Carg27330 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27330
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Non-specific serine/threonine protein kinase
Location	Cucurbita_argyrosperma_scaffold_549 : 28741 .. 31197 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGTCGCCATTACAAATCTGGAGAGATTATCATTCATCCTCTTGAGCATTCATGGAGTTGTTGCCTCCAAATTTGGAGAATCACAACGCCGTAGAAACTCGGACCGACTCACTCATCTCTGAATTGGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCTGGTACTTACCCTACTTTCTTCCTCTTATCTTCGTTTTAGATGTTCTTGTTGTTCCAATTAGGTTTTGCTTCTGTAATGTTTGGTATCTTCAATTTCATGCTCTGTGACCGTGACTGCATTGTTTCTCTATTTTCGTGTTAAAACTTAAAAGATACGAAATAAAAATAGAAAGTAAGAGGACGTGGAAGAAGACAGCGATGGTTTTGCACTTCCCTCTCGTGACTGGAGGATCTTTATTTTATATTTTGTCTGGCTCTGTTCGGATCGATATCGTTCTTTGTCGATGGAATTTGTAGGGCTGTGCAAGGGGCTTGGATCTGTGGCCAATGATTCTGGAAACTCAGCACGAGTTCTGATTGTTCAACATTATCATTTCAAATTAAGATGACTAATCGTATTGTTTATCAGTTATTTATTAAGATAGACCATGAATGAATGGTTGGAAGAGGAGTTCGACTAATTAAGGGGTCGATCATGAGTTTATAAGTAAGAAATACGTATCCATTGGTACGAGGCCTTTTGAAAACCAAAATCAAAATCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGGAGTTCGTGGTTCCTAACGTGATATTAGAGTCGTGTCTTTAACTTAACTATGTAGATAGAATCCTCAAATGTCGAGCAAAGAAGTTATGAGGTTCGAATGCGTAGTCAAAAGTGACTCAAGTGTCAAACAAAGAGTGTACTTTGTTTGAGGGCTCTAGAGAAGGAGTTGAACATTGATTACGGAGAGGCTGTTCGAGGGCTCCATAGGCCTCAGGAGAGGCTCTATGGTATACTTTGTTCGATGGGAGGATTGTTGAAGATTGTTGGAAGAGGAATCTCACATCGACTAATTAAGGGGTTGATCATGAGTTTATAAGTAAAGAATATATCTCTATTGGTACAAGACACTTTTTGGAAAATCAAAAGCAAAGTCAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATATTATCATTGTGGGGTTTGTGGTTCCTAACAGAACTTGCCATGAAAATTACTGATAATGCGATTTCGTTTCAGGGCACTCATATGACGGATTCTGTACCTTCTGATTGGACCGATGAGAAGCACCATTTATTCCTTGAATCCATGGAGACATCTTTTGTCAGCCAAATGTTTGATTCTGTGCATTCAGTTGGTTCCTGCCCCCGCAAGGAAAATTCTTCACACACAAAATTGCACGGCCAAAGCCAATCCGCCTCTCATGTCCATTCACATTTTGGCCAGGTTCAATGCCGATTGATCTTTGTAGATGAGTTATAACTCTCTTCTGATAATGGCTTATAAATTCTCTTTTTATTCTTTTCGTTGCTTCTATCTATGCAGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAAACAACTGAATCTCGGTCGAATTTATTGAATGATTTCCAAGCTCTCTCACGTAATGCTTGGATACATCACTTTCGAGCTGATCGTAAAAACAAAAATGTTGCATGCAAAAGTCAAGCTATCGGTTCAGGAGGAAGGAATTTGTTTCCTTTAGGAGCAGCAAATGATTCAGAACCTTTGCGTGCTTGTGATTCTGATTTCTCCCTACAATATATCAGCAGCAATGAAGGTATAATCTTTGTGTCTTCGACGTAATAAATGATTAATTATCAATATTTGATTGATAGATTTGGCCTCTCCTAGCTTGTAATTTAGTTTATCAAGTTTAAGTTCGCTAGTTAGTGATTCTACGTTCAATTATGATTTTAAATGTAAATTGTACATAAATCATCATTTCCCTGATGCAAGACTGAACTATTTTAGATGATAAAGACTGTTTTGATTTTAATCTGCACAAATGATTTTCATGTTGCAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGTTGGAAACGGGAGCAGTGATTGCAGCAATGCCAAAAGGGTCAACACTCCAGAGACCAATGCCTTGATCAATGAACAGGTAATTCATATGATATCAACTTAACCACCATCTCTTGCTCCAGAATGATGACCTCTGATTTCTTTTAGGTTGTTTCCTAAGTTCCATGAAAATGAGATTATCATTTTTAACAAAAATTCTATTACAGCCAGAAGATAGCTAGATCCCAGATTGTCGCCAATACGAGGCAGACGACTTATCGACTACTCTTTTAACTCCGGGAAAGGCTATAGATGATCTGAGATTGTTGGTGAAGTCTATAATGCTCATTTTGAGGTTATTGGTTTCTGTTGATTA

