAGGGGTGTTCGATGGCCTTGGCCAAATCTTTGTTGGAGGTTTGCTTCATTTAA

Coding sequence (CDS)

ATGATTATTCTGATCTCCAGTTTCAGCATTGGAACCATGGGTGGAGGTGAACATGCACATGGGGAAGCCCATGGGGATTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATACCGCTATTGCCATGGCTGGCATCGTTCTAGTCTGCATCCCTATCGCTATGAAATCTGCAGAGCTTGAGGGGTGTTCGATGGCCTTGGCCAAATCTTTGTTGGAGGTTTGCTTCATTTAA

Protein sequence

MIILISSFSIGTMGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELEGCSMALAKSLLEVCFI

Homology

[Close]

BLAST of Cla97C11G210880 vs. NCBI nr
Match: XP_004150067.1 (PREDICTED: uncharacterized protein LOC101205849 [Cucumis sativus] >KGN61825.1 hypothetical protein Csa_2G249800 [Cucumis sativus])

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 13 MGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVL+CIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Cla97C11G210880 vs. NCBI nr
Match: XP_008460976.1 (PREDICTED: uncharacterized protein LOC103499701 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 5.0e-26
Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 13 MGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHW+RNTAIAMAGIVL+CIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWRRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Cla97C11G210880 vs. NCBI nr
Match: XP_007220499.1 (uncharacterized protein LOC18785254 [Prunus persica] >XP_008232771.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_008232772.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_008232774.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_016649835.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_020414177.1 uncharacterized protein LOC18785254 [Prunus persica] >ONI22945.1 hypothetical protein PRUPE_2G159900 [Prunus persica] >ONI22946.1 hypothetical protein PRUPE_2G159900 [Prunus persica] >ONI22947.1 hypothetical protein PRUPE_2G159900 [Prunus persica])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 13 MGGGEHAHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGGEHAHG+ AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGI LVCIPIAMKSAELE
Sbjct: 1  MGGGEHAHGDGAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIFLVCIPIAMKSAELE 60

[Close]

BLAST of Cla97C11G210880 vs. NCBI nr
Match: XP_021817101.1 (uncharacterized protein LOC110759361 [Prunus avium] >XP_021817102.1 uncharacterized protein LOC110759361 [Prunus avium])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 13 MGGGEHAHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGGEHAHG+ AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGI LVCIPIAMKSAELE
Sbjct: 1  MGGGEHAHGDGAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIFLVCIPIAMKSAELE 60

[Close]

BLAST of Cla97C11G210880 vs. NCBI nr
Match: CBI40290.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 120.2 bits (300), Expect = 3.6e-24
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 13  MGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
           MGG EH HGEAHGDFR KVWSM+GGPYCRPKHWKRNTAIAMAG+ L+CIPIAMKSAELE
Sbjct: 103 MGGAEHGHGEAHGDFRTKVWSMTGGPYCRPKHWKRNTAIAMAGVFLICIPIAMKSAELE 161

[Close]

BLAST of Cla97C11G210880 vs. TrEMBL
Match: tr|A0A0A0LIT8|A0A0A0LIT8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249800 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 13 MGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVL+CIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Cla97C11G210880 vs. TrEMBL
Match: tr|A0A1S3CDP2|A0A1S3CDP2_CUCME (uncharacterized protein LOC103499701 OS=Cucumis melo OX=3656 GN=LOC103499701 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.3e-26
Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 13 MGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHW+RNTAIAMAGIVL+CIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWRRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Cla97C11G210880 vs. TrEMBL
Match: tr|M5XJK6|M5XJK6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G159900 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.1e-25
Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 0


Query: 13 MGGGEHAHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGGEHAHG+ AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGI LVCIPIAMKSAELE
Sbjct: 1  MGGGEHAHGDGAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIFLVCIPIAMKSAELE 60

[Close]

BLAST of Cla97C11G210880 vs. TrEMBL
Match: tr|A5BV96|A5BV96_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g03680 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-24
Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 13 MGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGG EH HGEAHGDFR KVWSM+GGPYCRPKHWKRNTAIAMAG+ L+CIPIAMKSAELE
Sbjct: 1  MGGAEHGHGEAHGDFRTKVWSMTGGPYCRPKHWKRNTAIAMAGVFLICIPIAMKSAELE 59

[Close]

BLAST of Cla97C11G210880 vs. TrEMBL
Match: tr|W9RXD8|W9RXD8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006549 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-23
Identity = 54/60 (90.00%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 13 MGGGEHAHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGG EH HGE AHGDFR+KVWSMSGGPYCRPKHWKRNTAIAMAGI L+CIPIAMKSAELE
Sbjct: 1  MGGAEHGHGEGAHGDFRSKVWSMSGGPYCRPKHWKRNTAIAMAGIFLICIPIAMKSAELE 60

[Close]

BLAST of Cla97C11G210880 vs. TAIR10
Match: AT4G00585.1 (unknown protein)

HSP 1 Score: 101.7 bits (252), Expect = 2.4e-22
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 13 MGGGEHAHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLVCIPIAMKSAELE 72
          MGGG+H HG   GDFRAKVWSM+GGP CRPKHW+RNTAIAM G+ LVCIPIA  SA+LE
Sbjct: 1  MGGGDHGHGAEGGDFRAKVWSMTGGPNCRPKHWRRNTAIAMFGVFLVCIPIAKLSAKLE 59

