Cla97C10G184660 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C10G184660
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ring finger protein
Location	Cla97Chr10 : 188831 .. 189376 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCGCTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA

mRNA sequence

ATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCGCTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA

Coding sequence (CDS)

ATGACTCGCTATATCAGAGCTCTCGCCGCGAATACTTCGTCGGCACCGCCGCCGGAGGCGGTGGCTTTGGAGTCGGACTTCGTGGTGATTCTGGCAGCGCTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGCCGTGGGGGTGGAAGTGTTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATCCTGCAGTCGCTTCCGAAATTCAGGTACAAGTCGACCGGGGGAGAGGGGAAAATTGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCATGGAGGGGGAGGAGATCCGGCAGCTGCCACAGTGCGGACATTGCTTCCACGTCAGCTGTGTAGACACGTGGCTGGGGTCCCACTCCTCATGTCCTTCTTGCCGTCAGATTCTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCCGTCGTGCAAGGCGGCGCTGCTCACAACAACGAAGAAGAGGAGGAAGTGGAAGATAACAACAGGGGTTTGGGATTTTTGCCTTGA

Protein sequence

MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEEVEDNNRGLGFLP

Homology

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BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_008449155.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 7.1e-75
Identity = 169/183 (92.35%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV--XXXXXXXXXXXXXXXXXXRGLG 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV  XXXXXXXXXXXXXXXXXXRGLG
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVXXXXXXXXXXXXXXXXXXXXRGLG 178

Query: 181 FLP 182
           FLP
Sbjct: 181 FLP 178

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BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_004146217.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis sativus] >KGN55591.1 hypothetical protein Csa_3G000150 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 143/156 (91.67%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV 157
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA V
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPADV 151

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_022933605.1 (RING-H2 finger protein ATL8 [Cucurbita moschata])

HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64
Identity = 156/194 (80.41%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MTRYIRALAANTS------SAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY +ALA NTS               +ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 1   MTRYFQALAGNTSXXXXXXXXXXXXXXXMESDFVVILAALLCALICMVGLIAVARCAWLR 60

Query: 61  RG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEGKIAAECAICLAEFMEGEEIR 120
           RG  GG  GNQASANRGLKKKILQSLPKF Y++  +GGE K AAECAICLAEF++GEEIR
Sbjct: 61  RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIR 120

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV---XXXXXXXXXXX 180
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV   XXXXXXXXXXX
Sbjct: 121 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGXXXXXXXXXXXX 180

Query: 181 XXXXXXXRGLGFLP 182
           XXXXXXXRGLGFLP
Sbjct: 181 XXXXXXXRGLGFLP 194

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_022971423.1 (RING-H2 finger protein ATL8 [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64
Identity = 156/194 (80.41%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 1   MTRYIRALAANT------SSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY++ALA NT                 ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYLQALAGNTXXXXXXXXXXXXXXXXXESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  RG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEGKIAAECAICLAEFMEGEEIR 120
           RG  GG  GNQASANRGLKKKILQSLPKF Y++  +GGEGK AAECAICLAEF++GEEIR
Sbjct: 101 RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV---XXXXXXXXXXX 180
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVV   XXXXXXXXXXX
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGDFPAVVHGXXXXXXXXXXXX 220

Query: 181 XXXXXXXRGLGFLP 182
           XXXXXXXRGLGFLP
Sbjct: 221 XXXXXXXRGLGFLP 234

[Close]

BLAST of Cla97C10G184660 vs. NCBI nr
Match: XP_023539225.1 (RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 9.6e-64
Identity = 155/194 (79.90%), Postives = 162/194 (83.51%), Query Frame = 0


Query: 1   MTRYIRALAANT------SSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY +ALA NT                 ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYFQALAGNTXXXXXXXXXXXXXXXXXESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  RG--GGSVGNQASANRGLKKKILQSLPKFRYKS--TGGEGKIAAECAICLAEFMEGEEIR 120
           RG   G  GNQASANRGLKKKILQSLPKF Y++  +GGEGK AAECAICLAEF++GEEIR
Sbjct: 101 RGSNSGGAGNQASANRGLKKKILQSLPKFTYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV---XXXXXXXXXXX 180
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV   XXXXXXXXXXX
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHXXXXXXXXXXXXX 220

Query: 181 XXXXXXXRGLGFLP 182
           XXXXXXXRGLGFLP
Sbjct: 221 XXXXXXXRGLGFLP 234

[Close]

