CsaV3_3G020340 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G020340
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 16392085 .. 16395824 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTTAAGGTTCAAGGGGACTCAGCTCTGAATCGGTATGTTGTTTTTTACTTTTATCCTTTTTTTCTTATTATTGAAACATTGAATTTACAGGTTTGAAATACAAAAACCTCCTCACACATCCTTTTTTACTAGTTGGCTACAAAAAAGAATGAGAACTCTGTCTAATAAAAACACCAAGATGACCTATGTTTGCCACGAACTATCAGAATTCCTCTTTTTTTTGGTAGAGCTTAAAGCGGCGGGGCTACTTTTACTGATTCGTTAGAAGTATTGTACAATCTGAAACTCAAAATTTTGAAGCTTTTGAATGCATAGGTTTTAGTTTTGGCTTTTGGGGACTGGGAATAGTTTCCGTTATCCATCTTATTAAATTTTACTTCAACTAACTCTTACAAAACTTACTTTTATATCACGGAAGGATGAGTCTACCAATCACTTCATCAAAGTGGAATTTATGTCTTTTAGGATTTCTTTTGATGATTTATTAAGGGGAAGTGTGAAAATTAAGGAAAGAGGGAGAATTGTGGTTCTATTTCGTTTCAACTGGTTTCGGCTATCTAGAATGAGGACTGTCTATAGTGTATGCTAGATAACTCCAAACATAACTTATTTTCAAAACGAACAAGGTATAACAATTATATATTTTGATCAGGTCACATATTATTGTTGGAGAAATCCTTTTCAGAGTTGTTGAAATTTTCTTTCACGATTTTAACTGGAGTGAAAATTAGTATTTTCTAAGGTGGGCAAATGAAGATTTTATGATCCTTCTTAAAAAAATTTCCCACGAAATGGACACTGCTTTCCTTTAACAAGAAGCAATAAATAAAAAAAGTCAGTTTCAAAATGTTGAGAGAATAAAAGAGACTAATGCTCAAAGATACAAATTTCAGGAGAGAATGAGAAAAGAACTGAACAAAATACAAAAAGAACCATTACAAACCCATCAAAGCACAAATTACAGAGTTGAGTTGAGACACTTTAATCAAGCAAGAAGTTGCTAGGAAGGAAGGATCAAAATTTAGCTGTGATTTATCCTTGTGGACACCATAGAAATTAAGAAAATGTTGTTCCTTTTTTTTTTTTTTTGTGTCAGTATGTGTGTTGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGAGGATAATGTACCAGACACTGAGGATTGAGAAGAGGTTAATAAAGTTATTGGCGATAGGAGGAAGGCTTGGAAAGACAACTAGAGAAGAAAAATTGGAGACGGGGTGATCAGTAAAATTATGAAGAAATTTGTGAGATGCGGAGAATAGAAAAACAATGGAGCAGAAAAATTGGAAAACTGATTAAAGGAAACATTGCAAGTCTTTCCATTAATGATTTCAAGTGGGAAATGGCTAATATTCTTACTAACACTCTGTTTTATAGTGGTTGGTACAACATTTGGTAACCTTTGAAGAACATGATTGATGAGGACAACATGCTGAATCTAGTTCGTCTTGGTATGGTATTTCATAAATTTGTGAGCAAAGCCTGCCCCACACGACCCTCTCTCCCCATAGTTGCCTCATTTCCGAGTTTGGATTTGACTAATCTAGTCACCTCTTCATTCACTGTCACTTTGCAAAGAGGTTTTAGAAGGAGATCTTCCTTTCTTTTGGTTGGTTCACTGCCCAACTGCCCAACCAAAAGACACTTATCACGCTCTCACTTATACTCACCGGTTATCCCTTTACAAAGCAAAAGAAAATCATGTGGATGCATAGATTCGTGCTTTCTTATGGATCACATGGAAGGGGAGAAACAAGTGCCTCTTCAAAGATAAGGGAAGCTCTTTTGATTGATATTTTGGAGTCTGATTCTATGTTCTCAATATCTTTCATGCTATGAGTTGGTGTAAATGCACATCTTTCTTTAATACATACACCCTTTTTTCCCTTTTTGACCAATTGGAGAAATCTTTCACAACTCCTCTAGCTGTCTTCAGCCCTTTTTTGTTCAAGGCAGACTATGAAATATTTGGGAAGAAAATTTCTATTAAGCTCTCTTTTTTTTCTTATTTAAATAAGTAGATTCTCACCTTTTTCACTTTTTTCTTTATATCAGTGAGTATCGATGTGAACCTATGCACACCTTGACTGATCTCACAGTATGACCTGTCTGATTCTATAATATTTGGGTGTTAAAACAAACTCATAGGATATTAATTACTAAGTAAATGACCACCATGGACTCAACGACCTCTAAGCTCTTTATTGAAACAATGTCTCTTTTTTACCACTAGGTTAACCATGATTGTTTATCCCGTTTCTTTTATGAAAGACCGTCAAGTTGCTGATATTCTTATGCATTCAGGGAGCTCTCTATCTCGTTCATTTGGGTTCATCTAGTACGACAGAGAAACAAAGGTTTTGACACTTTGTTCTTTACTAGAAGAGGTTTTTCTTGTAGATCATTGTTCCATTTTTTTTACTGGATTCCTCTCCTAAGGATTTGATTTTCTTGCTCATTTGGAAAGTGGATCCTAAAATAAGGTGAAGTTCTTGTTTCGGGATAAAAGGGAGAGTTTTGTGATGATTTTTCCCCTTCAATTTGTTGATAATGTGGTGAGAAGGGGCTGAGATACTTCAGAAGGTTATGTGGTTGGTTATATACTCATGTGGTCACTATACCCTTACATGTACCATTTATTCTTGTTCAAGAACCATTGATCAATACGGAACAGAATACAATGCTGAATGTCTTAGCTGTTTTATCATTGCTCTCCCATTTTCACCTTAGGCTCGAGATGGGGATGTCCACCTTCGGACTTGTTCGTCCATAATTTTTCTGTTTATCTTTTTTTCTAGACAACCCACCCTTCTCGGGAGTCTGATTCTATGTTCTCAATATGGAATGTAAAAATTCTGAATAACGTAGAGTTCTTTGGGTGACAAATTTTACATGGATTAGTTGGATCGGATCTTGACCAGAGAACCATAGGGAACCTAGATCCGATCATGTGAATTTGTGAGTATACTCTGCAGTCTGGCATGAGTTCTTTGAGGTGTTCAATTTTGAGCTTTGTTTGCTCTTAAAGTTGCAGGAAGTCAGGCGAGTAGCTTATCGTCCATATGCCATTTTGTGAAAAGATATGGCTGTTTTTGTGGCAGGCTTGGATGTTTGCTATTTTATGGGGGTTGAGGGGTGAAGAAATAAAAGAATTTTCATTGGATGTGAGGATTCTTATAGTGCGAATTTTGTTCTCTTGCTAGATTCTCTAGGCTTTGATTTTCAAGTTTCTTTTTTTTTTTTTTTCCCTCCGTCGTTATGTCATATTTCTCTTATTGGAACCCTTTTTTGTAGTTTGACTCCCTTTCCTGAGTTTTAAATTTTGCAAGTCCGTGTGTTCTTTTTTTTTTTTTTTTTTCTCTTCTTAATGAAAGTTAAGTTGATTATTTTGAGAGATGCAAATTCGTATCCAAATTAACTAACTTTTGCTCCAATATAAGTTTCCAAGCTCCCTGACTTCATCGCAAAAGGATTATGTAATATTGTTGTTTGTGCATTGAGATTTGTGGTATATGCCATAGGACCACACTCTTGGGAATTTGCTTTAATGGAGTTCTGAAGATTGAAGTCTTTCAACAGTATGAAGCTACCGCCTTGTTGTGTTGCCTTGACCTCGCATCCATGAGCTGCAAGACAAGTTTGGGGTCAAGGAGCGAGCATGCTAGCTGTTGGTTCATCTGTTTAGTTGCATCGTTGGTTCATCTTGCATAA

