Cla97C09G166320 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C09G166320
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	PsaB RNA-binding protein
Location	Cla97Chr09 : 3437299 .. 3439953 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCTTAAGCTTCAACCCCACCAGAATAAGAACCCTAGGTGGGCTTCATTTTCGCAAATCCAAACCTAGTTTGTCGCCATTTTCACAATCGATCAAAACCGCAAACAGCTTCTCAGCCAGTGGCCGTATCAATCAGCAACCACTACGTCGTTTTCGATCAAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGCGGAATTGAACGAGGATGTGGATGACCCGACCTTGGAGTTGGCATATTTGGATTCGGAAACCGATCCGGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCCAGACCTATATTGGACATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCCTGTGATAATTCGCTCTCGCTTCAATACACGAAGTATTTTCCTAACAATGTCATTAATAGCATTACTTTGAGAGACGCGATTTCCTCAATTACTGAAGAGTTGGGGGTACCATTACCAGAGAAAATCCGCTTCTTCAGGTACCTAAAATACAATTATTGTGTTTATGCATCTGAACTTCAAAATATGCCTGAAATTGTGGACCAAATCTACTATTATTGAGTTGTTTTAGCAAATTGTTGAAGAATGGTGTCTTCATATGATTGAAATGTTGATGGGATTATAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGGTTGGTAATAATGAATTTATAGGTGTTTTCTTCGATTCTGTTTCTTTGTGAAGTTGACTGGATTTAGGTTATGAATTACTCTTTCTGTGCTCAAGAGTTTCCATTGTTCCCACCAGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTATACGCGTCATCCAGGTTTTCAGAAAGGATCTAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTTCCAGAGAACCTTTTCGGGGAGAGGTGGGCATTTGTCCAATTGCCCTTTTCAGGTATACCAATAGTTTTTCTTTCTTTGCTTTACATGGACTCTAAACATGGCTGAAGAGTTGTTGCTTTGCCTTACGAAGGGATGTTGCTTTGGTGTTCTTACAGTTTCCCCTATAATTACTTGGTCTTCCATTAATTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGAAACGTTCATGTTTGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGATGAGACAATGATCCCAGGGTTGTCTGTTGCAACTTCACGGGCTCAACCATTGGCAGGTATGCCACAGCAAATTCCTTCATCTCTCTAATTTTGATCTTCCCAGTCTACTAAATTGTTCTTCCCAAAGATTTTATGTGCCCCTACCATGGTAGAATAATATAGAATAATATAATTGGTCAATTACAAGTTTATTTCATAAATTGGAACGTTGGTCCCTAATAGATCTTTGAAATTAAATAAAAATAATAATAAAATAATACAAATGTAATAAAAATAAAGGACATATTCTTTTAATATCTTGTGTCGAATACCTCCTAAATTGTAAAAGTGCATGTCTAAAATCTCTGAGTTTTCAATTTTGTACAGAACATACTCAACGTTCAAATTTATTAGATATAAAATATGAGTCTTCTTTTAATCTTGTGTCCAATAAATTTGCAAAATTTTAAAAGATGTTAAGGTCAATAATTACAGGACAAAGTTGAAAATTAAGAGACCTGATCAACACAAAAGTTAAAAGCTAAGAAGCATGGATACGGATATAAGATACGAATACAACACAAACATGGCGACACAATCATTTTTTAAAAGTCTAGGACATGGCAAGGACATGTTTATTAAAATATATATTTATTAAAAAAAATATATATCATTTTTATACCATAAGAAAATATAAAGGTAAATGGGTTGATGCATTTATATGGTTAAATAATTAGTTTGATGTATTTTACCCTAGAAAATTTATCATTATTGTCATATATGTCTTTTTAGTCTACTTAACTAGTGCTCTATGCATATCTAACGCATCTACTACAGTAAAAAGTGTCTAGTACGTCTCCAACAAGTGTCGGAGTGTCGGAGTGTTCAATACAGACACGAACACGCTAACCAAACTAAAGTGTTCGTGATTCTTAGGTTAAAAGTTTATGGATTTGGTAGTTAATTTAAAATCATTGATTGATTGGATACAAACTTTAATAAGGTTGGAATTCAACTTGTGATTTAACCTAAATAATTTTATAAAGACATCTCATCCATCTCTAACATTTTGTGATGTAAGAAATATCACTCTGCCGTTTCATACATGTTCCCCAAACAATACTTTGCAGCATGATGGTTGATGGCTATAAAACAATCTACCATCTGATTTCTTTTTGCGATTCCACAGCTTGGATAAATGGAATGGAAGTATATTCAGTCGAAGCCGATACGTCTCGTGCTTGTTTGATTCTATCCGTGGGGATCGCAACTCGATATGTCTACGCTACCTATAAAAAAACGCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCCAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATTCAAGACGACTTGGATTCAGAAGACTGTGTTGGATTCTGGCTTCTACTAGACTTGCCGCCGCCGCCAGTATAA

