Cla97C11G206650 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C11G206650
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	survival of motor neuron-related-splicing factor 30
Location	Cla97Chr11 : 426719 .. 434959 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCTACCTACAAGGACCAGCTTCAGCAGGTACTCCTCTTCTCCATTTCTTTCTGGTTAATAATCCCTTCATTTTTTTATAATGATTTTGTTTCAGTTACTGGGGTTCTCTTTCTTCACATTTATTCAAAGCAAAATTGGATATTTATGATCTTGTAAACCTTTGCCGCTGTCATTCCTGAGTTCTTCCTAGTGGTTTGTATCTGAATTAGGGGTTTGCCCACCACCTTCGACTGCTCCGGTGCTAAGTTGCAGCGAATCCGGAGGAAATGAAACCTGTATTGGATAATTGCATCAAACCTAGAAATTTAGAACTCAATCCACATAAATCAGTATCAAGATTCTTTGGACTTTCCAGTTTCATGAGGGTTTATCTGTCCTGGTTCTTTATTATAACATTTTTTTTTTTTTTTTTTTTTACTTAGGATACTGAAAATCTTGACCAGGGTTTAAGCATCTGAATGATTTTTACATTTGTATGGTGAATTCTTAATTATCAGTCAGTCACTTCCTGCACCCAACTACATTAATTCTTGGCTTCCTTACTTTGTTTCATTTTGTATGTATGTTTGGGAAAATAACTTCTTTCTATCCTGATCCAGGTCAGACAGCTGTTAGATGATGACCCTAGCAACTCTGAATACATAGATATGGAAAAGGAGCTTGAAGAGGTAGTTTGTTTTTTTCCTCTTATTATGCCCATCCTTCCTTGTGAACTCGTCGCATGTGTATGCTTTAGCACTCTTCATATTCCCGCTGAATGTACTTTTAGGTTCAGTTTCTGCTGTGGCACTAAAGATCAGACAACGCTCAGAACTATTATTTTTATTATGTGTGTTTTCAGTCAAGTTTGCTTTCTTTCTTTTGTTTGTCTTCCTTTTTCCTTTTAAAGGAAACGTGTTGTTGAAATAAGAAAGAGTTATGGCCCCTGTGGAGGTTGTCATTTTCATTTTTGGGAGGAAAAGGTGAGGGGGTTGTATCTTTCATTTATGTGCTCCAGAGCTCTAATCTCTGGTCATAAATGATCATTATTGGATATGTGTGAAAATTTGAAACTTCATTAAGATGCACATCACTTCTACCTTGGTTCCCTTGCAGGTGTGCTAATTTTCGTGATGGCCAGTCTGCTCTTCCCCTGACCTCCTTTCAGATGCTGATCCTGAGATTTAAGTTCTTGTGTTTTTTTTTTCTTTTTTTCTTTTTGGGGACAATTACCTGCTCTTTATGAAATTTTACAGTTGAAGATATATTTTAACAGAAACATTGGACTTGGGCTAAAGTTGCAGTAATGCAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTGGAAACAGGTGATGACAGTGCATTAATTAGTTTCCAGCAGCCTAAAGAAAATGAGATGGTAAGTTCACATTTGTCCTCATTTTGCACATTGCATTTCTCTGCTGGAAGCAACATAATGTCATAGATGGTTATAGCTTTAGATTTAATGCACACTGTTTGGATCTCTGTGTGGTTCGTTGTGTATGTTGGTATTGTTTTTGTGTATGTGCTCACATGTGCAACTGCAAACACATTTGTGTCTGTGTTTTGAAGGCTTAATATCTTTGCCTTATTTGGAAGCATCCCTCGTAAATGGTTACTGGCATGTGGTTTTAATAATCTGAAACACATTGTCCTTGAACACAACACTCAAAACCCACTGAAGATTGAACTTGGAGAATGACTTCCATCAACCAGCCTTTGAATATTGACAATCAAAGAGAAGGAAGCTTTCTTTGGAGTGTTAGAGAGCAGTTGAGAGTTCCAAAAAATCATAACCCAAATAATGATGTTTACTTGACAAGGATATTTTGATTTCCATAGAGCTTTGTAAAGAAGTTTATCCATTGGTGTAGATGCCGACAAGTGCTTGTAAATGGATTTAACTGAAAACAAACGTAAAGACTCCAACTTCTTGAATTCGGGCGATCAAGAACTCTTCGGCCTTCAAAAGAACCCAGTGAAAATCCAAAGCTTCACTGATTCTTGCTGGGATGGCTTGCATTTTGCTTCTCCAAGTAACCTAGTTGCCCCATTCATATTTTTTAAAGATACAAATTTCATTAATGTATGAAATTTACAAAAGAGGGTGAAGCCCTAACCAAAGGAGTTACAAAAGATTTCTCCAATTGGTTAAAAGGGAAGTGCATTTACACCCAGACATAACAAGGAGAATAATATGATCGAATAATTGAAGGTGTCTTCCATATCTTGAAAAAGGAGGTTGCTGTGCTCCTTCCAAAGTTGTCCACAAAAGAATCGAATGAGATGCATCTGACGGATTCTTTTTCCCTTGATAAAAGGGTGGCCAAAGAGTAATTGAGCAAAATGTTGATATCACTACGAATAGTGAGGTTCCATTTGAAAGCTACAATCAATTACCTCTCCCTCTTCAAAATTCCCAGCAAAGTGGCCCATATGATAGACCAACTACTTGTCACACCCCCTCCCAGATTATCCTCTTTAACCTGGAAAAGGGTATGAAGACAGCAAATATCACCCATTTTGTGAGGTTCACTGCCACTTGTACCTATTTAACCTGTTGGAAACATCCTCATATATAGCCACCCACAAAGTCCTTTCCTCAAAGGTTATAAGTCTTAAACTGAGGAATGAGGGTCTCCTTGCAAAATGGATTTGGAGGTTCAGGGTGGAAAAGTCTGCTTTGTGGAGAAGGGACATTGCTTCCAAATTTGGCACTTATTTTTGTGGTAACAAAGCTGGAACCCGTTCTATGTCCCCTGCCGAAGGCCCACGGAAAGCCCTGGTGGATTAGCATGTGGCTGTTGCTCTTGGAAACGGTCGTTCTATCTCCTTTTGGTATGATTCTTTGGGTAAGCAATCGACCTTCAACTTATTTGCTCAGTCCTTTACCAAGGAAGCCTCAGTCTTTGAGTTATGGAACATGTTAAGGGTGGCTGGAACCTCCGACTTCGTAGGCCCTTAATGATTCAAAAATTGATGAATAGGCTCACCTCTCTCAATTGCTCACAAATCACCAACCCCATCAATCTGACGACTAGTGGTTTTGGAAGCCCGAATCATCTGGGCCTTTTCTATAAAATCCTGGATTGCTCTCAAGTACCAAAATAGCACTAATTTTTTTGCTGGCCCTTCTGAAGTTATTTGGTCCGACCAATACCCCAAAAAGATTAAATTCATTTCATTCATCAATGAAATTTTATCTTATAAAAAAAATATTTCCTAAATCTGATGACAAACGGGCGACGGATGAAAAAGTGTCTTTGAGATAGGGCCACCTTGTTGAAGGCCTCTTATGGCTAAAATCCTACCTTTAGGGCGGGCATTGATAATTATGGTGAAGTTTGTTGATGAAATGCACCCCTTTAGATATCTTCTCCATGTTGAACCAAATCCCATAGCATTGAGGACTAAATCAAGGAAATCTCAATCCACTTTGTCAAAAGTCTTTTCATTGTCAAGGTTAACCACAATGCCATTTCTTTTCTTTTTGTGCTATTTGTTGGCAATCAAATATGTATCAATAATTTGTCTTCCCTCCACAAATCCACCAATGCCAATTGAAAATTTGTGATGGGGTCTGAGGGAGGGACATTGTTGACCTTCTATGATAGAACTTCAGCAATGATCTTACAGAGATAAGAGATGAGACTAATATGACAAAAATCACCAACAATCCTATCATCCACTCTTTTTGGTATAGGCAAATGTTAGCTTCGTTGAGGCTAACATTGATGATTCCGGTTTTAGAAGAATCTTGGAACACACTCATTATATCATCTTTAAGAATGTTCCAATATTTTTTTATAGAACTCTGTTGTGTAGCCATCTTGACTAGGGGATTTACTAGTCCCGAGATCTTTTATTGTAGACTAAACCTTGGATTCCGTAAAGTTCAGTTCAAGATCATGAGACTGATTCTGAGTTATTGGATCCCAATTCAAGATTAATGGAAGGAAACAATGCCCACTGTGTTTAGTGTATAGTTTCTCGAATCTATTTCAGCGAGCAAACTGCAACCATTTTGAGATACAATTTCTTGAATGGTATTTTCTTTTGTCTGCATTCATCAACCTGATGAAAAAATTGGAGTTCATATCACCCTCGTAAGTTATCTATCCTTGCATTTTTTGCCTCCAATGAACACCATATTGTGGCTGTAAATCCCCCTTTTCTTCTGTGGCATCCAAAATGGCAAGGTCAAACATCAGCCTGATTGTTTAGTGTGTTAAACACTCAAAAGGGGTTCTGTTCCATTCCTTAACAACAGATTTAAGAACTTTCAACATCTGTATAAAAGAATGCGGATGCGCATGGGATTGTCTTTCCACCACTTTAGGATCAATGGTTTGAAAGGATGTTGTTCCATCCACATATTTTCTAAGCGGAAAGGGAGTAGATCTCATTTGTTGAACCCAACTGAAGCAAAATAGGGAAGTGATTAGAGGTGAGCCTACCAACCCATCAAATCGATGCATCTTTGAATTTGTCCAGAACAGTTTCTGTGAAGGCCCAATCATAGTATTAACTCATAGATTGACCCAAAAGCTCAAGCTGATGGACGAAGGAAAATTTAATATTATATGACAACACTACCTGTTACTTGTGGACTTGAAATATGTAGGAGACCCGGGAAGTGGAAATCAATATTAATTGGGGAGGAAATGGCATTGTAGGGGTAAACCTAAGACCTCCTGACCTCCTGCTCTGATGCAATATTAGATAACATGAGGTTCTATCTCAAAACCAATTAGCAATGAGAGGAGTAGCCCATGTATCTAGTAAAGATTCTAAAACCTTTCCAGTTTCCAACGAGGGATTCTCAATACACCCTTTTAAGATGGTGCCTCTTTTGGTTCACCATTCTTGGCTCGACCCAATGCCCCTTTGTTTTTGTTCTCAGCTAATTGGATAGCCATTTGTTATTTGTTTATTTTTATTTTGTCTATCGAGGATTCCTAATTCTCCTTTACCTCTCTGTACCTCTCTTTTTAAATTTTAAGACATACTACAAAAAGCAATTAGAATGGTTTGACATGGAAGCAGTACCACTCAAGAGACTTCATAAATTGCTTGGCAGTTGAATCAACCAGCTTCCTTTGATAATATTTTATTCCATTCATGTACATAATGCTTACATGGAAGCATGTATGTTTTAGTGATCTAATATTCTATGTTCTTGGTATGCAGGAAGCTGGAAGCATGTCTGATTATCATGAGAAATTTCCTGTTGGATCAAAAGTTCAAGCCGTTTGGAGTGAGGACGGGGAGTGGTGAGTGAAAAAATGGAGAAAATTTACAACCTTACTCAAACAGTATCTGTTCTGTAGGTTGTACAACTGTGCTCTTAGGTTCCAAAAAAGGAAATTTATTCTCCAACTTATTATCTTTTTTGTTAGAAAAGAGACATTGTTGAAGATTAATGGTGTTTGAAAGAGATTTGTGCAAGTTTACAAATTATTGGGGCATGTACCTGAGAATATTGAAAGGACTCAAGTGCCAAAATAAATAGTGTCCGTCTCCTATCTGTGAGCATGGAGGGGTTTTTTTCTCTCTCTTTCTTTCGTTCTTTTTTTTGGTTGGGGGGGGGGGGGGGGGGGATTCTGACTCTATTCACAAGAAACTGCAACATTGCCATAAACTTAGTTTTGCAAAATGGATTTTAATCAAAATCAGGTTATTGTTATACTATGACAGCAGCTAAGCTGCCCCAAAACTTTGTAAATTTATTTCATCAATTGCTTTTAAAGAGAAGCCTTAGCATCTTTGTAGAAAAGAAGGGAATGAAAAAACATGTTAAATTTAGAGTTTGTTTAAATCAATTTAATACCACCGTGACTATAATAGCCGTTCCCTTTGCGAAAATTATGAACCTCTAAACTCATCTTCATCTCTTCCCTCCAGTTTTCAGTTCATTGTGTGAGGAGAGTTGGTCCCTATTCAGGTTTAATTTGACCCTTTGACCTTCAATTGCTAAAGAGTTTTGTAACTTTTCGTTCGGTCTTACTTTTTAGACTAGAGCCCTTTTCTGTATAGCTAGTTTTTTGAGGTTCCCTTTCTCTGGCTATTTTTTGATGCCCCTCTTGTTCTTTCATGTTTCTTAATGTAACCATTTCCTATTGTAAAAAGTTTCTGTTCAGCTATCTTGTTTTGAGCCTTCGATGTAACATCTTCACCTGGTCTCTTATCAAAATGAATGATAAGTCTATGAGAATAGGACTTAGTCCGTTGAAGCTGATTTTAGTTTCTAGGTCTCCAAGCATATACTAATTTTGTTGATGGACGCATTTCTTACTTCTCTTAGCGTCAATGTTTTCTGCCACCTCTTTTGAAGCTTTCGTTCTTTTCCCCTTTTTGTTTAACTACTTTTTCTTGACTGTTTTTTTTAATAGAAACAAAACTTTTCCCTTGATTGTGTACAATTGTATGAATATTCAGGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTAAGGTTTCTACACCTGCAGTTTGCATGACTGTTTTCATTATTTTTAAGAGTTATCTTTTATCAGAAAAAAAGAGCACTCTAGTATTTCTTCAAAAAGATCTCGGTGTGTTTCTCTCTAAATCAACTAGAAATATGAGGAATTGGTTCATGGTTAGTAAATATGAGACATCTCACTTTGGATGGGTTCAATCCGTAGGAGTTAGGACTAAAAGCATATGTAAGAATTCTTGGAAGGCCATCTTCATTGGTTTGAGTTCCTTTGTTTGTTGGATTAGCTGGTCTAAGTATAAATACCATGTTTTCCTCTTTGTAAGACTTGATTGAACATTAATAAAATTCTTGCAATTTGGTTTACTCTAGTTTGCCTAGAATACTCGCAGGTATCTTGAACTCATTTTCTCTGAATTCTATGTTATTTATATTGGCCCTAATTATTACTAGGCCAATAACTAATAAGATATTGTTTCTTCTTGAAAAGAAAAAATATGTACATTATTGATTGATACAGGGGAGAGACAACTGCAAGTACAAGAAGGGCTCATGAGGGAGAGTTTAGGAGTTCGATCATGATATACATATTTCTGAAGTTTAGGAGTTTTATATAGATATACACGTACCTGTTAAATGGAGTATTAACCTTTTACCTAATTAGTCAGTTAGTAGTGCACCAATTGTCGACACTTATGATGTCTACTAATTTTAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGATATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCGCGAAATTTACCATCAAAGCTTCGAATTGAACCCGATGATCCTGAGGACGTAGTAAGTAGTAGATAATCTCATATTTAATGGCAACTAATTTAATCTAGTAATTAGTTTGGTATTTAAGAAAAAAATTTAGTAGTGCATTTGTTTTGTACCTGCGTGCTTGAAATTTGTGTGTATATATATATTTTATAATTGAGTACAACCCGCCTCCGAAAACTTGCTCTGATGTAGTAAATGTTTTGTATAGAAAGCCACCAAACGCAAGAAAATTCATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAACAAACGGCAGAATGCTTGGCAGCAATTTCAATCCGCAAAAGGCAAGTCTAAGAAGGTACGTATTATGAAATCTAGCATTTTGTGGAATATTAAGTGTGTTCATCGAATCCCAACAGTTATAAGGGAAAACCCTGAAACCAAAGGATGTTTTTGAAAAGTATTTCAATTGACATTAATCAAAACAGAATAATAATAGCTAGAAGGTTTTGAGCGGGGATACCAGGTTGTATTTGTATCTGACTATCTTCCAATCCTCATGATAACTTCCCTTGCTATTGCGTCCTCTTCAGCACCGTCTTATAATGATTTATAAATACAATTCTCAGATTGGTTTCTTCTCTGGGCGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGATCCGAATGGGAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGATTAA

mRNA sequence

ATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCTACCTACAAGGACCAGCTTCAGCAGGTCAGACAGCTGTTAGATGATGACCCTAGCAACTCTGAATACATAGATATGGAAAAGGAGCTTGAAGAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTGGAAACAGGTGATGACAGTGCATTAATTAGTTTCCAGCAGCCTAAAGAAAATGAGATGGAAGCTGGAAGCATGTCTGATTATCATGAGAAATTTCCTGTTGGATCAAAAGTTCAAGCCGTTTGGAGTGAGGACGGGGAGTGGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGATATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCGCGAAATTTACCATCAAAGCTTCGAATTGAACCCGATGATCCTGAGGACGTAAAAGCCACCAAACGCAAGAAAATTCATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAACAAACGGCAGAATGCTTGGCAGCAATTTCAATCCGCAAAAGGCAAGTCTAAGAAGATTGGTTTCTTCTCTGGGCGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGATCCGAATGGGAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGATTAA

Coding sequence (CDS)

ATGCAAGGAGGAGAAGATGTAAGCATTGAAGAGTTGGCTAATAATCTCTCTACCTACAAGGACCAGCTTCAGCAGGTCAGACAGCTGTTAGATGATGACCCTAGCAACTCTGAATACATAGATATGGAAAAGGAGCTTGAAGAGGTTATCGCTTTGACGGAAGAACTTCTTTCAACAGCAAAGCAAAATGAGATTTCTGGATCAAATGTGGAAACAGGTGATGACAGTGCATTAATTAGTTTCCAGCAGCCTAAAGAAAATGAGATGGAAGCTGGAAGCATGTCTGATTATCATGAGAAATTTCCTGTTGGATCAAAAGTTCAAGCCGTTTGGAGTGAGGACGGGGAGTGGTACGATGCTACAATTGAAGCCCACACTGTAAATGGTTTCTATGTTAGTTATGATGGTTGGGGAAACAAAGAAGAGGTGGACCCTGCAAATGTAAGAACAATCCAACTGGAAGTTAATGCTTTGCTTGAAGCAGAAAGAATGGCTGAAGCTACAAAGCAGGATATCAAACGCAAGATTGCTCAAGCTGCTTCTGTTGACTTCCAATCGCGAAATTTACCATCAAAGCTTCGAATTGAACCCGATGATCCTGAGGACGTAAAAGCCACCAAACGCAAGAAAATTCATGCTTTCAAGTCAAAGATGCGCATAGAACAGCTTGAAGTTACTCAAAACAAACGGCAGAATGCTTGGCAGCAATTTCAATCCGCAAAAGGCAAGTCTAAGAAGATTGGTTTCTTCTCTGGGCGGAAGAGGGAGAGCATTTTCAAGTCTCCGGACGATCCGAATGGGAAGGTTGGTGTGACTGGAAGTGGGAAGGGTTTGACTGAGTTTCAGAAGAGGGAAAAACACTTGCATCTCAAGGGTGCAACCGTGGAGATGGATGATTAA

Protein sequence

MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAKQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD

Homology

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BLAST of Cla97C11G206650 vs. NCBI nr
Match: XP_004142808.1 (PREDICTED: survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis sativus])

HSP 1 Score: 558.5 bits (1438), Expect = 1.3e-155
Identity = 286/299 (95.65%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELANNLSTYKDQL QVRQLLDDDP NSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDA 120
           KQNE+SGSNVETGDDSA I FQQ KENEMEAGSMSDYHEKFP+G+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEVSGSNVETGDDSASIGFQQSKENEMEAGSMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVN LLEAER+AEATKQ IKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNPLLEAERVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQ+A
Sbjct: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQTA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMD+
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDE 299

[Close]

BLAST of Cla97C11G206650 vs. NCBI nr
Match: XP_022933076.1 (survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022998367.1 survival of motor neuron-related-splicing factor 30 [Cucurbita maxima] >XP_023530530.1 survival of motor neuron-related-splicing factor 30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.7 bits (1423), Expect = 7.4e-154
Identity = 284/299 (94.98%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVS+EELA NLSTYKDQLQQVR+LLDDDP NSEYIDMEKELEEVIALTEELLSTA
Sbjct: 1   MQGGEDVSMEELATNLSTYKDQLQQVRELLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 61  KQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGDDSA ISFQQ K N+MEA SMSDYHEKFP+G+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDDSASISFQQTKGNKMEAESMSDYHEKFPIGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAA 180
           TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQ IKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLPS+LRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPSRLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 300
           KGKSKKIGFFSGRK+ESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGA+VEMDD
Sbjct: 241 KGKSKKIGFFSGRKKESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGASVEMDD 299

[Close]

BLAST of Cla97C11G206650 vs. NCBI nr
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia])

HSP 1 Score: 543.5 bits (1399), Expect = 4.5e-151
Identity = 281/299 (93.98%), Postives = 289/299 (96.66%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTA 60
           MQGGEDVSIEELA+NLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVI+LTEELL+TA
Sbjct: 1   MQGGEDVSIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATA 60

Query: 61  KQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDA 120
           KQNEISGSNVETGD+SA ISF Q KE +MEA S+SD+HEKFP+GSKVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSNVETGDNSASISFLQSKETKMEAESLSDHHEKFPIGSKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAA 180
           TIEAHTVNGFYVSYD WGNKEEVDPANVR IQ EVNALLEAERMAEATKQ IKRKIAQAA
Sbjct: 121 TIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSRNLP KLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA
Sbjct: 181 SVDFQSRNLPPKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 300
           KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD
Sbjct: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 299

[Close]

BLAST of Cla97C11G206650 vs. NCBI nr
Match: XP_008460593.1 (PREDICTED: survival of motor neuron-related-splicing factor 30 isoform X2 [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 249/257 (96.89%), Postives = 254/257 (98.83%), Query Frame = 0


Query: 43  EKELEEVIALTEELLSTAKQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFP 102
           +KELEEVIALTEELLSTAKQNE+SGSNVETGDDSA I FQQPKENEMEAGSMSDYHEKFP
Sbjct: 13  KKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFP 72

