Cla97C07G144190 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G144190
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Chlorophyll A-B binding protein
Location	Cla97Chr07 : 31653037 .. 31654977 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATTGCTATCTCTGCCTCATTCCCAAGAGCATCCACTTCAAATCATCATGTTTCCATGAAGAAACAACATGCTCATCAAGCTAGACCTGCCTATTCCTCAACGACGAAAAACCCGACACCAAAGGTAATTAGTACTCTCGACGTCGGGGACTGTGATGGTTTCAATGCTACAGAACATCATGGAAATGTTGCATCAGCTAGGGACAAGCTAGAGGAAGATACTGATGTTTGGAACCATGGTAAAAGGTTCAAAGATAAGAGATGGAGAAATGGAACTTGGGATCTCAATATGTTTGTAAAGAATGGTAAGATGGATTGGGAAGGTGTCATCGTTGCAGGTGAGTGCATCATTTTCTCAAAGGGGATAATTTTAAGTTGAAAATTAGTTTTCGTCCTAAACTTTCACAATTTAGGGGCTATTTAGAATACGTGATTGGTAATTATAGTTGGGGTTATAGTATGTAGGTTATAATAGTTTGTATATTGGGAGCGGACTATTTTAGTCCGAGTTACAGATTATTACAAAATAGTAAACACAGTAAACAAATGAGAGTTTTAACATAATTTTACAGTAGCTAAGGGTGGGTTATAATCATTGGGAACTTCAACTATTATAACGAGAGACTCAAATATTGGGTAGACTATAATAACCAATTCCACTAAAGGTAAGTTTGGGGACCAAAATGTGCAAGTCTTTAGTAATTTAAAATTTATAATGACTTAGTTCGTATCGTGAAAATAATGGCTAAAATTTAAAAAGATATCTTATCGGTAAAGTGATTAGGTACTAAATGTGTTTAATTTAAAATATGTATAATGCCCTTTGACTCCAATATCCAAACATACAAATTTCCCCAAGTGTAAAGATTTAGGATAGTAAAATCTGTTCCTCTGCTGATTGAATGAAGTGCAATAATGGTATATTAATAACAAATTAAGTTATTCAATTTCATTATTGAAATTAGAAGTTTGGATTAACAATGTTAATTGTACAATAATGTAGAAGCAAAGAGGAGGAAGTTTCTTGAATTATATCCAGAACCAGCTACAGATCAAGAACCAGTGCTCTTTAGAAGCTCCATTATACCTTGGTGGACATGGCTCACCACCTCCTACCTCCCACAAGCCGAACTACTTAACGGTAGTCTATCGTGGTTTATCGCATATAGATAATGAAATTTTGCTATATATGTAAATATTTTGGTTCATTTTTCTATATTTGAAAATCGCTCTTATATATAAATGGTAAATAATTCTAAGGGAAATTGTTTTAAATGACAAAATTGTTGGAAATATTTTCAAATATAGCAAAATGTCACTGTTGATAGACATGATCTAGATAAGGATGGATGATAGTGTAAATAAGTTGACTCATTTTGCTATATTCGAAGACAATCCTAATTCTATTTTTTTTAATTTTATTTATTACAATTCAAATATTAAGAGGGGTTAAAGTTTTTTTTTTTCCAATAATCACGGGATATGGGAGTGAACCACGTTAAAAATTTTAAGGGAGTAATGAGTGTCTTATCCACTTAGCTATATATACTCGAATTGGGTATGGGCCATAAGAGGTAACGGTTTTGAACTCAAATGAAAAATATTAATATATGTTAAAGTAGGTAGTTGAGTTAGGTTAAATTGTGTTTGTTAATGATGGTTATATAATTAGTAGTAGTGTTTGTTTGTTGATGCAGGTAGGGCAGCCATGATAGGTTTTTTCATGGCCTATTTAGTGGATGCATTAACAGGAATTGGAATAGTTGGGCAAAGTGGGAATTTCATATGCAAAGCAGCTCTTTTTCTAACAGTCATTGGTGTGTTGCTGTTTAGGCAAACTCAAGACATTGAGGGCTTAAGAAACATAGCTGAAGAAGCTACCTTTTATGACAAGCAATGGCAAGCTTCATGGCAAAACCAAAATCATAAATAG