mRNA sequence

ATGGCGACCTTAAGCTTCAACCCCACCAGAATAAGAACCCTAGGTGGGCTTCATTTTCGCAAATCCAAACCTAGTTTGTCGCCATTTTCACAATCGATCAAAACCGCAAACAGCTTCTCAGCCAGTGGCCGTATCAATCAGCAACCACTACGTCGTTTTCGATCAAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGCGGAATTGAACGAGGATGTGGATGACCCGACCTTGGAGTTGGCATATTTGGATTCGGAAACCGATCCGGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCCAGACCTATATTGGACATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCCTGTGATAATTCGCTCTCGCTTCAATACACGAAGTATTTTCCTAACAATGTCATTAATAGCATTACTTTGAGAGACGCGATTTCCTCAATTACTGAAGAGTTGGGGGTACCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTATACGCGTCATCCAGGTTTTCAGAAAGGATCTAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTTCCAGAGAACCTTTTCGGGGAGAGGTGGGCATTTGTCCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGAAACGTTCATGTTTGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGATGAGACAATGATCCCAGGGTTGTCTGTTGCAACTTCACGGGCTCAACCATTGGCAGCTTGGATAAATGGAATGGAAGTATATTCAGTCGAAGCCGATACGTCTCGTGCTTGTTTGATTCTATCCGTGGGGATCGCAACTCGATATGTCTACGCTACCTATAAAAAAACGCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCCAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATTCAAGACGACTTGGATTCAGAAGACTGTGTTGGATTCTGGCTTCTACTAGACTTGCCGCCGCCGCCAGTATAA

Coding sequence (CDS)

ATGGCGACCTTAAGCTTCAACCCCACCAGAATAAGAACCCTAGGTGGGCTTCATTTTCGCAAATCCAAACCTAGTTTGTCGCCATTTTCACAATCGATCAAAACCGCAAACAGCTTCTCAGCCAGTGGCCGTATCAATCAGCAACCACTACGTCGTTTTCGATCAAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGCGGAATTGAACGAGGATGTGGATGACCCGACCTTGGAGTTGGCATATTTGGATTCGGAAACCGATCCGGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCCAGACCTATATTGGACATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCCTGTGATAATTCGCTCTCGCTTCAATACACGAAGTATTTTCCTAACAATGTCATTAATAGCATTACTTTGAGAGACGCGATTTCCTCAATTACTGAAGAGTTGGGGGTACCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTATACGCGTCATCCAGGTTTTCAGAAAGGATCTAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTTCCAGAGAACCTTTTCGGGGAGAGGTGGGCATTTGTCCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGAAACGTTCATGTTTGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGATGAGACAATGATCCCAGGGTTGTCTGTTGCAACTTCACGGGCTCAACCATTGGCAGCTTGGATAAATGGAATGGAAGTATATTCAGTCGAAGCCGATACGTCTCGTGCTTGTTTGATTCTATCCGTGGGGATCGCAACTCGATATGTCTACGCTACCTATAAAAAAACGCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCCAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATTCAAGACGACTTGGATTCAGAAGACTGTGTTGGATTCTGGCTTCTACTAGACTTGCCGCCGCCGCCAGTATAA

Protein sequence

MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Homology

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BLAST of Cla97C09G166320 vs. NCBI nr
Match: XP_008461309.1 (PREDICTED: uncharacterized protein LOC103499936 [Cucumis melo])

HSP 1 Score: 729.6 bits (1882), Expect = 5.6e-207
Identity = 362/379 (95.51%), Postives = 370/379 (97.63%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATLSFNPTRIRTL GLHF KSKP  SPFSQSIKTAN FSA+GRI+QQPLRRF+SNSVSE
Sbjct: 1   MATLSFNPTRIRTLVGLHFTKSKPISSPFSQSIKTANRFSANGRISQQPLRRFQSNSVSE 60

Query: 61  SSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSVSVPEE ELNED DDPTLE+AYLDSETDPESITEWELDFCSRPILDIRGKKVWELV C
Sbjct: 61  SSVSVPEEVELNEDEDDPTLEMAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVVC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAISSIAEELGVPLPEKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME 300
           QLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+IDD+TMIPGLSVATSRAQPLAAW+NGME
Sbjct: 241 QLPFSAVQEEISNLKETFMFGSSLDLDLLGIDIDDKTMIPGLSVATSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 379

[Close]

BLAST of Cla97C09G166320 vs. NCBI nr
Match: XP_004135937.1 (PREDICTED: uncharacterized protein LOC101208052 [Cucumis sativus] >KGN45119.1 hypothetical protein Csa_7G427090 [Cucumis sativus])

