Cla97C09G166680 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTAAATTTTTTTCTTGCATCCTGATCTCTACATCTTTCAAGTTGTTTTTGTGTTGAAGACGGTTGGAATGTCTTGAATCTGATATTGCTTTATGTTTTCTGTTCATCTTTGATTGTTGATTTCTTAACAAAGATTCATGAGAAACTTGGTTTTGTTTTTGGGTTTCTATTGCAGGTTTCTAG ATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTTTCTAG ATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTTTCTAG MKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLCCNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPCF
BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_008461263.1 (PREDICTED: protein LIM1-like [Cucumis melo]) HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45 Identity = 90/104 (86.54%), Postives = 99/104 (95.19%), Query Frame = 0
BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_004135913.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus] >KGN45155.1 hypothetical protein Csa_7G428920 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 2.0e-45 Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0
BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_023514059.1 (putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.6 bits (444), Expect = 8.6e-41 Identity = 80/104 (76.92%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_023004704.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima]) HSP 1 Score: 173.3 bits (438), Expect = 4.2e-40 Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of Cla97C09G166680 vs. NCBI nr
Match: XP_002263374.1 (PREDICTED: protein LIM1 [Vitis vinifera]) HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28 Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|A0A1S3CEQ8|A0A1S3CEQ8_CUCME (protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 7.6e-46 Identity = 90/104 (86.54%), Postives = 99/104 (95.19%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|A0A0A0K635|A0A0A0K635_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45 Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|A5AEY0|A5AEY0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_043972 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.2e-28 Identity = 59/103 (57.28%), Postives = 77/103 (74.76%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|V4SWN4|V4SWN4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27 Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TrEMBL
Match: tr|V4VI71|V4VI71_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033078mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.6e-27 Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TAIR10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 105.5 bits (262), Expect = 2.0e-23 Identity = 42/74 (56.76%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TAIR10
Match: AT3G07450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 100.9 bits (250), Expect = 4.9e-22 Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of Cla97C09G166680 vs. TAIR10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 57.4 bits (137), Expect = 6.2e-09 Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |