Bhi11G000269 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000269
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	RING-H2 finger protein
Location	chr11 : 7606517 .. 7607053 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGCTATATCAGAGCTCTCGCCGGGAATACTTCGTTGGCACCTCCGCCGGAGGCGGTGGCCATGGAGTCGGACTTCGTGGTCATTCTGGCGGCGTTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGGGGAGGCAGTGCAGGAAATCAGGCGTCGGCGAATAGGGGACTGAAGAAGAAGATCCTGCAGTCGCTCCCAAAATTCAAGTACAAGTCGACGGGGGGAGAGGGGAAAATAGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGCGGGCATTGCTTCCACGTTAGCTGCGTAGACACGTGGCTGGGGTCCCACTCCTCATGCCCTTCCTGCCGCCAGATTTTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCGGTGGTGCAAGGCGGCGCTGCTCACAACAACGAGGAGGTGGAAGATAACAACAGGGGTTTGGGATTTCTGCCTTGA

mRNA sequence

ATGACTCGCTATATCAGAGCTCTCGCCGGGAATACTTCGTTGGCACCTCCGCCGGAGGCGGTGGCCATGGAGTCGGACTTCGTGGTCATTCTGGCGGCGTTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGGGGAGGCAGTGCAGGAAATCAGGCGTCGGCGAATAGGGGACTGAAGAAGAAGATCCTGCAGTCGCTCCCAAAATTCAAGTACAAGTCGACGGGGGGAGAGGGGAAAATAGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGCGGGCATTGCTTCCACGTTAGCTGCGTAGACACGTGGCTGGGGTCCCACTCCTCATGCCCTTCCTGCCGCCAGATTTTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCGGTGGTGCAAGGCGGCGCTGCTCACAACAACGAGGAGGTGGAAGATAACAACAGGGGTTTGGGATTTCTGCCTTGA

Coding sequence (CDS)

ATGACTCGCTATATCAGAGCTCTCGCCGGGAATACTTCGTTGGCACCTCCGCCGGAGGCGGTGGCCATGGAGTCGGACTTCGTGGTCATTCTGGCGGCGTTGCTGTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCGTGGCTCCGGCGTGGGGGAGGCAGTGCAGGAAATCAGGCGTCGGCGAATAGGGGACTGAAGAAGAAGATCCTGCAGTCGCTCCCAAAATTCAAGTACAAGTCGACGGGGGGAGAGGGGAAAATAGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAGGGGGAGGAGATCCGGCAGCTGCCGCAGTGCGGGCATTGCTTCCACGTTAGCTGCGTAGACACGTGGCTGGGGTCCCACTCCTCATGCCCTTCCTGCCGCCAGATTTTGGTAGTGGCGAGATGCCAGAAGTGCGGGCAGTTTCCGGCGGTGGTGCAAGGCGGCGCTGCTCACAACAACGAGGAGGTGGAAGATAACAACAGGGGTTTGGGATTTCTGCCTTGA

Protein sequence

MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEVEDNNRGLGFLP

Homology

[Close]

BLAST of Bhi11G000269 vs. TAIR10
Match: AT1G76410.1 (RING/U-box superfamily protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-44
Identity = 91/161 (56.52%), Postives = 107/161 (66.46%), Query Frame = 0


Query: 6   RALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSAGNQ- 65
           R L    S +P   +    SD V+ILA LLCAL C++GLIAV+RCAWLRR    +  +Q 
Sbjct: 7   RLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQT 66

Query: 66  -----ASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHC 125
                A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R LPQCGH 
Sbjct: 67  HPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHG 126

Query: 126 FHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGG 160
           FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P     G
Sbjct: 127 FHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSG 167

[Close]

BLAST of Bhi11G000269 vs. TAIR10
Match: AT1G20823.1 (RING/U-box superfamily protein)

HSP 1 Score: 166.0 bits (419), Expect = 2.1e-41
Identity = 88/152 (57.89%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 22  AMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQ--------------ASAN 81
           A+ SD VVILAA        +GLIAV+RC WLRR   +AGN+              A+AN
Sbjct: 25  ALNSDLVVILAAXXXXXXXXLGLIAVSRCVWLRR--LAAGNRTVSGSQTQSPQPPVAAAN 84