HSP 1 Score: 723.8 bits (1867), Expect = 3.1e-205
Identity = 358/379 (94.46%), Postives = 368/379 (97.10%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATLSFNPTRIRTLGGLHF KSKP  SPFSQSIKTAN FSA+GRI+QQPL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTLGGLHFTKSKPIYSPFSQSIKTANRFSANGRISQQPLPRFRSNSVSE 60

Query: 61  SSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSV+ PEE ELNED DDPTLE+AYLDSETDPESITEWELDFCSRPILDIRGKKVWELV C
Sbjct: 61  SSVTAPEEVELNEDEDDPTLEMAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVVC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDA+SSI EELGVPLP+KIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAVSSIAEELGVPLPDKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME 300
           QLPFSAVQEE+SNLKETFMFGSSLDLDLLGIEIDD+TMIPGLSVATSRAQPLAAW+NGME
Sbjct: 241 QLPFSAVQEEISNLKETFMFGSSLDLDLLGIEIDDKTMIPGLSVATSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSRA LILSVGIATRYVYATYKKTPVT+AEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRASLILSVGIATRYVYATYKKTPVTSAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 379

[Close]

BLAST of Cla97C09G166320 vs. NCBI nr
Match: XP_023004563.1 (protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 686.8 bits (1771), Expect = 4.2e-194
Identity = 346/383 (90.34%), Postives = 354/383 (92.43%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATLSFNPTRIRT GGLH  K KP   PF QSIKTA  FSA  RINQQ L RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFPQSIKTAKRFSADFRINQQLLHRFRSNSVSE 60

Query: 61  SSVSVPEEAELNEDV----DDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120
           SS+SVPEE           DDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE
Sbjct: 61  SSISVPEEXXXXXXXXXAEDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120

Query: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180
           LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC
Sbjct: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180

Query: 181 TELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGER 240
           TELG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGER
Sbjct: 181 TELGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGER 240

Query: 241 WAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWI 300
           WAFVQLPFSAVQEEVSNL  +FMFGSSLDLDLLGIEIDD +MIPGLSVA+SRAQPLAAW+
Sbjct: 241 WAFVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNSMIPGLSVASSRAQPLAAWM 300

Query: 301 NGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAI 360
           NGMEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAI
Sbjct: 301 NGMEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAI 360

Query: 361 QDDLDSEDCVGFWLLLDLPPPPV 380
           QDDLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 QDDLDSEDCVGFWLLLDLPPPPV 383

[Close]

BLAST of Cla97C09G166320 vs. NCBI nr
Match: XP_022145109.1 (protein TAB2 homolog, chloroplastic [Momordica charantia])

HSP 1 Score: 671.8 bits (1732), Expect = 1.4e-189
Identity = 339/379 (89.45%), Postives = 350/379 (92.35%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATLSFNP RIRT   LH RK  PS SP SQ IKTAN F  + RINQQ LRRF SNSVSE
Sbjct: 1   MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSE 60

Query: 61  SSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSVS PEE E+     DPTLELAYLD +TD ESITEWELDFCSRPILDIRGKKVWELVAC
Sbjct: 61  SSVSAPEEVEVXXXXXDPTLELAYLDPDTDTESITEWELDFCSRPILDIRGKKVWELVAC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEKIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME 300
           QLPFS VQEEVSNLK TFMFGSSLDLDLLGIEID++TMIPGLSVA+SRAQPLAAW+NGME
Sbjct: 241 QLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSR+ LILSVGI+TRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 378

[Close]

BLAST of Cla97C09G166320 vs. NCBI nr
Match: XP_022959769.1 (protein TAB2 homolog, chloroplastic [Cucurbita moschata])

HSP 1 Score: 661.4 bits (1705), Expect = 1.9e-186
Identity = 336/381 (88.19%), Postives = 342/381 (89.76%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSV-- 60
           MATLSFNPTRIRT GGLH  K KP   PFSQSIKT   FSA  RINQQ LRRFRSNSV  
Sbjct: 1   MATLSFNPTRIRTPGGLHLCKPKPRSLPFSQSIKTPKRFSADFRINQQLLRRFRSNSVXX 60

Query: 61  SESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
                               TLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
           ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE
Sbjct: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           LG+KPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELP+NLFGERWA
Sbjct: 181 LGVKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPDNLFGERWA 240

Query: 241 FVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING 300
           FVQLPFSAVQEEVSNL  +FMFGSSLDLDLLGIEIDD TMIPGLSVA+SRAQPLAAW+NG
Sbjct: 241 FVQLPFSAVQEEVSNLNASFMFGSSLDLDLLGIEIDDNTMIPGLSVASSRAQPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           MEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQD
Sbjct: 301 MEVYSVEADTSRACLILSVGISTRYVYATYKKNPVTTAEAEAWEAAKKACGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDSEDCVGFWLLLDLPPPPV
Sbjct: 361 DLDSEDCVGFWLLLDLPPPPV 381