The following BLAST results are available for this feature:

BLAST of Cla97C11G210880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150067.1	2.2e-26	96.61	PREDICTED: uncharacterized protein LOC101205849 [Cucumis sativus] >KGN61825.1 hy...	[more]
XP_008460976.1	5.0e-26	94.92	PREDICTED: uncharacterized protein LOC103499701 [Cucumis melo]	[more]
XP_007220499.1	1.2e-24	95.00	uncharacterized protein LOC18785254 [Prunus persica] >XP_008232771.1 PREDICTED: ...	[more]
XP_021817101.1	1.2e-24	95.00	uncharacterized protein LOC110759361 [Prunus avium] >XP_021817102.1 uncharacteri...	[more]
CBI40290.3	3.6e-24	88.14	unnamed protein product, partial [Vitis vinifera]	[more]

BLAST of Cla97C11G210880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIT8\|A0A0A0LIT8_CUCSA	1.5e-26	96.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249800 PE=4 SV=1	[more]
tr\|A0A1S3CDP2\|A0A1S3CDP2_CUCME	3.3e-26	94.92	uncharacterized protein LOC103499701 OS=Cucumis melo OX=3656 GN=LOC103499701 PE=...	[more]
tr\|M5XJK6\|M5XJK6_PRUPE	8.1e-25	95.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G159900 PE=4 SV=1	[more]
tr\|A5BV96\|A5BV96_VITVI	2.4e-24	88.14	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g03680 PE=4 SV=...	[more]
tr\|W9RXD8\|W9RXD8_9ROSA	1.5e-23	90.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006549 PE=4 SV=1	[more]

BLAST of Cla97C11G210880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C11G210880 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00585.1	2.4e-22	76.27	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009853	photorespiration
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0045271	respiratory chain complex I
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G210880.1	Cla97C11G210880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34286:SF3	SUBFAMILY NOT NAMED	coord: 14..77
None	No IPR available	PANTHER	PTHR34286	FAMILY NOT NAMED	coord: 14..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C11G210880	Cla016585	Watermelon (97103) v1	wmwmbB361
Cla97C11G210880	Csa2G249800	Cucumber (Chinese Long) v2	cuwmbB110
Cla97C11G210880	MELO3C023322	Melon (DHL92) v3.5.1	mewmbB089
Cla97C11G210880	ClCG11G004150	Watermelon (Charleston Gray)	wcgwmbB065
Cla97C11G210880	CSPI02G12480	Wild cucumber (PI 183967)	cpiwmbB112
Cla97C11G210880	Cucsa.109380	Cucumber (Gy14) v1	cgywmbB150
Cla97C11G210880	Lsi10G003960	Bottle gourd (USVL1VR-Ls)	lsiwmbB043
Cla97C11G210880	CsGy2G012500	Cucumber (Gy14) v2	cgybwmbB105
Cla97C11G210880	MELO3C023322.2	Melon (DHL92) v3.6.1	medwmbB082
Cla97C11G210880	CsaV3_2G015020	Cucumber (Chinese Long) v3	cucwmbB115
Cla97C11G210880	Bhi10G001580	Wax gourd	wgowmbB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C11G210880	Silver-seed gourd	carwmbB0993
Cla97C11G210880	Cucumber (Gy14) v2	cgybwmbB492
Cla97C11G210880	Cucumber (Gy14) v1	cgywmbB584
Cla97C11G210880	Cucumber (Gy14) v1	cgywmbB646
Cla97C11G210880	Cucurbita maxima (Rimu)	cmawmbB457
Cla97C11G210880	Cucurbita maxima (Rimu)	cmawmbB567
Cla97C11G210880	Cucurbita maxima (Rimu)	cmawmbB613
Cla97C11G210880	Cucurbita moschata (Rifu)	cmowmbB438
Cla97C11G210880	Cucurbita moschata (Rifu)	cmowmbB544
Cla97C11G210880	Cucurbita moschata (Rifu)	cmowmbB587
Cla97C11G210880	Wild cucumber (PI 183967)	cpiwmbB199
Cla97C11G210880	Wild cucumber (PI 183967)	cpiwmbB543
Cla97C11G210880	Cucumber (Chinese Long) v3	cucwmbB196
Cla97C11G210880	Cucumber (Chinese Long) v3	cucwmbB539
Cla97C11G210880	Cucumber (Chinese Long) v2	cuwmbB519
Cla97C11G210880	Bottle gourd (USVL1VR-Ls)	lsiwmbB080
Cla97C11G210880	Melon (DHL92) v3.6.1	medwmbB162
Cla97C11G210880	Melon (DHL92) v3.5.1	mewmbB176
Cla97C11G210880	Watermelon (Charleston Gray)	wcgwmbB137
Cla97C11G210880	Watermelon (97103) v1	wmwmbB315
Cla97C11G210880	Wax gourd	wgowmbB240
Cla97C11G210880	Watermelon (97103) v2	wmbwmbB065
Cla97C11G210880	Silver-seed gourd	carwmbB0110
Cla97C11G210880	Silver-seed gourd	carwmbB0311
Cla97C11G210880	Silver-seed gourd	carwmbB0323