mRNA sequence

ATGGCGCTTAAGGTTCAAGGGGACTCAGCTCTGAATCGGACCACACTCTTGGGAATTTGCTTTAATGGAGTTCTGAAGATTGAAGTCTTTCAACAGTATGAAGCTACCGCCTTGTTGTGTTGCCTTGACCTCGCATCCATGAGCTGCAAGACAAGTTTGGGGTCAAGGAGCGAGCATGCTAGCTGTTGGTTCATCTGTTTAGTTGCATCGTTGGTTCATCTTGCATAA

Coding sequence (CDS)

ATGGCGCTTAAGGTTCAAGGGGACTCAGCTCTGAATCGGACCACACTCTTGGGAATTTGCTTTAATGGAGTTCTGAAGATTGAAGTCTTTCAACAGTATGAAGCTACCGCCTTGTTGTGTTGCCTTGACCTCGCATCCATGAGCTGCAAGACAAGTTTGGGGTCAAGGAGCGAGCATGCTAGCTGTTGGTTCATCTGTTTAGTTGCATCGTTGGTTCATCTTGCATAA

Protein sequence

MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHASCWFICLVASLVHLA
BLAST of CsaV3_3G020340 vs. NCBI nr
Match: KGN57721.1 (hypothetical protein Csa_3G259710 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.5e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0

Query: 1  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHA 60
          MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHA
Sbjct: 1  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHA 60

Query: 61 SCWFICLVASLVHLA 76
          SCWFICLVASLVHLA
Sbjct: 61 SCWFICLVASLVHLA 75

BLAST of CsaV3_3G020340 vs. TrEMBL
Match: tr|A0A0A0LCD7|A0A0A0LCD7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259710 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.7e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0

Query: 1  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHA 60
          MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHA
Sbjct: 1  MALKVQGDSALNRTTLLGICFNGVLKIEVFQQYEATALLCCLDLASMSCKTSLGSRSEHA 60

Query: 61 SCWFICLVASLVHLA 76
          SCWFICLVASLVHLA
Sbjct: 61 SCWFICLVASLVHLA 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57721.12.5e-34100.00hypothetical protein Csa_3G259710 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LCD7|A0A0A0LCD7_CUCSA1.7e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259710 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020340.1CsaV3_3G020340.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G020340CSPI03G20400Wild cucumber (PI 183967)cpicucB144
CsaV3_3G020340ClCG05G012060Watermelon (Charleston Gray)cucwcgB241
CsaV3_3G020340Cla97C05G093970Watermelon (97103) v2cucwmbB220
The following gene(s) are paralogous to this gene:

None