mRNA sequence

ATGGCTTCAATTGCTATCTCTGCCTCATTCCCAAGAGCATCCACTTCAAATCATCATGTTTCCATGAAGAAACAACATGCTCATCAAGCTAGACCTGCCTATTCCTCAACGACGAAAAACCCGACACCAAAGGTAATTAGTACTCTCGACGTCGGGGACTGTGATGGTTTCAATGCTACAGAACATCATGGAAATGTTGCATCAGCTAGGGACAAGCTAGAGGAAGATACTGATGTTTGGAACCATGGTAAAAGGTTCAAAGATAAGAGATGGAGAAATGGAACTTGGGATCTCAATATGTTTGTAAAGAATGGTAAGATGGATTGGGAAGGTGTCATCGTTGCAGAAGCAAAGAGGAGGAAGTTTCTTGAATTATATCCAGAACCAGCTACAGATCAAGAACCAGTGCTCTTTAGAAGCTCCATTATACCTTGGTGGACATGGCTCACCACCTCCTACCTCCCACAAGCCGAACTACTTAACGGTAGGGCAGCCATGATAGGTTTTTTCATGGCCTATTTAGTGGATGCATTAACAGGAATTGGAATAGTTGGGCAAAGTGGGAATTTCATATGCAAAGCAGCTCTTTTTCTAACAGTCATTGGTGTGTTGCTGTTTAGGCAAACTCAAGACATTGAGGGCTTAAGAAACATAGCTGAAGAAGCTACCTTTTATGACAAGCAATGGCAAGCTTCATGGCAAAACCAAAATCATAAATAG

Coding sequence (CDS)

ATGGCTTCAATTGCTATCTCTGCCTCATTCCCAAGAGCATCCACTTCAAATCATCATGTTTCCATGAAGAAACAACATGCTCATCAAGCTAGACCTGCCTATTCCTCAACGACGAAAAACCCGACACCAAAGGTAATTAGTACTCTCGACGTCGGGGACTGTGATGGTTTCAATGCTACAGAACATCATGGAAATGTTGCATCAGCTAGGGACAAGCTAGAGGAAGATACTGATGTTTGGAACCATGGTAAAAGGTTCAAAGATAAGAGATGGAGAAATGGAACTTGGGATCTCAATATGTTTGTAAAGAATGGTAAGATGGATTGGGAAGGTGTCATCGTTGCAGAAGCAAAGAGGAGGAAGTTTCTTGAATTATATCCAGAACCAGCTACAGATCAAGAACCAGTGCTCTTTAGAAGCTCCATTATACCTTGGTGGACATGGCTCACCACCTCCTACCTCCCACAAGCCGAACTACTTAACGGTAGGGCAGCCATGATAGGTTTTTTCATGGCCTATTTAGTGGATGCATTAACAGGAATTGGAATAGTTGGGCAAAGTGGGAATTTCATATGCAAAGCAGCTCTTTTTCTAACAGTCATTGGTGTGTTGCTGTTTAGGCAAACTCAAGACATTGAGGGCTTAAGAAACATAGCTGAAGAAGCTACCTTTTATGACAAGCAATGGCAAGCTTCATGGCAAAACCAAAATCATAAATAG

Protein sequence

MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDVGDCDGFNATEHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASWQNQNHK

Homology

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BLAST of Cla97C07G144190 vs. NCBI nr
Match: XP_023551912.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.8 bits (1026), Expect = 6.4e-108
Identity = 200/237 (84.39%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDVGDCDGFNAT 60
           MASIAISASFPR+ TSN HVS  +QHA QARP +SS TKNPTP++I T DVGD D F+A 
Sbjct: 1   MASIAISASFPRSCTSN-HVSKNQQHARQARPTHSSMTKNPTPELIRTPDVGDRDAFDAP 60

Query: 61  EHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKRR 120
           + HGNVASA DKLEEDTD  NHGK F D+RW+NGTWDLNMFVKNGKMDWEGVIVAEAKRR
Sbjct: 61  KRHGNVASATDKLEEDTDDLNHGKTFTDERWKNGTWDLNMFVKNGKMDWEGVIVAEAKRR 120

