Cla97C05G093970 (gene) Watermelon (97103) v2

Overview
NameCla97C05G093970
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 14313178 .. 14317867 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCTTAAGATTCAAGAAGACTCAGCTCTGAATAGGTGTGTTGCTTTTACTTTTATCCATTTTCTTATTATTGAGAAATTTATTTTGCAGGTTTGAAATACTAAAACCACCTCGCACATCCTTCCCTTCCTGCAGAAGGTCCGTAGCTTCAGTTTTGACTAGTTGCCTACAACTACAAAGAAGAACTAGAACTCTCTCTAAGAAAAGCACCAAAATGGCCTATGTTTGCAACGAACTACCAAACTTCCTCATTTTTTTGGTAGAGCTTAAAGGGGACGGGGCTACTTTGACTAATTCATAAGAAGTATTATGCAATCGGAAATTCAGAATTATGAAGCCTTTAAATATTAGGCTTTAGTTTTGGGGACTAGGAACATTTTCATTGTCCATCTTATTAAATTTTACTTCTACTATTCTTTAGAAGATTGCTAAAGGAAGTGGAAATTGTGAACTTTAAAGCTCTTCTTGAGGTTCTTCGGTTAGCTAAACCTGGTTCTGGAATTGACTCAAGGAAATGGAGTTTAGAAGACTCGGGCTGTTTTCAGTCAAATCCCTTTCCAGCAAGTTAAATGTCTCTTCCCTCTACCGAAGGAGATTTTTTCAGCTCTCTGGAAGTCCTGCAGCCCAATAAGAACCTCGATTTTATCTTGGATTTTGATAAATAGTATCTTAACACAGGCGACGTTCTTCAGAGAAAATTAGCCACTTCTTGTTTGCAGCCCTCAATTTGCTTTTTATGTCAAGCACACTAGGAAAGCTTTAACCATGTTCTGATTGTTCTTTCTCTCAAGTTTGTTGGCTGTGCCTTTTCAACATTTTCAGCTTGCATTGGGTTCTTGACTCAAGGGTGAAAGATAATATTATTCAGCTACTGGGGGTTCCTCTTTTCTCCCAAAAGGCTCACTTACTTTGCGTAGATGCAGTGAAAGCTCTCCTCTCTAGCATATGGATGGAAAGAAACCAACGAATTTTTGAAGATAAATATAGCTCTTGGGTGGATGTCTTTGATTCAGCTTGTTGCAATGCCTCACTTTGGTGCTCTTTACTTAAATCTTTTGAGGGATATACTCTCTTCAAGATATTGTTTTAAATTGGGTCGTTTTTGTTGATGCTTAATACAACCTGTTTACTTCTTTATTTATACCTTTTCTTTGGTATTGTATTTTTTATCTGTTACTAGTACTTCACTCCCTCGTGGAGTTTGTTTCCTATGAGCATTAGTCTCTTTTCATTGCATCAATGAAAAGTTGTCTCTTGTTCAAAGAAAGAAAAAAAAAGTAACCCTTACAAAGCTTACTTTTCTATCTCAAAAGGATAGGTCTACCAATCACTTCATCAAAGTGGAATCTATGTCTTTTAGGATTTCTTTTGATGAATGATTTAGGGGAAGAGTCAAAATTGAGGAAAAAGGGAGTAATGTGGTTCTATTTCTGTTCAACTGGTTTCAGTTATCTAGAATGAGAACTGTCTATGGTGTATGCTAGATAAATCTAAAAGTAACCTATTCTTTAGACGAACAAGGTATAACAATTAGATATCTTTATCAGATTACATATTATTGTTGGAGTGAAAATTTAGTATTTTCTATGGTGGGGAAATGAAGACATGAAGAGATTCTATGATCCTCGTTAGAAACTTTCCATGAAGATGCAGACATTGCTTTTCTTGAACAAGAGACGAAACTTTTCATTGAGACGATAGAGGTTTTGACACTCCTTTCTTTACTAGGAGAGGTCGAACTAAGACAGGGGAGAAAAGATGTTTGTATTTGGAGCCTTAGCCTCTTTGAAGGCTTTGCCTGTTGATTGTTTCCCGATATTTGCTGGATTCATCTCCTCCTAGGGAGTTCATTTTCTCGCTCCTTTGGAAGGTGAAAATCCTAAAATAAGGTGAAGTTCTTTGTTTGGCAGGTTGTTCATGAAAAAATCAATACCTTGGAGAGACTCATGAGGAAGTTACTGTTCTTGGTTGTGGGCCTTTTTGGGATAATAATTTACTTTGGAGGTGTGACTATGCTAGATCAGTTTGGAATTTCTTCTTTAAGATGTTTGGCTTTCAGGCAGCCTGCCACATAGCAGTTAGTTATGGTTGGCTGGTTTGTGTGTGTTGTTATGGTGTATTTGGAGCACCAGAAATAATAGATGACATTTTTGGTATCATTCTAGGGTGGTGGTCCATTGAGAGTTTTAAGAGGAAGAAGAGGGAAGCTAAAGCCAAAAAGAAAAAAAAAGTTGTATCATGAGAGCATTTTGCCAATAAAATTTGATGTGGTTGGTAAGTTGATATGTTTTAAGGCTGCATCTTTAATTCTTTTTCAATAGTCCAATTCCAAAGAAGCAGACAAAAACTGATGTTAGCAAATGGCAAGGTGCTATGGGGTTCAATACACTTCCATTTCCTTGCCCTATGAAATTTAGGTACATGTTTTTAAAAAGAGGTTATTTTGGTGCATCGCATTTTAGTGATTTACTTTGTATATCTAGTATTCTCTTTAATTACGATTTCATCTTCCTCTTACTAATCTTGATTCGGTGGAGGTGGTGGGCCTTCTTTCTTTTGTTTTTGATCAGATTTTAGGGAGAAGGGATACTTGGGCCTGGGAGCCTAACCTACTAGAGGGCTTCTTTTGTTAATCTTTCTTTCGTATCTATTGTTCCTGTTCTCGCATCCTAGGGGCCTCAGTTTCTTCCTCTCTCTGGAAGGTTAAAATTCCTCAAAAATTAAAATTCTATGCCTGGCATCTGTTACATGGGAGTGTGAACTCTGAGGATCACATTAGCGGTAATTTTCCTTGGTGTTGCATCCGTAGTGGTGTGTACTTCCTAGATAGTCAAAGGAAAATCTTGATCCTCTTCTTTGGGGGTGCCATTTCTCTTACTCCCTATAGAGGCCCAGCTTTAGATCATTTGGGGCGGCCTTGGTGTCTCCTTGAGGTTGGTGGAGATCTTGATGAATTCTCCTTGTCACCATAAAAGGGAGAGTTTTATGATGGAGCTTCCTCTTTTTCCCCCAATTTGTTCCTAATGTGGTGGGTGATGGGCGAGATACTTATTTTTAGAAGGATATGTGGTTGGGTATAGACTCGCCTGGCTTCAACTCGTGATTGGGTGAATTTGCCACCCTTTTTCCTTCTTTGAGTTTCTGGCAGTCATTGACCAATCGGAAATGTTGAATGTCTTGGCTCTTTTATCATCGCTCTCCTTTTTTCACCTTAGGCCTAGGAGGGGGGATGGACACCTTTGGACACTTCGTCTGTCCAAAGGTTTTTCACGTATCTTTTTCTTCTAGTCTTTAGGCAACCCTTCTTTGGTGGTCATTCTTTATTCTCCTCGATATGGTACGTAAAAATTACCAAGAAAGTAAAGTTCTTTGCGCGACAAGTTTAGCATGGATTAGTTGGGTCGGATTTTGGCCATAGGGTGATAGAGGACCTGGATCCGATCATGTGGAGTTATGAGTATACTCTGTGGTCTAGCACGAGTTCTTTGAGGCGTTTGATTTTAGCTTTGTTAGCTCTTGGAGTTGCAGGGAGTCGGTTGAGGAGCTTATCCTCCATCTACCATTTTATGAAAAAATTGTGGTTTTTGTGGCAGGCTGGGATCTTTCTAATCTTGTGGGGGTTGTGGGCTGAAAGAAACAATAGAATCTTCAAAGGATGTGAGAGTTCTTATAGCAATGTGTAGTCTCTTGCTAGATTCTCTAGGCTTCTATTTCCAAGTATTTTTTTTAATTACTCGTTAGGTCTTATTTCTCTTGATTGGAACCATTTTTTTTGTAGTTTTGACTCCCCTTTTTGGTTTTTTTTTTTGTATGTCCATGTATTCTTTCATTTTTTTCTCAATGCAAGTCGAGTTTGTTTTTTTCCCCAAAACAGATTTAGAGAGTTTTGTGGCAGGCTGGTTGTTTTGCTATTTTGTGGGGAGTGGCTCAAGCCGAATGGAAGGATTTTTAGAGGGGTTGAGAAGAGGTCTTTGGAGGAGGTGGTGTGGGAGGTATTGAGGTTCAATGCGTCTTTAGGAGTGTCCATTAATCCTTTTTTTTTTTTTCTTGTCATTATCGACTTAATGTCATTCTTTGAATTGAACTTTTTTTCTTCCTAATTTGTATGCTTTTGTATATTCTTTCATGTTTCTGAAAGCTTGGTTTCTTATCCGACATCCTTTTCATCTTTTTCATTGCGGTCTACTTGTAAAGCTTATAGGGACTTTTATCTGTTTTATTTCCATATTATTTTCGCTATTTTGCTGCTACTGGTGGTTTAGAACATGTTATGTAGTGAATGTGCTCGTTGCTAAGTTATCTTTGAAAGAGTGGATCTAATTTGCTTTGAGAGGTGCAAATTCTCTTTCAATTTTAACTAATTTTTGCTCCAATATGAGTTCCCAATCTCCCTGACTTTATTTTGCAATAGGATTATCTAATATTGTTGTTTGTGTTAATGAGATTTGTGGTATATGGCATAGGACCACACTTGGGAATATGCTTTTATGGAGTTCCTGAAGATGGAAGAGTCTTTCAACAGTATAAAGCCACTCCTTTGCTGTGTTGCCTTGACCTTGCATCCACGAGCTGCAAGACAAGTTTGGGGCCAAGGGACGAGCATGCTAGCTGTTGGTTCATCTGTTTTGTCGCATCGTTGGTTCAACTAGCAGAAAGAATATCGGATATTTCTGACCCACTGTCATGA

mRNA sequence

ATGGTGCTTAAGATTCAAGAAGACTCAGCTCTGAATAGGTGTGTTGCTTTTACTTTTATCCATTTTCTTATTATTGAGAAATTTATTTTGCAGGATTATCTAATATTGTTGTTTGTGTTAATGAGATTTGTGGTATATGGCATAGGACCACACTTGGGAATATGCTTTTATGGAGTTCCTGAAGATGGAAGAGTCTTTCAACAGTATAAAGCCACTCCTTTGCTGTGTTGCCTTGACCTTGCATCCACGAGCTGCAAGACAAGTTTGGGGCCAAGGGACGAGCATGCTAGCTGTTGGTTCATCTGTTTTGTCGCATCGTTGGTTCAACTAGCAGAAAGAATATCGGATATTTCTGACCCACTGTCATGA

Coding sequence (CDS)

ATGGTGCTTAAGATTCAAGAAGACTCAGCTCTGAATAGGTGTGTTGCTTTTACTTTTATCCATTTTCTTATTATTGAGAAATTTATTTTGCAGGATTATCTAATATTGTTGTTTGTGTTAATGAGATTTGTGGTATATGGCATAGGACCACACTTGGGAATATGCTTTTATGGAGTTCCTGAAGATGGAAGAGTCTTTCAACAGTATAAAGCCACTCCTTTGCTGTGTTGCCTTGACCTTGCATCCACGAGCTGCAAGACAAGTTTGGGGCCAAGGGACGAGCATGCTAGCTGTTGGTTCATCTGTTTTGTCGCATCGTTGGTTCAACTAGCAGAAAGAATATCGGATATTTCTGACCCACTGTCATGA

Protein sequence

MVLKIQEDSALNRCVAFTFIHFLIIEKFILQDYLILLFVLMRFVVYGIGPHLGICFYGVPEDGRVFQQYKATPLLCCLDLASTSCKTSLGPRDEHASCWFICFVASLVQLAERISDISDPLS
Homology
[Close]
BLAST of Cla97C05G093970 vs. NCBI nr
Match: KGN57721.1 (hypothetical protein Csa_3G259710 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 2.7e-17
Identity = 57/111 (51.35%), Postives = 60/111 (54.05%), Query Frame = 0 

Query: 1   MVLKIQEDSALNRCVAFTFIHFLIIEKFILQDYLILLFVLMRFVVYGIGPHLGICFYGVP 60
           M LK+Q DSALNR                                      LGICF GV 
Sbjct: 1   MALKVQGDSALNRTTL-----------------------------------LGICFNGVL 60

Query: 61  EDGRVFQQYKATPLLCCLDLASTSCKTSLGPRDEHASCWFICFVASLVQLA 112
           +   VFQQY+AT LLCCLDLAS SCKTSLG R EHASCWFIC VASLV LA
Sbjct: 61  KI-EVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFICLVASLVHLA 75

[Close]
BLAST of Cla97C05G093970 vs. TrEMBL
Match: tr|A0A0A0LCD7|A0A0A0LCD7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259710 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 57/111 (51.35%), Postives = 60/111 (54.05%), Query Frame = 0 

Query: 1   MVLKIQEDSALNRCVAFTFIHFLIIEKFILQDYLILLFVLMRFVVYGIGPHLGICFYGVP 60
           M LK+Q DSALNR                                      LGICF GV 
Sbjct: 1   MALKVQGDSALNRTTL-----------------------------------LGICFNGVL 60

Query: 61  EDGRVFQQYKATPLLCCLDLASTSCKTSLGPRDEHASCWFICFVASLVQLA 112
           +   VFQQY+AT LLCCLDLAS SCKTSLG R EHASCWFIC VASLV LA
Sbjct: 61  KI-EVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFICLVASLVHLA 75

The following BLAST results are available for this feature:
BLAST of Cla97C05G093970 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57721.12.7e-1751.35hypothetical protein Csa_3G259710 [Cucumis sativus][more]
BLAST of Cla97C05G093970 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LCD7|A0A0A0LCD7_CUCSA1.8e-1751.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259710 PE=4 SV=1[more]
BLAST of Cla97C05G093970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G093970 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G093970.1Cla97C05G093970.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G093970Csa3G259710Cucumber (Chinese Long) v2cuwmbB218
Cla97C05G093970CSPI03G20400Wild cucumber (PI 183967)cpiwmbB224
Cla97C05G093970CsaV3_3G020340Cucumber (Chinese Long) v3cucwmbB220
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G093970Silver-seed gourdcarwmbB0503
Cla97C05G093970Silver-seed gourdcarwmbB0795
Cla97C05G093970Cucumber (Gy14) v2cgybwmbB209
Cla97C05G093970Cucumber (Gy14) v1cgywmbB004
Cla97C05G093970Cucurbita maxima (Rimu)cmawmbB264
Cla97C05G093970Cucurbita maxima (Rimu)cmawmbB473
Cla97C05G093970Cucurbita moschata (Rifu)cmowmbB244
Cla97C05G093970Cucurbita moschata (Rifu)cmowmbB454
Cla97C05G093970Bottle gourd (USVL1VR-Ls)lsiwmbB329
Cla97C05G093970Bottle gourd (USVL1VR-Ls)lsiwmbB340
Cla97C05G093970Melon (DHL92) v3.6.1medwmbB431
Cla97C05G093970Melon (DHL92) v3.5.1mewmbB434
Cla97C05G093970Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G093970Watermelon (97103) v1wmwmbB208
Cla97C05G093970Wax gourdwgowmbB194