Query: 103 VGSKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 162
           +G+KVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE
Sbjct: 73  IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 132

Query: 163 RMAEATKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 222
           RMAEATKQ IKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ
Sbjct: 133 RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 192

Query: 223 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 282
           LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ
Sbjct: 193 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 252

Query: 283 KREKHLHLKGATVEMDD 300
           KREKHLHLKGATVEMD+
Sbjct: 253 KREKHLHLKGATVEMDE 269

[Close]

BLAST of Cla97C11G206650 vs. NCBI nr
Match: XP_008460591.1 (PREDICTED: survival of motor neuron-related-splicing factor 30 isoform X1 [Cucumis melo])

HSP 1 Score: 480.7 bits (1236), Expect = 3.6e-132
Identity = 244/252 (96.83%), Postives = 249/252 (98.81%), Query Frame = 0


Query: 48  EVIALTEELLSTAKQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKV 107
           +VIALTEELLSTAKQNE+SGSNVETGDDSA I FQQPKENEMEAGSMSDYHEKFP+G+KV
Sbjct: 23  QVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKV 82

Query: 108 QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 167
           QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA
Sbjct: 83  QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 142

Query: 168 TKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 227
           TKQ IKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ
Sbjct: 143 TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 202

Query: 228 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 287
           NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH
Sbjct: 203 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 262

Query: 288 LHLKGATVEMDD 300
           LHLKGATVEMD+
Sbjct: 263 LHLKGATVEMDE 274

[Close]

BLAST of Cla97C11G206650 vs. TrEMBL
Match: tr|A0A1S3CE07|A0A1S3CE07_CUCME (survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-134
Identity = 249/257 (96.89%), Postives = 254/257 (98.83%), Query Frame = 0


Query: 43  EKELEEVIALTEELLSTAKQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFP 102
           +KELEEVIALTEELLSTAKQNE+SGSNVETGDDSA I FQQPKENEMEAGSMSDYHEKFP
Sbjct: 13  KKELEEVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFP 72

Query: 103 VGSKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 162
           +G+KVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE
Sbjct: 73  IGTKVQAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAE 132

Query: 163 RMAEATKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 222
           RMAEATKQ IKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ
Sbjct: 133 RMAEATKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQ 192

Query: 223 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 282
           LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ
Sbjct: 193 LEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQ 252

Query: 283 KREKHLHLKGATVEMDD 300
           KREKHLHLKGATVEMD+
Sbjct: 253 KREKHLHLKGATVEMDE 269

[Close]

BLAST of Cla97C11G206650 vs. TrEMBL
Match: tr|A0A1S3CD96|A0A1S3CD96_CUCME (survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499374 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.4e-132
Identity = 244/252 (96.83%), Postives = 249/252 (98.81%), Query Frame = 0


Query: 48  EVIALTEELLSTAKQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKV 107
           +VIALTEELLSTAKQNE+SGSNVETGDDSA I FQQPKENEMEAGSMSDYHEKFP+G+KV
Sbjct: 23  QVIALTEELLSTAKQNEVSGSNVETGDDSASIGFQQPKENEMEAGSMSDYHEKFPIGTKV 82

Query: 108 QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 167
           QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA
Sbjct: 83  QAVWSEDGEWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEA 142

Query: 168 TKQDIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 227
           TKQ IKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ
Sbjct: 143 TKQAIKRKIAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQ 202

Query: 228 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 287
           NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH
Sbjct: 203 NKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKH 262

Query: 288 LHLKGATVEMDD 300
           LHLKGATVEMD+
Sbjct: 263 LHLKGATVEMDE 274

[Close]

BLAST of Cla97C11G206650 vs. TrEMBL
Match: tr|M5XFY1|M5XFY1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G585700 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.7e-125
Identity = 237/299 (79.26%), Postives = 268/299 (89.63%), Query Frame = 0


Query: 2   QGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAK 61
           +GGE++SIEELA+NLSTYKDQL QV++LL DDP NSEY DME+EL EVIALTEELL+TAK
Sbjct: 4   EGGEELSIEELASNLSTYKDQLHQVKELLADDPVNSEYADMERELNEVIALTEELLATAK 63

Query: 62  QNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDAT 121
           QN+ SG +  T  DSA  S  Q + NE ++GS+SDYH+KFP G+KVQAVWSEDGEWYDAT
Sbjct: 64  QNQSSGIDFGT-SDSASPSLPQTQRNENDSGSISDYHDKFPPGTKVQAVWSEDGEWYDAT 123

Query: 122 IEAHTVNGFYVSYDGWGNKEEVDPANVRTIQL-EVNALLEAERMAEATKQDIKRKIAQAA 181
           IE+ T NG++V+Y+GWGN+EEVDPANVR IQ   VNALLEAER+AEATKQ IKRKIAQAA
Sbjct: 124 IESLTPNGYFVTYEGWGNREEVDPANVRPIQEGAVNALLEAERVAEATKQAIKRKIAQAA 183

Query: 182 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 241
           S+DFQSR+LP+KLRIEPDDPEDVKATKRKKIH+FKSKMR+EQLEVTQNKRQNAWQQFQ+ 
Sbjct: 184 SIDFQSRSLPAKLRIEPDDPEDVKATKRKKIHSFKSKMRMEQLEVTQNKRQNAWQQFQTT 243

Query: 242 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 300
           KGK+KKIGFFSGRKRESIFKSPDDP GKVGVTGSGKGLT+FQKREKHLHLKG T E DD
Sbjct: 244 KGKTKKIGFFSGRKRESIFKSPDDPFGKVGVTGSGKGLTDFQKREKHLHLKGGTAENDD 301

[Close]