BLAST of Cla97C10G184660 vs. TrEMBL
Match: tr|A0A1S3BKT0|A0A1S3BKT0_CUCME (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.7e-75
Identity = 169/183 (92.35%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV--XXXXXXXXXXXXXXXXXXRGLG 180
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV  XXXXXXXXXXXXXXXXXXRGLG
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVXXXXXXXXXXXXXXXXXXXXRGLG 178

Query: 181 FLP 182
           FLP
Sbjct: 181 FLP 178

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BLAST of Cla97C10G184660 vs. TrEMBL
Match: tr|A0A0A0L622|A0A0A0L622_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-73
Identity = 143/156 (91.67%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSV 60
           M+ YIRAL ANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKFRYKST G+GKIAAECAICLAEF+EGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV 157
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA V
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPADV 151

[Close]

BLAST of Cla97C10G184660 vs. TrEMBL
Match: tr|K4BAB2|K4BAB2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.2e-55
Identity = 117/164 (71.34%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 1   MTRYIR-ALAANTSSAP---PPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG 60
           MTR  R  L+ N+SS P   PP  V +ESDFVVILAALLCALIC+VGLIAVARCAWLRRG
Sbjct: 51  MTRPSRFLLSTNSSSTPAAEPPSTVTVESDFVVILAALLCALICVVGLIAVARCAWLRRG 110

Query: 61  ---GGSVGNQASANRGLKKKILQSLPKFRY--KSTGGEGKIAAECAICLAEFMEGEEIRQ 120
              GG+ G+Q SAN+GLKKK+LQSLPKF Y   ST       AECAICLAE+  G+EIR 
Sbjct: 111 IGAGGNGGSQPSANKGLKKKVLQSLPKFTYDPSSTANGAAFTAECAICLAEYAVGDEIRV 170

Query: 121 LPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAV 156
           LPQCGH FH+ C+DTWLGSHSSCPSCRQILVVARC+KCG+FPAV
Sbjct: 171 LPQCGHSFHLQCIDTWLGSHSSCPSCRQILVVARCRKCGEFPAV 214

[Close]

BLAST of Cla97C10G184660 vs. TrEMBL
Match: tr|A0A1U8FV85|A0A1U8FV85_CAPAN (RING-H2 finger protein ATL8 OS=Capsicum annuum OX=4072 GN=LOC107859761 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.1e-55
Identity = 117/170 (68.82%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 1   MTRYIR-ALAANTSSAP---PPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRG 60
           MTR+ R  L+ N+SS P   PP AVA+ESDFVVILAALLCALIC+VGLIAVARCAWLRRG
Sbjct: 1   MTRHARFLLSTNSSSTPAAEPPSAVAVESDFVVILAALLCALICVVGLIAVARCAWLRRG 60

Query: 61  ---GGSVGNQASANRGLKKKILQSLPKFRYKSTGGE--------GKIAAECAICLAEFME 120
              GG+ G+Q SAN+GLKKK+LQSLPKF Y  +               AECAICLAE+  
Sbjct: 61  TGAGGNGGSQPSANKGLKKKVLQSLPKFTYDPSSSTAPAPANNGAPFTAECAICLAEYAV 120

Query: 121 GEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAV 156
           G+EIR LPQCGH FH+ C+DTWLGSHSSCPSCRQILVVARC+KCG+FPAV
Sbjct: 121 GDEIRVLPQCGHSFHLQCIDTWLGSHSSCPSCRQILVVARCRKCGEFPAV 170

[Close]

BLAST of Cla97C10G184660 vs. TrEMBL
Match: tr|A0A2K3M2X6|A0A2K3M2X6_TRIPR (RING-H2 finger protein ATL80-like OS=Trifolium pratense OX=57577 GN=L195_g041195 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.9e-54
Identity = 116/163 (71.17%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MTRYIRAL--AANTSS----APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTR +R L   AN ++    APPPEAVALESDFVVILAALLCALIC+VGLIAVARCAWLR
Sbjct: 1   MTRALRILNSTANITTVAVVAPPPEAVALESDFVVILAALLCALICVVGLIAVARCAWLR 60

Query: 61  R--GGGSVGNQASANRGLKKKILQSLPKFRY-KSTGGEGKIAAECAICLAEFMEGEEIRQ 120
           R  G G+   QA AN+GLKKK+LQSLPKF Y  S  G+     ECAICL++F  G+EIR 
Sbjct: 61  RDSGAGNSPQQALANKGLKKKVLQSLPKFAYVDSNPGKWLATTECAICLSDFAAGDEIRV 120