[Close]

BLAST of Cla97C09G166320 vs. TrEMBL
Match: tr|A0A1S3CEE7|A0A1S3CEE7_CUCME (uncharacterized protein LOC103499936 OS=Cucumis melo OX=3656 GN=LOC103499936 PE=4 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 3.7e-207
Identity = 362/379 (95.51%), Postives = 370/379 (97.63%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATLSFNPTRIRTL GLHF KSKP  SPFSQSIKTAN FSA+GRI+QQPLRRF+SNSVSE
Sbjct: 1   MATLSFNPTRIRTLVGLHFTKSKPISSPFSQSIKTANRFSANGRISQQPLRRFQSNSVSE 60

Query: 61  SSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSVSVPEE ELNED DDPTLE+AYLDSETDPESITEWELDFCSRPILDIRGKKVWELV C
Sbjct: 61  SSVSVPEEVELNEDEDDPTLEMAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVVC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAISSIAEELGVPLPEKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME 300
           QLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+IDD+TMIPGLSVATSRAQPLAAW+NGME
Sbjct: 241 QLPFSAVQEEISNLKETFMFGSSLDLDLLGIDIDDKTMIPGLSVATSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 379

[Close]

BLAST of Cla97C09G166320 vs. TrEMBL
Match: tr|A0A0A0K8A7|A0A0A0K8A7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G427090 PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 2.0e-205
Identity = 358/379 (94.46%), Postives = 368/379 (97.10%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATLSFNPTRIRTLGGLHF KSKP  SPFSQSIKTAN FSA+GRI+QQPL RFRSNSVSE
Sbjct: 1   MATLSFNPTRIRTLGGLHFTKSKPIYSPFSQSIKTANRFSANGRISQQPLPRFRSNSVSE 60

Query: 61  SSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVAC 120
           SSV+ PEE ELNED DDPTLE+AYLDSETDPESITEWELDFCSRPILDIRGKKVWELV C
Sbjct: 61  SSVTAPEEVELNEDEDDPTLEMAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVVC 120

Query: 121 DNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG 180
           DNSLSLQYTKYFPNNVINSITLRDA+SSI EELGVPLP+KIRFFRSQMQTIITKACTELG
Sbjct: 121 DNSLSLQYTKYFPNNVINSITLRDAVSSIAEELGVPLPDKIRFFRSQMQTIITKACTELG 180

Query: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240
           IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV
Sbjct: 181 IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFV 240

Query: 241 QLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME 300
           QLPFSAVQEE+SNLKETFMFGSSLDLDLLGIEIDD+TMIPGLSVATSRAQPLAAW+NGME
Sbjct: 241 QLPFSAVQEEISNLKETFMFGSSLDLDLLGIEIDDKTMIPGLSVATSRAQPLAAWMNGME 300

Query: 301 VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDL 360
           VYSVEADTSRA LILSVGIATRYVYATYKKTPVT+AEAEAWEAAKKACGGLHFLAIQDDL
Sbjct: 301 VYSVEADTSRASLILSVGIATRYVYATYKKTPVTSAEAEAWEAAKKACGGLHFLAIQDDL 360

Query: 361 DSEDCVGFWLLLDLPPPPV 380
           DSEDCVGFWLLLDLPPPPV
Sbjct: 361 DSEDCVGFWLLLDLPPPPV 379

[Close]

BLAST of Cla97C09G166320 vs. TrEMBL
Match: tr|A0A1U8MJF2|A0A1U8MJF2_GOSHI (uncharacterized protein LOC107938346 OS=Gossypium hirsutum OX=3635 GN=LOC107938346 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 7.1e-166
Identity = 293/383 (76.50%), Postives = 337/383 (87.99%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQ---SIKTAN-SFSASGRINQQPLRRFRSN 60
           MATLSFN TRI++        S  S  PFS+   S K  N  F    + + Q L RF+ N
Sbjct: 1   MATLSFNSTRIKS-------PSLQSHKPFSKSHFSTKPNNVPFLFPSKTHPQ-LHRFKPN 60

Query: 61  SVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120
           S+SESSVSVPEEA  + + DDPT EL+YLDSETDP S+TEWELDFCSRPILDIRGKK+WE
Sbjct: 61  SISESSVSVPEEAFDDAEEDDPTSELSYLDSETDPSSVTEWELDFCSRPILDIRGKKIWE 120

Query: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180
           LV CD+SLSLQYTKYFPNNVINS+TL+DA+ +I+E+LGVPLPEK+RFFRSQMQTIITK+C
Sbjct: 121 LVVCDSSLSLQYTKYFPNNVINSVTLKDAMETISEDLGVPLPEKVRFFRSQMQTIITKSC 180