BLAST of Cla97C11G206650 vs. TrEMBL
Match: tr|A0A1S2Y4W4|A0A1S2Y4W4_CICAR (survival of motor neuron-related-splicing factor 30 OS=Cicer arietinum OX=3827 GN=LOC101495555 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 8.1e-125
Identity = 237/300 (79.00%), Postives = 264/300 (88.00%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTA 60
           MQGG++V+IEELA+NLS YKDQLQQVRQLL+D+PSNSEY+DME+EL EVIALTEELL+TA
Sbjct: 1   MQGGDEVNIEELASNLSIYKDQLQQVRQLLNDEPSNSEYVDMERELCEVIALTEELLATA 60

Query: 61  KQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDA 120
           KQNE+SG++   G         +PKEN  E     D+ EKFPVG+KVQAVWS+DGEWYDA
Sbjct: 61  KQNEVSGASASPG-------LSRPKENNEELDGPYDHQEKFPVGTKVQAVWSDDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQL-EVNALLEAERMAEATKQDIKRKIAQA 180
           TIEA+T NG+YVSY+ WGNKEEVDPANVR IQ   V+AL+EAER+AEATKQ IKRKIAQA
Sbjct: 121 TIEAYTPNGYYVSYESWGNKEEVDPANVRPIQEGTVDALVEAERVAEATKQAIKRKIAQA 180

Query: 181 ASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS 240
           ASVDFQSR LP+KLRIEPDDPEDVKATKRKKIHAFKSKMR+EQLEVTQNKRQNAWQQFQS
Sbjct: 181 ASVDFQSRTLPAKLRIEPDDPEDVKATKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQS 240

Query: 241 AKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 300
            KGK+KKIGFFSGRKRESIFKSPDDP GKVGVTGSGKGLTEFQKREKH HLK  ++E DD
Sbjct: 241 TKGKTKKIGFFSGRKRESIFKSPDDPQGKVGVTGSGKGLTEFQKREKHFHLKDGSIEGDD 293

[Close]

BLAST of Cla97C11G206650 vs. TrEMBL
Match: tr|A0A061G881|A0A061G881_THECC (Nucleic acid binding,RNA binding isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_027140 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 5.8e-123
Identity = 234/299 (78.26%), Postives = 260/299 (86.96%), Query Frame = 0


Query: 1   MQGGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTA 60
           MQG +++SIEELA+NLSTYK+QLQQVRQ+L DDP N EY+DMEKEL EVIALTEELL+TA
Sbjct: 1   MQGEDELSIEELASNLSTYKEQLQQVRQILVDDPGNLEYVDMEKELAEVIALTEELLATA 60

Query: 61  KQNEISGSNVETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDA 120
           KQNEISGS++ T       S+  P     EAG  SDY +KFPVG+KVQAVWSEDGEWYDA
Sbjct: 61  KQNEISGSDIGT-------SYSAPPAQSKEAGKTSDYGDKFPVGTKVQAVWSEDGEWYDA 120

Query: 121 TIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAA 180
           T+EA T NG++V YDGWGNKEEVDPANVR I  E NALLEAE++AEATKQ IKRKIAQAA
Sbjct: 121 TVEAITPNGYFVLYDGWGNKEEVDPANVRAI--EYNALLEAEKVAEATKQAIKRKIAQAA 180

Query: 181 SVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQSA 240
           SVDFQSR+LP+KLRI  DDPEDVKA KRKKIHAFKSKMR EQLEV QNKRQNAWQQFQ+ 
Sbjct: 181 SVDFQSRSLPAKLRITADDPEDVKAAKRKKIHAFKSKMRFEQLEVAQNKRQNAWQQFQTT 240

Query: 241 KGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATVEMDD 300
           KGK+KK+GFFSGRKRESIFKSPDDP+GKVGVTGSGKGLTEFQKREKHLHLKG  VE++D
Sbjct: 241 KGKTKKVGFFSGRKRESIFKSPDDPHGKVGVTGSGKGLTEFQKREKHLHLKGGNVEIND 290

[Close]

BLAST of Cla97C11G206650 vs. Swiss-Prot
Match: sp|Q6DEY1|SPF30_XENTR (Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=8364 GN=smndc1 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 92/285 (32.28%), Postives = 137/285 (48.07%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L+ YK QLQQV   L  +  N + + ++K+L+EVI LT++LLS+          
Sbjct: 3   EDLAKQLAGYKAQLQQVESALTANGENEDLLKLKKDLQEVIELTKDLLSSQPS------- 62

Query: 70  VETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDATI-EAHTVN 129
            ET DD+         ++   +GS S     + VG K  AVWS+DG+WY+A I E    N
Sbjct: 63  -ETADDAC--------DDMSASGSQS-----WKVGEKCMAVWSDDGQWYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N+R ++       E  +  E                   S 
Sbjct: 123 GTAAITFAGYGNAEVTSLLNLRPVE-------EGRKAKE------------------DSG 182

Query: 190 NLPSKLRIEPDDPEDVKATKR-KKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSK 249
           NLP   +      E + A +  KK  A K   RI++LE  +  ++  WQQF + A  K+K
Sbjct: 183 NLPMSKK------EMIAAQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNKAYSKNK 230