Query: 121 LPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPA 155
           LPQCGH FHV+C+DTWLGSHSSCPSCRQIL V RCQKCG+FPA
Sbjct: 121 LPQCGHGFHVACIDTWLGSHSSCPSCRQILAVTRCQKCGRFPA 163

[Close]

BLAST of Cla97C10G184660 vs. Swiss-Prot
Match: sp|Q8LC69|ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-43
Identity = 93/161 (57.76%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGG 60
           M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    
Sbjct: 1   MARLLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR 60

Query: 61  SVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQL 120
           +  +Q      A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R L
Sbjct: 61  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120

Query: 121 PQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFP 154
           PQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLP 161

[Close]

BLAST of Cla97C10G184660 vs. Swiss-Prot
Match: sp|Q9LM69|ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-40
Identity = 93/168 (55.36%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR-- 60
           M R +  L   +++  P       AL SD VVILAA        +GLIAV+RC WLRR  
Sbjct: 1   MARLLFRLLVESNTPSPAIDNSTAALNSDLVVILAAXXXXXXXXLGLIAVSRCVWLRRLA 60

Query: 61  -GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFME 120
            G  +V G+Q        A+AN+GLKKK+LQSLPK  +     E +  AECAICLAEF  
Sbjct: 61  AGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSA 120

Query: 121 GEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFP 154
           G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P
Sbjct: 121 GDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLP 168

[Close]

BLAST of Cla97C10G184660 vs. Swiss-Prot
Match: sp|O22755|ATL44_ARATH (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36
Identity = 81/133 (60.90%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRY 83
           ESD VVIL+ALLCALIC+ GL AV RCAWLRR     G+  S N+GLKKK LQSLP+  +
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAG-GDSPSPNKGLKKKALQSLPRSTF 84

Query: 84  ---KSTGG---EGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSC 143
              +ST G   E   + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSC
Sbjct: 85  TAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSC 144

Query: 144 RQILVVARCQKCG 151
           R+IL   RC +CG
Sbjct: 145 RRILTPVRCDRCG 156

[Close]

BLAST of Cla97C10G184660 vs. Swiss-Prot
Match: sp|Q9ZT49|ATL45_ARATH (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.2e-34
Identity = 74/135 (54.81%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 34  LLCALICMVGLIAVARCAWLRRGGG----SVGNQASANRGLKKKILQSLPKFRYK----- 93
           LLCAL+C+ GL AVARCAWLRR  G    +VG     N+GLKKK LQ+LPK  Y      
Sbjct: 33  LLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPPNKGLKKKALQALPKSTYTASAST 92

Query: 94  ---------STGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCP 151
                    S+ G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCP
Sbjct: 93  AAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCP 152

[Close]

BLAST of Cla97C10G184660 vs. Swiss-Prot
Match: sp|Q9LS99|ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 9   AANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGG---------GS 68
           A N   A  P+   L  + +++L+ LLC +IC +GL  + RCA++R             S
Sbjct: 34  AHNAQQAHVPDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPS 93

Query: 69  VGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCF 128
               +S N+G+KKK L+ LP   Y        +  EC ICL++F+ GE++R LP+C H F
Sbjct: 94  TPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGF 153

Query: 129 HVSCVDTWLGSHSSCPSCRQILVVARCQK 149
           H+ C+D WL  H +CP CR  L V  CQK
Sbjct: 154 HLRCIDKWLTQHMTCPKCRHCL-VDTCQK 181

[Close]

BLAST of Cla97C10G184660 vs. TAIR10
Match: AT1G76410.1 (RING/U-box superfamily protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-44
Identity = 93/161 (57.76%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPPEA-VALESDFVVILAALLCALICMVGLIAVARCAWLRR-GGG 60
           M R +  L    +S  P EA     SD V+ILA LLCAL C++GLIAV+RCAWLRR    
Sbjct: 1   MARLLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR 60

Query: 61  SVGNQ------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQL 120
           +  +Q      A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R L
Sbjct: 61  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120

Query: 121 PQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFP 154
           PQCGH FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLP 161

[Close]

BLAST of Cla97C10G184660 vs. TAIR10
Match: AT1G20823.1 (RING/U-box superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-41
Identity = 93/168 (55.36%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 1   MTRYIRALAANTSSAPPP---EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR-- 60
           M R +  L   +++  P       AL SD VVILAA        +GLIAV+RC WLRR  
Sbjct: 1   MARLLFRLLVESNTPSPAIDNSTAALNSDLVVILAAXXXXXXXXLGLIAVSRCVWLRRLA 60