Query: 121 KFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALTG 180
           KFLELYPE AT+ EPVLFRSSIIPWW WLT SYLPQAELLNGRAAMIGFFMAYLVDALTG
Sbjct: 121 KFLELYPETATNHEPVLFRSSIIPWWAWLTRSYLPQAELLNGRAAMIGFFMAYLVDALTG 180

Query: 181 IGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASWQNQN 238
           IGIVGQSGNFI K+ALF+TVIGVLLFRQTQDIEGLR +AEEATFYDKQWQASWQNQN
Sbjct: 181 IGIVGQSGNFISKSALFVTVIGVLLFRQTQDIEGLRKLAEEATFYDKQWQASWQNQN 236

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BLAST of Cla97C07G144190 vs. NCBI nr
Match: XP_022984403.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 395.6 bits (1015), Expect = 1.2e-106
Identity = 201/238 (84.45%), Postives = 214/238 (89.92%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDVGDCD-GFNA 60
           MASIAISASF R+ TSN HVS K+QHA QARP YSS TKNPTP++I T DVG+ D  F+A
Sbjct: 47  MASIAISASFRRSCTSN-HVSKKQQHARQARPTYSSMTKNPTPELIRTPDVGNRDAAFDA 106

Query: 61  TEHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKR 120
            + HGNVASA DKLEEDTD  NHG+ F D+RW+NGTWDLNMFVKNGKMDWEGVIVAEAKR
Sbjct: 107 PKRHGNVASATDKLEEDTDDMNHGQTFTDERWKNGTWDLNMFVKNGKMDWEGVIVAEAKR 166

Query: 121 RKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALT 180
           RKFLELYPE AT+QEPVLFRSSIIPWW WLT SYLPQAELLNGRAAMIGFFMAYLVDALT
Sbjct: 167 RKFLELYPETATNQEPVLFRSSIIPWWAWLTKSYLPQAELLNGRAAMIGFFMAYLVDALT 226

Query: 181 GIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASWQNQN 238
           GIGIVGQSGNFI KAALF+TVIGVLLFRQTQDIEGLR +AEEATFYDKQWQASWQNQN
Sbjct: 227 GIGIVGQSGNFISKAALFVTVIGVLLFRQTQDIEGLRKLAEEATFYDKQWQASWQNQN 283

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BLAST of Cla97C07G144190 vs. NCBI nr
Match: XP_022922577.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 386.7 bits (992), Expect = 5.6e-104
Identity = 195/237 (82.28%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDVGDCDGFNAT 60
           MASIAISASFPR+ TSNH     KQ   QARP YSS TKNPTP++I T  VGD D  +A 
Sbjct: 1   MASIAISASFPRSCTSNH--VSNKQQRRQARPTYSSMTKNPTPELIKTPYVGDRDALDAP 60

Query: 61  EHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKRR 120
           + HGNVASA DKLEEDTD  NHG+ F D+RW+NGTWDLNMFVKNGKMDWEGVIVAEAKRR
Sbjct: 61  KRHGNVASATDKLEEDTDDMNHGQTFTDERWKNGTWDLNMFVKNGKMDWEGVIVAEAKRR 120

Query: 121 KFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALTG 180
           KFLELYPE AT+ EPVLFRSSIIPWW WLT SYLPQAELLNGRAAMIGFFMAYLVDALTG
Sbjct: 121 KFLELYPETATNHEPVLFRSSIIPWWAWLTKSYLPQAELLNGRAAMIGFFMAYLVDALTG 180

Query: 181 IGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASWQNQN 238
           IGIVGQSGNFI KAALF+TVIGVLLFRQT+DIEGLR +AEEATFYDKQWQASWQNQN
Sbjct: 181 IGIVGQSGNFISKAALFVTVIGVLLFRQTKDIEGLRKLAEEATFYDKQWQASWQNQN 235

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BLAST of Cla97C07G144190 vs. NCBI nr
Match: XP_022141114.1 (light-harvesting complex-like protein 3 isotype 1, chloroplastic [Momordica charantia])

HSP 1 Score: 347.8 bits (891), Expect = 2.9e-92
Identity = 178/237 (75.11%), Postives = 197/237 (83.12%), Query Frame = 0