Query: 82  RGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTW 141
           +GLKKK+LQSLPK  +     E +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTW
Sbjct: 85  KGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTW 144

Query: 142 LGSHSSCPSCRQILVVARCQKCGQFPAVVQGG 160
           LGSHSSCPSCRQILVVARC KCG  P     G
Sbjct: 145 LGSHSSCPSCRQILVVARCHKCGGLPGSSSSG 174

[Close]

BLAST of Bhi11G000269 vs. TAIR10
Match: AT2G17450.1 (RING-H2 finger A3A)

HSP 1 Score: 154.5 bits (389), Expect = 6.3e-38
Identity = 81/133 (60.90%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFKY 83
           ESD VVIL+ALLCALIC+ GL AV RCAWLRR   + G+  S N+GLKKK LQSLP+  +
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRR-FTAGGDSPSPNKGLKKKALQSLPRSTF 84

Query: 84  ---KSTGG---EGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSC 143
              +ST G   E   + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSC
Sbjct: 85  TAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSC 144

Query: 144 RQILVVARCQKCG 151
           R+IL   RC +CG
Sbjct: 145 RRILTPVRCDRCG 156

[Close]

BLAST of Bhi11G000269 vs. TAIR10
Match: AT4G35480.1 (RING-H2 finger A3B)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 73/142 (51.41%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 34  LLCALICMVGLIAVARCAWLRRGGG----SAGNQASANRGLKKKILQSLPKFKYK----- 93
           LLCAL+C+ GL AVARCAWLRR  G    + G     N+GLKKK LQ+LPK  Y      
Sbjct: 33  LLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPPNKGLKKKALQALPKSTYTASAST 92

Query: 94  ---------STGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCP 153
                    S+ G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCP
Sbjct: 93  AAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCP 152

Query: 154 SCRQILVVARCQKCGQFPAVVQ 158
           SCR+ILV  +C +CG   +  +
Sbjct: 153 SCRRILVPVKCDRCGHHASTAE 174

[Close]

BLAST of Bhi11G000269 vs. TAIR10
Match: AT3G18773.1 (RING/U-box superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 9   AGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGG---------GS 68
           A N   A  P+   +  + +++L+ LLC +IC +GL  + RCA++R             S
Sbjct: 34  AHNAQQAHVPDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPS 93

Query: 69  AGNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCF 128
               +S N+G+KKK L+ LP   Y        +  EC ICL++F+ GE++R LP+C H F
Sbjct: 94  TPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGF 153

Query: 129 HVSCVDTWLGSHSSCPSCRQILVVARCQK 149
           H+ C+D WL  H +CP CR  L V  CQK
Sbjct: 154 HLRCIDKWLTQHMTCPKCRHCL-VDTCQK 181

[Close]

BLAST of Bhi11G000269 vs. Swiss-Prot
Match: sp|Q8LC69|ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-43
Identity = 91/161 (56.52%), Postives = 107/161 (66.46%), Query Frame = 0


Query: 6   RALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRR-GGGSAGNQ- 65
           R L    S +P   +    SD V+ILA LLCAL C++GLIAV+RCAWLRR    +  +Q 
Sbjct: 7   RLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQT 66

Query: 66  -----ASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHC 125
                A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R LPQCGH 
Sbjct: 67  HPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHG 126

Query: 126 FHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGG 160
           FHVSC+DTWLGSHSSCPSCRQILVV RC KCG  P     G
Sbjct: 127 FHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSG 167

[Close]

BLAST of Bhi11G000269 vs. Swiss-Prot
Match: sp|Q9LM69|ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.8e-40
Identity = 88/152 (57.89%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 22  AMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQ--------------ASAN 81
           A+ SD VVILAA        +GLIAV+RC WLRR   +AGN+              A+AN
Sbjct: 25  ALNSDLVVILAAXXXXXXXXLGLIAVSRCVWLRR--LAAGNRTVSGSQTQSPQPPVAAAN 84

