Cla97C08G152610 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C08G152610
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	ylmG homolog protein 2, chloroplastic
Location	Cla97Chr08 : 21013737 .. 21015517 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCAGACGAGTCGTCACTTCTAAACCCTAGACGAACTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCCTCATTCTCACCTGCATTTTCTCAAACACCTTCAGGACCATCCAGGAGAAGGCACGCTGAATTCCTCCCTCCATGTAATTTTCTTCGCGACCTCCATGATTCTTTCGCATCAAATACTGAAAGATGCATCAGATTTTTTCACTCATTGGCTTCTGAGAATCCATTTCTCAATAAATTGCTCTCGTTGCATTCTGAGTTCCAGAGTTTCCGTCACCAGGTAACTAACTGCAACTGTAATTTGACGGTTTCGTGAAATTCTGATTCGTGTTTCTAATGCAATTGCTCCGTTTCTTGCACTTCTGGCTGTGTGTACAGTTTGATTTTCAGATAGAATATGACACGCTTCTTCCGGTTAATTTTTTTCCCGGGGGTTTCAATTTTCTAATCTTTGCAGTACTTTGTTTTGAATTCTGTTTCAGGTCCACGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAATTTTGCTGCAGTTTTGCCGGGGGATTCTGTGGCAGGACTTGTAGTCGCTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGACTAGTTTTGACTTGGTTTCCAAACACACCTCCCGCCATTGTTAGTCCACTAAGGTAACTTTTTTATTTGTTTTTGTCTTAAGTATTCAAAGTGAAGAAAGAAGAGAGACGTTTTCATAATGATTGGTTGTGAGCCTGGAATGAGATTTCTGAACTGAATATAGCAGCAAGCTTTTATATCCTTACAGCTTGAAAGAGGGAAATATCTGTAGTGGGTGTTTGGCCAGAGTGATTTAGAAGTTAAAGTTGAAATGTATATTGTTTAAATTCTAAGCTATACTGATCCAACTCACATTCAAATTCACACTACTGATTCACTCATATGTTGTCTTTTGCTGTCTTTTGCTTCAGAAACAGATCTTAAAAACTGCTGTCAAACAAATATTATGGACAAAAAAAAAAGGCCCAAGAAGACTTTTTCTTATATAATAGAAGACAATAATTAGTTTATAAGAGTCTGTTTTTTGCGCTTAATATATACATATATATTTTTAACGTTAAAATACTTTTTAACACTCCATGTTTGAAACGACTTTCTAAATGCTCAAGTATAAACAAAATATTTTTAAGCATTTGATAAGTCACTTAAAGGGAAAAAAAAAACTTTAAAAATCATTTCAAGTCGACTCTAAGTGGGATAACCTCATAGTTATGATACCTCATATCTCATATATCTTTGTATCCACTATCAATTGCCTGCTGTGCTGCTAGCTGATGGGGTGTCTTTATTTTAGTTTGCCTTAGATTAGAAAATATGTAAAAATGAATAATAACAAGAATAAGAAGAATAAGATTTTTGTAATAATATATATAGAGAGAAAGTTACAATGTAAATTTTTGTGCTAATTGTCATGATTTGTTTCTCTCTCAGCACTTTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTAAATGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTCCCAAATTCGTCTCTTGCAAATCCTACTCCTTTAGAAGGCTCTGTTGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGGAAAAAATAATGCCGATGCTGCTCAATAG

mRNA sequence

ATGACTCCAGACGAGTCGTCACTTCTAAACCCTAGACGAACTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCCTCATTCTCACCTGCATTTTCTCAAACACCTTCAGGACCATCCAGGAGAAGGCACGCTGAATTCCTCCCTCCATGTAATTTTCTTCGCGACCTCCATGATTCTTTCGCATCAAATACTGAAAGATGCATCAGATTTTTTCACTCATTGGCTTCTGAGAATCCATTTCTCAATAAATTGCTCTCGTTGCATTCTGAGTTCCAGAGTTTCCGTCACCAGGTCCACGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAATTTTGCTGCAGTTTTGCCGGGGGATTCTGTGGCAGGACTTGTAGTCGCTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGACTAGTTTTGACTTGGTTTCCAAACACACCTCCCGCCATTGTTAGTCCACTAAGCACTTTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTAAATGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTCCCAAATTCGTCTCTTGCAAATCCTACTCCTTTAGAAGGCTCTGTTGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGGAAAAAATAATGCCGATGCTGCTCAATAG

