Cla97C05G101540 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G101540
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Cold regulated gene 27, putative isoform 1
Location	Cla97Chr05 : 30118579 .. 30120305 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCAGGTACTTACCCTACTTTCTTCCTCAATACTTCCAATTATATTCGTTTTAGATGTTTTTTGTTGTTCCGATTAGGTTTTGCTTCTCTGATGTTTCGTATCTTCAATTTCATGCTTTGTCACCGTGACTGCACTGTTTCTCTCTATTTTCGTGTTTAAAGTGAAAAATATACGAATTAAGCAAGTGAAAGAAAGAGGAAGTGGAAGAATACAGTACTGCTTTCGCACTTACTTCTCGTGACTGAAGGATTTTTATTTTGTATCTTGTTCTGCTCTGTTTGGATCGATCTTGCCCTTTGTCCATGGAATTTGGAGGGATGTGTAAGGGGTTTGGATCTATGGCCAATTATTCTGGAAATTCAGCATGAGTTTTGATTGTTTAACATTATGATTCGTGATTAAGATGACTAATAGTAGCGTTTTCCCGTTATTTATTAAGATAGAGCATGAACTTGCCGCGGGAACTGCTGATAATGCGGTTTCGGTTTTAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTCAGCCAAATGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGCCAGGTTCAGTGCCGATTGCTCTTTCTTGATGAGTTTTAACTCTTTTCTGATTATGGCTTGTAAATTCTCTTTTTGTTTTTTTCCTTGCTTTCATCTACTCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAATAATTCAGGACCTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGGTAGATCTTTGGGCCTTAGACATTATAAATTATCAATATTTCATTGATAGATTTGTGCCTCCCCTTGGTTGTAATTGTAATTTAGTTTATCAAGTTGAAGTATGCTAGTTAGTGATTCTACGTTGGAGGATTTTTGCTCTGTATCTAGTCTTTACTACCGAAGTCTAAACAAATTAATGTGACTGAAGTGAAACTGAACTTTTCATTGCAATCTGCTATGTCCAAGTTCCTCTTATGATTTTAATTTCAAATTGTACGGCAATCATAGTTTCACTGATATGAAACTGAATTATTTCAGATGATAATGACTTTTAATTTTAAGCTGGACAAATGATTTTCATGTTGCAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAAAGGAAGCAGTGATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTAGAAGTGATATCAACTTAACTACCATCTCTTGCTCCAAAATGATGATCACTGATTTCTTTAGGTTGTTCCTTAA

mRNA sequence

ATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTCAGCCAAATGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGCCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAATAATTCAGGACCTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAAAGGAAGCAGTGATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTTGTTCCTTAA

Coding sequence (CDS)

ATGGAGTTGTTACCTCGAAATTTGGAGAATCTCAAGGCCGTAGAAACTCGCTCCGACTCACTCGTCTCTGAATTCGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCAGGGCACTCATATGACGGATTCTTTACCTTCTGATTGGACCGATGAGAAGCACCATTTGTTTCTTGAATCCATGGAGGCATCGTTTGTCAGCCAAATGTTTGATACTGAGCATTCAGTTGGTTCCTGCCCCAGGAAGGAAAATTCTTCACGCACAAAATTGCTCGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGCCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAACCTACTGAATCTCGGTCGAACTTGTTGAATGATTACCAAGCTCTCTCACATAATCCTTGGATACATCACTTTAGAGCTGCTCGTAAAAACAAGAATGTTGCGTGCAAAAGTCAAACTATCGGTTCAGGAGGAAGGAATTTGTCGCCATTCACAGCAGCTAATAATTCAGGACCTATGCATACTTGTGAGTCTAATTTGTCCCAGCAATATATCAGCAGTAATAAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGCTGAAAAAGGAAGCAGTGATTGCAATGGCAAAAGGGTCAAAATTCCAGAAACCAATGCTTTGATCAATGACCAGGTTGTTCCTTAA

Protein sequence

MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVVP

Homology

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BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_022935854.1 (uncharacterized protein LOC111442637 isoform X1 [Cucurbita moschata])

HSP 1 Score: 394.8 bits (1013), Expect = 2.1e-106
Identity = 202/242 (83.47%), Postives = 214/242 (88.43%), Query Frame = 0


Query: 1   MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHH 60
           MELLP NLEN  AVETR+DSL+SE AKDESTEFALPVESSS GTHMTDS+PSDWTDEKHH
Sbjct: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  LFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSW 120
           LFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQSASHVHSHFGQFKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHSHFGQFKVLRRGSW 120

Query: 121 KNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAAN 180
           KNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

Query: 181 NSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQ 240
           +S P+  C+S+LS QYISSN+EVSDQNFVDEDRE   GSSDC N KRV  PETNALIN+Q
Sbjct: 181 DSEPLRACDSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCSNAKRVNTPETNALINEQ 240

Query: 241 VV 242
            +
Sbjct: 241 KI 242

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BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_022935855.1 (uncharacterized protein LOC111442637 isoform X2 [Cucurbita moschata])

HSP 1 Score: 394.4 bits (1012), Expect = 2.7e-106
Identity = 202/240 (84.17%), Postives = 213/240 (88.75%), Query Frame = 0


Query: 1   MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHH 60
           MELLP NLEN  AVETR+DSL+SE AKDESTEFALPVESSS GTHMTDS+PSDWTDEKHH
Sbjct: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  LFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSW 120
           LFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQSASHVHSHFGQFKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHSHFGQFKVLRRGSW 120

Query: 121 KNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAAN 180
           KNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

Query: 181 NSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDC-NGKRVKIPETNALINDQ 240
           +S P+  C+S+LS QYISSN+EVSDQNFVDEDRE   GSSDC N KRV  PETNALIN+Q
Sbjct: 181 DSEPLRACDSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCSNAKRVNTPETNALINEQ 240

[Close]

BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_022976397.1 (uncharacterized protein LOC111476815 isoform X1 [Cucurbita maxima])

HSP 1 Score: 392.1 bits (1006), Expect = 1.4e-105
Identity = 199/241 (82.57%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 1   MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHH 60
           MELLP NLEN  AVETR+D L+SE  KD+STEFALPVESSS GTHMTDS+PSDWTDEKHH
Sbjct: 1   MELLPPNLENHIAVETRTDLLISELPKDDSTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  LFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSW 120
           LFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQSASHVH+HFGQFKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHAHFGQFKVLRRGSW 120

Query: 121 KNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAAN 180
           KNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

Query: 181 NSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQV 240
           NS P+  C S+LS QYISSN+EVSDQNFVDEDRE   GSSDCN KRV  PETNALIN+Q 
Sbjct: 181 NSEPLRACGSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCNAKRVNTPETNALINEQK 240

Query: 241 V 242
           +
Sbjct: 241 I 241

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BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_022976398.1 (uncharacterized protein LOC111476815 isoform X2 [Cucurbita maxima])

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105
Identity = 199/239 (83.26%), Postives = 210/239 (87.87%), Query Frame = 0


Query: 1   MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHH 60
           MELLP NLEN  AVETR+D L+SE  KD+STEFALPVESSS GTHMTDS+PSDWTDEKHH
Sbjct: 1   MELLPPNLENHIAVETRTDLLISELPKDDSTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  LFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSW 120
           LFLESME SFVSQMFD+ HSVGSCPRKENSS TKL GQSQSASHVH+HFGQFKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHAHFGQFKVLRRGSW 120

Query: 121 KNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAAN 180
           KNINFE TESRSNLLND+QALS NPWIHHFRA RKNKNVACKSQ IGSGGRNL P  AAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

Query: 181 NSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQ 240
           NS P+  C S+LS QYISSN+EVSDQNFVDEDRE   GSSDCN KRV  PETNALIN+Q
Sbjct: 181 NSEPLRACGSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCNAKRVNTPETNALINEQ 239

[Close]

BLAST of Cla97C05G101540 vs. NCBI nr
Match: XP_011654107.1 (PREDICTED: uncharacterized protein LOC101214397 isoform X3 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 4.8e-103
Identity = 194/242 (80.17%), Postives = 210/242 (86.78%), Query Frame = 0


Query: 1   MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHH 60
           MELLP NL++L   ETR+DSLVSEF KD+STEF+ P+ESSS+GTHMTDS+PSDWTDEKHH
Sbjct: 1   MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHH 60

Query: 61  LFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSW 120
           LFLESMEASFVSQMFD+ HSVGSCP K+NSSRTKLL +SQSASH HS FGQFKVLRRGSW
Sbjct: 61  LFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSW 120

Query: 121 KNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAAN 180
           KNINFEPTESRSN LN+YQALSHNPWIHHFRAARKNKNV CKSQ IGS GRN     AAN
Sbjct: 121 KNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAAN 180

Query: 181 NSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQV 240
           NSGP+   +S+LSQQYIS+NKEVSDQNFVDE  E EKGS DCN KR    ETNALINDQV
Sbjct: 181 NSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQV 240

Query: 241 VP 243
           VP
Sbjct: 241 VP 242

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BLAST of Cla97C05G101540 vs. TrEMBL
Match: tr|A0A0A0L0A2|A0A0A0L0A2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639810 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.3e-101
Identity = 191/240 (79.58%), Postives = 208/240 (86.67%), Query Frame = 0


Query: 1   MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHH 60
           MELLP NL++L   ETR+DSLVSEF KD+STEF+ P+ESSS+GTHMTDS+PSDWTDEKHH
Sbjct: 77  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHH 136

Query: 61  LFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSW 120
           LFLESMEASFVSQMFD+ HSVGSCP K+NSSRTKLL +SQSASH HS FGQFKVLRRGSW
Sbjct: 137 LFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSW 196

Query: 121 KNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAAN 180
           KNINFEPTESRSN LN+YQALSHNPWIHHFRAARKNKNV CKSQ IGS GRN     AAN
Sbjct: 197 KNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAAN 256

Query: 181 NSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDCNGKRVKIPETNALINDQV 240
           NSGP+   +S+LSQQYIS+NKEVSDQNFVDE  E EKGS DCN KR    ETNALINDQ+
Sbjct: 257 NSGPIRASDSDLSQQYISNNKEVSDQNFVDEVIEVEKGSIDCNAKRANASETNALINDQL 316

[Close]

BLAST of Cla97C05G101540 vs. TrEMBL
Match: tr|A0A1S3BU49|A0A1S3BU49_CUCME (uncharacterized protein LOC103493542 OS=Cucumis melo OX=3656 GN=LOC103493542 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 3.1e-98
Identity = 185/223 (82.96%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 1   MELLPRNLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHH 60
           MELLPRNL+NL + E RSDSLVSEF KD STEF  P+ESSS+GTHMTDS+PSDWTDEKHH
Sbjct: 1   MELLPRNLDNLNSREARSDSLVSEFVKDGSTEFCRPIESSSRGTHMTDSVPSDWTDEKHH 60

Query: 61  LFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSW 120
           LFLESMEASFVSQMFD+ HSVGSCP K+NSSRTKLL +SQSASHVHSHFGQFKVLRRGSW
Sbjct: 61  LFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHVHSHFGQFKVLRRGSW 120

Query: 121 KNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQTIGSGGRNLSPFTAAN 180
           KNINFEPTESRSN LN+YQALSHNPWIHHF+AARKNKNVACKSQ IGS GRN     AAN
Sbjct: 121 KNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQAIGSRGRNSLSLEAAN 180

Query: 181 NSGPMHTCESNLSQQYISSNKEVSDQNFVDEDREAEKGSSDCN 224
           NSGP+    S+LSQQYISSNKEVSDQNFVDE  E EKGS DCN
Sbjct: 181 NSGPIRASNSDLSQQYISSNKEVSDQNFVDEVVEVEKGSRDCN 223

[Close]

BLAST of Cla97C05G101540 vs. TrEMBL
Match: tr|A0A2R6Q063|A0A2R6Q063_ACTCH (Autophagy-related protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc23741 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.3e-27
Identity = 86/217 (39.63%), Postives = 117/217 (53.92%), Query Frame = 0


Query: 37  VESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLL 96
           VE  SQ +   D + ++WTDEKH L+L+SMEASFV  +++    +G   ++E S   K  
Sbjct: 31  VERLSQDSLGRDPMSTEWTDEKHSLYLKSMEASFVDDLYNNFDLLGWRSQREQSLDPKFS 90

Query: 97  GQSQSASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKN 156
           GQ  +++ + S  GQFKVL+ G W N+NFE  ES+ +  +    +  NPWI HFR+AR+ 
Sbjct: 91  GQKHASTRMSS--GQFKVLQSGRWGNVNFEIHESQVDKADKSGVILANPWIRHFRSARRK 150

Query: 157 KNVACKSQ----------TIGSGGRNLSPFTAANNSGPMHTCESNLSQ-QYISSNKEVSD 216
           K +A                 SG   L+    A N      C S+L +   + SN EV+D
Sbjct: 151 KILASSFHQEKAAFGSLGVCASGKIALTSAALAVNLQQFSACRSHLRRYDSVDSNTEVTD 210

Query: 217 QNFVDEDREAEKGSSDCNGKRVKIPETNALINDQVVP 243
           QNFVDED E E  S  CN KR+K        NDQVVP
Sbjct: 211 QNFVDEDVEGENASHKCNAKRMKTSVVATPSNDQVVP 245

[Close]

BLAST of Cla97C05G101540 vs. TrEMBL
Match: tr|B9R7B9|B9R7B9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1590290 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 81/212 (38.21%), Postives = 123/212 (58.02%), Query Frame = 0


Query: 40  SSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQS 99
           + Q   MT+ + ++WTDEKH L+L+SMEASFV Q++++   +    +KE S         
Sbjct: 22  AQQELQMTEPISTEWTDEKHRLYLKSMEASFVKQLYNSMDDLDLQLKKEMSDPNL---SK 81

Query: 100 QSASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARK---- 159
           Q  S+  +  GQFK+LR G W+ INF+   S+ N+ N+   +  +PWI HFR+ARK    
Sbjct: 82  QVHSNKSTPSGQFKILRGGCWEKINFQRPASQVNIANEPSGVLISPWIRHFRSARKPQDI 141

Query: 160 -NKNVACKSQTIGSGGRNL---SPFTAANNSGP--MHTCESNLSQQYISSNKEVSDQNFV 219
             + +A ++Q I S G+ +      T    S P   ++C +      + SN EVSDQNFV
Sbjct: 142 VQERIALQNQAINSSGKKVVSGCTATCFKRSYPRRFYSCRNG----PVDSNTEVSDQNFV 201

Query: 220 DEDREAEKGSSDCNGKRVKIPETNALINDQVV 242
           DE+  + K +S C+ +R+K P+T A INDQ+V
Sbjct: 202 DENIRSGKKTSACSSERMKKPKTGAAINDQMV 226

[Close]

BLAST of Cla97C05G101540 vs. TrEMBL
Match: tr|A0A2R6RN23|A0A2R6RN23_ACTCH (Methyltransferase PMT5 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04723 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 93/239 (38.91%), Postives = 130/239 (54.39%), Query Frame = 0


Query: 16  TRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMF 75
           T + S  SE   D ++  +  VE  SQ + + DS+ ++WTDEKH L+L+SMEASFV  ++
Sbjct: 12  TPASSSTSEATADNASTDS--VERMSQNSLVRDSMSTEWTDEKHSLYLKSMEASFVDDLY 71

Query: 76  DTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLL 135
           ++   +G   ++E S   K  GQ  +++ + S  GQFKVL+ G W NINFE  ES+ +  
Sbjct: 72  NSLDLLGWRSQREQSPDPKFSGQKHTSTRMSS--GQFKVLQSGRWGNINFERHESQVDKG 131

Query: 136 NDYQALSHNPWIHHFRAARKNKNVAC----KSQTIG------SGGRNLSPFTAANNSGPM 195
           +    +  NPWI HFR+A + K +A     +    G      SG   L+    A N    
Sbjct: 132 DKAGVILANPWIRHFRSACRKKILASSILQEKAAFGSLGVRESGKMALTSAALAANLEQF 191

Query: 196 HTCESNLSQ-QYISSNKEVSDQNFVDEDRE-AEKGSSDCNGKRVKIPETNALINDQVVP 243
             C S L +   + S+ EVSDQNFVDE+ E  EK S  CN KR+K        NDQVVP
Sbjct: 192 PACHSYLRRYDSLGSDTEVSDQNFVDEEVEGGEKASRTCNAKRIKTSVVTNPSNDQVVP 246

[Close]

BLAST of Cla97C05G101540 vs. TAIR10
Match: AT5G42900.1 (cold regulated gene 27)

HSP 1 Score: 79.0 bits (193), Expect = 4.6e-15
Identity = 69/211 (32.70%), Postives = 107/211 (50.71%), Query Frame = 0


Query: 39  SSSQGTHMTDSLPSDWTDEKHHLFLESMEASFVSQMFDTEHSVGSCPRKENSSRTKLLGQ 98
           +SS  +   + + ++WT+EKH L+L+SMEASFV Q++   +S+G+  + EN S +   G 
Sbjct: 33  TSSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGS 92

Query: 99  SQSASHVHSHFGQFKVLRRGSWKNINFEPTESRSNLL---NDYQALSHNPWIHHFRAARK 158
            +  S       QFKVL  G W+ IN +  E R N     N ++ L  +PWI H++   K
Sbjct: 93  GRKPSQ-----EQFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFL-RSPWIKHYKPLVK 152

Query: 159 NKNVAC---KSQTIGSGGRNLSPFTAANNSGPMHTCESNLSQQYIS-SNKEVSDQNFVDE 218
            +       ++Q + S        ++ + S        +     IS    EVSDQNFV+E
Sbjct: 153 TQIPVTDEPENQVVSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNE 212

Query: 219 DREAEKGSSDCNGKRVKIPETNALINDQVVP 243
             + E GSS    K V + E+++   DQVVP
Sbjct: 213 GIKGENGSSK-KMKTVMMSESSS--TDQVVP 231

[Close]

BLAST of Cla97C05G101540 vs. TAIR10
Match: AT4G33980.2 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 35/124 (28.23%), Postives = 57/124 (45.97%), Query Frame = 0


Query: 7   NLENLKAVETRSDSLVSEFAKDESTEFALPVESSSQGTHMTDSLPSDWTDEKHHLFLESM 66
           +LE  + V   S    SE     S +  +  E+S           + WT+EKH+ +L+ +
Sbjct: 11  SLEKDRDVSEASAESQSESTLSNSLDSGVTAETSRSDADSKLDECTAWTNEKHNSYLDYL 70

Query: 67  EASFVSQMFDTEHSVGSCPRKENSSRTKLLGQSQSASHVHSHFGQFKVLRRGSWKNINFE 126
           E+SFV Q++     +G     +  SRT+        S+ H    QF VL+ G W+ +NF 
Sbjct: 71  ESSFVRQLYSL---LGG--GTQRLSRTR-----DVQSNSHKSADQFTVLQNGCWQKVNFG 124

Query: 127 PTES 131
             +S
Sbjct: 131 KKQS 124

The following BLAST results are available for this feature:

BLAST of Cla97C05G101540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935854.1	2.1e-106	83.47	uncharacterized protein LOC111442637 isoform X1 [Cucurbita moschata]	[more]
XP_022935855.1	2.7e-106	84.17	uncharacterized protein LOC111442637 isoform X2 [Cucurbita moschata]	[more]
XP_022976397.1	1.4e-105	82.57	uncharacterized protein LOC111476815 isoform X1 [Cucurbita maxima]	[more]
XP_022976398.1	1.8e-105	83.26	uncharacterized protein LOC111476815 isoform X2 [Cucurbita maxima]	[more]
XP_011654107.1	4.8e-103	80.17	PREDICTED: uncharacterized protein LOC101214397 isoform X3 [Cucumis sativus]	[more]

BLAST of Cla97C05G101540 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L0A2\|A0A0A0L0A2_CUCSA	1.3e-101	79.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639810 PE=4 SV=1	[more]
tr\|A0A1S3BU49\|A0A1S3BU49_CUCME	3.1e-98	82.96	uncharacterized protein LOC103493542 OS=Cucumis melo OX=3656 GN=LOC103493542 PE=...	[more]
tr\|A0A2R6Q063\|A0A2R6Q063_ACTCH	1.3e-27	39.63	Autophagy-related protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CE...	[more]
tr\|B9R7B9\|B9R7B9_RICCO	1.8e-26	38.21	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1590290 PE=4 SV=1	[more]
tr\|A0A2R6RN23\|A0A2R6RN23_ACTCH	2.4e-26	38.91	Methyltransferase PMT5 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00...	[more]

BLAST of Cla97C05G101540 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G101540 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42900.1	4.6e-15	32.70	cold regulated gene 27	[more]
AT4G33980.2	2.8e-04	28.23	FUNCTIONS IN: molecular_function unknown	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold
biological_process	GO:0080167	response to karrikin
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G101540.1	Cla97C05G101540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33676:SF3	COLD REGULATED PROTEIN 27	coord: 31..242
None	No IPR available	PANTHER	PTHR33676	FAMILY NOT NAMED	coord: 31..242

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G101540	Cla020671	Watermelon (97103) v1	wmwmbB207
Cla97C05G101540	MELO3C016754	Melon (DHL92) v3.5.1	mewmbB485
Cla97C05G101540	CSPI04G24090	Wild cucumber (PI 183967)	cpiwmbB316
Cla97C05G101540	Cucsa.352200	Cucumber (Gy14) v1	cgywmbB602
Cla97C05G101540	CmaCh01G018380	Cucurbita maxima (Rimu)	cmawmbB479
Cla97C05G101540	CmoCh01G018970	Cucurbita moschata (Rifu)	cmowmbB461
Cla97C05G101540	CmoCh09G002210	Cucurbita moschata (Rifu)	cmowmbB014
Cla97C05G101540	Lsi04G015620	Bottle gourd (USVL1VR-Ls)	lsiwmbB288
Cla97C05G101540	MELO3C016754.2	Melon (DHL92) v3.6.1	medwmbB477
Cla97C05G101540	Carg10605	Silver-seed gourd	carwmbB0807
Cla97C05G101540	Carg27330	Silver-seed gourd	carwmbB0869
Cla97C05G101540	CsaV3_4G034340	Cucumber (Chinese Long) v3	cucwmbB314
Cla97C05G101540	Bhi09G002730	Wax gourd	wgowmbB579

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G101540	Watermelon (97103) v2	wmbwmbB142
Cla97C05G101540	Silver-seed gourd	carwmbB0187
Cla97C05G101540	Cucumber (Gy14) v2	cgybwmbB127
Cla97C05G101540	Cucumber (Gy14) v2	cgybwmbB290
Cla97C05G101540	Cucumber (Gy14) v1	cgywmbB674
Cla97C05G101540	Cucurbita maxima (Rimu)	cmawmbB026
Cla97C05G101540	Cucurbita maxima (Rimu)	cmawmbB183
Cla97C05G101540	Cucurbita maxima (Rimu)	cmawmbB820
Cla97C05G101540	Cucurbita moschata (Rifu)	cmowmbB166
Cla97C05G101540	Cucurbita moschata (Rifu)	cmowmbB793
Cla97C05G101540	Wild cucumber (PI 183967)	cpiwmbB137
Cla97C05G101540	Cucumber (Chinese Long) v3	cucwmbB137
Cla97C05G101540	Cucumber (Chinese Long) v2	cuwmbB135
Cla97C05G101540	Cucumber (Chinese Long) v2	cuwmbB305
Cla97C05G101540	Bottle gourd (USVL1VR-Ls)	lsiwmbB435
Cla97C05G101540	Melon (DHL92) v3.6.1	medwmbB277
Cla97C05G101540	Melon (DHL92) v3.5.1	mewmbB293
Cla97C05G101540	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G101540	Watermelon (Charleston Gray)	wcgwmbB327
Cla97C05G101540	Watermelon (97103) v1	wmwmbB091
Cla97C05G101540	Wax gourd	wgowmbB301