Bhi10G001580 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G001580
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Transmembrane protein
Location	chr10 : 49061605 .. 49061862 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGAGGTGAACATGTACATGGGGAAGCCCATGGGGACTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATACTGCCATTGCCATGGCCGGCATCGTTCTCATCTGCATCCCTATAGCTATGAAATCTGCAGAGCTTGAGGTTTCTCTTTGCCCATTTTTGTATACCTATTCCTTCTTATTTTTCTTTTACCATTTAAAGGATGGATTTTTATATTTTTAA

mRNA sequence

ATGGGAGGAGGTGAACATGTACATGGGGAAGCCCATGGGGACTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATACTGCCATTGCCATGGCCGGCATCGTTCTCATCTGCATCCCTATAGCTATGAAATCTGCAGAGCTTGAGGTTTCTCTTTGCCCATTTTTGTATACCTATTCCTTCTTATTTTTCTTTTACCATTTAAAGGATGGATTTTTATATTTTTAA

Coding sequence (CDS)

ATGGGAGGAGGTGAACATGTACATGGGGAAGCCCATGGGGACTTTAGGGCTAAGGTTTGGAGCATGAGCGGAGGACCTTATTGCCGGCCCAAGCATTGGAAACGCAATACTGCCATTGCCATGGCCGGCATCGTTCTCATCTGCATCCCTATAGCTATGAAATCTGCAGAGCTTGAGGTTTCTCTTTGCCCATTTTTGTATACCTATTCCTTCTTATTTTTCTTTTACCATTTAAAGGATGGATTTTTATATTTTTAA

Protein sequence

MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELEVSLCPFLYTYSFLFFFYHLKDGFLYF

Homology

[Close]

BLAST of Bhi10G001580 vs. TAIR10
Match: AT4G00585.1 (unknown protein)

HSP 1 Score: 100.1 bits (248), Expect = 6.8e-22
Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 1  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGG+H HG   GDFRAKVWSM+GGP CRPKHW+RNTAIAM G+ L+CIPIA  SA+LE
Sbjct: 1  MGGGDHGHGAEGGDFRAKVWSMTGGPNCRPKHWRRNTAIAMFGVFLVCIPIAKLSAKLE 59

[Close]

BLAST of Bhi10G001580 vs. TrEMBL
Match: tr|A0A0A0LIT8|A0A0A0LIT8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249800 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-26
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 1  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Bhi10G001580 vs. TrEMBL
Match: tr|A0A1S3CDP2|A0A1S3CDP2_CUCME (uncharacterized protein LOC103499701 OS=Cucumis melo OX=3656 GN=LOC103499701 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.5e-26
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 1  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHW+RNTAIAMAGIVLICIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWRRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Bhi10G001580 vs. TrEMBL
Match: tr|M5XJK6|M5XJK6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G159900 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-24
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MGGGEHVHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGGEH HG+ AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGI L+CIPIAMKSAELE
Sbjct: 1  MGGGEHAHGDGAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIFLVCIPIAMKSAELE 60

[Close]

BLAST of Bhi10G001580 vs. TrEMBL
Match: tr|A5BV96|A5BV96_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g03680 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-24
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 1  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGG EH HGEAHGDFR KVWSM+GGPYCRPKHWKRNTAIAMAG+ LICIPIAMKSAELE
Sbjct: 1  MGGAEHGHGEAHGDFRTKVWSMTGGPYCRPKHWKRNTAIAMAGVFLICIPIAMKSAELE 59

[Close]

BLAST of Bhi10G001580 vs. TrEMBL
Match: tr|W9R7W5|W9R7W5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016428 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-23
Identity = 57/68 (83.82%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MGGGEHVHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGG EH HGE AHGDFR+KVWSMSGGPYCRPKHWKRNTAIAMAGI LICIPIAMKSAELE
Sbjct: 1  MGGAEHGHGEGAHGDFRSKVWSMSGGPYCRPKHWKRNTAIAMAGIFLICIPIAMKSAELE 60