Query: 1   MASI--AISASFPRASTSNHHVSMKKQHAH-QARPAYSSTTKNPTPKVISTLDV--GDCD 60
           MASI  AISAS P   TS HHVS KKQHAH QARPAYS     P P+V+ST++V  G  D
Sbjct: 1   MASISAAISASLPTVCTSQHHVSKKKQHAHYQARPAYSF----PAPEVVSTINVDGGGRD 60

Query: 61  GFNATEHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVIVA 120
            F+  E HG     RDKL EDTD WNHG+RF D+RW+NGTWDLNMFVKNGKMDWEGVIVA
Sbjct: 61  SFDTAERHG-----RDKLNEDTDAWNHGERFTDERWKNGTWDLNMFVKNGKMDWEGVIVA 120

Query: 121 EAKRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAYLV 180
           EAKRRK LE+YPE AT+Q PVLFRSSIIPWW WL+ SYLPQAELLNGRAAM+GFF+AY+V
Sbjct: 121 EAKRRKILEIYPEAATNQHPVLFRSSIIPWWAWLSNSYLPQAELLNGRAAMLGFFVAYVV 180

Query: 181 DALTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQAS 233
           DALTGIGIV QSGNF+CK+ALF+TVI VLLFRQT+D EGLR +AEEATFYDKQWQAS
Sbjct: 181 DALTGIGIVWQSGNFLCKSALFVTVISVLLFRQTEDAEGLRKLAEEATFYDKQWQAS 228

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BLAST of Cla97C07G144190 vs. NCBI nr
Match: XP_008453842.1 (PREDICTED: uncharacterized protein LOC103494445 [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 179/243 (73.66%), Postives = 191/243 (78.60%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKK--QHAHQARPAYSSTTKNPTPKVISTLDVGDCD--- 60
           MASIAISAS PRA+  N HVSMKK  QHAH A+PAYSS TKNPTPKVISTLDVG+ D   
Sbjct: 1   MASIAISASLPRAANPN-HVSMKKKQQHAHLAKPAYSSMTKNPTPKVISTLDVGNRDXXX 60

Query: 61  --GFNATEHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVI 120
                                         +RF DKRW+NGTWDLNMFVKNGKMDWEGVI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERFTDKRWKNGTWDLNMFVKNGKMDWEGVI 120

Query: 121 VAEAKRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAY 180
           V EAKRRKFLEL+PE AT++EPVLFRSSIIPWW WLT SYLPQAELLNGRAAMIGFFM Y
Sbjct: 121 VEEAKRRKFLELHPEAATNEEPVLFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGY 180

Query: 181 LVDALTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASW 237
            VDALTGIGIVGQSGNFICK ALFLTVIGVLLFRQ++D+E LRNIAEEATFYDKQWQ+SW
Sbjct: 181 GVDALTGIGIVGQSGNFICKTALFLTVIGVLLFRQSEDVENLRNIAEEATFYDKQWQSSW 240

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BLAST of Cla97C07G144190 vs. TrEMBL
Match: tr|A0A1S3BXB8|A0A1S3BXB8_CUCME (uncharacterized protein LOC103494445 OS=Cucumis melo OX=3656 GN=LOC103494445 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 8.9e-90
Identity = 179/243 (73.66%), Postives = 191/243 (78.60%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKK--QHAHQARPAYSSTTKNPTPKVISTLDVGDCD--- 60
           MASIAISAS PRA+  N HVSMKK  QHAH A+PAYSS TKNPTPKVISTLDVG+ D   
Sbjct: 1   MASIAISASLPRAANPN-HVSMKKKQQHAHLAKPAYSSMTKNPTPKVISTLDVGNRDXXX 60

Query: 61  --GFNATEHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVI 120
                                         +RF DKRW+NGTWDLNMFVKNGKMDWEGVI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERFTDKRWKNGTWDLNMFVKNGKMDWEGVI 120

Query: 121 VAEAKRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAY 180
           V EAKRRKFLEL+PE AT++EPVLFRSSIIPWW WLT SYLPQAELLNGRAAMIGFFM Y
Sbjct: 121 VEEAKRRKFLELHPEAATNEEPVLFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGY 180