Query: 250 KIGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
           K     G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 K-----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cla97C11G206650 vs. Swiss-Prot
Match: sp|Q3T045|SPF30_BOVIN (Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.6e-12
Identity = 77/284 (27.11%), Postives = 121/284 (42.61%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDATI-EAHTVN 129
                     +  QP  +             + VG K  A+WSEDG+ Y+A I E    N
Sbjct: 63  --------NFASTQPTHS-------------WKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N++ ++                K+D   K      +  Q R
Sbjct: 123 GTAAITFAGYGNAEVTPLLNLKPVE-----------EGRKAKEDSGNKPMSKKEMIAQQR 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                              +R+                    ++  WQQF + A  K+KK
Sbjct: 183 EYXXXXXXXXXXXXXXXXXERE-------------------DQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cla97C11G206650 vs. Swiss-Prot
Match: sp|O75940|SPF30_HUMAN (Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=SMNDC1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.6e-12
Identity = 78/284 (27.46%), Postives = 120/284 (42.25%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDATI-EAHTVN 129
                     SF   +               + VG K  AVWSEDG+ Y+A I E    N
Sbjct: 63  ----------SFASTQPT-----------HSWKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N++ ++                K+D   K      +  Q R
Sbjct: 123 GTAAITFAGYGNAEVTPLLNLKPVE-----------EGRKAKEDSGNKPMSKKEMIAQQR 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                              +R+                    ++  WQQF + A  K+KK
Sbjct: 183 EYXXXXXXXXXXXXXXXXXERE-------------------DQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cla97C11G206650 vs. Swiss-Prot
Match: sp|Q5R591|SPF30_PONAB (Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=SMNDC1 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-11
Identity = 77/284 (27.11%), Postives = 120/284 (42.25%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDATI-EAHTVN 129
                     SF   +               + VG K  A+WSEDG+ Y+A I E    N
Sbjct: 63  ----------SFASTQPT-----------HSWKVGDKCMAIWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAASVDFQSR 189
           G   +++ G+GN E     N++ ++                K+D   K      +  Q R
Sbjct: 123 GTAAITFAGYGNAEVTPLLNLKPVE-----------EGRKAKEDSGNKPMSKKEMIAQQR 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                              +R+                    ++  WQQF + A  K+KK
Sbjct: 183 EYXXXXXXXXXXXXXXXXXERE-------------------DQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cla97C11G206650 vs. Swiss-Prot
Match: sp|Q8BGT7|SPF30_MOUSE (Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=Smndc1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 77/284 (27.11%), Postives = 119/284 (41.90%), Query Frame = 0


Query: 10  EELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAKQNEISGSN 69
           E+LA  L++YK QLQQV   L  +  N + + ++K+L+EVI LT++LLST     ++ S+
Sbjct: 3   EDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLASSD 62

Query: 70  VETGDDSALISFQQPKENEMEAGSMSDYHEKFPVGSKVQAVWSEDGEWYDATI-EAHTVN 129
                     SF   +               + VG K  AVWSEDG+ Y+A I E    N
Sbjct: 63  ----------SFASTQPT-----------HSWKVGDKCMAVWSEDGQCYEAEIEEIDEEN 122

Query: 130 G-FYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRKIAQAASVDFQSR 189
           G   +++  +GN E     N++ ++                K+D   K      +  Q R
Sbjct: 123 GTAAITFAVYGNAEVTPLLNLKPVE-----------EGRKAKEDSGNKPMSKKEMIAQQR 182

Query: 190 NLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQQFQS-AKGKSKK 249
                              +R+                    ++  WQQF + A  K+KK
Sbjct: 183 EYXXXXXXXXXXXXXXXXXERE-------------------DQKVKWQQFNNRAYSKNKK 230

Query: 250 IGFFSGRKRESIFKSPDDPNGKVGVTGSG---KGLTEFQKREKH 288
                G+ + SIF SP+   GKVGV   G   K +T++Q   K+
Sbjct: 243 -----GQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKY 230

[Close]

BLAST of Cla97C11G206650 vs. TAIR10
Match: AT2G02570.1 (nucleic acid binding;RNA binding)

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-105
Identity = 202/304 (66.45%), Postives = 247/304 (81.25%), Query Frame = 0


Query: 3   GGEDVSIEELANNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVIALTEELLSTAKQ 62
           G E++SIE+LA+++STYK+QL+QVRQLL +DP NSEY DMEKEL+EVIALTEE+L+TAKQ
Sbjct: 4   GVEELSIEQLASSISTYKEQLEQVRQLLSEDPRNSEYADMEKELKEVIALTEEVLATAKQ 63

Query: 63  NEISGSNVETGDDSALISFQQPKENEME-----AGSMSD-YHE-KFPVGSKVQAVWSEDG 122
           NEIS S      D+ + +   P   ++E      G  +D  HE KFPVG+KVQAV+S+DG
Sbjct: 64  NEISLS------DAGVSAEATPGSPDLEGAWEKTGLRNDPIHEGKFPVGTKVQAVFSDDG 123

Query: 123 EWYDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLEVNALLEAERMAEATKQDIKRK 182
           EWYDATIEAHT NG++V+YD WGNKEEVDP NVR I  E NA++EAER+A+ATK  +KRK
Sbjct: 124 EWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRPI--EQNAIVEAERLAQATKNALKRK 183

Query: 183 IAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQ 242
           I +AAS D+Q++ LP+KL+I+P+DPEDVK  KRKKIHAFKSK R EQLEV QNK+QN WQ
Sbjct: 184 IEKAASSDYQTKTLPAKLKIDPNDPEDVKIAKRKKIHAFKSKARFEQLEVVQNKKQNDWQ 243

Query: 243 QFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATV 300
           QFQ+ K K+KK+GFF+GRK+ESIFKSP+DP GKVGVTGSGKGLT+FQKREKHLHLK    
Sbjct: 244 QFQTTKAKTKKVGFFTGRKKESIFKSPEDPFGKVGVTGSGKGLTDFQKREKHLHLKSGNA 299

The following BLAST results are available for this feature:

BLAST of Cla97C11G206650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142808.1	1.3e-155	95.65	PREDICTED: survival of motor neuron-related-splicing factor 30 isoform X1 [Cucum...	[more]
XP_022933076.1	7.4e-154	94.98	survival of motor neuron-related-splicing factor 30 [Cucurbita moschata] >XP_022...	[more]
XP_022155149.1	4.5e-151	93.98	survival of motor neuron-related-splicing factor 30 [Momordica charantia]	[more]
XP_008460593.1	1.7e-134	96.89	PREDICTED: survival of motor neuron-related-splicing factor 30 isoform X2 [Cucum...	[more]
XP_008460591.1	3.6e-132	96.83	PREDICTED: survival of motor neuron-related-splicing factor 30 isoform X1 [Cucum...	[more]

BLAST of Cla97C11G206650 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CE07\|A0A1S3CE07_CUCME	1.1e-134	96.89	survival of motor neuron-related-splicing factor 30 isoform X2 OS=Cucumis melo O...	[more]
tr\|A0A1S3CD96\|A0A1S3CD96_CUCME	2.4e-132	96.83	survival of motor neuron-related-splicing factor 30 isoform X1 OS=Cucumis melo O...	[more]
tr\|M5XFY1\|M5XFY1_PRUPE	3.7e-125	79.26	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G585700 PE=4 SV=1	[more]
tr\|A0A1S2Y4W4\|A0A1S2Y4W4_CICAR	8.1e-125	79.00	survival of motor neuron-related-splicing factor 30 OS=Cicer arietinum OX=3827 G...	[more]
tr\|A0A061G881\|A0A061G881_THECC	5.8e-123	78.26	Nucleic acid binding,RNA binding isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_027...	[more]

BLAST of Cla97C11G206650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6DEY1\|SPF30_XENTR	1.1e-18	32.28	Survival of motor neuron-related-splicing factor 30 OS=Xenopus tropicalis OX=836...	[more]
sp\|Q3T045\|SPF30_BOVIN	9.6e-12	27.11	Survival of motor neuron-related-splicing factor 30 OS=Bos taurus OX=9913 GN=SMN...	[more]
sp\|O75940\|SPF30_HUMAN	9.6e-12	27.46	Survival of motor neuron-related-splicing factor 30 OS=Homo sapiens OX=9606 GN=S...	[more]
sp\|Q5R591\|SPF30_PONAB	1.3e-11	27.11	Survival of motor neuron-related-splicing factor 30 OS=Pongo abelii OX=9601 GN=S...	[more]
sp\|Q8BGT7\|SPF30_MOUSE	1.1e-10	27.11	Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=...	[more]

BLAST of Cla97C11G206650 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02570.1	3.5e-105	66.45	nucleic acid binding;RNA binding	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0005737	cytoplasm

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR010304	Survival_motor_neuron
IPR002999	Tudor

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G206650.1	Cla97C11G206650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	COILS	Coil	Coil	coord: 43..63
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	GENE3D	G3DSA:2.30.30.140		coord: 96..152 e-value: 3.7E-11 score: 44.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..276
None	No IPR available	PANTHER	PTHR45272	FAMILY NOT NAMED	coord: 1..299
None	No IPR available	CDD	cd04508	TUDOR	coord: 104..149 e-value: 1.8648E-10 score: 54.5263
None	No IPR available	SUPERFAMILY	SSF63748	Tudor/PWWP/MBT	coord: 100..151
IPR002999	Tudor domain	SMART	SM00333	TUDOR_7	coord: 99..156 e-value: 6.0E-12 score: 55.7
IPR002999	Tudor domain	PROSITE	PS50304	TUDOR	coord: 100..158 score: 13.666
IPR010304	Survival motor neuron	PFAM	PF06003	SMN	coord: 80..157 e-value: 3.8E-7 score: 29.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C11G206650	Cla001905	Watermelon (97103) v1	wmwmbB361
Cla97C11G206650	Csa5G526860	Cucumber (Chinese Long) v2	cuwmbB364
Cla97C11G206650	MELO3C022928	Melon (DHL92) v3.5.1	mewmbB052
Cla97C11G206650	ClCG11G000310	Watermelon (Charleston Gray)	wcgwmbB065
Cla97C11G206650	CSPI05G18530	Wild cucumber (PI 183967)	cpiwmbB380
Cla97C11G206650	Cucsa.011580	Cucumber (Gy14) v1	cgywmbB346
Cla97C11G206650	CmoCh04G020000	Cucurbita moschata (Rifu)	cmowmbB712
Cla97C11G206650	Lsi11G000990	Bottle gourd (USVL1VR-Ls)	lsiwmbB076
Cla97C11G206650	CsGy5G018180	Cucumber (Gy14) v2	cgybwmbB345
Cla97C11G206650	CsaV3_5G027420	Cucumber (Chinese Long) v3	cucwmbB379
Cla97C11G206650	BhiUN159G28	Wax gourd	wgowmbB341

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C11G206650	Cucumber (Gy14) v2	cgybwmbB348
Cla97C11G206650	Cucurbita maxima (Rimu)	cmawmbB726
Cla97C11G206650	Cucurbita maxima (Rimu)	cmawmbB734
Cla97C11G206650	Cucurbita moschata (Rifu)	cmowmbB699
Cla97C11G206650	Cucurbita moschata (Rifu)	cmowmbB706
Cla97C11G206650	Wild cucumber (PI 183967)	cpiwmbB383
Cla97C11G206650	Cucumber (Chinese Long) v2	cuwmbB360
Cla97C11G206650	Bottle gourd (USVL1VR-Ls)	lsiwmbB079
Cla97C11G206650	Melon (DHL92) v3.6.1	medwmbB045
Cla97C11G206650	Melon (DHL92) v3.6.1	medwmbB046
Cla97C11G206650	Melon (DHL92) v3.5.1	mewmbB050
Cla97C11G206650	Watermelon (Charleston Gray)	wcgwmbB066
Cla97C11G206650	Watermelon (97103) v1	wmwmbB366
Cla97C11G206650	Wax gourd	wgowmbB342
Cla97C11G206650	Wax gourd	wgowmbB524