Coding sequence (CDS)

ATGACTCCAGACGAGTCGTCACTTCTAAACCCTAGACGAACTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCCTCATTCTCACCTGCATTTTCTCAAACACCTTCAGGACCATCCAGGAGAAGGCACGCTGAATTCCTCCCTCCATGTAATTTTCTTCGCGACCTCCATGATTCTTTCGCATCAAATACTGAAAGATGCATCAGATTTTTTCACTCATTGGCTTCTGAGAATCCATTTCTCAATAAATTGCTCTCGTTGCATTCTGAGTTCCAGAGTTTCCGTCACCAGGTCCACGGTATGAACTCCAGGAATTTCCGAGCTCTCTCCAGTCACAATTTTGCTGCAGTTTTGCCGGGGGATTCTGTGGCAGGACTTGTAGTCGCTAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGACTAGTTTTGACTTGGTTTCCAAACACACCTCCCGCCATTGTTAGTCCACTAAGCACTTTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTAAATGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTCCCAAATTCGTCTCTTGCAAATCCTACTCCTTTAGAAGGCTCTGTTGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGGAAAAAATAATGCCGATGCTGCTCAATAG

Protein sequence

MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDSFASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLPGDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRRLQGSGKNNADAAQ

Homology

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BLAST of Cla97C08G152610 vs. NCBI nr
Match: XP_008445540.1 (PREDICTED: ylmG homolog protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 455.7 bits (1171), Expect = 1.0e-124
Identity = 231/253 (91.30%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           MTP ESSL NP+RTSTAFNFFPNCISSFSPAFSQTPSGPSRRR  EF  PCNFLRDLH+S
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
           FAS TE CIR FHS ASENPFL+KLLSL SEFQSFR Q+H MNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLANP PLEGSVDLT+SQKKWMRR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSGKNNADAAQ 254
           LQGSGKNNADA Q
Sbjct: 241 LQGSGKNNADADQ 253

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BLAST of Cla97C08G152610 vs. NCBI nr
Match: XP_004144214.1 (PREDICTED: uncharacterized protein LOC101210772 [Cucumis sativus] >KGN47583.1 hypothetical protein Csa_6G362410 [Cucumis sativus])

HSP 1 Score: 447.6 bits (1150), Expect = 2.8e-122
Identity = 225/253 (88.93%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           MTP +SSL NP++TSTAFNFFPNCISSFSPAFSQTPSGPSRRR  EF PPCNFLR LH+S
Sbjct: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
           FAS TE CIR FHSLASENPFL+KLLSL SEF  FR+Q+HGMNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLANP PL+GSVDLT+SQKKWM+R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240

Query: 241 LQGSGKNNADAAQ 254
           LQGS KNNADA+Q
Sbjct: 241 LQGSEKNNADASQ 253

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BLAST of Cla97C08G152610 vs. NCBI nr
Match: XP_022961827.1 (ylmG homolog protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 441.8 bits (1135), Expect = 1.6e-120
Identity = 219/253 (86.56%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           MTPDESS+LNPRR+STAF+FFPNCISSFSPAFSQTP G SRRRH +F+PPC FLRDLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
           FA   E+CI FFHSLASENPFLNKL+SL SE QSF HQ+HG+NSRNFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGLNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLAN TP +GS DLT+SQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTSSQKKWIRR 240