Query: 82  RGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTW 141
           +GLKKK+LQSLPK  +     E +  AECAICLAEF  G+E+R LPQCGH FHV+C+DTW
Sbjct: 85  KGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTW 144

Query: 142 LGSHSSCPSCRQILVVARCQKCGQFPAVVQGG 160
           LGSHSSCPSCRQILVVARC KCG  P     G
Sbjct: 145 LGSHSSCPSCRQILVVARCHKCGGLPGSSSSG 174

[Close]

BLAST of Bhi11G000269 vs. Swiss-Prot
Match: sp|O22755|ATL44_ARATH (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 81/133 (60.90%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSAGNQASANRGLKKKILQSLPKFKY 83
           ESD VVIL+ALLCALIC+ GL AV RCAWLRR   + G+  S N+GLKKK LQSLP+  +
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRR-FTAGGDSPSPNKGLKKKALQSLPRSTF 84

Query: 84  ---KSTGG---EGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSC 143
              +ST G   E   + ECAICL +F +GEEIR LP CGH FHV C+D WL S SSCPSC
Sbjct: 85  TAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSC 144

Query: 144 RQILVVARCQKCG 151
           R+IL   RC +CG
Sbjct: 145 RRILTPVRCDRCG 156

[Close]

BLAST of Bhi11G000269 vs. Swiss-Prot
Match: sp|Q9ZT49|ATL45_ARATH (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-33
Identity = 73/142 (51.41%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 34  LLCALICMVGLIAVARCAWLRRGGG----SAGNQASANRGLKKKILQSLPKFKYK----- 93
           LLCAL+C+ GL AVARCAWLRR  G    + G     N+GLKKK LQ+LPK  Y      
Sbjct: 33  LLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPPNKGLKKKALQALPKSTYTASAST 92

Query: 94  ---------STGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGSHSSCP 153
                    S+ G+G  + ECAIC+ EF EGEEIR LP C H FHV+C+D WL S SSCP
Sbjct: 93  AAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCP 152

Query: 154 SCRQILVVARCQKCGQFPAVVQ 158
           SCR+ILV  +C +CG   +  +
Sbjct: 153 SCRRILVPVKCDRCGHHASTAE 174

[Close]

BLAST of Bhi11G000269 vs. Swiss-Prot
Match: sp|Q9LS99|ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22
Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 9   AGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGG---------GS 68
           A N   A  P+   +  + +++L+ LLC +IC +GL  + RCA++R             S
Sbjct: 34  AHNAQQAHVPDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPS 93

Query: 69  AGNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCF 128
               +S N+G+KKK L+ LP   Y        +  EC ICL++F+ GE++R LP+C H F
Sbjct: 94  TPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGF 153

Query: 129 HVSCVDTWLGSHSSCPSCRQILVVARCQK 149
           H+ C+D WL  H +CP CR  L V  CQK
Sbjct: 154 HLRCIDKWLTQHMTCPKCRHCL-VDTCQK 181

[Close]

BLAST of Bhi11G000269 vs. TrEMBL
Match: tr|A0A1S3BKT0|A0A1S3BKT0_CUCME (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.1e-74
Identity = 148/183 (80.87%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 1   MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSA 60
           M+ YIRAL  NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKF+YKST G+GKIAAECAICLAEFLEGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV-----QGGAAHNNEEVEDNNRGLG 179
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV                    RGLG
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVXXXXXXXXXXXXXXXXXXXXRGLG 178

[Close]

BLAST of Bhi11G000269 vs. TrEMBL
Match: tr|A0A0A0L622|A0A0A0L622_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-73
Identity = 142/158 (89.87%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSA 60
           M+ YIRAL  NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKF+YKST G+GKIAAECAICLAEFLEGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQG 159
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQG
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPADVQG 153

[Close]

