Cla97C05G093600 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G093600
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	B3 domain-containing protein
Location	Cla97Chr05 : 13024886 .. 13025597 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTGTAAGTTCTTCATTCCTTTACAGTTTTCCATTCCAAAAACCATTACAAAAACAACTCTTAAAACCTTGCTCTTTTACCATCTATTACCCATAAATACTCATGCTACTCTTTTTGGGCTGTAGTTCATTTTCGTCTCTTACTTTTCACTTTAAATTCAATTTATATAATCTTTTTGTACTTTCAAAACATGTATTTTCGTTTTGTAATTTCATTCATTTTAATATTTTTACCTTTCAAGGTTTCAACTTTTTGACATCATCAAATCACTAACCTAACAATGATATAACTATTTCATTATTTGTAGTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGACTAG

mRNA sequence

ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGACTAG

Coding sequence (CDS)

ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGACTAG

Protein sequence

MEPPQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYYGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKFSGETKDIPIIID

Homology

[Close]

BLAST of Cla97C05G093600 vs. NCBI nr
Match: XP_022974195.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974197.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975683.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975684.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022975685.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 8.2e-52
Identity = 97/132 (73.48%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ LP KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS++LKFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVLKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of Cla97C05G093600 vs. NCBI nr
Match: XP_022941967.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_022941973.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata])

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 96/132 (72.73%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ LP KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFLPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS+++KFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of Cla97C05G093600 vs. NCBI nr
Match: XP_023539026.1 (B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.1 bits (536), Expect = 2.4e-51
Identity = 95/132 (71.97%), Postives = 109/132 (82.58%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQN  ILPL GK YH  ILSKSH  PI N+ +P KFHSVLPA+MIP  + C  K WKIDY
Sbjct: 16  PQNSRILPLSGKPYHGVILSKSHVAPICNMFMPAKFHSVLPAIMIPAVLYCEGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR KALD KQW+KFVNDN LKCGDACVFEL+ECSS+++KFRVQILRG IPF+LH KF
Sbjct: 76  YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIECSSSVIKFRVQILRGDIPFELHEKF 135

Query: 124 SGETKDIPIIID 136
           SGE+++ PI+ID
Sbjct: 136 SGESRNTPILID 147

[Close]

BLAST of Cla97C05G093600 vs. NCBI nr
Match: XP_011650806.1 (PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus] >KGN56625.1 hypothetical protein Csa_3G126890 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQNGE +PL GK YH FILSKSH  PIYN+ LP KFHS+LPA++IP  +LC  K WKIDY
Sbjct: 16  PQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           +GNRR KALD KQW+KFVNDN LK GDA VFELLECSS++LKFRVQIL G IP +LH KF
Sbjct: 76  HGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRVQILSGDIPLELHDKF 135

Query: 124 SGETKDIPIIID 136
           SGETK+ PI +D
Sbjct: 136 SGETKETPIHLD 147

[Close]

BLAST of Cla97C05G093600 vs. NCBI nr
Match: XP_022147119.1 (B3 domain-containing protein Os04g0386900-like [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 3.9e-46
Identity = 89/132 (67.42%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           P+N EI PL  K +H  IL+KSH  PIYN+ LP KFHSVLPA++I   + CG K W +DY
Sbjct: 16  PRNYEIFPLSDKPFHGVILAKSHVAPIYNMTLPAKFHSVLPAIVIHGVLYCGGKEWTVDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           YGNRR K+LD + W+KFVNDN LK GDACVFEL+ECSS+ LKFRVQILRG IP QLH KF
Sbjct: 76  YGNRRGKSLDTRHWRKFVNDNHLKSGDACVFELMECSSSTLKFRVQILRGDIPVQLHDKF 135

Query: 124 SGETKDIPIIID 136
           SGE+KD PI ID
Sbjct: 136 SGESKDTPIKID 147

[Close]

BLAST of Cla97C05G093600 vs. TrEMBL
Match: tr|A0A0A0L3V3|A0A0A0L3V3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 4   PQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDY 63
           PQNGE +PL GK YH FILSKSH  PIYN+ LP KFHS+LPA++IP  +LC  K WKIDY
Sbjct: 16  PQNGETMPLSGKPYHAFILSKSHVAPIYNLVLPAKFHSILPAIVIPAVLLCRGKKWKIDY 75

Query: 64  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 123
           +GNRR KALD KQW+KFVNDN LK GDA VFELLECSS++LKFRVQIL G IP +LH KF
Sbjct: 76  HGNRRGKALDSKQWRKFVNDNCLKSGDAIVFELLECSSSILKFRVQILSGDIPLELHDKF 135

Query: 124 SGETKDIPIIID 136
           SGETK+ PI +D
Sbjct: 136 SGETKETPIHLD 147

[Close]

