Cla97C07G133630 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G133630
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Voltage-dependent T-type calcium channel subunit alpha-1I, putative
Location	Cla97Chr07 : 6683414 .. 6683833 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTCTCTGCATCTCTCATAATACTACCGCCACCACCACCCTTCCTCCACCGCCCCTCCACCGCCGTCTTCCCCATCTTCAGGCCAACTCCACCCACTTCCTCACCATGGCTCCGCCGTCGAGCTCAGGCGGCAGCGCCAAGATGTGTTGGTCAGGGTGGGTGGGGGGGATCTGTGGCGGAGCTGGACATAGAAGAGTGGCTGAAGCTAGGGAGGCTGGAGGAGAAGTGCGGCGGCGGAGGGAAGGGATTGGTGGAGCTACTTGAATGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGACCCTACAGATTATAATAGAAGAGCTAAGATTTTCAGTACCAGTTCTAAAGTGTTTCAAGCTCTCAAGCAACATTCTGATGCTGCTTCTCCTCCGCCCCTATCTTGA

mRNA sequence

ATGCAAGTCTCTGCATCTCTCATAATACTACCGCCACCACCACCCTTCCTCCACCGCCCCTCCACCGCCGTCTTCCCCATCTTCAGGCCAACTCCACCCACTTCCTCACCATGGCTCCGCCGTCGAGCTCAGGCGGCAGCGCCAAGATGTGTTGGTCAGGGTGGGTGGGGGGGATCTGTGGCGGAGCTGGACATAGAAGAGTGGCTGAAGCTAGGGAGGCTGGAGGAGAAGTGCGGCGGCGGAGGGAAGGGATTGGTGGAGCTACTTGAATGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGACCCTACAGATTATAATAGAAGAGCTAAGATTTTCAGTACCAGTTCTAAAGTGTTTCAAGCTCTCAAGCAACATTCTGATGCTGCTTCTCCTCCGCCCCTATCTTGA

Coding sequence (CDS)

ATGCAAGTCTCTGCATCTCTCATAATACTACCGCCACCACCACCCTTCCTCCACCGCCCCTCCACCGCCGTCTTCCCCATCTTCAGGCCAACTCCACCCACTTCCTCACCATGGCTCCGCCGTCGAGCTCAGGCGGCAGCGCCAAGATGTGTTGGTCAGGGTGGGTGGGGGGGATCTGTGGCGGAGCTGGACATAGAAGAGTGGCTGAAGCTAGGGAGGCTGGAGGAGAAGTGCGGCGGCGGAGGGAAGGGATTGGTGGAGCTACTTGAATGTTTGGAAAGAGAAGCCATTATGGGGGAAGATGAAGGTAGAGACCCTACAGATTATAATAGAAGAGCTAAGATTTTCAGTACCAGTTCTAAAGTGTTTCAAGCTCTCAAGCAACATTCTGATGCTGCTTCTCCTCCGCCCCTATCTTGA

Protein sequence

MQVSASLIILPPPPPFLHRPSTAVFPIFRPTPPTSSPWLRRRAQAAAPRCVGQGGWGGSVAELDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIFSTSSKVFQALKQHSDAASPPPLS

Homology

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BLAST of Cla97C07G133630 vs. NCBI nr
Match: XP_011655051.1 (PREDICTED: uncharacterized protein LOC105435471 [Cucumis sativus] >KGN50752.1 hypothetical protein Csa_5G223100 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 5.5e-51
Identity = 114/141 (80.85%), Postives = 121/141 (85.82%), Query Frame = 0


Query: 1   MQVSASLIXXXXXXXFLHRPSTAVFPIFRPTPPTSSPWL-RRRAQAAA-PRCVGQGGWGG 60
           MQ+SASLI   XXXX LHRPSTA FP  RPTP  SSPWL  R A+A A PRCV QGGWG 
Sbjct: 1   MQLSASLI-SPXXXXLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGS 60

Query: 61  S--VAELDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIF 120
           S  V E+DIEEWLKLGRLEEKCGGGGKG+VELLECLE+EAIMGEDEGRDPTDYNRRAKIF
Sbjct: 61  SVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIMGEDEGRDPTDYNRRAKIF 120

Query: 121 STSSKVFQALKQHSDAASPPP 138
           STSS+VFQALKQHSDA +PPP
Sbjct: 121 STSSEVFQALKQHSDAVAPPP 140

[Close]

BLAST of Cla97C07G133630 vs. NCBI nr
Match: XP_022988679.1 (uncharacterized protein LOC111485933 [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 5.5e-51
Identity = 104/134 (77.61%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 3   VSASLIXXXXXXXFLHRPSTAVFPIFRPTPPTSSPWLRRRAQAAAPRCVGQGGWGGSVAE 62
           VSASLI       F HR ST VFP  RP    S PW  RR  AAAPRCV QGGWGGSVAE
Sbjct: 4   VSASLIIPPPSPSFFHRSSTVVFPKIRPISAISPPWFCRRVAAAAPRCVSQGGWGGSVAE 63

Query: 63  LDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIFSTSSKV 122
            +IEEWLKLGRL+EKCGGGGKG+VELLECLEREAIMGEDEGR+PTDYNRRAKIFSTSS+V
Sbjct: 64  QEIEEWLKLGRLDEKCGGGGKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSSEV 123

Query: 123 FQALKQHSDAASPP 137
           FQALKQHSDAA  P
Sbjct: 124 FQALKQHSDAAPDP 137

[Close]

BLAST of Cla97C07G133630 vs. NCBI nr
Match: XP_022942933.1 (uncharacterized protein LOC111447817 [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 105/135 (77.78%), Postives = 109/135 (80.74%), Query Frame = 0


Query: 3   VSASLIXXXXXXXFLHRPSTAVFPIFRPTPPTSSPWLRRRAQAAAPRCVGQGGWGGSVAE 62
           VSASLI       F HR ST VF   RP    S  WL RR  AAAPRCV QGGWGGSVAE
Sbjct: 4   VSASLITPPPSPPFFHRSSTVVFHKLRPISAISPSWLCRRVAAAAPRCVSQGGWGGSVAE 63

Query: 63  LDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIFSTSSKV 122
            +IEEWLKLGRLEEKCGGGGKG+VELLECLEREAIMGEDEGR+PTDYNRRAKIFSTSS+V
Sbjct: 64  PEIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSSEV 123

Query: 123 FQALKQHSDAASPPP 138
           FQALKQHSDAA  PP
Sbjct: 124 FQALKQHSDAAPDPP 138

[Close]

BLAST of Cla97C07G133630 vs. NCBI nr
Match: XP_023547061.1 (uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 104/133 (78.20%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 4   SASLIXXXXXXXFLHRPSTAVFPIFRPTPPTSSPWLRRRAQAAAPRCVGQGGWGGSVAEL 63
           SASLI       FLHR ST  FP  RP    S PW  RR  AAAPRCV QGGWGGSVAE 
Sbjct: 60  SASLIIPPPSPPFLHRSSTVGFPKLRPISAISPPWFCRRVAAAAPRCVSQGGWGGSVAEP 119

Query: 64  DIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIFSTSSKVF 123
           +IEEWLKLGRLEEKCGGGGKG+VELLECLEREAIMGEDEGR+PTDYNRRAKIFSTSS+VF
Sbjct: 120 EIEEWLKLGRLEEKCGGGGKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSSEVF 179

Query: 124 QALKQHSDAASPP 137
           QALKQHSDAA  P
Sbjct: 180 QALKQHSDAAPDP 192

[Close]

BLAST of Cla97C07G133630 vs. NCBI nr
Match: XP_008456969.1 (PREDICTED: uncharacterized protein LOC103496760 [Cucumis melo])

HSP 1 Score: 194.9 bits (494), Expect = 1.8e-46
Identity = 101/133 (75.94%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MQVSASLIXXXXXXXFLHRPSTAVFPIFRPTPPTSSPWLRRRAQAAA--PRCVGQGGWGG 60
           MQ+SASLI        L RPSTA FP  R TP  SSPWL  RA  A   PRCV QGGWG 
Sbjct: 73  MQLSASLIIPPP----LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGT 132

Query: 61  SVAELDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIFST 120
           SVAE+DIEEWLKLGRLEEKCG GGKG+VELLECLE+EAIMGEDEGR+PTDYNRRAKIFST
Sbjct: 133 SVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFST 192

Query: 121 SSKVFQALKQHSD 132
           SS+VFQALKQH D
Sbjct: 193 SSEVFQALKQHPD 201

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BLAST of Cla97C07G133630 vs. TrEMBL
Match: tr|A0A0A0KQQ4|A0A0A0KQQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223100 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51
Identity = 114/141 (80.85%), Postives = 121/141 (85.82%), Query Frame = 0


Query: 1   MQVSASLIXXXXXXXFLHRPSTAVFPIFRPTPPTSSPWL-RRRAQAAA-PRCVGQGGWGG 60
           MQ+SASLI   XXXX LHRPSTA FP  RPTP  SSPWL  R A+A A PRCV QGGWG 
Sbjct: 1   MQLSASLI-SPXXXXLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGS 60

Query: 61  S--VAELDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIF 120
           S  V E+DIEEWLKLGRLEEKCGGGGKG+VELLECLE+EAIMGEDEGRDPTDYNRRAKIF
Sbjct: 61  SVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIMGEDEGRDPTDYNRRAKIF 120

Query: 121 STSSKVFQALKQHSDAASPPP 138
           STSS+VFQALKQHSDA +PPP
Sbjct: 121 STSSEVFQALKQHSDAVAPPP 140

[Close]

BLAST of Cla97C07G133630 vs. TrEMBL
Match: tr|A0A1S3C540|A0A1S3C540_CUCME (uncharacterized protein LOC103496760 OS=Cucumis melo OX=3656 GN=LOC103496760 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-46
Identity = 101/133 (75.94%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MQVSASLIXXXXXXXFLHRPSTAVFPIFRPTPPTSSPWLRRRAQAAA--PRCVGQGGWGG 60
           MQ+SASLI        L RPSTA FP  R TP  SSPWL  RA  A   PRCV QGGWG 
Sbjct: 73  MQLSASLIIPPP----LLRPSTAFFPKLRSTPALSSPWLGHRAAEAVVEPRCVSQGGWGT 132

Query: 61  SVAELDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIFST 120
           SVAE+DIEEWLKLGRLEEKCG GGKG+VELLECLE+EAIMGEDEGR+PTDYNRRAKIFST
Sbjct: 133 SVAEVDIEEWLKLGRLEEKCGSGGKGIVELLECLEKEAIMGEDEGREPTDYNRRAKIFST 192

Query: 121 SSKVFQALKQHSD 132
           SS+VFQALKQH D
Sbjct: 193 SSEVFQALKQHPD 201

[Close]

BLAST of Cla97C07G133630 vs. TrEMBL
Match: tr|M5XRG8|M5XRG8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G265400 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-20
Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 40  RRRAQAAAPRCVGQGGWGGSVAELD------------IEEWLKLGRLEEKCGGGGKGLVE 99
           ++ + A   RCV  G   G V+E++             EEWL++GRL EKC  G +G+VE
Sbjct: 55  KKSSSAMVVRCVDTGCSSGPVSEIEGELETEIRPEDGAEEWLRVGRLREKC--GDRGMVE 114

Query: 100 LLECLEREAIMGEDEGRDPTDYNRRAKIFSTSSKVFQALKQHSDA 133
           LLECLEREAIMGEDEG++P+DYNRRA+IF  SS+VFQALK+ + +
Sbjct: 115 LLECLEREAIMGEDEGKEPSDYNRRAQIFYKSSRVFQALKERNQS 157

[Close]

BLAST of Cla97C07G133630 vs. TrEMBL
Match: tr|W9RTQ0|W9RTQ0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002050 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.1e-19
Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 46  AAPRCVGQGGWGGSVAELDIEEWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRD 105
           +AP    +    G+V+  ++ +W+K  RL EKC G G+G+VE+LECLEREAIMGED+GR+
Sbjct: 10  SAPAARAERELEGAVSAEEVADWMKAARLSEKC-GEGRGMVEILECLEREAIMGEDQGRE 69

Query: 106 PTDYNRRAKIFSTSSKVFQALKQHSDAAS 135
            +DYNRRA+IF  SS+VFQALK+ + AA+
Sbjct: 70  ASDYNRRAQIFDRSSRVFQALKESTSAAA 97

[Close]

BLAST of Cla97C07G133630 vs. TrEMBL
Match: tr|A0A2P5DCX1|A0A2P5DCX1_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_075780 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.1e-19
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 62  ELDIE---EWLKLGRLEEKCGGGGKGLVELLECLEREAIMGEDEGRDPTDYNRRAKIFST 121
           E+ +E   EW+K G L EKC GGG+G+VELLECLEREAIMGED GR+P DYNRRA+IF  
Sbjct: 86  EMSVEEAAEWMKAGSLREKC-GGGRGVVELLECLEREAIMGEDHGREPNDYNRRAQIFDR 145

Query: 122 SSKVFQALKQHSDAASP 136
           S++VFQALK+ +  ++P
Sbjct: 146 SARVFQALKESTGTSTP 161

[Close]

BLAST of Cla97C07G133630 vs. TAIR10
Match: AT5G05220.1 (unknown protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17
Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 39  LRRRAQAAAPRCVGQGG-WGGSVAELDIEEWLKLGRLEEKCGGG-GKGLVELLECLEREA 98
           +++    AA RCV  G  +  ++  +  EE  +L +    CGG   +G+ ELLECLE+EA
Sbjct: 38  VKKERWVAAARCVASGSDYAAAMEPITPEEEEELTQRRGICGGEVNRGVWELLECLEKEA 97

Query: 99  IMGEDEGRDPTDYNRRAKIFSTSSKVFQALKQHSDAA 134
           IMG D+GRDP DYNRRAKIF  SSK+F+ L +  D A
Sbjct: 98  IMGNDDGRDPRDYNRRAKIFDKSSKIFKNLNEQRDQA 134

The following BLAST results are available for this feature:

BLAST of Cla97C07G133630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655051.1	5.5e-51	80.85	PREDICTED: uncharacterized protein LOC105435471 [Cucumis sativus] >KGN50752.1 hy...	[more]
XP_022988679.1	5.5e-51	77.61	uncharacterized protein LOC111485933 [Cucurbita maxima]	[more]
XP_022942933.1	2.1e-50	77.78	uncharacterized protein LOC111447817 [Cucurbita moschata]	[more]
XP_023547061.1	2.1e-50	78.20	uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo]	[more]
XP_008456969.1	1.8e-46	75.94	PREDICTED: uncharacterized protein LOC103496760 [Cucumis melo]	[more]

BLAST of Cla97C07G133630 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KQQ4\|A0A0A0KQQ4_CUCSA	3.6e-51	80.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G223100 PE=4 SV=1	[more]
tr\|A0A1S3C540\|A0A1S3C540_CUCME	1.2e-46	75.94	uncharacterized protein LOC103496760 OS=Cucumis melo OX=3656 GN=LOC103496760 PE=...	[more]
tr\|M5XRG8\|M5XRG8_PRUPE	3.3e-20	52.38	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G265400 PE=4 SV=1	[more]
tr\|W9RTQ0\|W9RTQ0_9ROSA	8.1e-19	55.06	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002050 PE=4 SV=1	[more]
tr\|A0A2P5DCX1\|A0A2P5DCX1_PARAD	8.1e-19	63.64	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_075780 PE...	[more]

BLAST of Cla97C07G133630 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C07G133630 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05220.1	2.8e-17	47.42	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G133630.1	Cla97C07G133630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37758	FAMILY NOT NAMED	coord: 66..133

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G133630	Csa5G223100	Cucumber (Chinese Long) v2	cuwmbB392
Cla97C07G133630	MELO3C020169	Melon (DHL92) v3.5.1	mewmbB068
Cla97C07G133630	ClCG07G005260	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G133630	CSPI05G11690	Wild cucumber (PI 183967)	cpiwmbB412
Cla97C07G133630	CmaCh04G010560	Cucurbita maxima (Rimu)	cmawmbB780
Cla97C07G133630	Lsi04G010080	Bottle gourd (USVL1VR-Ls)	lsiwmbB298
Cla97C07G133630	CsGy5G008940	Cucumber (Gy14) v2	cgybwmbB375
Cla97C07G133630	MELO3C020169.2	Melon (DHL92) v3.6.1	medwmbB062
Cla97C07G133630	Carg00158	Silver-seed gourd	carwmbB0700
Cla97C07G133630	Carg24466	Silver-seed gourd	carwmbB0953
Cla97C07G133630	CsaV3_5G011110	Cucumber (Chinese Long) v3	cucwmbB407

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G133630	Watermelon (97103) v2	wmbwmbB076
Cla97C07G133630	Cucumber (Gy14) v1	cgywmbB244
Cla97C07G133630	Cucurbita maxima (Rimu)	cmawmbB781
Cla97C07G133630	Cucurbita moschata (Rifu)	cmowmbB754
Cla97C07G133630	Cucurbita moschata (Rifu)	cmowmbB755
Cla97C07G133630	Watermelon (97103) v1	wmwmbB167
Cla97C07G133630	Wax gourd	wgowmbB538