Query: 241 LQGSGKNNADAAQ 254
           LQGSG+N AD+A+
Sbjct: 241 LQGSGENKADSAR 253

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BLAST of Cla97C08G152610 vs. NCBI nr
Match: XP_022997245.1 (ylmG homolog protein 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 439.1 bits (1128), Expect = 1.0e-119
Identity = 219/250 (87.60%), Postives = 234/250 (93.60%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           MTPDESS+LNPRR+STAF+FFPNCISSFSPAFSQTP G SRRRH +F PP  FLRDLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGGSRRRHVDFFPPRKFLRDLHES 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
           FAS  E+CI FFHSLASENPFL+KL+SL SEFQSF HQ+HGMNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTAEKCIVFFHSLASENPFLDKLMSLSSEFQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAG++V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGILVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLAN TP +GS DLTTSQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQGSGKNNAD 251
           LQGSG+N AD
Sbjct: 241 LQGSGENKAD 250

[Close]

BLAST of Cla97C08G152610 vs. NCBI nr
Match: XP_023547092.1 (ylmG homolog protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.0 bits (1125), Expect = 2.2e-119
Identity = 219/253 (86.56%), Postives = 235/253 (92.89%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           MTPDESS+LNPRR+STAF+F PNCISSFSPAFSQTP G SRRRH +F+PPC FLRDLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
           FAS  E+CI FFHSLASENPFLNKL+SL SE QSF HQ+HGMNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSS AN TP +GS DLTTSQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQGSGKNNADAAQ 254
           LQGS +N AD+A+
Sbjct: 241 LQGSVENKADSAR 253

[Close]

BLAST of Cla97C08G152610 vs. TrEMBL
Match: tr|A0A1S3BDU1|A0A1S3BDU1_CUCME (ylmG homolog protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488523 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 6.9e-125
Identity = 231/253 (91.30%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           MTP ESSL NP+RTSTAFNFFPNCISSFSPAFSQTPSGPSRRR  EF  PCNFLRDLH+S
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
           FAS TE CIR FHS ASENPFL+KLLSL SEFQSFR Q+H MNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLANP PLEGSVDLT+SQKKWMRR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSGKNNADAAQ 254
           LQGSGKNNADA Q
Sbjct: 241 LQGSGKNNADADQ 253

[Close]

BLAST of Cla97C08G152610 vs. TrEMBL
Match: tr|A0A0A0KDJ4|A0A0A0KDJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G362410 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.9e-122
Identity = 225/253 (88.93%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           MTP +SSL NP++TSTAFNFFPNCISSFSPAFSQTPSGPSRRR  EF PPCNFLR LH+S
Sbjct: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
           FAS TE CIR FHSLASENPFL+KLLSL SEF  FR+Q+HGMNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLANP PL+GSVDLT+SQKKWM+R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240

Query: 241 LQGSGKNNADAAQ 254
           LQGS KNNADA+Q
Sbjct: 241 LQGSEKNNADASQ 253

[Close]

BLAST of Cla97C08G152610 vs. TrEMBL
Match: tr|A0A2I4E3R1|A0A2I4E3R1_9ROSI (ylmG homolog protein 2, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108985993 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70
Identity = 144/230 (62.61%), Postives = 172/230 (74.78%), Query Frame = 0


Query: 29  SPAFSQTPSGPSRRRHAEFLPPCNF------LRDLHDSFASNTERCIRFFHSLASENPFL 88
           +P    + SGP+   ++ + P  +F      LRDL  S  S  ++C RF    AS+NP L
Sbjct: 35  TPFLRPSSSGPNSNSNSNYKPSSHFVRPSVLLRDLRCSVMSTADKCFRFLLLFASQNPLL 94

Query: 89  NKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLPGDSVAGLVVANGIQNFLSLYNT 148
           NK+LSL S+FQ F  Q++  N RN  +L +HNFAAVLPGDSVAG+VVANGI NFL++YNT
Sbjct: 95  NKVLSLSSQFQGFCQQINCRNYRNVNSLYNHNFAAVLPGDSVAGIVVANGISNFLNIYNT 154

Query: 149 LLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTS 208
           LL+VRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLD SPILAFLVLNAFTS
Sbjct: 155 LLIVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDFSPILAFLVLNAFTS 214

Query: 209 TAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRRLQGSGKNNADAA 253
           TAAALPAELP   +S  +P  L+   ++TTSQKKWMRRL G+   ++  A
Sbjct: 215 TAAALPAELPATGTSEESPVSLDKFTNITTSQKKWMRRLHGNRSKSSGGA 264