BLAST of Bhi11G000269 vs. TrEMBL
Match: tr|K4BAB2|K4BAB2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.1e-55
Identity = 115/164 (70.12%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 1   MTRYIRAL----AGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRG 60
           MTR  R L    + +T  A PP  V +ESDFVVILAALLCALIC+VGLIAVARCAWLRRG
Sbjct: 51  MTRPSRFLLSTNSSSTPAAEPPSTVTVESDFVVILAALLCALICVVGLIAVARCAWLRRG 110

Query: 61  ---GGSAGNQASANRGLKKKILQSLPKFKY--KSTGGEGKIAAECAICLAEFLEGEEIRQ 120
              GG+ G+Q SAN+GLKKK+LQSLPKF Y   ST       AECAICLAE+  G+EIR 
Sbjct: 111 IGAGGNGGSQPSANKGLKKKVLQSLPKFTYDPSSTANGAAFTAECAICLAEYAVGDEIRV 170

Query: 121 LPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAV 156
           LPQCGH FH+ C+DTWLGSHSSCPSCRQILVVARC+KCG+FPAV
Sbjct: 171 LPQCGHSFHLQCIDTWLGSHSSCPSCRQILVVARCRKCGEFPAV 214

[Close]

BLAST of Bhi11G000269 vs. TrEMBL
Match: tr|A0A1U8FV85|A0A1U8FV85_CAPAN (RING-H2 finger protein ATL8 OS=Capsicum annuum OX=4072 GN=LOC107859761 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.0e-55
Identity = 115/170 (67.65%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 1   MTRYIRAL----AGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRG 60
           MTR+ R L    + +T  A PP AVA+ESDFVVILAALLCALIC+VGLIAVARCAWLRRG
Sbjct: 1   MTRHARFLLSTNSSSTPAAEPPSAVAVESDFVVILAALLCALICVVGLIAVARCAWLRRG 60

Query: 61  ---GGSAGNQASANRGLKKKILQSLPKFKYKSTGGE--------GKIAAECAICLAEFLE 120
              GG+ G+Q SAN+GLKKK+LQSLPKF Y  +               AECAICLAE+  
Sbjct: 61  TGAGGNGGSQPSANKGLKKKVLQSLPKFTYDPSSSTAPAPANNGAPFTAECAICLAEYAV 120

Query: 121 GEEIRQLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAV 156
           G+EIR LPQCGH FH+ C+DTWLGSHSSCPSCRQILVVARC+KCG+FPAV
Sbjct: 121 GDEIRVLPQCGHSFHLQCIDTWLGSHSSCPSCRQILVVARCRKCGEFPAV 170

[Close]

BLAST of Bhi11G000269 vs. TrEMBL
Match: tr|D7SWC6|D7SWC6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g02250 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 9.0e-55
Identity = 124/186 (66.67%), Postives = 145/186 (77.96%), Query Frame = 0


Query: 1   MTRYIRALAG-NTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRG--G 60
           MTR  R L+  N+S A PPEAV +ESDFVVILAALLCALIC+VGLIAVARCAWLRRG  G
Sbjct: 1   MTRSSRFLSSWNSSAAEPPEAVEVESDFVVILAALLCALICVVGLIAVARCAWLRRGSAG 60

Query: 61  G--SAGNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQC 120
           G  ++  Q +AN+GLKKKILQSLPK  + +T   GK  AECAICLAEF+EG+EIR LPQC
Sbjct: 61  GARASATQPAANKGLKKKILQSLPKLTHDAT-VSGKF-AECAICLAEFVEGDEIRVLPQC 120

Query: 121 GHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEVEDNNRGL- 179
           GH FHV CVDTWL SHSSCPSCRQILVV RC++CG+FPA+   G A ++ E++   +G  
Sbjct: 121 GHGFHVLCVDTWLSSHSSCPSCRQILVVTRCRQCGKFPAI--SGTATSDAELKAREQGTA 180

[Close]

BLAST of Bhi11G000269 vs. NCBI nr
Match: XP_008449155.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 7.7e-74
Identity = 148/183 (80.87%), Postives = 153/183 (83.61%), Query Frame = 0