Query: 181 LVDALTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASW 237
            VDALTGIGIVGQSGNFICK ALFLTVIGVLLFRQ++D+E LRNIAEEATFYDKQWQ+SW
Sbjct: 181 GVDALTGIGIVGQSGNFICKTALFLTVIGVLLFRQSEDVENLRNIAEEATFYDKQWQSSW 240

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BLAST of Cla97C07G144190 vs. TrEMBL
Match: tr|A0A0A0KUF5|A0A0A0KUF5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025130 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 6.4e-88
Identity = 171/237 (72.15%), Postives = 183/237 (77.22%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDV---GDCDGF 60
           MASIAISAS PRAS SNH    KKQ  H A+P YSSTTKNPTPKVISTLDV         
Sbjct: 1   MASIAISASLPRASNSNHVSMKKKQRVHLAKPGYSSTTKNPTPKVISTLDVVNRXXXXXX 60

Query: 61  NATEHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEA 120
                                     +RF DKRW+NGTWDLNMFV+NGKMDWEGVIV EA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXERFTDKRWKNGTWDLNMFVQNGKMDWEGVIVEEA 120

Query: 121 KRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDA 180
           KRRKFLE++PE AT+QEPV+FRSSIIPWW WLT SYLPQAELLNGRAAMIGFFM Y VDA
Sbjct: 121 KRRKFLEIHPEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDA 180

Query: 181 LTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASWQ 235
           LTG+GIVGQSGNFICK ALFLTVIGVLLFRQ++DIE LRNIAEEATFYDKQWQ+SWQ
Sbjct: 181 LTGVGIVGQSGNFICKTALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ 237

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BLAST of Cla97C07G144190 vs. TrEMBL
Match: tr|A0A2N9FMI3|A0A2N9FMI3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16270 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.3e-76
Identity = 150/244 (61.48%), Postives = 186/244 (76.23%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDVGDCDGFNAT 60
           MASIAI++S   AS+ +H     K+   Q+  A+S  +K  T  V  TLDV    GFN  
Sbjct: 1   MASIAITSSLHMASSKHH----TKKQTPQSGTAHSLGSKQVTRHV--TLDVEGQKGFNMA 60

Query: 61  EHHGNVAS-------ARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVI 120
           EHHG  AS       A++++E  +D    G +F D+RW+NGTWDLNMFV++GKMDW+GVI
Sbjct: 61  EHHGKSASYNEKSKNAKEEMEHGSDTGPCGPKFVDERWKNGTWDLNMFVQDGKMDWDGVI 120

Query: 121 VAEAKRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAY 180
           VAEA+RRKFLELYPE AT+Q+ VLFR+SIIPWW W   SYLP+AEL+NGRAAM+GFFMAY
Sbjct: 121 VAEARRRKFLELYPEAATEQDTVLFRTSIIPWWAWFMRSYLPEAELINGRAAMVGFFMAY 180

Query: 181 LVDALTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASW 238
           LVDALTG+ +VGQ+GNFICKA LF+TVI V+L R+TQD E L+ +A+EATFYDKQWQASW
Sbjct: 181 LVDALTGLDVVGQTGNFICKAGLFVTVISVILLRRTQDFETLKKLADEATFYDKQWQASW 238

[Close]

BLAST of Cla97C07G144190 vs. TrEMBL
Match: tr|A0A0B0N1D6|A0A0B0N1D6_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_31994 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.4e-71
Identity = 141/242 (58.26%), Postives = 179/242 (73.97%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDVGDCDGFNAT 60
           MASIAISAS  +A  S+HHV+ KKQHA Q +PAYS  TK     V  T+DV    GF   
Sbjct: 231 MASIAISASLQKA-CSSHHVA-KKQHA-QTKPAYSLGTKQAIDAV--TIDVEGQKGFKID 290

Query: 61  EHH------GNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVIV 120
           E         N     DK     ++ +  ++F D+RW+NGTWDLNMFV+NG+MDW+ VIV
Sbjct: 291 EKDQPSPQINNSEGLEDKSANKLEIESSARKFSDERWKNGTWDLNMFVRNGRMDWDSVIV 350