Query: 61  -GGGSV-GNQ--------ASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFME 120
            G  +V G+Q        A+AN+GLKKK+LQSLPK  +     E +  AECAICLAEF  
Sbjct: 61  AGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSA 120

Query: 121 GEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFP 154
           G+E+R LPQCGH FHV+C+DTWLGSHSSCPSCRQILVVARC KCG  P
Sbjct: 121 GDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLP 168

[Close]

BLAST of Cla97C10G184660 vs. TAIR10
Match: AT2G17450.1 (RING-H2 finger A3A)

HSP 1 Score: 154.1 bits (388), Expect = 8.4e-38
Identity = 81/133 (60.90%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSVGNQASANRGLKKKILQSLPKFRY 83
           ESD VVIL+ALLCALIC+ GL AV RCAWLRR     G+  S N+GLKKK LQSLP+  +
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAG-GDSPSPNKGLKKKALQSLPRSTF 84

Query: 84  ---KSTGG---EGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSC 143
              +ST G   E   + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSC
Sbjct: 85  TAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSC 144

Query: 144 RQILVVARCQKCG 151
           R+IL   RC +CG
Sbjct: 145 RRILTPVRCDRCG 156

[Close]

BLAST of Cla97C10G184660 vs. TAIR10
Match: AT4G35480.1 (RING-H2 finger A3B)

HSP 1 Score: 144.8 bits (364), Expect = 5.1e-35
Identity = 74/135 (54.81%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 34  LLCALICMVGLIAVARCAWLRRGGG----SVGNQASANRGLKKKILQSLPKFRYK----- 93
           LLCAL+C+ GL AVARCAWLRR  G    +VG     N+GLKKK LQ+LPK  Y      
Sbjct: 33  LLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPPNKGLKKKALQALPKSTYTASAST 92

Query: 94  ---------STGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCP 151
                    S+ G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCP
Sbjct: 93  AAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCP 152

[Close]

BLAST of Cla97C10G184660 vs. TAIR10
Match: AT3G18773.1 (RING/U-box superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 4.1e-24
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 9   AANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGG---------GS 68
           A N   A  P+   L  + +++L+ LLC +IC +GL  + RCA++R             S
Sbjct: 34  AHNAQQAHVPDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPS 93

Query: 69  VGNQASANRGLKKKILQSLPKFRYKSTGGEGKIAAECAICLAEFMEGEEIRQLPQCGHCF 128
               +S N+G+KKK L+ LP   Y        +  EC ICL++F+ GE++R LP+C H F
Sbjct: 94  TPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGF 153

Query: 129 HVSCVDTWLGSHSSCPSCRQILVVARCQK 149
           H+ C+D WL  H +CP CR  L V  CQK
Sbjct: 154 HLRCIDKWLTQHMTCPKCRHCL-VDTCQK 181

The following BLAST results are available for this feature:

BLAST of Cla97C10G184660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449155.1	7.1e-75	92.35	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]	[more]
XP_004146217.1	3.0e-73	91.67	PREDICTED: RING-H2 finger protein ATL80 [Cucumis sativus] >KGN55591.1 hypothetic...	[more]
XP_022933605.1	1.9e-64	80.41	RING-H2 finger protein ATL8 [Cucurbita moschata]	[more]
XP_022971423.1	1.9e-64	80.41	RING-H2 finger protein ATL8 [Cucurbita maxima]	[more]
XP_023539225.1	9.6e-64	79.90	RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C10G184660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKT0\|A0A1S3BKT0_CUCME	4.7e-75	92.35	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1	[more]
tr\|A0A0A0L622\|A0A0A0L622_CUCSA	2.0e-73	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 PE=4 SV=1	[more]
tr\|K4BAB2\|K4BAB2_SOLLC	3.2e-55	71.34	Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1	[more]
tr\|A0A1U8FV85\|A0A1U8FV85_CAPAN	4.1e-55	68.82	RING-H2 finger protein ATL8 OS=Capsicum annuum OX=4072 GN=LOC107859761 PE=4 SV=1	[more]
tr\|A0A2K3M2X6\|A0A2K3M2X6_TRIPR	5.9e-54	71.17	RING-H2 finger protein ATL80-like OS=Trifolium pratense OX=57577 GN=L195_g041195...	[more]