BLAST of Cla97C05G093600 vs. TrEMBL
Match: tr|A0A2R6RD19|A0A2R6RD19_ACTCH (B3 domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07723 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 63/132 (47.73%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 5   QNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAI-LCGEKVWKIDY 64
           ++ E  PL GK Y    + KSH  P+Y +  P K +S+LP   +P  +  CG+K W++ Y
Sbjct: 52  EDDEFWPLSGKPYFHVFVVKSHLKPLYQLVFPKKMYSLLPCSRVPVVLTYCGKK-WEMVY 111

Query: 65  YGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKF 124
           YG+   K  D + WK F  DN LK GDACVFE++E SS+ LKFRVQILRG  P QL  + 
Sbjct: 112 YGDSNPKRFD-RNWKNFAIDNDLKLGDACVFEIVEISSSNLKFRVQILRGEFPSQLMERV 171

Query: 125 SGETKDIPIIID 136
            GE  D PII+D
Sbjct: 172 KGEASDTPIIVD 181

[Close]

BLAST of Cla97C05G093600 vs. TrEMBL
Match: tr|A0A2P6RZ46|A0A2P6RZ46_ROSCH (Putative transcription factor B3-Domain family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0147401 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-26
Identity = 60/128 (46.88%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 8   EILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYYG-N 67
           E  PL GK Y   IL+K+H  P Y + +P K H +LP+   PT +    K W++   G N
Sbjct: 19  EFWPLSGKPYFDIILAKTHVKPYYKLGIPAKLHPILPSCSFPTVLTFAGKSWEMTCDGSN 78

Query: 68  RRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKFSGE 127
           ++ K LD + WK F++DN LK GD CVFE++ECSST L  RVQILRG IP +L  K  G+
Sbjct: 79  KKHKGLDKESWKAFIDDNNLKAGDGCVFEVMECSSTKLVLRVQILRGDIPAELLEKEKGD 138

Query: 128 TKDIPIII 135
             + PII+
Sbjct: 139 EAEKPIIL 146

[Close]

BLAST of Cla97C05G093600 vs. TrEMBL
Match: tr|F6I5F3|F6I5F3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0024g00930 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 61/131 (46.56%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 5   QNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYY 64
           Q  EI PLLGK Y   +L KSH   +  + LPTK H  +P+ +IP  ++  +K W++ + 
Sbjct: 64  QADEIHPLLGKPYFHVVLVKSH---LNQMVLPTKMHPSVPSAVIPAVLVHQDKRWEMTFN 123

Query: 65  GNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKFS 124
           G+ R+       W+ FVNDN LK GDACVFEL+EC+++ +KFRVQILRG IP  L  + +
Sbjct: 124 GDHRTHKRFDIGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRAN 183

Query: 125 GETKDIPIIID 136
           GET D  I+I+
Sbjct: 184 GETSDTAIVIE 191

[Close]

BLAST of Cla97C05G093600 vs. TrEMBL
Match: tr|A5AIM5|A5AIM5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020729 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-25
Identity = 61/131 (46.56%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 5   QNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYY 64
           Q  EI PLLGK Y   +L KSH   +  + LPTK H  +P+ +IP  ++   K W++ + 
Sbjct: 33  QADEIHPLLGKPYFHVVLVKSH---LNQMVLPTKMHPSVPSAVIPAVLVHQXKRWEMTFN 92

Query: 65  GNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKFS 124
           G+ R+       W+ FVNDN LK GDACVFEL+EC+++ +KFRVQILRG IP  L  + +
Sbjct: 93  GDHRTHKRFDIGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRAN 152

Query: 125 GETKDIPIIID 136
           GET D  I+I+
Sbjct: 153 GETSDTAIVIE 160

[Close]

BLAST of Cla97C05G093600 vs. Swiss-Prot
Match: sp|Q7XLP4|Y4869_ORYSJ (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0386900 PE=2 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 9.0e-18
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 9   ILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYYGNRR 68
           +LPLLGK Y   I+ KSH  P + + +P  F  +LP+   P  +    + W + + G R 
Sbjct: 84  VLPLLGKPYFTCIMCKSHVQPPFQVVVPRSFAPLLPSRTTPATLSWRGRSWGMRFTGGRL 143

Query: 69  SKALDPKQWKKFVNDNGLKCGDACVFELL---ECSSTLLKFRVQILRGHIPFQLHHKFSG 128
            + L+   W+ F  DN L+ GD CVFELL         ++FRVQ+LR  IP ++  +  G
Sbjct: 144 IQRLE-AGWRGFAVDNDLRLGDGCVFELLVGGGGEQERVEFRVQVLRAEIPARIRGRAGG 203

Query: 129 ETKDIPIIID 136
            T   PI+ID
Sbjct: 204 YTSATPIVID 212

[Close]

BLAST of Cla97C05G093600 vs. Swiss-Prot
Match: sp|Q9LHY9|Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-12
Identity = 45/124 (36.29%), Postives = 65/124 (52.42%), Query Frame = 0


Query: 14  GKLYHPFILSKSHAPPIYNICLPTKFHSVL--PALMIPTAILCGEKVWKIDYYGNRRSKA 73
           G  +   +++KSH  P + + +P +F   L  P       +  G K W   Y G+ + K 
Sbjct: 52  GNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKK 111