Query: 121 AEAKRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAYL 180
           AEAKRRK+LE+YPE  ++QEPV FRSSIIPWW W   +YLP+AELLNGRAAMIGFF AY+
Sbjct: 351 AEAKRRKYLEMYPETCSNQEPVQFRSSIIPWWAWFMRTYLPEAELLNGRAAMIGFFSAYV 410

Query: 181 VDALTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASWQ 237
           VD LTG+ ++GQ+GNFICK ALF+TVIG++L R+T+D + LR +A+E T+YDKQWQASW+
Sbjct: 411 VDGLTGMDLIGQTGNFICKTALFMTVIGIVLLRKTRDFDNLRKLADEVTYYDKQWQASWK 467

[Close]

BLAST of Cla97C07G144190 vs. TrEMBL
Match: tr|A0A1R3JIV9|A0A1R3JIV9_COCAP (Chlorophyll A-B binding protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_05810 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.2e-71
Identity = 138/244 (56.56%), Postives = 183/244 (75.00%), Query Frame = 0


Query: 1   MASIAISASFPRASTSNHHVSMKKQHAHQARPAYSSTTKNPTPKVISTLDVGDCDGFN-- 60
           MASI+ISAS  RA +S H   ++++     +P YS  TK     V  TLD+    G+   
Sbjct: 1   MASISISASLQRACSSQH---VRRKQKPIPKPTYSLGTKQVMKAV--TLDMEAQKGYKTD 60

Query: 61  -----ATEHHGNVASARDKLEEDTDVWNHGKRFKDKRWRNGTWDLNMFVKNGKMDWEGVI 120
                A+E +       ++L+ED +  +   +F+D+RW+NGTWDLNMFV+NG+MDW+ VI
Sbjct: 61  TKEEPASEMNYKSKDPEERLKEDFETESSAPKFRDERWKNGTWDLNMFVRNGRMDWDSVI 120

Query: 121 VAEAKRRKFLELYPEPATDQEPVLFRSSIIPWWTWLTTSYLPQAELLNGRAAMIGFFMAY 180
           +AEA+RRKFLE++PE  T++EPV FRSSIIPWW WL  +YLP+AELLNGRAAMIGFFMAY
Sbjct: 121 IAEARRRKFLEMHPEATTNEEPVKFRSSIIPWWAWLMRTYLPEAELLNGRAAMIGFFMAY 180

Query: 181 LVDALTGIGIVGQSGNFICKAALFLTVIGVLLFRQTQDIEGLRNIAEEATFYDKQWQASW 238
           +VDALTG+ +VGQ+GNFICKA LF+TVIGVL+ R+TQD + L+ +A+EAT+YDKQWQASW
Sbjct: 181 IVDALTGLDVVGQTGNFICKAGLFVTVIGVLVLRKTQDFDNLKKLADEATYYDKQWQASW 239

[Close]

BLAST of Cla97C07G144190 vs. Swiss-Prot
Match: sp|Q9SYX1|LIL31_ARATH (Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.1 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-54
Identity = 95/153 (62.09%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 85  RFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKRRKFLELYPEPATDQEPVLFRSSIIP 144
           +F+D RW NGTWDL  F K+GK DW+ VIVAEAKRRK+LE  PE  ++ EPVLF +SIIP
Sbjct: 101 KFQDARWINGTWDLKQFEKDGKTDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIP 160

Query: 145 WWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALTGIGIVGQSGNFICKAALFLTVIGVL 204
           WW W+   +LP+AELLNGRAAMIGFFMAY VD+LTG+G+V Q GNF CK  LF+ V GVL
Sbjct: 161 WWAWIKRYHLPEAELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVL 220

Query: 205 LFRQTQDIEGLRNIAEEATFYDKQWQASWQNQN 238
             R+ +D++ L+N+ +E T YDKQWQA+W+N +
Sbjct: 221 FIRKNEDVDKLKNLFDETTLYDKQWQAAWKNDD 253

[Close]

BLAST of Cla97C07G144190 vs. Swiss-Prot
Match: sp|Q6NKS4|LIL32_ARATH (Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIL3.2 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.4e-50
Identity = 87/150 (58.00%), Postives = 117/150 (78.00%), Query Frame = 0


Query: 85  RFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKRRKFLELYPEPATDQEPVLFRSSIIP 144
           ++++ +W NGTWDL  F K+GK DW+ VIV+EAKRRK+LE  PE  ++ E V+F +SIIP
Sbjct: 98  KYQNAKWVNGTWDLKQFEKDGKTDWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTSIIP 157

Query: 145 WWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALTGIGIVGQSGNFICKAALFLTVIGVL 204
           WW W+   +LP+AELLNGRAAMIGFFMAY VD+LTG+G+V Q GNF CK  LF+ V GVL
Sbjct: 158 WWAWMKRYHLPEAELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVL 217

Query: 205 LFRQTQDIEGLRNIAEEATFYDKQWQASWQ 235
             R+ +D++ L+++ +E T YDKQWQA+W+
Sbjct: 218 FIRKNEDLDKLKDLFDETTLYDKQWQAAWK 247

[Close]

BLAST of Cla97C07G144190 vs. TAIR10
Match: AT4G17600.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-56
Identity = 95/153 (62.09%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 85  RFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKRRKFLELYPEPATDQEPVLFRSSIIP 144
           +F+D RW NGTWDL  F K+GK DW+ VIVAEAKRRK+LE  PE  ++ EPVLF +SIIP
Sbjct: 101 KFQDARWINGTWDLKQFEKDGKTDWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTSIIP 160

Query: 145 WWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALTGIGIVGQSGNFICKAALFLTVIGVL 204
           WW W+   +LP+AELLNGRAAMIGFFMAY VD+LTG+G+V Q GNF CK  LF+ V GVL
Sbjct: 161 WWAWIKRYHLPEAELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVL 220

Query: 205 LFRQTQDIEGLRNIAEEATFYDKQWQASWQNQN 238
             R+ +D++ L+N+ +E T YDKQWQA+W+N +
Sbjct: 221 FIRKNEDVDKLKNLFDETTLYDKQWQAAWKNDD 253

[Close]

BLAST of Cla97C07G144190 vs. TAIR10
Match: AT5G47110.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-51
Identity = 87/150 (58.00%), Postives = 117/150 (78.00%), Query Frame = 0


Query: 85  RFKDKRWRNGTWDLNMFVKNGKMDWEGVIVAEAKRRKFLELYPEPATDQEPVLFRSSIIP 144
           ++++ +W NGTWDL  F K+GK DW+ VIV+EAKRRK+LE  PE  ++ E V+F +SIIP
Sbjct: 98  KYQNAKWVNGTWDLKQFEKDGKTDWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTSIIP 157

Query: 145 WWTWLTTSYLPQAELLNGRAAMIGFFMAYLVDALTGIGIVGQSGNFICKAALFLTVIGVL 204
           WW W+   +LP+AELLNGRAAMIGFFMAY VD+LTG+G+V Q GNF CK  LF+ V GVL
Sbjct: 158 WWAWMKRYHLPEAELLNGRAAMIGFFMAYFVDSLTGVGLVDQMGNFFCKTLLFVAVAGVL 217

Query: 205 LFRQTQDIEGLRNIAEEATFYDKQWQASWQ 235
             R+ +D++ L+++ +E T YDKQWQA+W+
Sbjct: 218 FIRKNEDLDKLKDLFDETTLYDKQWQAAWK 247

The following BLAST results are available for this feature:

BLAST of Cla97C07G144190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551912.1	6.4e-108	84.39	light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita pepo...	[more]
XP_022984403.1	1.2e-106	84.45	light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxi...	[more]
XP_022922577.1	5.6e-104	82.28	light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita mosc...	[more]
XP_022141114.1	2.9e-92	75.11	light-harvesting complex-like protein 3 isotype 1, chloroplastic [Momordica char...	[more]
XP_008453842.1	1.3e-89	73.66	PREDICTED: uncharacterized protein LOC103494445 [Cucumis melo]	[more]