Query: 181 TELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGER 240
            ELGIKP+PSKRCLSLLLWLEERYET+Y RHPGFQKGSKPLLALDNPFPMELPENLFGE+
Sbjct: 181 KELGIKPVPSKRCLSLLLWLEERYETIYMRHPGFQKGSKPLLALDNPFPMELPENLFGEK 240

Query: 241 WAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWI 300
           WAFVQLPFSA++EE+S+L E F+FG+ LDLDLLGIE+DD T+IPGL+VA+SRA+PLAAW+
Sbjct: 241 WAFVQLPFSAIREEISSLDERFVFGAGLDLDLLGIEVDDNTLIPGLAVASSRAKPLAAWM 300

Query: 301 NGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAI 360
           NG+EV SVEADTSR+CLILSVGI+TRYVYATYKKTP +T+EAEAWEAAKKACGGLHFLAI
Sbjct: 301 NGLEVCSVEADTSRSCLILSVGISTRYVYATYKKTPTSTSEAEAWEAAKKACGGLHFLAI 360

Query: 361 QDDLDSEDCVGFWLLLDLPPPPV 380
           Q+DLDS+DCVGFWLLLDLPPPP+
Sbjct: 361 QEDLDSDDCVGFWLLLDLPPPPL 375

[Close]

BLAST of Cla97C09G166320 vs. TrEMBL
Match: tr|A0A0D2MZQ3|A0A0D2MZQ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G171600 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 1.6e-165
Identity = 293/383 (76.50%), Postives = 335/383 (87.47%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQ---SIKTAN-SFSASGRINQQPLRRFRSN 60
           MATLSFN TRI++        S  S  PFS+   S K  N  F    + + Q L  F+ N
Sbjct: 21  MATLSFNSTRIKS-------PSLQSHKPFSKSHFSTKPNNVPFLFPSKTHPQ-LHHFKPN 80

Query: 61  SVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWE 120
           S+SESSVSVPEEA  + + DDPT EL+YLDSETDP S+TEWELDFCSRPILDIRGKK+WE
Sbjct: 81  SISESSVSVPEEAFDDAEEDDPTSELSYLDSETDPSSVTEWELDFCSRPILDIRGKKIWE 140

Query: 121 LVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKAC 180
           LV CD+SLSLQYTKYFPNNVINS+TL+DA+ +I+E+LGVPLPEK+RFFRSQMQTIITK+C
Sbjct: 141 LVVCDSSLSLQYTKYFPNNVINSVTLKDAMETISEDLGVPLPEKVRFFRSQMQTIITKSC 200

Query: 181 TELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGER 240
            ELGIKP+PSKRCLSLLLWLEERYET+Y RHPGFQKGSKPLLALDNPFPMELPENLFGE+
Sbjct: 201 KELGIKPVPSKRCLSLLLWLEERYETIYMRHPGFQKGSKPLLALDNPFPMELPENLFGEK 260

Query: 241 WAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWI 300
           WAFVQLPFSA++EE+S+L E F+FG+ LDLDLLGIE+D+ T+IPGL+VA+SRA+PLAAW+
Sbjct: 261 WAFVQLPFSAIREEISSLDERFVFGAGLDLDLLGIEVDENTLIPGLAVASSRAKPLAAWM 320

Query: 301 NGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAI 360
           NG+EV SVEADTSR CLILSVGI+TRYVYATYKKTP TT+EAEAWEAAKKACGGLHFLAI
Sbjct: 321 NGLEVCSVEADTSRGCLILSVGISTRYVYATYKKTPTTTSEAEAWEAAKKACGGLHFLAI 380

Query: 361 QDDLDSEDCVGFWLLLDLPPPPV 380
           Q+DLDS+DCVGFWLLLDLPPPPV
Sbjct: 381 QEDLDSDDCVGFWLLLDLPPPPV 395

[Close]

BLAST of Cla97C09G166320 vs. TrEMBL
Match: tr|A0A067JPT1|A0A067JPT1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25397 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 3.5e-165
Identity = 296/380 (77.89%), Postives = 329/380 (86.58%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATL FNPTRI        +K    ++ FS+S K +                F+ N++S+
Sbjct: 1   MATLIFNPTRIP-------QKPIFKITSFSKSTKISLRCFLKPTKTNHKYHCFQPNTISK 60

Query: 61  SSVSVPEEAEL-NEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVA 120
            SVS  EE E+ N + DDPT E++YLD ETDPESI EWELDFCSRPILDIRGKKVWELV 
Sbjct: 61  LSVSTQEEVEVENYEEDDPTAEMSYLDPETDPESIIEWELDFCSRPILDIRGKKVWELVV 120