[Close]

BLAST of Cla97C08G152610 vs. TrEMBL
Match: tr|A0A2I4GST6|A0A2I4GST6_9ROSI (ylmG homolog protein 2, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109010541 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.4e-69
Identity = 145/242 (59.92%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 11  PRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDSFASNTERCIR 70
           P R   ++  F        P+ S   S  + +  + F+ P   LRDL  S  S  ++C R
Sbjct: 21  PNRVILSWWAFTTQTPFLRPSNSGLNSNSNYKPSSHFVRPSVLLRDLRCSVMSTADKCFR 80

Query: 71  FFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLPGDSVAGLVVA 130
           F    AS+NP LNK+LSL S+FQ F  Q++  N RN  +L +HNFAAVLPGDSVAG+VVA
Sbjct: 81  FLLLFASQNPLLNKVLSLSSQFQGFCQQINCRNYRNVNSLYNHNFAAVLPGDSVAGIVVA 140

Query: 131 NGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSP 190
           NGI NFL++YNTLL+VRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLD SP
Sbjct: 141 NGISNFLNIYNTLLIVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDFSP 200

Query: 191 ILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRRLQGSGKNNAD 250
           ILAFLVLNAFTSTAAALPAELP   +   +P  L+   ++TTSQKKWMRRL G+   ++ 
Sbjct: 201 ILAFLVLNAFTSTAAALPAELPATGTPEESPVSLDKFTNITTSQKKWMRRLHGNRSKSSG 260

Query: 251 AA 253
            A
Sbjct: 261 GA 262

[Close]

BLAST of Cla97C08G152610 vs. TrEMBL
Match: tr|A0A251RAJ7|A0A251RAJ7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G403800 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.4e-69
Identity = 154/250 (61.60%), Postives = 178/250 (71.20%), Query Frame = 0


Query: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRHAEFLPPCNFLRDLHDS 60
           M   ES+         A NF PNC    +   S T   P  R  +    P   L D+  S
Sbjct: 1   MAHSESASATETPKPLASNFTPNC----AMLLSSTNFAPFLRA-SPLKKPNLVLPDIPAS 60

Query: 61  FASNTERCIRFFHSLASENPFLNKLLSLHSEFQSFRHQVHGMNSRNFRALSSHNFAAVLP 120
            AS T++C++  HSLAS+NPFL+KLLSL SEFQS  HQ+     R    LS+HNFAAVLP
Sbjct: 61  IASATDKCLQLLHSLASQNPFLSKLLSLRSEFQSLCHQIRCRKHRQVETLSAHNFAAVLP 120

Query: 121 GDSVAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAGLVVANGI NFL+LYNTLLVVRLVLTWFPN+PPAIV PLST+CDPYLNIFRG+IP
Sbjct: 121 GDSVAGLVVANGISNFLNLYNTLLVVRLVLTWFPNSPPAIVGPLSTICDPYLNIFRGLIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSL-ANPTPLEGSVDLTTSQKKWMR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP  +  + A+P    G  +L+TSQKKWM 
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPASSQQVTASPA---GITNLSTSQKKWMT 240

Query: 241 RLQGSGKNNA 250
           RLQG+   ++
Sbjct: 241 RLQGNNTKSS 242

[Close]

BLAST of Cla97C08G152610 vs. Swiss-Prot
Match: sp|Q9C595|YLMG2_ARATH (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.5e-58
Identity = 128/224 (57.14%), Postives = 154/224 (68.75%), Query Frame = 0


Query: 22  PNCISSFSPAFSQTPSGPSRRRHAEFLPP----CNFLRDLHDSFASNTERCIRFFHSLAS 81
           PN   S S AF+QTP   S + +   LPP       ++D H S  S TE+   F HSLAS
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLNKLLSLHSEFQSFRHQVHGMNSRNFR-ALSSHNFAAVLPGDSVAGLVVANGIQNF 141
           +NP   + + L SEF     ++   N+   R A+S+H FAAVLPGDSVAGLVVANG+ NF
Sbjct: 82  KNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINF 141

