Cla97C09G166680 (gene) Watermelon (97103) v2

NameCla97C09G166680
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
LocationCla97Chr09 : 3675871 .. 3676359 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTAAATTTTTTTCTTGCATCCTGATCTCTACATCTTTCAAGTTGTTTTTGTGTTGAAGACGGTTGGAATGTCTTGAATCTGATATTGCTTTATGTTTTCTGTTCATCTTTGATTGTTGATTTCTTAACAAAGATTCATGAGAAACTTGGTTTTGTTTTTGGGTTTCTATTGCAGGTTTCTAG

mRNA sequence

ATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTTTCTAG

Coding sequence (CDS)

ATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTTTCTAG

Protein sequence

MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLCCNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF
BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_008461263.1 (PREDICTED: protein LIM1-like [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45
Identity = 90/104 (86.54%), Postives = 99/104 (95.19%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MKQA FK L+FLVF++AIA FLGQGKAKFCSNSLI SLVQL+PCRP+LSPFHPIPPS LC
Sbjct: 1   MKQAIFKPLEFLVFILAIASFLGQGKAKFCSNSLIYSLVQLLPCRPSLSPFHPIPPSPLC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 105
           CNAI+TLGQSC+CALLDAPPVSGVDYNLAMSLPQKCA+NF+PCF
Sbjct: 61  CNAIETLGQSCICALLDAPPVSGVDYNLAMSLPQKCASNFEPCF 104

BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_004135913.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus] >KGN45155.1 hypothetical protein Csa_7G428920 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-45
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MKQA FK L+FLVFM+AI  FLGQ KAKFCSNSLI SLVQLIPCRP+LSPFHPIPPSL+C
Sbjct: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 105
           C+AIKTLGQSC+CALLDAPPVSGVDYNLAMSLPQKCA NF+PCF
Sbjct: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104

BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_023514059.1 (putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.6 bits (444), Expect = 8.6e-41
Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MK   FK LQFLVFM+A+ CF+ Q KAKFCSNSLIS+LVQLIPC+P+LSPF P+PPSLLC
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEQSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 105
           C+A+KTLGQ CLCA+LDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_023004704.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima])

HSP 1 Score: 173.3 bits (438), Expect = 4.2e-40
Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MK   FK LQFLVFM+A+ CF+   KAKFCSNSLIS+LVQLIPC+P+LSPF P+PPSLLC
Sbjct: 1   MKPGSFKPLQFLVFMIAMTCFVEPSKAKFCSNSLISTLVQLIPCKPSLSPFSPMPPSLLC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 105
           C+A+KTLGQ CLCA+LDAPPVSG+DYN+AM LPQKCA NF PCF
Sbjct: 61  CHALKTLGQPCLCAVLDAPPVSGIDYNVAMLLPQKCALNFHPCF 104

BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_002263374.1 (PREDICTED: protein LIM1 [Vitis vinifera])

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28
Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           +  +KF ++  LVF++ IA  +GQGK   C  S  S+L+Q+IPCR A++PF PIPPS  C
Sbjct: 3   LSHSKF-SVPVLVFLLVIAGLVGQGKGTTCGTSFFSALIQMIPCRAAVAPFSPIPPSEAC 62

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPC 104
           CNA++TLGQ CLC L++ PP+SGVD N+AM LP+KC TNFDPC
Sbjct: 63  CNAVRTLGQPCLCVLVNGPPISGVDRNMAMLLPEKCTTNFDPC 104

BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|A0A1S3CEQ8|A0A1S3CEQ8_CUCME (protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 7.6e-46
Identity = 90/104 (86.54%), Postives = 99/104 (95.19%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MKQA FK L+FLVF++AIA FLGQGKAKFCSNSLI SLVQL+PCRP+LSPFHPIPPS LC
Sbjct: 1   MKQAIFKPLEFLVFILAIASFLGQGKAKFCSNSLIYSLVQLLPCRPSLSPFHPIPPSPLC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 105
           CNAI+TLGQSC+CALLDAPPVSGVDYNLAMSLPQKCA+NF+PCF
Sbjct: 61  CNAIETLGQSCICALLDAPPVSGVDYNLAMSLPQKCASNFEPCF 104

BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|A0A0A0K635|A0A0A0K635_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MKQA FK L+FLVFM+AI  FLGQ KAKFCSNSLI SLVQLIPCRP+LSPFHPIPPSL+C
Sbjct: 1   MKQAIFKPLEFLVFMLAITSFLGQAKAKFCSNSLIYSLVQLIPCRPSLSPFHPIPPSLVC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF 105
           C+AIKTLGQSC+CALLDAPPVSGVDYNLAMSLPQKCA NF+PCF
Sbjct: 61  CDAIKTLGQSCICALLDAPPVSGVDYNLAMSLPQKCAANFEPCF 104

BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|A5AEY0|A5AEY0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_043972 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-28
Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           +  +KF ++  LVF++ IA   GQGK   C  S  S+L+Q+IPCR A++PF PIPPS  C
Sbjct: 341 LSHSKF-SVPVLVFLLVIAGLAGQGKGTTCGTSFFSALIQMIPCRAAVAPFSPIPPSEAC 400

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPC 104
           CNA++TLGQ CLC L++ PP+SGVD N+AM LP+KC TNFDPC
Sbjct: 401 CNAVRTLGQPCLCVLVNGPPISGVDRNMAMLLPEKCTTNFDPC 442

BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|V4SWN4|V4SWN4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MK +  K L  L+ ++ +  F+ QG +  C+N+ IS+LVQLIPCRPA+SPF PIPPS  C
Sbjct: 1   MKLSGTKALPILLLVLVMTSFMEQGNSHPCANTFISTLVQLIPCRPAVSPFSPIPPSEAC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPC 104
           CNAIK LGQ CLC L++ PP++G+D N+A+ LP KC  NF+PC
Sbjct: 61  CNAIKALGQPCLCVLINGPPIAGIDRNVALQLPDKCIANFEPC 103

BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|V4VI71|V4VI71_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MK +  K L  L+ ++ +  F+ QG +  C+N+ IS+LVQLIPCRPA+SPF PIPPS  C
Sbjct: 1   MKLSGTKALPILLLVLVMTSFMEQGNSHPCANTFISTLVQLIPCRPAVSPFSPIPPSEAC 60

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPC 104
           CNAIK LGQ CLC L++ PP++G+D N+A+ LP KC  NF+PC
Sbjct: 61  CNAIKALGQPCLCVLINGPPIAGIDRNVALQLPDKCIANFEPC 103

BLAST of Cla97C09G166680 vs. TAIR10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-23
Identity = 42/74 (56.76%), Postives = 59/74 (79.73%), Query Frame = 0

Query: 30  CSNSLISSLVQLIPCRPALSPFHPIPPSLLCCNAIKTLGQSCLCALLDAPPVSGVDYNLA 89
           CS +  S+LVQLIPCR A++PF PIPP+ +CC+A+ TLG+ CLC L + PP+SG+D ++A
Sbjct: 48  CSRTFFSALVQLIPCRAAVAPFSPIPPTEICCSAVVTLGRPCLCLLANGPPLSGIDRSMA 107

Query: 90  MSLPQKCATNFDPC 104
           + LPQ+C+ NF PC
Sbjct: 108 LQLPQRCSANFPPC 121

BLAST of Cla97C09G166680 vs. TAIR10
Match: AT3G07450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 4.9e-22
Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 0

Query: 1   MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLC 60
           MK+++  T+  L+ M+  +  + +     C  + +S+L+QL+PCRP+++PF  +PP+ LC
Sbjct: 4   MKKSQVFTVMLLMVMVQ-SGLVRETLGHPCGRTFLSALIQLVPCRPSVAPFSTLPPNGLC 63

Query: 61  CNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPC 104
           C AIKTLGQ CLC L   PP+ GVD  LA+ LP KC+ NF PC
Sbjct: 64  CAAIKTLGQPCLCVLAKGPPIVGVDRTLALHLPGKCSANFLPC 105

BLAST of Cla97C09G166680 vs. TAIR10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 6.2e-09
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0

Query: 40  QLIPCRPALSPFHPIPPSLLCCNAIKTLGQSCLCALLDAPPVS--GVDYNLAMSLPQKC- 99
           +L  C PA+S  +P  PSLLCCNA+K    +CLC   ++P +   GVD  LA SLP++C 
Sbjct: 35  ELNECLPAVSKNNPTSPSLLCCNALKHADYTCLCGYKNSPWLGSFGVDPKLASSLPKECD 94

Query: 100 ATNFDPC 104
            TN   C
Sbjct: 95  LTNAPTC 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008461263.11.2e-4586.54PREDICTED: protein LIM1-like [Cucumis melo][more]
XP_004135913.12.0e-4586.54PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus] >KGN45155.1 hy... [more]
XP_023514059.18.6e-4176.92putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo][more]
XP_023004704.14.2e-4075.96putative lipid-transfer protein DIR1 [Cucurbita maxima][more]
XP_002263374.13.7e-2857.28PREDICTED: protein LIM1 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
tr|A0A1S3CEQ8|A0A1S3CEQ8_CUCME7.6e-4686.54protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1[more]
tr|A0A0A0K635|A0A0A0K635_CUCSA1.3e-4586.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV=1[more]
tr|A5AEY0|A5AEY0_VITVI4.2e-2857.28Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_043972 PE=4 SV=1[more]
tr|V4SWN4|V4SWN4_9ROSI1.6e-2755.34Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg PE=4 ... [more]
tr|V4VI71|V4VI71_9ROSI1.6e-2755.34Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg PE=4 ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT3G52130.12.0e-2356.76Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT3G07450.14.9e-2245.63Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G48490.16.2e-0946.27Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009627systemic acquired resistance
Vocabulary: Molecular Function
TermDefinition
GO:0005504fatty acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036312Bifun_inhib/LTP/seed_sf
IPR039265DIR1-like
IPR016140Bifunc_inhib/LTP/seed_store
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006508 proteolysis
biological_process GO:0009627 systemic acquired resistance
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005504 fatty acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G166680.1Cla97C09G166680.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 27..103
e-value: 1.6E-10
score: 42.6
NoneNo IPR availablePANTHERPTHR33122:SF15B PROTEIN LIKE PROTEIN-RELATEDcoord: 7..103
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 7.0
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 22..99
e-value: 3.0E-8
score: 33.6
IPR039265Putative lipid-transfer protein DIR1-likePANTHERPTHR33122FAMILY NOT NAMEDcoord: 7..103
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILYSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 38..103

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla97C09G166680Cla97C10G195360Watermelon (97103) v2wmbwmbB059