BLAST of Cla97C10G184660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LC69\|ATL8_ARATH	2.2e-43	57.76	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
sp\|Q9LM69\|ATL80_ARATH	2.3e-40	55.36	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
sp\|O22755\|ATL44_ARATH	1.5e-36	60.90	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
sp\|Q9ZT49\|ATL45_ARATH	9.2e-34	54.81	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
sp\|Q9LS99\|ATL77_ARATH	7.3e-23	38.26	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]

BLAST of Cla97C10G184660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76410.1	1.2e-44	57.76	RING/U-box superfamily protein	[more]
AT1G20823.1	1.3e-41	55.36	RING/U-box superfamily protein	[more]
AT2G17450.1	8.4e-38	60.90	RING-H2 finger A3A	[more]
AT4G35480.1	5.1e-35	54.81	RING-H2 finger A3B	[more]
AT3G18773.1	4.1e-24	38.26	RING/U-box superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G184660.1	Cla97C10G184660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 96..137 e-value: 1.5E-5 score: 34.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 95..138 e-value: 3.6E-14 score: 52.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 96..138 score: 12.386
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 92..146 e-value: 0.0056 score: 0.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..181
None	No IPR available	PANTHER	PTHR14155:SF187	SUBFAMILY NOT NAMED	coord: 1..167
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..167
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 76..144
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 59..142 e-value: 9.5E-24 score: 84.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C10G184660	Cla008958	Watermelon (97103) v1	wmwmbB056
Cla97C10G184660	Csa3G000150	Cucumber (Chinese Long) v2	cuwmbB181
Cla97C10G184660	MELO3C013708	Melon (DHL92) v3.5.1	mewmbB430
Cla97C10G184660	ClCG10G000130	Watermelon (Charleston Gray)	wcgwmbB038
Cla97C10G184660	CSPI03G00140	Wild cucumber (PI 183967)	cpiwmbB184
Cla97C10G184660	Cucsa.323250	Cucumber (Gy14) v1	cgywmbB562
Cla97C10G184660	CmaCh06G001690	Cucurbita maxima (Rimu)	cmawmbB846
Cla97C10G184660	CmoCh06G001590	Cucurbita moschata (Rifu)	cmowmbB820
Cla97C10G184660	Lsi07G010380	Bottle gourd (USVL1VR-Ls)	lsiwmbB395
Cla97C10G184660	MELO3C013708.2	Melon (DHL92) v3.6.1	medwmbB415
Cla97C10G184660	Carg01168	Silver-seed gourd	carwmbB0160
Cla97C10G184660	Bhi11G000269	Wax gourd	wgowmbB021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C10G184660	Watermelon (97103) v2	wmbwmbB003
Cla97C10G184660	Silver-seed gourd	carwmbB0453
Cla97C10G184660	Silver-seed gourd	carwmbB0670
Cla97C10G184660	Cucumber (Gy14) v2	cgybwmbB174
Cla97C10G184660	Cucumber (Gy14) v2	cgybwmbB400
Cla97C10G184660	Cucumber (Gy14) v1	cgywmbB019
Cla97C10G184660	Cucurbita maxima (Rimu)	cmawmbB337
Cla97C10G184660	Cucurbita maxima (Rimu)	cmawmbB446
Cla97C10G184660	Cucurbita maxima (Rimu)	cmawmbB878
Cla97C10G184660	Cucurbita moschata (Rifu)	cmowmbB320
Cla97C10G184660	Cucurbita moschata (Rifu)	cmowmbB427
Cla97C10G184660	Cucurbita moschata (Rifu)	cmowmbB645
Cla97C10G184660	Cucurbita moschata (Rifu)	cmowmbB852
Cla97C10G184660	Wild cucumber (PI 183967)	cpiwmbB444
Cla97C10G184660	Cucumber (Chinese Long) v3	cucwmbB182
Cla97C10G184660	Cucumber (Chinese Long) v3	cucwmbB265
Cla97C10G184660	Cucumber (Chinese Long) v3	cucwmbB438
Cla97C10G184660	Cucumber (Chinese Long) v2	cuwmbB420
Cla97C10G184660	Bottle gourd (USVL1VR-Ls)	lsiwmbB118
Cla97C10G184660	Melon (DHL92) v3.6.1	medwmbB512
Cla97C10G184660	Melon (DHL92) v3.5.1	mewmbB520
Cla97C10G184660	Watermelon (Charleston Gray)	wcgwmbB095
Cla97C10G184660	Watermelon (97103) v1	wmwmbB253
Cla97C10G184660	Wax gourd	wgowmbB409