Query: 142 LSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 201
           L++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLV
Sbjct: 142 LNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLV 201

Query: 202 LNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 241
           LNAFTS+A ALP ELP            +G+V   +S+ KW+RR
Sbjct: 202 LNAFTSSAMALPCELP----------SADGAVSPASSETKWVRR 234

[Close]

BLAST of Cla97C08G152610 vs. Swiss-Prot
Match: sp|Q9SRS3|YMG11_ARATH (YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA GI+ +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]

BLAST of Cla97C08G152610 vs. Swiss-Prot
Match: sp|Q9SUE0|YMG12_ARATH (YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.6e-14
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA G+  +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 195 LDVSPLLAFAVLGTLGS 211

[Close]

BLAST of Cla97C08G152610 vs. Swiss-Prot
Match: sp|O78424|YCF19_GUITH (Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-08
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 136 FLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILA 195
           FL +Y  LL++R+ LTWFPN          LS + DPYL +FRGI+PPL G +D+SPIL 
Sbjct: 15  FLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG-IDISPILG 74

Query: 196 FLVL 198
           F++L
Sbjct: 75  FILL 77

[Close]

BLAST of Cla97C08G152610 vs. Swiss-Prot
Match: sp|O31729|YLMG_BACSU (Uncharacterized membrane protein YlmG OS=Bacillus subtilis (strain 168) OX=224308 GN=ylmG PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 27/67 (40.30%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 137 LSLYNTLLVVRLVLTWFPNTPPAIVSP-LSTLCDPYLNIFRGIIPPLGGTLDLSPILAFL 196
           +++Y+  L++ + ++W P+T    V   L+++C+PYL  FR IIPP+   LD+SPI+A L
Sbjct: 14  ITIYSFALIIYIFMSWVPSTRETAVGRFLASICEPYLEPFRKIIPPI-AMLDISPIVAIL 73

Query: 197 VLNAFTS 203
           VL   T+
Sbjct: 74  VLRFATT 79

[Close]

BLAST of Cla97C08G152610 vs. TAIR10
Match: AT5G21920.1 (YGGT family protein)

HSP 1 Score: 225.3 bits (573), Expect = 4.2e-59
Identity = 128/224 (57.14%), Postives = 154/224 (68.75%), Query Frame = 0


Query: 22  PNCISSFSPAFSQTPSGPSRRRHAEFLPP----CNFLRDLHDSFASNTERCIRFFHSLAS 81
           PN   S S AF+QTP   S + +   LPP       ++D H S  S TE+   F HSLAS
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLNKLLSLHSEFQSFRHQVHGMNSRNFR-ALSSHNFAAVLPGDSVAGLVVANGIQNF 141
           +NP   + + L SEF     ++   N+   R A+S+H FAAVLPGDSVAGLVVANG+ NF
Sbjct: 82  KNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINF 141

Query: 142 LSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 201
           L++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLV
Sbjct: 142 LNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLV 201

Query: 202 LNAFTSTAAALPAELPVPNSSLANPTPLEGSVDLTTSQKKWMRR 241
           LNAFTS+A ALP ELP            +G+V   +S+ KW+RR
Sbjct: 202 LNAFTSSAMALPCELP----------SADGAVSPASSETKWVRR 234

[Close]

BLAST of Cla97C08G152610 vs. TAIR10
Match: AT3G07430.1 (YGGT family protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA GI+ +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]

BLAST of Cla97C08G152610 vs. TAIR10
Match: AT4G27990.1 (YGGT family protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.7e-15
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA G+  +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 195 LDVSPLLAFAVLGTLGS 211

The following BLAST results are available for this feature:

BLAST of Cla97C08G152610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445540.1	1.0e-124	91.30	PREDICTED: ylmG homolog protein 2, chloroplastic [Cucumis melo]	[more]
XP_004144214.1	2.8e-122	88.93	PREDICTED: uncharacterized protein LOC101210772 [Cucumis sativus] >KGN47583.1 hy...	[more]
XP_022961827.1	1.6e-120	86.56	ylmG homolog protein 2, chloroplastic [Cucurbita moschata]	[more]
XP_022997245.1	1.0e-119	87.60	ylmG homolog protein 2, chloroplastic [Cucurbita maxima]	[more]
XP_023547092.1	2.2e-119	86.56	ylmG homolog protein 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C08G152610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDU1\|A0A1S3BDU1_CUCME	6.9e-125	91.30	ylmG homolog protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488523 PE...	[more]
tr\|A0A0A0KDJ4\|A0A0A0KDJ4_CUCSA	1.9e-122	88.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G362410 PE=4 SV=1	[more]
tr\|A0A2I4E3R1\|A0A2I4E3R1_9ROSI	1.3e-70	62.61	ylmG homolog protein 2, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC10898...	[more]
tr\|A0A2I4GST6\|A0A2I4GST6_9ROSI	1.4e-69	59.92	ylmG homolog protein 2, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC10901...	[more]
tr\|A0A251RAJ7\|A0A251RAJ7_PRUPE	1.4e-69	61.60	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G403800 PE=4 SV=1	[more]

BLAST of Cla97C08G152610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C595\|YLMG2_ARATH	7.5e-58	57.14	YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 P...	[more]
sp\|Q9SRS3\|YMG11_ARATH	3.0e-14	53.25	YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1...	[more]
sp\|Q9SUE0\|YMG12_ARATH	6.6e-14	51.95	YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1...	[more]
sp\|O78424\|YCF19_GUITH	3.2e-08	51.56	Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1	[more]
sp\|O31729\|YLMG_BACSU	1.1e-05	40.30	Uncharacterized membrane protein YlmG OS=Bacillus subtilis (strain 168) OX=22430...	[more]

BLAST of Cla97C08G152610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21920.1	4.2e-59	57.14	YGGT family protein	[more]
AT3G07430.1	1.7e-15	53.25	YGGT family protein	[more]
AT4G27990.1	3.7e-15	51.95	YGGT family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR003425	CCB3/YggT

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0090143	nucleoid organization
cellular_component	GO:0016020	membrane
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G152610.1	Cla97C08G152610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003425	CCB3/YggT	PFAM	PF02325	YGGT	coord: 136..199 e-value: 1.6E-15 score: 57.2
IPR003425	CCB3/YggT	PANTHER	PTHR33219	FAMILY NOT NAMED	coord: 18..226
None	No IPR available	PANTHER	PTHR33219:SF4	YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC	coord: 18..226

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C08G152610	Cla021968	Watermelon (97103) v1	wmwmbB100
Cla97C08G152610	Csa6G362410	Cucumber (Chinese Long) v2	cuwmbB487
Cla97C08G152610	MELO3C011488	Melon (DHL92) v3.5.1	mewmbB303
Cla97C08G152610	ClCG08G009800	Watermelon (Charleston Gray)	wcgwmbB336
Cla97C08G152610	CSPI06G19050	Wild cucumber (PI 183967)	cpiwmbB513
Cla97C08G152610	Cucsa.056010	Cucumber (Gy14) v1	cgywmbB045
Cla97C08G152610	CmaCh05G004130	Cucurbita maxima (Rimu)	cmawmbB830
Cla97C08G152610	CmoCh05G004250	Cucurbita moschata (Rifu)	cmowmbB800
Cla97C08G152610	Lsi08G008310	Bottle gourd (USVL1VR-Ls)	lsiwmbB444
Cla97C08G152610	CsGy6G018490	Cucumber (Gy14) v2	cgybwmbB463
Cla97C08G152610	MELO3C011488.2	Melon (DHL92) v3.6.1	medwmbB290
Cla97C08G152610	Carg09311	Silver-seed gourd	carwmbB0150
Cla97C08G152610	CsaV3_6G031930	Cucumber (Chinese Long) v3	cucwmbB505
Cla97C08G152610	Bhi04G001192	Wax gourd	wgowmbB327

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C08G152610	Cucurbita maxima (Rimu)	cmawmbB200
Cla97C08G152610	Cucurbita moschata (Rifu)	cmowmbB183
Cla97C08G152610	Silver-seed gourd	carwmbB0139