mRNA sequence

TCTGTCGCCATTACAAATCTGGAGAGATTATCATTCATCCTCTTGAGCATTCATGGAGTTGTTGCCTCCAAATTTGGAGAATCACAACGCCGTAGAAACTCGGACCGACTCACTCATCTCTGAATTGGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCTGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAAACAACTGAATCTCGGTCGAATTTATTGAATGATTTCCAAGCTCTCTCACGTAATGCTTGGATACATCACTTTCGAGCTGATCGTAAAAACAAAAATGTTGCATGCAAAAGTCAAGCTATCGGTTCAGGAGGAAGGAATTTGTTTCCTTTAGGAGCAGCAAATGATTCAGAACCTTTGCGTGCTTGTGATTCTGATTTCTCCCTACAATATATCAGCAGCAATGAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGTTGGAAACGGGAGCAGTGATTGCAGCAATGCCAAAAGGGTCAACACTCCAGAGACCAATGCCTTGATCAATGAACAGCCAGAAGATAGCTAGATCCCAGATTGTCGCCAATACGAGGCAGACGACTTATCGACTACTCTTTTAACTCCGGGAAAGGCTATAGATGATCTGAGATTGTTGGTGAAGTCTATAATGCTCATTTTGAGGTTATTGGTTTCTGTTGATTA

Coding sequence (CDS)

ATGGAGTTGTTGCCTCCAAATTTGGAGAATCACAACGCCGTAGAAACTCGGACCGACTCACTCATCTCTGAATTGGCCAAGGACGAGTCGACCGAGTTTGCCCTCCCGGTGGAATCTTCTAGCCTGTTTAAAGTTCTTCGACGAGGCAGCTGGAAGAACATTAATTTTGAAACAACTGAATCTCGGTCGAATTTATTGAATGATTTCCAAGCTCTCTCACGTAATGCTTGGATACATCACTTTCGAGCTGATCGTAAAAACAAAAATGTTGCATGCAAAAGTCAAGCTATCGGTTCAGGAGGAAGGAATTTGTTTCCTTTAGGAGCAGCAAATGATTCAGAACCTTTGCGTGCTTGTGATTCTGATTTCTCCCTACAATATATCAGCAGCAATGAAGAAGTGTCAGATCAGAATTTTGTTGATGAAGATAGAGAAGTTGGAAACGGGAGCAGTGATTGCAGCAATGCCAAAAGGGTCAACACTCCAGAGACCAATGCCTTGATCAATGAACAGCCAGAAGATAGCTAG

Protein sequence

MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSLFKVLRRGSWKNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAANDSEPLRACDSDFSLQYISSNEEVSDQNFVDEDREVGNGSSDCSNAKRVNTPETNALINEQPEDS

Homology

[Close]

BLAST of Carg27330 vs. NCBI nr
Match: XP_022935855.1 (uncharacterized protein LOC111442637 isoform X2 [Cucurbita moschata])

HSP 1 Score: 310.8 bits (795), Expect = 2.9e-81
Identity = 173/244 (70.90%), Postives = 173/244 (70.90%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL------------------ 60
           MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL                  
Sbjct: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  ---------------------------------------------------FKVLRRGSW 120
                                                              FKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHSHFGQFKVLRRGSW 120

Query: 121 KNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 176
           KNINFETTESRSNLLNDFQALSRN WIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

[Close]

BLAST of Carg27330 vs. NCBI nr
Match: XP_022935854.1 (uncharacterized protein LOC111442637 isoform X1 [Cucurbita moschata])

HSP 1 Score: 303.1 bits (775), Expect = 6.0e-79
Identity = 169/240 (70.42%), Postives = 169/240 (70.42%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL------------------ 60
           MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL                  
Sbjct: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  ---------------------------------------------------FKVLRRGSW 120
                                                              FKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHSHFGQFKVLRRGSW 120

Query: 121 KNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 172
           KNINFETTESRSNLLNDFQALSRN WIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

[Close]

BLAST of Carg27330 vs. NCBI nr
Match: XP_022976398.1 (uncharacterized protein LOC111476815 isoform X2 [Cucurbita maxima])

HSP 1 Score: 291.2 bits (744), Expect = 2.3e-75
Identity = 166/244 (68.03%), Postives = 168/244 (68.85%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL------------------ 60
           MELLPPNLENH AVETRTD LISEL KD+STEFALPVESSSL                  
Sbjct: 1   MELLPPNLENHIAVETRTDLLISELPKDDSTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  ---------------------------------------------------FKVLRRGSW 120
                                                              FKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHAHFGQFKVLRRGSW 120

Query: 121 KNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 176
           KNINFETTESRSNLLNDFQALSRN WIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

[Close]

BLAST of Carg27330 vs. NCBI nr
Match: XP_022976397.1 (uncharacterized protein LOC111476815 isoform X1 [Cucurbita maxima])

HSP 1 Score: 283.5 bits (724), Expect = 4.9e-73
Identity = 162/240 (67.50%), Postives = 164/240 (68.33%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL------------------ 60
           MELLPPNLENH AVETRTD LISEL KD+STEFALPVESSSL                  
Sbjct: 1   MELLPPNLENHIAVETRTDLLISELPKDDSTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  ---------------------------------------------------FKVLRRGSW 120
                                                              FKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHAHFGQFKVLRRGSW 120

Query: 121 KNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 172
           KNINFETTESRSNLLNDFQALSRN WIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN
Sbjct: 121 KNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 180

[Close]

BLAST of Carg27330 vs. NCBI nr
Match: XP_023535202.1 (uncharacterized protein LOC111796695 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.4 bits (716), Expect = 4.1e-72
Identity = 164/245 (66.94%), Postives = 167/245 (68.16%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL------------------ 60
           MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSL                  
Sbjct: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSLGTHMTDSVPSDWTDEKHH 60

Query: 61  ---------------------------------------------------FKVLRRGSW 120
                                                              FKVLRRGSW
Sbjct: 61  LFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHVHSRFGQFKVLRRGSW 120

Query: 121 KNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 176
           KNINFETTESRSNLLND+QALSRN WIHHFRADRKNKNVA KSQAI SGGRNLFPLGAAN
Sbjct: 121 KNINFETTESRSNLLNDYQALSRNPWIHHFRADRKNKNVASKSQAISSGGRNLFPLGAAN 180

[Close]

BLAST of Carg27330 vs. TAIR10
Match: AT5G42900.1 (cold regulated gene 27)

HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04
Identity = 42/131 (32.06%), Postives = 62/131 (47.33%), Query Frame = 0


Query: 29  ESTEFALPVE-SSSLFKVLRRGSWKNINFETTESRSNLLN--DFQALSRNAWIHHFRADR 88
           EST F    + S   FKVL  G W+ IN +  E R N  +  +     R+ WI H++   
Sbjct: 83  ESTRFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLV 142

Query: 89  KNKNVAC---KSQAIGS--GGRNLFPLGAANDSEPLRACDSDFSLQYISSNEEVSDQNFV 148
           K +       ++Q + S  G + +   G+A+  + L +   D   Q      EVSDQNFV
Sbjct: 143 KTQIPVTDEPENQVVSSSNGKKGICSSGSASSLKQLSSHSRDHD-QISVGEAEVSDQNFV 202

Query: 149 DEDREVGNGSS 152
           +E  +  NGSS
Sbjct: 203 NEGIKGENGSS 212

[Close]

BLAST of Carg27330 vs. TrEMBL
Match: tr|A0A0A0L0A2|A0A0A0L0A2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639810 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 9.2e-52
Identity = 127/240 (52.92%), Postives = 140/240 (58.33%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSS------------------- 60
           MELLPPNL++ N  ETR DSL+SE  KD+STEF+ P+ESSS                   
Sbjct: 77  MELLPPNLDSLNPRETRADSLVSEFVKDQSTEFSRPIESSSRGTHMTDSVPSDWTDEKHH 136

Query: 61  --------------------------------------------------LFKVLRRGSW 120
                                                              FKVLRRGSW
Sbjct: 137 LFLESMEASFVSQMFDSGHSVGSCPTKDNSSRTKLLSKSQSASHGHSQFGQFKVLRRGSW 196

Query: 121 KNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 172
           KNINFE TESRSN LN++QALS N WIHHFRA RKNKNV CKSQAIGS GRN   LGAAN
Sbjct: 197 KNINFEPTESRSNFLNEYQALSHNPWIHHFRAARKNKNVVCKSQAIGSRGRNSLSLGAAN 256

[Close]

BLAST of Carg27330 vs. TrEMBL
Match: tr|A0A1S3BU49|A0A1S3BU49_CUCME (uncharacterized protein LOC103493542 OS=Cucumis melo OX=3656 GN=LOC103493542 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.2e-44
Identity = 112/223 (50.22%), Postives = 125/223 (56.05%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSS------------------- 60
           MELLP NL+N N+ E R+DSL+SE  KD STEF  P+ESSS                   
Sbjct: 1   MELLPRNLDNLNSREARSDSLVSEFVKDGSTEFCRPIESSSRGTHMTDSVPSDWTDEKHH 60

Query: 61  --------------------------------------------------LFKVLRRGSW 120
                                                              FKVLRRGSW
Sbjct: 61  LFLESMEASFVSQMFDSGHSVGSCPSKDNSSRTKLLSKSQSASHVHSHFGQFKVLRRGSW 120

Query: 121 KNINFETTESRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPLGAAN 155
           KNINFE TESRSN LN++QALS N WIHHF+A RKNKNVACKSQAIGS GRN   L AAN
Sbjct: 121 KNINFEPTESRSNFLNEYQALSHNPWIHHFKAARKNKNVACKSQAIGSRGRNSLSLEAAN 180

[Close]

BLAST of Carg27330 vs. TrEMBL
Match: tr|A0A2G5DS09|A0A2G5DS09_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01500057v1 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12
Identity = 59/147 (40.14%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 40  SSLFKVLRRGSWKNINFETTESRSNLLNDFQALSRNAWIHHFRADRKN---------KNV 99
           SS FKVLR G WK INFE+ + + N  ++ + L  N WI HFR+  K+         +N 
Sbjct: 100 SSQFKVLRSGCWKKINFESAQPKMNTADESRVLVENQWIRHFRSADKHQELSMSSSQENG 159

Query: 100 ACKSQAIGSGGRNLFPLGAANDSEPL--RACDSDFSLQ----YISSNEEVSDQNFVDEDR 159
           AC S++I S  R      AA+  EPL  +   + +  Q    YIS + EVSDQNF DED 
Sbjct: 160 ACSSESIFSTDRQ----NAASYKEPLCTKKLQAGYCHQRDQDYISCSTEVSDQNFADEDN 219

Query: 160 EVGNGSSDCSNAKRVNTPETNALINEQ 172
           E     SD   AK++ T +T  LI +Q
Sbjct: 220 E-NKHISDHVKAKKMKTADTGVLIKDQ 241

[Close]

BLAST of Carg27330 vs. TrEMBL
Match: tr|B9R7B9|B9R7B9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1590290 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.6e-11
Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 40  SSLFKVLRRGSWKNINFETTESRSNLLNDFQALSRNAWIHHFRADRK-----NKNVACKS 99
           S  FK+LR G W+ INF+   S+ N+ N+   +  + WI HFR+ RK      + +A ++
Sbjct: 88  SGQFKILRGGCWEKINFQRPASQVNIANEPSGVLISPWIRHFRSARKPQDIVQERIALQN 147

Query: 100 QAIGSGGRNLFPLGAA---NDSEPLR--ACDSDFSLQYISSNEEVSDQNFVDEDREVGNG 159
           QAI S G+ +     A     S P R  +C +      + SN EVSDQNFVDE+   G  
Sbjct: 148 QAINSSGKKVVSGCTATCFKRSYPRRFYSCRNG----PVDSNTEVSDQNFVDENIRSGKK 207

Query: 160 SSDCSNAKRVNTPETNALINEQ 172
           +S CS ++R+  P+T A IN+Q
Sbjct: 208 TSACS-SERMKKPKTGAAINDQ 224

[Close]

BLAST of Carg27330 vs. TrEMBL
Match: tr|A0A059BJZ5|A0A059BJZ5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00223 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.9e-10
Identity = 60/173 (34.68%), Postives = 83/173 (47.98%), Query Frame = 0