BLAST of Cla97C07G144190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BXB8\|A0A1S3BXB8_CUCME	8.9e-90	73.66	uncharacterized protein LOC103494445 OS=Cucumis melo OX=3656 GN=LOC103494445 PE=...	[more]
tr\|A0A0A0KUF5\|A0A0A0KUF5_CUCSA	6.4e-88	72.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025130 PE=4 SV=1	[more]
tr\|A0A2N9FMI3\|A0A2N9FMI3_FAGSY	3.3e-76	61.48	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16270 PE=4 SV=1	[more]
tr\|A0A0B0N1D6\|A0A0B0N1D6_GOSAR	2.4e-71	58.26	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_31994 PE=4 SV=1	[more]
tr\|A0A1R3JIV9\|A0A1R3JIV9_COCAP	3.2e-71	56.56	Chlorophyll A-B binding protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_058...	[more]

BLAST of Cla97C07G144190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SYX1\|LIL31_ARATH	1.6e-54	62.09	Light-harvesting complex-like protein 3 isotype 1, chloroplastic OS=Arabidopsis ...	[more]
sp\|Q6NKS4\|LIL32_ARATH	5.4e-50	58.00	Light-harvesting complex-like protein 3 isotype 2, chloroplastic OS=Arabidopsis ...	[more]

BLAST of Cla97C07G144190 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17600.1	9.0e-56	62.09	Chlorophyll A-B binding family protein	[more]
AT5G47110.1	3.0e-51	58.00	Chlorophyll A-B binding family protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
biological_process	GO:1902326	positive regulation of chlorophyll biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0019899	enzyme binding
molecular_function	GO:0001104	RNA polymerase II transcription cofactor activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043495	protein anchor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G144190.1	Cla97C07G144190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR14154:SF13	SUBFAMILY NOT NAMED	coord: 56..237
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 56..237
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 137..191

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G144190	Cla010696	Watermelon (97103) v1	wmwmbB174
Cla97C07G144190	Csa4G025130	Cucumber (Chinese Long) v2	cuwmbB316
Cla97C07G144190	MELO3C017629	Melon (DHL92) v3.5.1	mewmbB498
Cla97C07G144190	ClCG07G017170	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G144190	CSPI04G04280	Wild cucumber (PI 183967)	cpiwmbB326
Cla97C07G144190	CmoCh16G002500	Cucurbita moschata (Rifu)	cmowmbB337
Cla97C07G144190	Lsi07G001350	Bottle gourd (USVL1VR-Ls)	lsiwmbB406
Cla97C07G144190	CsGy4G004190	Cucumber (Gy14) v2	cgybwmbB298
Cla97C07G144190	MELO3C017629.2	Melon (DHL92) v3.6.1	medwmbB491
Cla97C07G144190	Carg16771	Silver-seed gourd	carwmbB0911
Cla97C07G144190	CsaV3_4G004370	Cucumber (Chinese Long) v3	cucwmbB324
Cla97C07G144190	Bhi01G001989	Wax gourd	wgowmbB222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G144190	Watermelon (97103) v2	wmbwmbB033
Cla97C07G144190	Silver-seed gourd	carwmbB0400
Cla97C07G144190	Silver-seed gourd	carwmbB0744
Cla97C07G144190	Cucumber (Gy14) v2	cgybwmbB378
Cla97C07G144190	Cucumber (Gy14) v1	cgywmbB112
Cla97C07G144190	Cucurbita maxima (Rimu)	cmawmbB352
Cla97C07G144190	Cucurbita maxima (Rimu)	cmawmbB656
Cla97C07G144190	Cucurbita maxima (Rimu)	cmawmbB775
Cla97C07G144190	Cucurbita moschata (Rifu)	cmowmbB630
Cla97C07G144190	Cucurbita moschata (Rifu)	cmowmbB749
Cla97C07G144190	Wild cucumber (PI 183967)	cpiwmbB414
Cla97C07G144190	Cucumber (Chinese Long) v3	cucwmbB410
Cla97C07G144190	Cucumber (Chinese Long) v2	cuwmbB394
Cla97C07G144190	Bottle gourd (USVL1VR-Ls)	lsiwmbB028
Cla97C07G144190	Melon (DHL92) v3.6.1	medwmbB031
Cla97C07G144190	Melon (DHL92) v3.5.1	mewmbB035
Cla97C07G144190	Watermelon (Charleston Gray)	wcgwmbB117