ClCG05G011530 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTGTAAGTTCTTCATTCCTTTACAGTTTTCCATTCCAAAAACCATTACAAAAACAACTCTTAAAACCTTGCTCTTTTACCATCTATTACCCATAAATACTCATGCTACTCTTTTTGGGCTGTAGTTCATTTTCGTCTCTTACTTTTCACTTTAAATTCAATTTATATAATCTTTTTGTACTTTCAAAACATGTATTTTCGTTTTGTAATTTCATTCATTTTAATATTTTTACCTTTCAAGGTTTCAACTTTTTGACATCATCAAATCACTAACCTAACAATGATATAACTATTTCATTATTTGTAGTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGAC ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGAC ATGGAGCCGCCGCAAAATGGTGAAATTTTGCCACTTTTAGGCAAACTCTACCATCCTTTTATTCTTTCTAAATCGCATGCCCCTCCCATTTACAATATTTGTTTGCCAACAAAATTTCACTCTGTTTTACCTGCTCTTATGATCCCTACGGCTATTTTGTGTGGGGAAAAGGTATGGAAGATAGATTATTATGGGAACAGACGCAGTAAAGCACTTGATCCCAAACAATGGAAGAAGTTTGTTAATGATAATGGTTTAAAGTGTGGAGATGCTTGCGTATTTGAGCTCTTGGAATGTAGCAGCACTTTACTCAAATTCAGAGTTCAAATTCTTAGAGGTCACATCCCTTTCCAGCTGCACCACAAGTTCAGTGGAGAAACTAAGGACATCCCTATAATTATCGAC MEPPQNGEILPLLGKLYHPFILSKSHAPPIYNICLPTKFHSVLPALMIPTAILCGEKVWKIDYYGNRRSKALDPKQWKKFVNDNGLKCGDACVFELLECSSTLLKFRVQILRGHIPFQLHHKFSGETKDIPIIID
BLAST of ClCG05G011530 vs. Swiss-Prot
Match: Y4869_ORYSJ (B3 domain-containing protein Os04g0386900 OS=Oryza sativa subsp. japonica GN=Os04g0386900 PE=2 SV=3) HSP 1 Score: 87.8 bits (216), Expect = 9.8e-17 Identity = 48/130 (36.92%), Postives = 68/130 (52.31%), Query Frame = 1
BLAST of ClCG05G011530 vs. Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11 Identity = 45/124 (36.29%), Postives = 63/124 (50.81%), Query Frame = 1
BLAST of ClCG05G011530 vs. TrEMBL
Match: A0A0A0L3V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126890 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.4e-49 Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 1
BLAST of ClCG05G011530 vs. TrEMBL
Match: F6I5F3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0024g00930 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-24 Identity = 61/131 (46.56%), Postives = 85/131 (64.89%), Query Frame = 1
BLAST of ClCG05G011530 vs. TrEMBL
Match: A5AIM5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020729 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.4e-24 Identity = 61/131 (46.56%), Postives = 84/131 (64.12%), Query Frame = 1
BLAST of ClCG05G011530 vs. TrEMBL
Match: A0A059C4K6_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_E01753 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23 Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 1
BLAST of ClCG05G011530 vs. TrEMBL
Match: M5X861_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025386mg PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.2e-23 Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = 1
BLAST of ClCG05G011530 vs. NCBI nr
Match: gi|778677528|ref|XP_011650806.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 2.0e-49 Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 1
BLAST of ClCG05G011530 vs. NCBI nr
Match: gi|694428103|ref|XP_009341640.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like isoform X2 [Pyrus x bretschneideri]) HSP 1 Score: 127.5 bits (319), Expect = 1.8e-26 Identity = 65/131 (49.62%), Postives = 81/131 (61.83%), Query Frame = 1
BLAST of ClCG05G011530 vs. NCBI nr
Match: gi|657949831|ref|XP_008345126.1| (PREDICTED: B3 domain-containing protein Os06g0112300-like [Malus domestica]) HSP 1 Score: 125.2 bits (313), Expect = 8.8e-26 Identity = 64/131 (48.85%), Postives = 81/131 (61.83%), Query Frame = 1
BLAST of ClCG05G011530 vs. NCBI nr
Match: gi|470135893|ref|XP_004303740.1| (PREDICTED: B3 domain-containing protein Os04g0386900-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 123.6 bits (309), Expect = 2.6e-25 Identity = 60/127 (47.24%), Postives = 79/127 (62.20%), Query Frame = 1
BLAST of ClCG05G011530 vs. NCBI nr
Match: gi|225436198|ref|XP_002267731.1| (PREDICTED: B3 domain-containing protein Os04g0386900 [Vitis vinifera]) HSP 1 Score: 120.2 bits (300), Expect = 2.8e-24 Identity = 61/131 (46.56%), Postives = 85/131 (64.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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