Query: 121 CDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTEL 180
           CD+SLSLQYTKYFPNNVINSITL+DAI SI+E+LGVPLPEKIRFFRSQMQTIITKAC EL
Sbjct: 121 CDDSLSLQYTKYFPNNVINSITLKDAILSISEDLGVPLPEKIRFFRSQMQTIITKACKEL 180

Query: 181 GIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAF 240
            IKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAF
Sbjct: 181 DIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGEKWAF 240

Query: 241 VQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGM 300
           VQLPFSAVQ E S+L+ +FMFG+SLDLDLLGIEI D+T+IPGL+VA+SRA+PLAAW+NG+
Sbjct: 241 VQLPFSAVQREASSLETSFMFGASLDLDLLGIEIGDKTLIPGLAVASSRAKPLAAWMNGL 300

Query: 301 EVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDD 360
           EVYS+EADTSRACLILSVGI+TRY+YATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQ+D
Sbjct: 301 EVYSIEADTSRACLILSVGISTRYIYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQED 360

Query: 361 LDSEDCVGFWLLLDLPPPPV 380
           LDSEDCVGFWLLLDLPPPPV
Sbjct: 361 LDSEDCVGFWLLLDLPPPPV 373

[Close]

BLAST of Cla97C09G166320 vs. Swiss-Prot
Match: sp|Q9SFB3|ATAB2_ARATH (Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=2 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 2.3e-156
Identity = 277/381 (72.70%), Postives = 321/381 (84.25%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATL FN  RI+T          P  S F++ IKT + FS+   + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPS----LPRIPKPSSFTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSVSVPEEAELNEDV--DDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+S+ +E E+  +V  DDPT EL+YLD E+D +SI EWELDFCSRPILD RGKK+WELV
Sbjct: 61  SSLSITKEQEVANEVEEDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGKKIWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
            CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC E
Sbjct: 121 VCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTIITKACKE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           L IK +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGE+WA
Sbjct: 181 LAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENLFGEKWA 240

Query: 241 FVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING 300
           FVQLP+SAV+EE+S+  E F+FG+SLDLDLLGIE+D+ T+IPGLSVATSRA+PLAAW+NG
Sbjct: 241 FVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           +EV S+EAD+S+ CLILSVGIATRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQD
Sbjct: 301 LEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 DLDSDDCVGFWLLIDLPPPPV 374

[Close]

BLAST of Cla97C09G166320 vs. Swiss-Prot
Match: sp|B4FTR7|ATAB2_MAIZE (Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 7.9e-136
Identity = 221/313 (70.61%), Postives = 273/313 (87.22%), Query Frame = 0


Query: 67  EEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSL 126
           EE E    V DP  E+ YLD + DPESI EWELDFCSRPILD RGKKVWELV CD +LSL
Sbjct: 79  EEVEAENKV-DPQAEVCYLDPDVDPESIREWELDFCSRPILDARGKKVWELVVCDATLSL 138

Query: 127 QYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPS 186
           Q+T+YFPNN INS+TLRDA++S++E LGVP+P+++RFFRSQMQTIIT+AC +LG+K +PS
Sbjct: 139 QFTRYFPNNAINSVTLRDALASVSEALGVPMPDRVRFFRSQMQTIITRACGDLGVKAVPS 198

Query: 187 KRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSA 246
           +RC+SLLLWLEERYE VY+RHPGFQ G++PLLALDNPFP  LPENLFG++WAFVQLPFSA
Sbjct: 199 RRCVSLLLWLEERYEVVYSRHPGFQAGTRPLLALDNPFPTTLPENLFGDKWAFVQLPFSA 258

Query: 247 VQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGMEVYSVEA 306
           V+EEV +L+  + FG+ LDL+LLG E+DD T++PG++V +SRA+PLAAW+NG+E+ ++EA
Sbjct: 259 VREEVESLERRYAFGAGLDLELLGFELDDTTLVPGVAVESSRAKPLAAWMNGLEICAMEA 318

Query: 307 DTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCV 366
           DT RA LILS G++TRYVY+ Y+KT  +T EAEAWEAAKKACGGLHFLAIQ++L+S+ CV
Sbjct: 319 DTGRASLILSAGVSTRYVYSGYQKTAASTQEAEAWEAAKKACGGLHFLAIQENLNSDGCV 378

Query: 367 GFWLLLDLPPPPV 380
           GFWLLLDLPPPPV
Sbjct: 379 GFWLLLDLPPPPV 390

[Close]

BLAST of Cla97C09G166320 vs. Swiss-Prot
Match: sp|Q6K9C1|ATAB2_ORYSJ (Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0610800 PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 6.9e-124
Identity = 205/303 (67.66%), Postives = 250/303 (82.51%), Query Frame = 0