Query: 1   MELLPPNLENHNAVETRTDSLISELAKDESTEFALPVESSSLFKVLRRGSWKNINFETTE 60
           MELL  +LE  N ++ +T  +              P   S  FKVLR GSWK I FE   
Sbjct: 64  MELLGWHLEKANFLDPQTRQISKH-----------PYSPSGQFKVLRDGSWKKIGFERPH 123

Query: 61  SRSNLLNDFQALSRNAWIHHFRADRKNKNVACKSQAIGSGGRNLFPL--GAANDSEPLRA 120
            +    +  + L ++ WI HFR   +   +   S  IGS G+    L   +A + E   A
Sbjct: 124 LQVEKADGSRDLVKSPWIQHFRPASRLPRLG--SPKIGSSGKGKKSLAYASAGNPEQFHA 183

Query: 121 CDSDFSLQYISSNEEVSDQNFVDEDREVGNGSSDCSNAKRVNTPETNALINEQ 172
           C S F  Q  +SN EV+ QNFVDED   G   S+  +AK+  T  T++  N+Q
Sbjct: 184 CHSYFGNQVDNSNAEVTGQNFVDEDIG-GRKGSNIGSAKKAKTLGTDSSDNDQ 222

The following BLAST results are available for this feature:

BLAST of Carg27330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935855.1	2.9e-81	70.90	uncharacterized protein LOC111442637 isoform X2 [Cucurbita moschata]	[more]
XP_022935854.1	6.0e-79	70.42	uncharacterized protein LOC111442637 isoform X1 [Cucurbita moschata]	[more]
XP_022976398.1	2.3e-75	68.03	uncharacterized protein LOC111476815 isoform X2 [Cucurbita maxima]	[more]
XP_022976397.1	4.9e-73	67.50	uncharacterized protein LOC111476815 isoform X1 [Cucurbita maxima]	[more]
XP_023535202.1	4.1e-72	66.94	uncharacterized protein LOC111796695 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg27330 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42900.1	3.4e-04	32.06	cold regulated gene 27	[more]

BLAST of Carg27330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg27330 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L0A2\|A0A0A0L0A2_CUCSA	9.2e-52	52.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639810 PE=4 SV=1	[more]
tr\|A0A1S3BU49\|A0A1S3BU49_CUCME	9.2e-44	50.22	uncharacterized protein LOC103493542 OS=Cucumis melo OX=3656 GN=LOC103493542 PE=...	[more]
tr\|A0A2G5DS09\|A0A2G5DS09_AQUCA	1.9e-12	40.14	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01500057v1 PE=4...	[more]
tr\|B9R7B9\|B9R7B9_RICCO	4.6e-11	38.03	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1590290 PE=4 SV=1	[more]
tr\|A0A059BJZ5\|A0A059BJZ5_EUCGR	3.9e-10	34.68	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F00223 PE=4 SV...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27330-RA	Carg27330-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27330	Cla020671	Watermelon (97103) v1	carwmB0836
Carg27330	MELO3C016754	Melon (DHL92) v3.5.1	carmeB0829
Carg27330	CSPI04G24090	Wild cucumber (PI 183967)	carcpiB0875
Carg27330	Cucsa.352200	Cucumber (Gy14) v1	carcgyB0961
Carg27330	CmaCh01G018380	Cucurbita maxima (Rimu)	carcmaB1159
Carg27330	CmoCh01G018970	Cucurbita moschata (Rifu)	carcmoB1129
Carg27330	CmoCh09G002210	Cucurbita moschata (Rifu)	carcmoB1128
Carg27330	Lsi04G015620	Bottle gourd (USVL1VR-Ls)	carlsiB762
Carg27330	MELO3C016754.2	Melon (DHL92) v3.6.1	carmedB0841
Carg27330	CsaV3_4G034340	Cucumber (Chinese Long) v3	carcucB0879
Carg27330	Cla97C05G101540	Watermelon (97103) v2	carwmbB0869
Carg27330	Bhi09G002730	Wax gourd	carwgoB0973

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg27330	Carg10605	Silver-seed gourd	carcarB607

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27330	Cucumber (Chinese Long) v2	carcuB0855
Carg27330	Watermelon (Charleston Gray)	carwcgB0809
Carg27330	Cucumber (Gy14) v2	carcgybB0829
Carg27330	Cucurbita maxima (Rimu)	carcmaB1158
Carg27330	Cucurbita pepo (Zucchini)	carcpeB1167
Carg27330	Cucurbita pepo (Zucchini)	carcpeB1168