Query: 61 VSLCPFLY 68
          V    F +
Sbjct: 61 VIYAVFWF 68

[Close]

BLAST of Bhi10G001580 vs. NCBI nr
Match: XP_004150067.1 (PREDICTED: uncharacterized protein LOC101205849 [Cucumis sativus] >KGN61825.1 hypothetical protein Csa_2G249800 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 1  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Bhi10G001580 vs. NCBI nr
Match: XP_008460976.1 (PREDICTED: uncharacterized protein LOC103499701 [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-26
Identity = 57/59 (96.61%), Postives = 58/59 (98.31%), Query Frame = 0


Query: 1  MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGGEH HGEAHGDFRAKVWSMSGGPYCRPKHW+RNTAIAMAGIVLICIPIAMKSAELE
Sbjct: 1  MGGGEHGHGEAHGDFRAKVWSMSGGPYCRPKHWRRNTAIAMAGIVLICIPIAMKSAELE 59

[Close]

BLAST of Bhi10G001580 vs. NCBI nr
Match: XP_007220499.1 (uncharacterized protein LOC18785254 [Prunus persica] >XP_008232771.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_008232772.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_008232774.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_016649835.1 PREDICTED: uncharacterized protein LOC103331874 [Prunus mume] >XP_020414177.1 uncharacterized protein LOC18785254 [Prunus persica] >ONI22945.1 hypothetical protein PRUPE_2G159900 [Prunus persica] >ONI22946.1 hypothetical protein PRUPE_2G159900 [Prunus persica] >ONI22947.1 hypothetical protein PRUPE_2G159900 [Prunus persica])

HSP 1 Score: 119.8 bits (299), Expect = 4.6e-24
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MGGGEHVHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGGEH HG+ AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGI L+CIPIAMKSAELE
Sbjct: 1  MGGGEHAHGDGAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIFLVCIPIAMKSAELE 60

[Close]

BLAST of Bhi10G001580 vs. NCBI nr
Match: XP_021817101.1 (uncharacterized protein LOC110759361 [Prunus avium] >XP_021817102.1 uncharacterized protein LOC110759361 [Prunus avium])

HSP 1 Score: 119.8 bits (299), Expect = 4.6e-24
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MGGGEHVHGE-AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
          MGGGEH HG+ AHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGI L+CIPIAMKSAELE
Sbjct: 1  MGGGEHAHGDGAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIFLVCIPIAMKSAELE 60

[Close]

BLAST of Bhi10G001580 vs. NCBI nr
Match: CBI40290.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 119.4 bits (298), Expect = 5.9e-24
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 1   MGGGEHVHGEAHGDFRAKVWSMSGGPYCRPKHWKRNTAIAMAGIVLICIPIAMKSAELE 60
           MGG EH HGEAHGDFR KVWSM+GGPYCRPKHWKRNTAIAMAG+ LICIPIAMKSAELE
Sbjct: 103 MGGAEHGHGEAHGDFRTKVWSMTGGPYCRPKHWKRNTAIAMAGVFLICIPIAMKSAELE 161

The following BLAST results are available for this feature:

BLAST of Bhi10G001580 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00585.1	6.8e-22	74.58	unknown protein	[more]

BLAST of Bhi10G001580 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G001580 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIT8\|A0A0A0LIT8_CUCSA	2.5e-26	98.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249800 PE=4 SV=1	[more]
tr\|A0A1S3CDP2\|A0A1S3CDP2_CUCME	5.5e-26	96.61	uncharacterized protein LOC103499701 OS=Cucumis melo OX=3656 GN=LOC103499701 PE=...	[more]
tr\|M5XJK6\|M5XJK6_PRUPE	3.0e-24	91.67	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G159900 PE=4 SV=1	[more]
tr\|A5BV96\|A5BV96_VITVI	3.9e-24	89.83	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g03680 PE=4 SV=...	[more]
tr\|W9R7W5\|W9R7W5_9ROSA	1.5e-23	83.82	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016428 PE=4 SV=1	[more]