Query: 77  DPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNV 136
           DP  E+ YLD E D E I EWELDFCSRPI              D +LSLQ+T++FPN  
Sbjct: 90  DPLAEVCYLDPEADAEGIREWELDFCSRPIXXXXXXXXXXXXXXDATLSLQFTRFFPNTS 149

Query: 137 INSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWL 196
           INS+TLRDA++S+   LGVPLP++ RFFRSQMQTII++AC ELG+K +PS+RC+SLLLWL
Sbjct: 150 INSVTLRDALASVATSLGVPLPDRARFFRSQMQTIISRACNELGVKAVPSRRCVSLLLWL 209

Query: 197 EERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKE 256
           EERYETVY+RHPGFQ G+KPLL LDNPFP  LPENLFG++WAFVQLPFSAV+EEV +L+ 
Sbjct: 210 EERYETVYSRHPGFQSGTKPLLTLDNPFPTSLPENLFGDKWAFVQLPFSAVREEVESLER 269

Query: 257 TFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGMEVYSVEADTSRACLILS 316
            + FG+ LDLDLLG E+D+ T+IPG++V +SRA+PLAAW+NG+E+ S+E DT RA LILS
Sbjct: 270 RYAFGAGLDLDLLGFELDENTLIPGVAVESSRAKPLAAWMNGLEICSMEVDTGRANLILS 329

Query: 317 VGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPP 376
            G++TRYVYA Y+K+  TT EAEAWEAAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPP
Sbjct: 330 AGVSTRYVYAGYQKSAATTQEAEAWEAAKKACGGLHFLAIQENLNSDGCVGFWLLLDLPP 389

Query: 377 PPV 380
           PPV
Sbjct: 390 PPV 392

[Close]

BLAST of Cla97C09G166320 vs. TAIR10
Match: AT3G08010.1 (RNA binding)

HSP 1 Score: 553.1 bits (1424), Expect = 1.3e-157
Identity = 277/381 (72.70%), Postives = 321/381 (84.25%), Query Frame = 0


Query: 1   MATLSFNPTRIRTLGGLHFRKSKPSLSPFSQSIKTANSFSASGRINQQPLRRFRSNSVSE 60
           MATL FN  RI+T          P  S F++ IKT + FS+   + +    RF S S+ E
Sbjct: 1   MATLGFNTRRIQTPS----LPRIPKPSSFTKPIKTHHLFSSETLLKR---CRFVSRSLPE 60

Query: 61  SSVSVPEEAELNEDV--DDPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELV 120
           SS+S+ +E E+  +V  DDPT EL+YLD E+D +SI EWELDFCSRPILD RGKK+WELV
Sbjct: 61  SSLSITKEQEVANEVEEDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGKKIWELV 120

Query: 121 ACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTE 180
            CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC E
Sbjct: 121 VCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTIITKACKE 180

Query: 181 LGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWA 240
           L IK +PSKRCLSL LWL+ERY+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGE+WA
Sbjct: 181 LAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENLFGEKWA 240

Query: 241 FVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING 300
           FVQLP+SAV+EE+S+  E F+FG+SLDLDLLGIE+D+ T+IPGLSVATSRA+PLAAW+NG
Sbjct: 241 FVQLPYSAVREEISDFDEKFVFGASLDLDLLGIEVDENTLIPGLSVATSRAKPLAAWMNG 300

Query: 301 MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQD 360
           +EV S+EAD+S+ CLILSVGIATRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQD
Sbjct: 301 LEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKTSGGLHFLAIQD 360

Query: 361 DLDSEDCVGFWLLLDLPPPPV 380
           DLDS+DCVGFWLL+DLPPPPV
Sbjct: 361 DLDSDDCVGFWLLIDLPPPPV 374

The following BLAST results are available for this feature:

BLAST of Cla97C09G166320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461309.1	5.6e-207	95.51	PREDICTED: uncharacterized protein LOC103499936 [Cucumis melo]	[more]
XP_004135937.1	3.1e-205	94.46	PREDICTED: uncharacterized protein LOC101208052 [Cucumis sativus] >KGN45119.1 hy...	[more]
XP_023004563.1	4.2e-194	90.34	protein TAB2 homolog, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_022145109.1	1.4e-189	89.45	protein TAB2 homolog, chloroplastic [Momordica charantia]	[more]
XP_022959769.1	1.9e-186	88.19	protein TAB2 homolog, chloroplastic [Cucurbita moschata]	[more]