Query: 1   MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSA 60
           M+ YIRAL  NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKF+YKST G+GKIAAECAICLAEFLEGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVV-----QGGAAHNNEEVEDNNRGLG 179
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVV                    RGLG
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVXXXXXXXXXXXXXXXXXXXXRGLG 178

[Close]

BLAST of Bhi11G000269 vs. NCBI nr
Match: XP_004146217.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis sativus] >KGN55591.1 hypothetical protein Csa_3G000150 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 142/158 (89.87%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSA 60
           M+ YIRAL  NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60

Query: 61  GNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKF+YKST G+GKIAAECAICLAEFLEGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQG 159
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPA VQG
Sbjct: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPADVQG 153

[Close]

BLAST of Bhi11G000269 vs. NCBI nr
Match: XP_022933605.1 (RING-H2 finger protein ATL8 [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 143/194 (73.71%), Postives = 149/194 (76.80%), Query Frame = 0


Query: 1   MTRYIRALAGNTS------LAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY +ALAGNTS               MESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 1   MTRYFQALAGNTSXXXXXXXXXXXXXXXMESDFVVILAALLCALICMVGLIAVARCAWLR 60

Query: 61  RG--GGSAGNQASANRGLKKKILQSLPKFKYKS--TGGEGKIAAECAICLAEFLEGEEIR 120
           RG  GG AGNQASANRGLKKKILQSLPKF Y++  +GGE K AAECAICLAEFL+GEEIR
Sbjct: 61  RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIR 120

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQG------GAAHNN 179
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV G            
Sbjct: 121 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGXXXXXXXXXXXX 180

[Close]

BLAST of Bhi11G000269 vs. NCBI nr
Match: XP_022971423.1 (RING-H2 finger protein ATL8 [Cucurbita maxima])

HSP 1 Score: 263.8 bits (673), Expect = 4.1e-67
Identity = 142/194 (73.20%), Postives = 148/194 (76.29%), Query Frame = 0


Query: 1   MTRYIRALAGNT------SLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY++ALAGNT                 ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYLQALAGNTXXXXXXXXXXXXXXXXXESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  RG--GGSAGNQASANRGLKKKILQSLPKFKYKS--TGGEGKIAAECAICLAEFLEGEEIR 120
           RG  GG AGNQASANRGLKKKILQSLPKF Y++  +GGEGK AAECAICLAEFL+GEEIR
Sbjct: 101 RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQG------GAAHNN 179
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG FPAVV G            
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGDFPAVVHGXXXXXXXXXXXX 220

[Close]

BLAST of Bhi11G000269 vs. NCBI nr
Match: XP_023539225.1 (RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 140/194 (72.16%), Postives = 146/194 (75.26%), Query Frame = 0


Query: 1   MTRYIRALAGNT------SLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLR 60
           MTRY +ALAGNT                 ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYFQALAGNTXXXXXXXXXXXXXXXXXESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  RG--GGSAGNQASANRGLKKKILQSLPKFKYKS--TGGEGKIAAECAICLAEFLEGEEIR 120
           RG   G AGNQASANRGLKKKILQSLPKF Y++  +GGEGK AAECAICLAEFL+GEEIR
Sbjct: 101 RGSNSGGAGNQASANRGLKKKILQSLPKFTYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQ------GGAAHNN 179
           QLPQCGHCFHVSCVDTWL SHSSCPSCRQILVVARCQKCG+FPAVV              
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHXXXXXXXXXXXXX 220

The following BLAST results are available for this feature:

BLAST of Bhi11G000269 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76410.1	1.2e-44	56.52	RING/U-box superfamily protein	[more]
AT1G20823.1	2.1e-41	57.89	RING/U-box superfamily protein	[more]
AT2G17450.1	6.3e-38	60.90	RING-H2 finger A3A	[more]
AT4G35480.1	1.5e-34	51.41	RING-H2 finger A3B	[more]
AT3G18773.1	1.2e-23	37.58	RING/U-box superfamily protein	[more]