Query: 74  LDPKQWKKFVNDNGLKCGDACVFELLECSST-LLKFRVQILRGHIPFQLHHKFSGETKDI 133
           LD   W +F  DN L  GDACVFEL+   +   L+F+VQILRG +P ++     G T D 
Sbjct: 112 LD-AGWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTS-KGLTSDQ 171

Query: 134 PIII 135
           PI+I
Sbjct: 172 PILI 173

[Close]

BLAST of Cla97C05G093600 vs. TAIR10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 44.3 bits (103), Expect = 7.0e-05
Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 0


Query: 60  KIDYYGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRG 114
           K + +G R S  +    WKKFV DN L+ GD CVFE     +  L   V I RG
Sbjct: 268 KFNIFGARGSGGIS-TGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRG 320

The following BLAST results are available for this feature:

BLAST of Cla97C05G093600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974195.1	8.2e-52	73.48	B3 domain-containing protein Os04g0386900-like [Cucurbita maxima] >XP_022974196....	[more]
XP_022941967.1	1.4e-51	72.73	B3 domain-containing protein Os04g0386900-like [Cucurbita moschata] >XP_02294197...	[more]
XP_023539026.1	2.4e-51	71.97	B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]	[more]
XP_011650806.1	2.0e-50	71.97	PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus] >KGN...	[more]
XP_022147119.1	3.9e-46	67.42	B3 domain-containing protein Os04g0386900-like [Momordica charantia]	[more]

BLAST of Cla97C05G093600 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3V3\|A0A0A0L3V3_CUCSA	1.3e-50	71.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126890 PE=4 SV=1	[more]
tr\|A0A2R6RD19\|A0A2R6RD19_ACTCH	1.0e-26	47.73	B3 domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN...	[more]
tr\|A0A2P6RZ46\|A0A2P6RZ46_ROSCH	1.8e-26	46.88	Putative transcription factor B3-Domain family OS=Rosa chinensis OX=74649 GN=Rch...	[more]
tr\|F6I5F3\|F6I5F3_VITVI	1.5e-25	46.56	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0024g00930 PE=4 SV=...	[more]
tr\|A5AIM5\|A5AIM5_VITVI	3.3e-25	46.56	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_020729 PE=4 SV=1	[more]

BLAST of Cla97C05G093600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7XLP4\|Y4869_ORYSJ	9.0e-18	36.92	B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q9LHY9\|Y6112_ORYSJ	1.9e-12	36.29	B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Cla97C05G093600 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33280.1	7.0e-05	42.59	AP2/B3-like transcriptional factor family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015300	DNA-bd_pseudobarrel_sf
IPR003340	B3_DNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G093600.1	Cla97C05G093600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 56..102 e-value: 4.6E-9 score: 36.0
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 57..114 score: 9.911
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 21..112 e-value: 2.08015E-13 score: 60.8045
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 17..114 e-value: 2.3E-13 score: 51.9
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 20..109
None	No IPR available	PANTHER	PTHR31391:SF15	SUBFAMILY NOT NAMED	coord: 8..134
None	No IPR available	PANTHER	PTHR31391	FAMILY NOT NAMED	coord: 8..134

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G093600	Cla013223	Watermelon (97103) v1	wmwmbB206
Cla97C05G093600	ClCG05G011530	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G093600	Lsi05G003630	Bottle gourd (USVL1VR-Ls)	lsiwmbB329

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G093600	Silver-seed gourd	carwmbB0503
Cla97C05G093600	Silver-seed gourd	carwmbB0795
Cla97C05G093600	Cucumber (Gy14) v2	cgybwmbB201
Cla97C05G093600	Cucumber (Gy14) v2	cgybwmbB209
Cla97C05G093600	Cucurbita maxima (Rimu)	cmawmbB264
Cla97C05G093600	Cucurbita maxima (Rimu)	cmawmbB473
Cla97C05G093600	Cucurbita moschata (Rifu)	cmowmbB244
Cla97C05G093600	Cucurbita moschata (Rifu)	cmowmbB454
Cla97C05G093600	Wild cucumber (PI 183967)	cpiwmbB213
Cla97C05G093600	Wild cucumber (PI 183967)	cpiwmbB224
Cla97C05G093600	Cucumber (Chinese Long) v3	cucwmbB212
Cla97C05G093600	Cucumber (Chinese Long) v3	cucwmbB220
Cla97C05G093600	Cucumber (Chinese Long) v2	cuwmbB209
Cla97C05G093600	Cucumber (Chinese Long) v2	cuwmbB218
Cla97C05G093600	Melon (DHL92) v3.6.1	medwmbB424
Cla97C05G093600	Melon (DHL92) v3.6.1	medwmbB437
Cla97C05G093600	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G093600	Melon (DHL92) v3.5.1	mewmbB444
Cla97C05G093600	Wax gourd	wgowmbB194