BLAST of Cla97C09G166320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CEE7\|A0A1S3CEE7_CUCME	3.7e-207	95.51	uncharacterized protein LOC103499936 OS=Cucumis melo OX=3656 GN=LOC103499936 PE=...	[more]
tr\|A0A0A0K8A7\|A0A0A0K8A7_CUCSA	2.0e-205	94.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G427090 PE=4 SV=1	[more]
tr\|A0A1U8MJF2\|A0A1U8MJF2_GOSHI	7.1e-166	76.50	uncharacterized protein LOC107938346 OS=Gossypium hirsutum OX=3635 GN=LOC1079383...	[more]
tr\|A0A0D2MZQ3\|A0A0D2MZQ3_GOSRA	1.6e-165	76.50	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G171600 PE=4 ...	[more]
tr\|A0A067JPT1\|A0A067JPT1_JATCU	3.5e-165	77.89	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25397 PE=4 SV=1	[more]

BLAST of Cla97C09G166320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SFB3\|ATAB2_ARATH	2.3e-156	72.70	Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATAB2 PE=...	[more]
sp\|B4FTR7\|ATAB2_MAIZE	7.9e-136	70.61	Protein TAB2 homolog, chloroplastic OS=Zea mays OX=4577 GN=TAB2 PE=2 SV=1	[more]
sp\|Q6K9C1\|ATAB2_ORYSJ	6.9e-124	67.66	Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of Cla97C09G166320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G08010.1	1.3e-157	72.70	RNA binding	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009472	Tab2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0008150	biological_process
biological_process	GO:0006412	translation
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0009704	de-etiolation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0016556	mRNA modification
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G166320.1	Cla97C09G166320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009472	Tab2-like	PFAM	PF06485	DUF1092	coord: 97..371 e-value: 5.0E-89 score: 298.3
IPR009472	Tab2-like	PANTHER	PTHR34556	FAMILY NOT NAMED	coord: 41..379
None	No IPR available	PANTHER	PTHR34556:SF2	F17A17.35 PROTEIN	coord: 41..379

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C09G166320	Cla015250	Watermelon (97103) v1	wmwmbB041
Cla97C09G166320	Csa7G427090	Cucumber (Chinese Long) v2	cuwmbB561
Cla97C09G166320	MELO3C023560	Melon (DHL92) v3.5.1	mewmbB211
Cla97C09G166320	ClCG09G004060	Watermelon (Charleston Gray)	wcgwmbB035
Cla97C09G166320	CSPI07G19160	Wild cucumber (PI 183967)	cpiwmbB587
Cla97C09G166320	Cucsa.127960	Cucumber (Gy14) v1	cgywmbB207
Cla97C09G166320	CmaCh08G005210	Cucurbita maxima (Rimu)	cmawmbB934
Cla97C09G166320	CmoCh08G005120	Cucurbita moschata (Rifu)	cmowmbB911
Cla97C09G166320	Lsi02G025640	Bottle gourd (USVL1VR-Ls)	lsiwmbB209
Cla97C09G166320	CsGy7G017510	Cucumber (Gy14) v2	cgybwmbB532
Cla97C09G166320	MELO3C023560.2	Melon (DHL92) v3.6.1	medwmbB195
Cla97C09G166320	Carg13436	Silver-seed gourd	carwmbB0473
Cla97C09G166320	CsaV3_7G030960	Cucumber (Chinese Long) v3	cucwmbB584
Cla97C09G166320	Bhi09G000542	Wax gourd	wgowmbB616

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C09G166320	Watermelon (97103) v2	wmbwmbB059
Cla97C09G166320	Silver-seed gourd	carwmbB0370
Cla97C09G166320	Silver-seed gourd	carwmbB0371
Cla97C09G166320	Silver-seed gourd	carwmbB0475
Cla97C09G166320	Silver-seed gourd	carwmbB0798
Cla97C09G166320	Cucumber (Gy14) v2	cgybwmbB247
Cla97C09G166320	Cucurbita maxima (Rimu)	cmawmbB387
Cla97C09G166320	Cucurbita maxima (Rimu)	cmawmbB391
Cla97C09G166320	Cucurbita maxima (Rimu)	cmawmbB518
Cla97C09G166320	Cucurbita moschata (Rifu)	cmowmbB370
Cla97C09G166320	Cucurbita moschata (Rifu)	cmowmbB374
Cla97C09G166320	Wild cucumber (PI 183967)	cpiwmbB265
Cla97C09G166320	Wild cucumber (PI 183967)	cpiwmbB268
Cla97C09G166320	Cucumber (Chinese Long) v3	cucwmbB259
Cla97C09G166320	Cucumber (Chinese Long) v3	cucwmbB264
Cla97C09G166320	Cucumber (Chinese Long) v2	cuwmbB257
Cla97C09G166320	Bottle gourd (USVL1VR-Ls)	lsiwmbB249
Cla97C09G166320	Melon (DHL92) v3.6.1	medwmbB352
Cla97C09G166320	Watermelon (Charleston Gray)	wcgwmbB054
Cla97C09G166320	Watermelon (97103) v1	wmwmbB073
Cla97C09G166320	Wax gourd	wgowmbB047