BLAST of Bhi11G000269 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LC69\|ATL8_ARATH	2.1e-43	56.52	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
sp\|Q9LM69\|ATL80_ARATH	3.8e-40	57.89	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
sp\|O22755\|ATL44_ARATH	1.1e-36	60.90	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
sp\|Q9ZT49\|ATL45_ARATH	2.6e-33	51.41	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
sp\|Q9LS99\|ATL77_ARATH	2.1e-22	37.58	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]

BLAST of Bhi11G000269 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKT0\|A0A1S3BKT0_CUCME	5.1e-74	80.87	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1	[more]
tr\|A0A0A0L622\|A0A0A0L622_CUCSA	1.5e-73	89.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 PE=4 SV=1	[more]
tr\|K4BAB2\|K4BAB2_SOLLC	3.1e-55	70.12	Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1	[more]
tr\|A0A1U8FV85\|A0A1U8FV85_CAPAN	4.0e-55	67.65	RING-H2 finger protein ATL8 OS=Capsicum annuum OX=4072 GN=LOC107859761 PE=4 SV=1	[more]
tr\|D7SWC6\|D7SWC6_VITVI	9.0e-55	66.67	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0031g02250 PE=4 SV=...	[more]

BLAST of Bhi11G000269 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449155.1	7.7e-74	80.87	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo]	[more]
XP_004146217.1	2.2e-73	89.87	PREDICTED: RING-H2 finger protein ATL80 [Cucumis sativus] >KGN55591.1 hypothetic...	[more]
XP_022933605.1	1.8e-67	73.71	RING-H2 finger protein ATL8 [Cucurbita moschata]	[more]
XP_022971423.1	4.1e-67	73.20	RING-H2 finger protein ATL8 [Cucurbita maxima]	[more]
XP_023539225.1	1.3e-65	72.16	RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000269	Bhi11M000269	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 92..146 e-value: 0.0017 score: 4.8
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..166
None	No IPR available	PANTHER	PTHR14155:SF187	SUBFAMILY NOT NAMED	coord: 1..166
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 75..144
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 96..137 e-value: 1.5E-5 score: 34.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 95..138 e-value: 2.6E-14 score: 53.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 96..138 score: 12.312
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 58..142 e-value: 6.0E-24 score: 85.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G000269	Csa3G000150	Cucumber (Chinese Long) v2	cuwgoB245
Bhi11G000269	MELO3C013708	Melon (DHL92) v3.5.1	mewgoB501
Bhi11G000269	ClCG10G000130	Watermelon (Charleston Gray)	wcgwgoB101
Bhi11G000269	CSPI03G00140	Wild cucumber (PI 183967)	cpiwgoB246
Bhi11G000269	Cucsa.323250	Cucumber (Gy14) v1	cgywgoB643
Bhi11G000269	CmaCh06G001690	Cucurbita maxima (Rimu)	cmawgoB0983
Bhi11G000269	CmoCh06G001590	Cucurbita moschata (Rifu)	cmowgoB0977
Bhi11G000269	Lsi07G010380	Bottle gourd (USVL1VR-Ls)	lsiwgoB540
Bhi11G000269	Cp4.1LG08g12810	Cucurbita pepo (Zucchini)	cpewgoB1091
Bhi11G000269	MELO3C013708.2	Melon (DHL92) v3.6.1	medwgoB510
Bhi11G000269	Carg01168	Silver-seed gourd	carwgoB0201
Bhi11G000269	Cla008958	Watermelon (97103) v1	wgowmB015
Bhi11G000269	Cla97C10G184660	Watermelon (97103) v2	wgowmbB021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000269	Cucumber (Gy14) v2	cgybwgoB235
Bhi11G000269	Cucurbita maxima (Rimu)	cmawgoB0415
Bhi11G000269	Cucurbita moschata (Rifu)	cmowgoB0411
Bhi11G000269	Cucurbita pepo (Zucchini)	cpewgoB0273
Bhi11G000269	Cucumber (Chinese Long) v3	cucwgoB250
Bhi11G000269	Cucumber (Chinese Long) v3	cucwgoB359
Bhi11G000269	Silver-seed gourd	carwgoB0515