BLAST of Bhi10G001580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150067.1	3.7e-26	98.31	PREDICTED: uncharacterized protein LOC101205849 [Cucumis sativus] >KGN61825.1 hy...	[more]
XP_008460976.1	8.3e-26	96.61	PREDICTED: uncharacterized protein LOC103499701 [Cucumis melo]	[more]
XP_007220499.1	4.6e-24	91.67	uncharacterized protein LOC18785254 [Prunus persica] >XP_008232771.1 PREDICTED: ...	[more]
XP_021817101.1	4.6e-24	91.67	uncharacterized protein LOC110759361 [Prunus avium] >XP_021817102.1 uncharacteri...	[more]
CBI40290.3	5.9e-24	89.83	unnamed protein product, partial [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M001580	Bhi10M001580	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34286:SF3	SUBFAMILY NOT NAMED	coord: 2..72
None	No IPR available	PANTHER	PTHR34286	FAMILY NOT NAMED	coord: 2..72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi10G001580	Csa2G249800	Cucumber (Chinese Long) v2	cuwgoB182
Bhi10G001580	MELO3C023322	Melon (DHL92) v3.5.1	mewgoB130
Bhi10G001580	ClCG11G004150	Watermelon (Charleston Gray)	wcgwgoB167
Bhi10G001580	CSPI02G12480	Wild cucumber (PI 183967)	cpiwgoB181
Bhi10G001580	Cucsa.109380	Cucumber (Gy14) v1	cgywgoB173
Bhi10G001580	Lsi10G003960	Bottle gourd (USVL1VR-Ls)	lsiwgoB080
Bhi10G001580	CsGy2G012500	Cucumber (Gy14) v2	cgybwgoB175
Bhi10G001580	MELO3C023322.2	Melon (DHL92) v3.6.1	medwgoB133
Bhi10G001580	CsaV3_2G015020	Cucumber (Chinese Long) v3	cucwgoB187
Bhi10G001580	Cla016585	Watermelon (97103) v1	wgowmB406
Bhi10G001580	Cla97C11G210880	Watermelon (97103) v2	wgowmbB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G001580	Wax gourd	wgowgoB072
Bhi10G001580	Cucumber (Gy14) v1	cgywgoB754
Bhi10G001580	Cucumber (Gy14) v2	cgybwgoB653
Bhi10G001580	Cucurbita maxima (Rimu)	cmawgoB0684
Bhi10G001580	Cucurbita maxima (Rimu)	cmawgoB0745
Bhi10G001580	Cucurbita moschata (Rifu)	cmowgoB0679
Bhi10G001580	Cucurbita moschata (Rifu)	cmowgoB0736
Bhi10G001580	Cucurbita pepo (Zucchini)	cpewgoB0338
Bhi10G001580	Cucurbita pepo (Zucchini)	cpewgoB0363
Bhi10G001580	Cucurbita pepo (Zucchini)	cpewgoB0958
Bhi10G001580	Wild cucumber (PI 183967)	cpiwgoB693
Bhi10G001580	Cucumber (Chinese Long) v3	cucwgoB706
Bhi10G001580	Cucumber (Chinese Long) v2	cuwgoB681
Bhi10G001580	Bottle gourd (USVL1VR-Ls)	lsiwgoB128
Bhi10G001580	Melon (DHL92) v3.6.1	medwgoB232
Bhi10G001580	Melon (DHL92) v3.5.1	mewgoB231
Bhi10G001580	Watermelon (Charleston Gray)	wcgwgoB286
Bhi10G001580	Watermelon (97103) v2	wgowmbB356
Bhi10G001580	Watermelon (97103) v1	wgowmB383
Bhi10G001580	Silver-seed gourd	carwgoB0125
Bhi10G001580	Silver-seed gourd	carwgoB0389
Bhi10G001580	Silver-seed gourd	carwgoB0401